g.arboreum_cottongen_reftransV1_0010658, g.arboreum_cottongen_reftransV1_0010658 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0010658
Unique Nameg.arboreum_cottongen_reftransV1_0010658
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1610
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr12chromosomeg.arboreum_cottongen_reftransV1_0010658:1..1610 .
Chr12:93308985..93312066 +
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A067L8T8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24523 PE=4 SV=1)

HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0
Identity = 320/406 (78.82%), Postives = 357/406 (87.93%), Query Frame = -2 
Query:  392 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVH 1609
            NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS TIRNVRLSCCVAGHIKVT+AGEDIQETMDILV  GLDP+SE YA IKY L YGGNCQRCNEWCRLP+VTPC HLLCLDCVGLDS+ CT  GCG LYEMQ+PE L RPENPNPKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKV+YL++RLKALQ+ N+E   S++E+D AK+I++ + PS   D    LL +  R  ++S K   EKV+IFSQFLEHIHVIEQQLTFAGIKFAG+YSPMHS NKMK+LA FQ+D +CMALLMDGSAALGLDLSFV+HVFLMEPIWDRSMEEQVISRAHRMGATRPI VETLAMRGTIEE+M+EFLQD D CR+ +KEE ++  H+G+RP R+LHDFAE NYLARLSFVH
Sbjct:  935 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIRNVRLSCCVAGHIKVTDAGEDIQETMDILVAKGLDPVSENYALIKYYLQYGGNCQRCNEWCRLPVVTPCGHLLCLDCVGLDSERCTFSGCGELYEMQSPEILTRPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVSYLVQRLKALQDANRECLSSINEND-AKNIEQ-IHPSVMGDSSA-LLQDCCRQSSKSSKSALEKVIIFSQFLEHIHVIEQQLTFAGIKFAGLYSPMHSSNKMKALASFQHDATCMALLMDGSAALGLDLSFVSHVFLMEPIWDRSMEEQVISRAHRMGATRPIQVETLAMRGTIEERMLEFLQDGDDCRRLVKEEFEKLDHQGTRPHRSLHDFAERNYLARLSFVH 1337
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: F6I5R7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03330 PE=4 SV=1)

HSP 1 Score: 659.448 bits (1700), Expect = 0.000e+0
Identity = 311/395 (78.73%), Postives = 348/395 (88.10%), Query Frame = -2 
Query:  425 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAE 1609
            NELVVTVRRNILMADWNDPSHVESLLNPKQWKFR +TI+NVRLSCCVAGHIKVT+AGEDIQETMDILVENGLD +S+EYAFIKYNLLYGG C RC EWCRLP++TPCRHLLCLDCV LDS+ CT PGCG+LYEMQ+PE L RPENPNPKWPVPKDLIELQPSYKQD W+PDWQSTSSSKV Y+++RLKALQE N++   +MDED + K ID+ +  S++++    L  +++RL +E+  + PEKVLIFSQFLEHIHVIEQQLT AGIKF+GMYSPMHS NKMKSL+ FQ+D  CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPI VETLAMRGTIEEQM+EFLQDAD CR+FLKEE  +   EG R  R+LHDFAE
Sbjct:  885 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRISTIKNVRLSCCVAGHIKVTDAGEDIQETMDILVENGLDTISDEYAFIKYNLLYGGACMRCKEWCRLPVITPCRHLLCLDCVALDSEKCTFPGCGNLYEMQSPEILTRPENPNPKWPVPKDLIELQPSYKQDTWDPDWQSTSSSKVTYIVKRLKALQEANRKSGYAMDEDSDIKDIDELVSLSEQNNCNALLQQDYTRLNDETSHISPEKVLIFSQFLEHIHVIEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQDADECRRFLKEEFGKPYSEGVRAHRSLHDFAE 1279
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A0A0KTQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623770 PE=4 SV=1)

HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0
Identity = 302/406 (74.38%), Postives = 339/406 (83.50%), Query Frame = -2 
Query:  395 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLL-LNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFV 1609
            NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS TI+N+RLSCCVAGHIKV EAGEDIQETMDILV++GLDP+S+EY+++KYNLLYGG+C RC EWCRLP++ PCRHLLCLDCV LDS+ CT PGCG LY MQTPETLARPENPNPKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKVAYL+ERLK L E N E                 L PS  +  G  L  ++HSR      +++ +KVLIFSQFLEHIHVIEQQLT AGI+FAGMYSPMH+ NKMKSLAMFQ+D SCM LLMDGSAALGLDLSFVT+VFLMEPIWDRSMEEQVISRAHRMGA RPIHVETL M  TIEEQM++FLQD D C++ +KEE  +  +EG R  R+LHDFA SNYL++L FV
Sbjct:  962 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSYLKYNLLYGGSCSRCGEWCRLPVIAPCRHLLCLDCVALDSEGCTFPGCGKLYVMQTPETLARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVAYLIERLKDLSETNNEA--------------ALLPPSSLTKSGALLQEVDHSRAITSDHEIVRDKVLIFSQFLEHIHVIEQQLTIAGIRFAGMYSPMHASNKMKSLAMFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETIEEQMVQFLQDPDECKRLMKEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFV 1353
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: K4D4D8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g005250.1 PE=4 SV=1)

HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0
Identity = 301/416 (72.36%), Postives = 344/416 (82.69%), Query Frame = -2 
Query:  383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDE---DDEAKH----IDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNS 1609
            NELV TVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHI+VTEAG+DIQETMDILVE+GLDP SEEY  IKY++L+GGNC RC  WCRLP++TPC+HLLCLDCV LDS+ CT+ GCG+LYEMQ+PETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYL+ RLK ++E N+ +  S ++   +    H    I+ F   S +  +  P         N+ C + P+KV+IFSQFLEHIHVIEQQL  AGI FA +YSPM S +K+K+L  FQ+D  CMALLMDGSAALGLDLSFVTHV+LMEPIWD+SMEEQVISRAHRMGATRPI VETLAM GTIEEQMM+FLQ+AD  R+ LKEE  + GH+G+R  RTLHDFAESNYL RL+FV  +S
Sbjct:  930 NELVETVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIRVTEAGDDIQETMDILVEDGLDPTSEEYGLIKYHILFGGNCMRCKAWCRLPVITPCKHLLCLDCVSLDSEKCTISGCGNLYEMQSPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLVGRLKEIKEANRMIIISNEDKIVETSVSHVHTRINNFSMFSSQQYLVGP--------ANDFCNINPQKVIIFSQFLEHIHVIEQQLAIAGISFASLYSPMPSISKVKALLTFQHDVDCMALLMDGSAALGLDLSFVTHVYLMEPIWDKSMEEQVISRAHRMGATRPILVETLAMSGTIEEQMMKFLQEADEGRRLLKEEYGKLGHDGARAPRTLHDFAESNYLTRLNFVRTSS 1337
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: W9RB23_9ROSA (F-box protein OS=Morus notabilis GN=L484_023953 PE=4 SV=1)

HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0
Identity = 302/418 (72.25%), Postives = 337/418 (80.62%), Query Frame = -2 
Query:  386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQ----------DDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609
            NEL VTVRRNILMADWND SHVESLLNPKQWKFRSTTI+N+RLSCCVAGHIKVT+AG+DIQETMD LVENGLDP SEEYAFIKYNLL GGNC RC EWCRLP++TPCRHLLCLDCV LDS+ CT PGCG+LYEMQTP+TLARPENPNPKWPVPKDLIELQPSYKQ          D+W+PDWQSTSSSKVAYL+  LK LQ+ N EV+   D+  + K+I   LC S                 N +     +K L+FSQFLEHIHVIEQQLT AGIKFAGMYSPMHS NKMKSL  FQ D++CM LLMDGSAALGLDLSFV+HVFLMEPIWD+SMEEQVISRAHRMGATRPI+VETLAMR TIEEQM+ FLQDA   R+ LK+E  ++  EG+R  R+LHDFA +NYL++L FV  N
Sbjct:  959 NELAVTVRRNILMADWNDHSHVESLLNPKQWKFRSTTIKNIRLSCCVAGHIKVTDAGQDIQETMDALVENGLDPTSEEYAFIKYNLLDGGNCVRCGEWCRLPVITPCRHLLCLDCVALDSERCTYPGCGNLYEMQTPDTLARPENPNPKWPVPKDLIELQPSYKQARVAYTLCIPDNWDPDWQSTSSSKVAYLIHSLKELQDANNEVQPPKDDGTDVKNIQGLLCQSWTR--------------NSNINTHKDKFLVFSQFLEHIHVIEQQLTIAGIKFAGMYSPMHSSNKMKSLTTFQNDETCMVLLMDGSAALGLDLSFVSHVFLMEPIWDKSMEEQVISRAHRMGATRPIYVETLAMRSTIEEQMVAFLQDATERRRLLKKEFGKTNSEGARTHRSLHDFAVNNYLSQLRFVRTN 1362
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: B9GWX1_POPTR (SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0003s19730g PE=4 SV=2)

HSP 1 Score: 622.468 bits (1604), Expect = 0.000e+0
Identity = 305/409 (74.57%), Postives = 334/409 (81.66%), Query Frame = -2 
Query:  383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNS 1609
            NELVVTVRRNIL ADWNDPSHVESLLNPKQWKFRST IRNVRLSCCVAGHIKV E GEDIQETMDIL+E GLDP+SEE+A IKY L YGGNC RC EWCRLP +TPCRHLLCLDCV L+S+ CT PGCG+ YEMQ+PE L RPENPNPKWPVPKDLIELQPSYKQ     +WQSTSSSKVAYL+++LKALQE ++E   S+D+D +                   L+L           M  EKV+IFSQFLEHIHVIEQQL FAGIKFAGMYSPM   NKMKSLA FQ+D +CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPI+VETLAMRGTIEEQM+EFLQDAD CR+ LKEES ++ H G+R  R+LHDFAES+YLA LSFVH  S
Sbjct:  943 NELVVTVRRNILTADWNDPSHVESLLNPKQWKFRSTLIRNVRLSCCVAGHIKVAEVGEDIQETMDILIEKGLDPISEEHALIKYYLQYGGNCLRCKEWCRLPFITPCRHLLCLDCVALNSEKCTFPGCGYSYEMQSPEVLTRPENPNPKWPVPKDLIELQPSYKQ----ANWQSTSSSKVAYLVQKLKALQEASRESSWSIDKDTQIS--------------VSSLVLQQDCFSVNRAAM--EKVIIFSQFLEHIHVIEQQLAFAGIKFAGMYSPMPQINKMKSLATFQHDATCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLEFLQDADGCRRVLKEESSKTDHAGARLHRSLHDFAESDYLAHLSFVHTGS 1331
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A022RE03_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a000272mg PE=4 SV=1)

HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0
Identity = 296/411 (72.02%), Postives = 339/411 (82.48%), Query Frame = -2 
Query:  383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNH-SRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGS-RPCRTLHDFAESNYLARLSFVHRNS 1609
            NELV TVRRNILMADWND SHVESLLNPKQWKFR+ TI+NVRLSCCVAGH++VT+AG+DIQETMDILVENGLDP+S+EY +IKY++ YGG+C RC EWCRLP++TPC+HL+CLDCV LDS+ CT PGCG+ YEMQ+PE LARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKV YL+ RLK LQE N+ +    D   E          S RS   + L  +   +L N   ++  EKV++FSQFLEHIH+IEQQL+ AGI+FAGMYSPMHS NKMKSLA FQ+D +CM LLMDGSAALGLDLSFV HV+LMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM GTIEEQM++FLQD + CR+ LKEE   +  +G+ R   TLHDFAESNYLA LSFV  +S
Sbjct:  908 NELVETVRRNILMADWNDSSHVESLLNPKQWKFRANTIKNVRLSCCVAGHVRVTDAGQDIQETMDILVENGLDPMSQEYGWIKYSISYGGDCMRCKEWCRLPVITPCKHLMCLDCVALDSERCTFPGCGNSYEMQSPEELARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVTYLVRRLKELQETNR-MTGYADVSSELNF------SSNRSYFDISLDQDACHKLKNGWSQIPLEKVIVFSQFLEHIHIIEQQLSIAGIQFAGMYSPMHSSNKMKSLATFQHDANCMVLLMDGSAALGLDLSFVNHVYLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMNGTIEEQMLKFLQDGNECRRLLKEEFATNTPDGTQRSFHTLHDFAESNYLAHLSFVRTSS 1311
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: M0RPT3_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0
Identity = 295/408 (72.30%), Postives = 335/408 (82.11%), Query Frame = -2 
Query:  386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609
            NELV+TVRRNILMADWNDPSHVESLLNPKQWKFRS+TIRNVRLSCCVAGHIKVT+AG+DIQETMDILV++GLDPLSEEY FIK +LL G +C RC  WCRLP++TPCRH+LCLDCV LDS+ CTLPGCG+ YEMQ+PET+ARPENPNPKWP              DDW+PDWQSTSSSKVAYL+ERLK LQE N++   S+D  D+ K +   L  S+ +          S   +ESCK+LPEKV++FSQFLEHIHV+EQQLT AGI FA MYSPMHS NKMKSL  FQ D +CM LLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPI+VETLAM GTIEEQM++FLQD +ACR+  K+E  +  +EG+R  RTLH+FAESNYLARLSFV  N
Sbjct:  838 NELVLTVRRNILMADWNDPSHVESLLNPKQWKFRSSTIRNVRLSCCVAGHIKVTDAGQDIQETMDILVQHGLDPLSEEYGFIKNSLLNGCSCFRCENWCRLPVITPCRHMLCLDCVALDSERCTLPGCGYHYEMQSPETIARPENPNPKWP--------------DDWDPDWQSTSSSKVAYLVERLKVLQETNRKFGESVDGIDKTKEL---LYSSKVNCSFFVQRKAWSAQNSESCKVLPEKVIVFSQFLEHIHVVEQQLTVAGIIFAKMYSPMHSSNKMKSLMTFQLDPNCMVLLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMYGTIEEQMLKFLQDVNACRETFKQEVDKDEYEGTRAHRTLHNFAESNYLARLSFVCTN 1228
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: I1LLD5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 289/409 (70.66%), Postives = 336/409 (82.15%), Query Frame = -2 
Query:  386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKF-LKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609
            NELV+TVRRNILMADWNDPSH+ESLLNPKQWKFRS T++NVRLSCCVAGHIKVT AGEDIQETMD+LV++GLDP S EY  ++YNLLYGG+C RC EWCRLP++TPCRHLLCLDCV +D+  CT PGC  LYEMQ+ E  ARPENP PKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKV+YL++RLKAL+  N+E   + +  ++  HI+  L    RSD      +    + +    + PEKVLIFSQFLEHIH IEQQLT AGIK+ GMYSPMHS NK KSLAMFQ+D +CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGA+RPI+VETLAMRGTIEEQM++FLQDAD  R+  +K+ ++     G R  R+LHDFAES+YL +L  V+ N
Sbjct:  914 NELVITVRRNILMADWNDPSHIESLLNPKQWKFRSATLKNVRLSCCVAGHIKVTHAGEDIQETMDMLVQSGLDPTSGEYTSVRYNLLYGGHCVRCKEWCRLPLITPCRHLLCLDCVSIDNTKCTYPGCSKLYEMQSRE--ARPENPKPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVSYLVQRLKALRGTNEETYFNTENSNDDLHIENSL---HRSDDKSS--IQTCSMSSTKTNLNPEKVLIFSQFLEHIHAIEQQLTIAGIKYTGMYSPMHSSNKKKSLAMFQHDSNCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPIYVETLAMRGTIEEQMLDFLQDADNFRRSPIKDATESVDDSGGRGYRSLHDFAESSYLLKLRSVYTN 1315
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A059ACZ7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01185 PE=4 SV=1)

HSP 1 Score: 599.356 bits (1544), Expect = 0.000e+0
Identity = 296/407 (72.73%), Postives = 333/407 (81.82%), Query Frame = -2 
Query:  395 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDD-EAKHIDKFLCPSQRSDMGVPLLLN-HSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFV 1609
            NELVVTVRRNILMADWNDPSHVESLLNPKQWK R  TIRNVRLSCCVAGH+KV +AG+DIQETMD+LVE GLDPLSEEYA +KY L++GG+C RC EWCRLPI+TPCRHLLCLDCV L S+ CT PGCG+ Y+M+TPE  AR ENPNPKWPVPKDLIELQPSYKQDDW+ DWQSTSSSKVAYL+E+L+ LQ       C    D+  A +I +   PS  +   V L  +  S    +S ++  EKV+IFSQFLEHIHVIEQQL  AGI FAGMYSPMH+ NKMK+LA FQ+D SCMALLMDGSAALGLDLSFVTHVFLMEPIWD+SMEEQVISRAHRMGATRPI+VETL M GTIE+QM+EFLQDAD+C +FLKE++  S  EG R  RTLHDFA SNYL RL  V
Sbjct:  765 NELVVTVRRNILMADWNDPSHVESLLNPKQWKLRINTIRNVRLSCCVAGHVKVMDAGQDIQETMDLLVEYGLDPLSEEYALLKYYLIHGGDCLRCKEWCRLPIITPCRHLLCLDCVALSSERCTAPGCGYSYDMETPE--ARRENPNPKWPVPKDLIELQPSYKQDDWDSDWQSTSSSKVAYLLEKLRRLQGATGS--CQFASDNLSAVNIQEQATPSISNSSKVSLTQDDQSGSMTDSHRITTEKVIIFSQFLEHIHVIEQQLMLAGISFAGMYSPMHASNKMKALAKFQHDASCMALLMDGSAALGLDLSFVTHVFLMEPIWDKSMEEQVISRAHRMGATRPIYVETLTMCGTIEQQMLEFLQDADSCGRFLKEQACNSDQEGPRAHRTLHDFAGSNYLLRLKCV 1167
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: FB304_ARATH (F-box protein At3g54460 OS=Arabidopsis thaliana GN=At3g54460 PE=2 SV=1)

HSP 1 Score: 581.637 bits (1498), Expect = 0.000e+0
Identity = 285/408 (69.85%), Postives = 326/408 (79.90%), Query Frame = -2 
Query:  386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609
            NELV TVRRNIL+ADWNDPSHVESLLN KQWKFRS TI NVRLSCCVAGHIK+T+AG DI+ETMD L+EN LD  +EEY+FI+ +L+ G NC+RC EWCRLP++TPCRHLLCLDCV LDS+ CT+ GCG+LYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKV+YL++RL+ L E NK+   S ++ D     D    P   S+  +   L+    G++   +  +KVLIFSQFLEHIHVIEQQLT AGIKF  MYSPM S NKMK+LAMFQ D  CMALLMDGS ALGLDLSFVTHVFLMEPIWD+S+EEQVISRAHRMGA RPI VETL MRGTIEEQMM FL+DA+   + L  +   +  E +R  RTLHD  ESNYL+ LSFV  +
Sbjct:  957 NELVETVRRNILLADWNDPSHVESLLNSKQWKFRSITISNVRLSCCVAGHIKMTDAGHDIKETMDALLENDLDLWTEEYSFIQDSLIGGCNCKRCGEWCRLPVITPCRHLLCLDCVALDSERCTISGCGYLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVSYLVDRLRKLHEGNKKSILSFNKTDNDNLEDN---PPGTSEAFLGKELHGQDCGSQ--MVFVDKVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMALLMDGSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMMRFLEDAEKSDRLLSGDYIEAKQETTRSRRTLHDLVESNYLSHLSFVRSD 1359
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_SCHPO (DNA repair protein rad8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rad8 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.547e-15
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = -2 
Query:  527 PEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 886
            PEKV+IFSQF   + +I   L    + +A     M    +  +L  F+ D     L++   A  +GL+L+   HVF+M+P W  S+E Q I R HR+G  +P+ V    +R T+EE+M++ 
Sbjct:  981 PEKVVIFSQFTTFLDIIADVLESEKMGYARFDGTMSQQMRSTALETFRNDPDVNVLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERMLKI 1101
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: YF2C_SCHPO (Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.12 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.882e-15
Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = -2 
Query:  488 EKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSA-ALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKE 883
            EK+L++SQF +++ ++   L    I+       M +  + KSL  F  D   + +L+   A ++GL+L+   HV L EP ++ S+E+Q I R HR+G  +P+ V     + TIEE+++   +     R+ +KE
Sbjct:  742 EKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSVQRKK---RQLVKE 871
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_CRYNB (DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.003e-15
Identity = 39/127 (30.71%), Postives = 72/127 (56.69%), Query Frame = -2 
Query:  509 KVLIFSQFLEHIHVIEQQLTFAGIK---FAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADA 880
            K L+FSQF   + +IE  LT  GI+   F G  S     N ++     + ++  + L+   +  +GL+L+   +VFLM+  W+ ++E+Q I R HR+G  +P++V    ++GT+E+++M+  +   A
Sbjct: 1037 KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGR-KTNEPLILLISLKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKIQRSKTA 1162
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_CRYNJ (DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.637e-15
Identity = 39/127 (30.71%), Postives = 72/127 (56.69%), Query Frame = -2 
Query:  509 KVLIFSQFLEHIHVIEQQLTFAGIK---FAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADA 880
            K L+FSQF   + +IE  LT  GI+   F G  S     N ++     + ++  + L+   +  +GL+L+   +VFLM+  W+ ++E+Q I R HR+G  +P++V    ++GT+E+++M+  +   A
Sbjct: 1037 KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGR-KTNEPLILLISLKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKIQRSKTA 1162
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: YG42_SCHPO (Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC23E6.02 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.607e-14
Identity = 39/123 (31.71%), Postives = 71/123 (57.72%), Query Frame = -2 
Query:  518 EKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQD 883
            +K+LIFSQF+  + +        GIK+      + +  + ++L  F+ D +   LL+   A  +GL+L+   HV +++P W+  +EEQ + RAHR+G  +P+++  +    TIEE+++  LQD
Sbjct:  884 DKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLA-LQD 1005
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_DEBHA (DNA repair protein RAD5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RAD5 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.707e-14
Identity = 62/265 (23.40%), Postives = 117/265 (44.15%), Query Frame = -2 
Query:  527 VTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLT------FAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 1300
            +TPC H  CL+CV             H ++ Q   +  +P  PN + P+ K                        K+  L  R  +++E+    +  M++  +      +L    ++   +  L+NH ++  E      E+V++FSQF  ++ +IE +L       F   KF G  +       +++ +  ++++  M LL+   A  +GL+L+  +  F+M+P W  S+E+Q I R HR+G    + V    M  +IE +M++ 
Sbjct:  931 LTPCGHAYCLNCV-----------LEH-FDFQEKNS-QKPLCPNCREPISK-----------------------YKIFKLRHRDTSVKEIRFHTKQEMEDPSQNFKFQLYLYDPTKTSSKIQCLINHLKILKEQSP--NEQVVVFSQFSSYLDIIENELKIQISNDFVVYKFDGRLNMNERQKILENFSSQKHENKVMILLLSLKAGGVGLNLTTASRAFMMDPWWSPSVEDQAIDRLHRIGQNSNVKVTRFIMADSIETKMLKI 1157
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_YEAST (DNA repair protein RAD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD5 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.168e-13
Identity = 42/124 (33.87%), Postives = 70/124 (56.45%), Query Frame = -2 
Query:  533 EKVLIFSQFLEHIHVIEQQLT------FAGI-KFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMM 883
            E+V+IFSQF  ++ ++E++LT       A I KF G  S     + +   A+  Y    + LL   +  +GL+L+  +H ++M+P W  SME+Q I R HR+G T  + V    ++ +IEE+M+
Sbjct: 1013 EQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1136
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: YBMA_SCHPO (Uncharacterized ATP-dependent helicase C582.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC582.10c PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.446e-13
Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = -2 
Query:  527 KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMD-GSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 880
            K +IFSQF   + +I+  L  AGI F      M++  + KSL + + D     LL      ALGL+L+  + V L +  W+ ++EEQ I R HR+G  R + V  L +  TIEE+++E 
Sbjct:  672 KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKCGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVEL 790
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_CANAL (DNA repair protein RAD5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.970e-13
Identity = 83/355 (23.38%), Postives = 144/355 (40.56%), Query Frame = -2 
Query:  527 TTIRNVRLSCC----VAG------HIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYG-----GNCQRCNEWCRLP----IVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSR-LGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAG-----IKFAGMYSPMHSGNKMKSLAMFQ--YDDSCMALLMDG--SAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 1504
            T I  +R  CC    + G       I   E  ED+++ +  + EN +   ++     K   LYG       C  C +   +P    +VTPC H  CL C+             HL                          + Q   K++   P+ +S  S    Y + R++       E+R    +D        +L    RS   +  L+ H + L ++S      KV++FSQF  ++ +I+ +L  A       KF G    ++  ++ K L  F    +D  +A+L+    +  +GL+L+  +  ++M+P W  S+E+Q I R HR+G    + V    M  +IE +M++ 
Sbjct:  745 THILRLRQVCCHVDLIGGAHEMDDEIIEAEQDEDMRKFLTSIKENQIRFANDTDVKEKMYNLYGKIKEENECSICTQ-VPIPYSEMVVTPCAHTFCLSCI-----------LEHL--------------------------DFQKELKKEKLCPNCRSPISK---YQLFRIRNQPTKGNEIRFHTQKDAPDYSFQLYLYDPNRSSSKIQALVRHLKALHSQSPN---SKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGR---LNMNDRTKLLESFNQPLEDGKVAILLLSLKAGGVGLNLTTASRAYMMDPWWSPSIEDQAIDRIHRIGQNETVKVVRFIMENSIETKMLKI 1052
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067L8T8_JATCU0.000e+078.82Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
F6I5R7_VITVI0.000e+078.73Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A0A0KTQ6_CUCSA0.000e+074.38Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
K4D4D8_SOLLC0.000e+072.36Uncharacterized protein OS=Solanum lycopersicum GN... [more]
W9RB23_9ROSA0.000e+072.25F-box protein OS=Morus notabilis GN=L484_023953 PE... [more]
B9GWX1_POPTR0.000e+074.57SNF2 domain-containing family protein OS=Populus t... [more]
A0A022RE03_ERYGU0.000e+072.02Uncharacterized protein OS=Erythranthe guttata GN=... [more]
M0RPT3_MUSAM0.000e+072.30Uncharacterized protein OS=Musa acuminata subsp. m... [more]
I1LLD5_SOYBN0.000e+070.66Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
A0A059ACZ7_EUCGR0.000e+072.73Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
FB304_ARATH0.000e+069.85F-box protein At3g54460 OS=Arabidopsis thaliana GN... [more]
RAD5_SCHPO3.547e-1534.71DNA repair protein rad8 OS=Schizosaccharomyces pom... [more]
YF2C_SCHPO4.882e-1530.83Uncharacterized ATP-dependent helicase C17A2.12 OS... [more]
RAD5_CRYNB7.003e-1530.71DNA repair protein RAD5 OS=Cryptococcus neoformans... [more]
RAD5_CRYNJ7.637e-1530.71DNA repair protein RAD5 OS=Cryptococcus neoformans... [more]
YG42_SCHPO1.607e-1431.71Uncharacterized ATP-dependent helicase C23E6.02 OS... [more]
RAD5_DEBHA1.707e-1423.40DNA repair protein RAD5 OS=Debaryomyces hansenii (... [more]
RAD5_YEAST2.168e-1333.87DNA repair protein RAD5 OS=Saccharomyces cerevisia... [more]
YBMA_SCHPO2.446e-1336.13Uncharacterized ATP-dependent helicase C582.10c OS... [more]
RAD5_CANAL5.970e-1323.38DNA repair protein RAD5 OS=Candida albicans (strai... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 254..336
e-value: 2.0E-4
score: 30.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 239..336
e-value: 7.3E-9
score: 35.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 231..374
score: 9.772
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 241..363
e-value: 7.9E-11
score: 41.1
coord: 173..192
e-value: 7.9E-11
score: 41.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 241..362
coord: 168..192
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 205..220
e-value: 3.6E-5
score: 22.8
coord: 89..114
e-value: 3.6E-5
score: 22.8
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 1..26
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 90..128
coord: 238..358
NoneNo IPR availablePANTHERPTHR10799:SF573TRANSCRIPTION TERMINATION FACTOR 2coord: 1..26
coord: 165..189
NoneNo IPR availablePANTHERPTHR10799:SF573TRANSCRIPTION TERMINATION FACTOR 2coord: 90..128
NoneNo IPR availablePANTHERPTHR10799:SF573TRANSCRIPTION TERMINATION FACTOR 2coord: 238..358
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 165..189
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 105..114

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0010658 ID=g.arboreum_cottongen_reftransV1_0010658; Name=g.arboreum_cottongen_reftransV1_0010658; organism=Gossypium arboreum; type=contig; length=1610bp
CTCAAATCCAACTCTAAAATATATTTCAATTAGAATTCACCTGTTTGGAA
GATAATGCAATGAATATTCATCCAGACATGTGACATAACATATCAGTAAA
GGCACCATTATACACCAAAAAATGACCTAAAACATACAACCTACAGATAA
TAAATGTTAAATTATCCTATGTATTAGGTACCAAAAAATTAGCAACACCA
AGGTATTTTCTACAACAATGAAAGATGGTTGTGAACTGTACCATGTTCCA
CCAAAAGGTACCGAGTATCAAGAACAAGCTGCACTATATTTGTAGAACCG
TCAACTGAAGTCGGTGCTAATATTTTAAAATGGTGCCCTCCTATCCTTTT
AGAATAACAGTCCTGTAAGTCACTTAGGATACTGAATTTCTATGCACAAA
GCTAAGTCGAGCCAAATAATTACTCTCAGCAAAATCATGGAGTGTTCGAC
AAGGTCGTGAACCCTCATGGCCTGATCTCTGGGACTCTTCTTTCAAAAAT
TTCCTACATGCATCAGCATCCTGTAAGAATTCCATCATTTGTTCTTCAAT
TGTACCACGCATGGCTAAAGTTTCCACATGAATTGGACGAGTAGCACCCA
TCCGATGGGCACGACTAATGACTTGTTCCTCCATGCTTCTGTCCCAAATA
GGCTCCATTAAAAATACATGAGTAACAAAACTTAAATCAAGACCCAATGC
AGCACTCCCATCCATCAAGAGAGCCATGCAGCTATCATCATACTGGAACA
TGGCCAGTGACTTCATCTTGTTGCCAGAATGCATTGGACTATACATTCCA
GCAAACTTGATACCAGCAAAAGTAAGCTGCTGCTCAATAACATGTATATG
CTCAAGAAATTGGGAAAATATTAGAACTTTCTCTGGAAGCATCTTGCATG
ACTCATTGCCCAGTCTAGAGTGATTCAGCAGCAAAGGCACGCCCATATCA
CTCCTCTGTGAAGGACAAAGAAACTTATCTATGTGCTTGGCTTCATCATC
TTCATCCATAGAGCAACGGACCTCTTTATTTACCTCCTGCAATGCCTTCA
GCCTCTCCATAAGATAAGCAACTTTACTGCTAGAGGTTGATTGCCAATCA
GGATTCCAGTCATCCTGTTTATATGAAGGTTGTAATTCGATAAGATCTTT
TGGGACAGGCCACTTGGGATTTGGATTTTCCGGGCGCGCTAATGTTTCAG
GAGTCTGCATCTCATATAAGTGACCACAGCCAGGTAAAGTACACATTTTA
CTGTCCAAACCAACACAATCAAGGCACAAAAGATGCCTACATGGGGTAAC
AATTGGTAGACGGCACCATTCATTGCATCTCTGACAATTACCACCATAAA
GGAGGTTATATTTAATAAAAGCATATTCTTCTGAAAGAGGATCCAGGCCA
TTTTCAACTAAAATGTCCATTGTTTCTTGAATATCTTCACCAGCTTCTGT
CACTTTTATATGCCCAGCCACACAACAAGACAACCTGACATTTCTAATTG
TTGTACTCCGAAACTTCCACTGCTTTGGATTTAATAAACTTTCAACATGA
GAAGGATCATTCCAGTCAGCCATTAGAATATTACGCCGCACTGTAACTAC
CAATTCATTA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C-like
IPR027417P-loop_NTPase
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS