g.arboreum_cottongen_reftransV1_0011991, g.arboreum_cottongen_reftransV1_0011991 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A0D2TUK1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G239200 PE=4 SV=1) HSP 1 Score: 519.235 bits (1336), Expect = 7.856e-165 Identity = 247/252 (98.02%), Postives = 251/252 (99.60%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGL-YSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES 755 FCLRLYE+LQ+T+KSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGL YSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKR+S Sbjct: 1134 FCLRLYEYLQKTLKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLGYSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRDS 1385
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A0D2USZ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G239200 PE=4 SV=1) HSP 1 Score: 519.235 bits (1336), Expect = 8.206e-165 Identity = 247/252 (98.02%), Postives = 251/252 (99.60%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGL-YSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES 755 FCLRLYE+LQ+T+KSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGL YSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKR+S Sbjct: 1133 FCLRLYEYLQKTLKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLGYSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRDS 1384
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A061FFE4_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_034949 PE=4 SV=1) HSP 1 Score: 459.144 bits (1180), Expect = 1.922e-142 Identity = 220/252 (87.30%), Postives = 237/252 (94.05%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGL-YSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES 755 FCLRLYEHLQ+T+KSLG+PKITVGIITPYKLQLKCLQREFESV+++EEGK D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNA+ALVQSDDWAALIADAKAR CYMDMDSLPKDF K+LL FSGPRGL Y PSQGK SNMRGLRSAGPRHRSLDMHM+SR+GTPSEDEDKSGT+VISRNGNYRPFK P++T LDDF SGDKSREAWQYGI KKQ+SAG +GKR+S Sbjct: 1102 FCLRLYEHLQKTVKSLGLPKITVGIITPYKLQLKCLQREFESVIKSEEGK-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSDDWAALIADAKARKCYMDMDSLPKDFPKELL-SNFSGPRGLGYPPSQGKVSNMRGLRSAGPRHRSLDMHMDSRAGTPSEDEDKSGTSVISRNGNYRPFKPPMETSLDDFDQSGDKSREAWQYGIQKKQSSAGVVGKRDS 1351
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A061FG69_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_034949 PE=4 SV=1) HSP 1 Score: 459.144 bits (1180), Expect = 3.925e-142 Identity = 220/252 (87.30%), Postives = 237/252 (94.05%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGL-YSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES 755 FCLRLYEHLQ+T+KSLG+PKITVGIITPYKLQLKCLQREFESV+++EEGK D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNA+ALVQSDDWAALIADAKAR CYMDMDSLPKDF K+LL FSGPRGL Y PSQGK SNMRGLRSAGPRHRSLDMHM+SR+GTPSEDEDKSGT+VISRNGNYRPFK P++T LDDF SGDKSREAWQYGI KKQ+SAG +GKR+S Sbjct: 1136 FCLRLYEHLQKTVKSLGLPKITVGIITPYKLQLKCLQREFESVIKSEEGK-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSDDWAALIADAKARKCYMDMDSLPKDFPKELL-SNFSGPRGLGYPPSQGKVSNMRGLRSAGPRHRSLDMHMDSRAGTPSEDEDKSGTSVISRNGNYRPFKPPMETSLDDFDQSGDKSREAWQYGIQKKQSSAGVVGKRDS 1385
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A0D2TSW3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G282100 PE=4 SV=1) HSP 1 Score: 413.69 bits (1062), Expect = 2.223e-125 Identity = 204/252 (80.95%), Postives = 222/252 (88.10%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGL-YSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES 755 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESV+++EEG D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRAL VMGNA ALVQSDDWAALIADAKARNCY+DMDSLPKDF KDL+ K+FSGPRGL Y PSQGKASN R R AGPRHRS DMHM+SRSGTP ED KS I RNGNYRPFK P++ LD+F +GDKSR+AWQYG +K+NSAG + K++S Sbjct: 1133 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVIKSEEGN-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALLVMGNAKALVQSDDWAALIADAKARNCYVDMDSLPKDFQKDLVSKDFSGPRGLGYPPSQGKASNTRSFRYAGPRHRSGDMHMDSRSGTPLEDAGKS----IYRNGNYRPFKPPMEPSLDNFDQAGDKSRDAWQYGT-QKRNSAGALWKKDS 1378
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A0B0MLJ7_GOSAR (SPBC29A10.10c: Uncharacterized ATP-dependent helicase C29A10.10c OS=Gossypium arboreum GN=F383_21170 PE=4 SV=1) HSP 1 Score: 403.675 bits (1036), Expect = 1.384e-121 Identity = 203/260 (78.08%), Postives = 220/260 (84.62%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALW--------VMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGL-YSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES 755 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESV+++EEG D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRAL VMGNA ALVQSDDWAALIADAKARNCYMDMDSLPKDF KDL+ K+FSG RGL Y PSQGKASN R R AGPRHRS DMHM+SRSGTP ED KS I RNGNYRPFK P++ LD+F +GDKSR+AWQYG +K+NSA + K++S Sbjct: 1145 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVIKSEEGN-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALLELTLMFEQVMGNAKALVQSDDWAALIADAKARNCYMDMDSLPKDFQKDLVSKDFSGSRGLGYPPSQGKASNTRSFRYAGPRHRSGDMHMDSRSGTPLEDAGKS----IYRNGNYRPFKPPMEPSLDNFDQAGDKSRDAWQYGT-QKRNSAAALWKKDS 1398
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: W9RSI0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021548 PE=4 SV=1) HSP 1 Score: 389.423 bits (999), Expect = 2.434e-119 Identity = 193/251 (76.89%), Postives = 216/251 (86.06%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGKA-SNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRE 752 FCLR+YEHLQ+T KSLG+ KI+VGIITPYKLQLKCLQREFE VL +EEGK D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNA+AL+QSDDWAALIADAK+R+CYMDMDSLPKDF L+PK G Y+P GK SN RGLRS GPRHRS DMHMESRSGT SED++KSG ISRNG+YRPF+ P + LDDF SGD+S++AWQYGI KKQNS+G + KR+ Sbjct: 721 FCLRVYEHLQKTAKSLGLGKISVGIITPYKLQLKCLQREFEDVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALIQSDDWAALIADAKSRDCYMDMDSLPKDF---LVPK------GPYTPLPGKVLSNSRGLRSGGPRHRSFDMHMESRSGTLSEDDEKSGVA-ISRNGSYRPFRPPFENSLDDFDQSGDRSKDAWQYGIQKKQNSSGVVAKRD 960
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: M5XRW4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000264mg PE=4 SV=1) HSP 1 Score: 392.504 bits (1007), Expect = 1.229e-117 Identity = 190/251 (75.70%), Postives = 218/251 (86.85%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGK-ASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRE 752 FC+RLYEHL +++K+ GV KI+VGIITPYKLQLKCLQREFE VL +EEGK D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNA+AL+QSDDWA+LI DAKARNCYMDM++LPK+F L+PK GP Y+P GK +SNMRG RSAGPRHRSLDMH+ESRSGTPSED++K G +VISRNG YRP K P + LDDF SGDKSR+AWQYGI +K +SAG +G+R+ Sbjct: 1134 FCVRLYEHLHKSLKAFGVGKISVGIITPYKLQLKCLQREFEDVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALMQSDDWASLITDAKARNCYMDMETLPKEF---LVPK---GPS--YTPLPGKPSSNMRGFRSAGPRHRSLDMHVESRSGTPSEDDEKLGASVISRNGTYRPMKPPFENSLDDFDQSGDKSRDAWQYGIQRKHSSAGVVGRRD 1375
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A5BNC8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009619 PE=4 SV=1) HSP 1 Score: 392.504 bits (1007), Expect = 1.872e-117 Identity = 192/252 (76.19%), Postives = 220/252 (87.30%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGK-ASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES 755 CLRLYEHLQ+T+KSLG+ KI+VGIITPYKLQLKCLQREF+ VL +EEGK D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNA+AL+QSDDWAALI+DA+AR+CY+DMDSLPK+F L+PK GP Y P GK +SNMRGLRSAGPRHR LDMH+ES+SGTPSED++KS ++ISRNGNYRP K ++ LDDF S DKSR+AWQYGI KKQ+SAG + KR+S Sbjct: 1166 ICLRLYEHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFDDVLSSEEGK-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALMQSDDWAALISDARARSCYLDMDSLPKEF---LVPK---GP--TYGPLSGKVSSNMRGLRSAGPRHRQLDMHVESKSGTPSEDDEKSNASLISRNGNYRPLKPTMENSLDDFDQSADKSRDAWQYGIQKKQSSAGVVAKRDS 1408
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A067EWL0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047960mg PE=4 SV=1) HSP 1 Score: 360.147 bits (923), Expect = 5.482e-115 Identity = 185/267 (69.29%), Postives = 211/267 (79.03%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGK-ASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES*ALVVVYELFWLMAV 800 F + LYEHLQ+T+KS+G+ K+TVGIITPYKLQLKCLQ EF +VL +EEGK D+YINTVDAFQGQERDVIIMSCVRAS+HGVGFVADIRRMNVALTRARRALWVMGNA AL QSDDWAALIAD+KARNCYMDMDSLPK+F+ L K Y P QGK N RGLRSAG RHRS DM+MESRSGTPSED++K +SRNGNYRPFK PL+ LDDF SG+K R+AWQ+GI KKQ+S G R L + + FW + + Sbjct: 76 FGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPG-----YGPLQGKIPHNARGLRSAGQRHRSFDMNMESRSGTPSEDDEK-----VSRNGNYRPFKPPLENSLDDFDQSGEKYRDAWQHGIQKKQSSGGKGSPR----LEDLVDAFWWVGL 327
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Match: RENT1_CAEEL (Regulator of nonsense transcripts 1 OS=Caenorhabditis elegans GN=smg-2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.124e-14 Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 21 EHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGK------RDIYINTVDAFQGQERDVIIMSCVRASS-HGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKAR 380 E L + GV +G+IT Y+ Q R F +G ++ I +VDAFQG+E+D II++CVR++ G+GF++D RR+NVA+TRA+ L ++GNA L + D W LI K++ Sbjct: 748 EKLVSKLIKAGVQPHQIGVITSYEGQ-----RSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVLARHDLWHELINHYKSK 869
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Match: SDE3_ARATH (Probable RNA helicase SDE3 OS=Arabidopsis thaliana GN=SDE3 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.448e-12 Identity = 50/179 (27.93%), Postives = 94/179 (52.51%), Query Frame = 3 Query: 12 RLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRAS--------SHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLP--KDFTKDLLPKEFSGPRGLYSPSQGKASNMRGLRSAG 518 ++ E ++R + V + +G+ITPY+ Q+ ++ + + TE + + +V+ FQGQE+ VII+S VR++ ++ +GF+++ RR NVA+TRA L ++GN + + +W L+ N Y LP ++F ++ +E S G P + + +N L + G Sbjct: 690 KVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVLDRLDMTE-----VKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGC-GLPEQEEFVEEPFKQEGSS-NGPQYPPEAEWNNSGELNNGG 861
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Match: MOV10_CHICK (Putative helicase MOV-10 OS=Gallus gallus GN=MOV10 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.799e-12 Identity = 47/142 (33.10%), Postives = 79/142 (55.63%), Query Frame = 3 Query: 15 LYEHLQRTIKSLG---VPKIT---VGIITPYKLQLKCLQREFES---VLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGV--------GFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCY 389 + ++LQ+ ++S G P I+ +GII+PY+ Q++ ++ S VLR + + +V+ FQGQER VI++S VR+ S + GF+ + +R+NVALTRA+ L V+GNA+ L + W + + Y Sbjct: 800 VVQYLQKLLQSQGRRGCPTISPKEIGIISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDEGAY 941
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Match: MOV10_BOVIN (Putative helicase MOV-10 OS=Bos taurus GN=MOV10 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.009e-12 Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 3 Query: 66 TVGIITPYKLQLK----CLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGV--------GFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCY 389 +VG+I+PY+ Q++ C+ + + LR + +D+ + +V+ FQGQER VI++S VR+S V GF+ + +R NVA+TRA+ L V+GN L DW + K Y Sbjct: 826 SVGVISPYRKQVEKIRYCITK-LDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKENGGY 944
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Match: DNA2_XENLA (DNA replication ATP-dependent helicase/nuclease DNA2 OS=Xenopus laevis GN=dna2 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.066e-12 Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 12 RLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHG-VG-FVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDM 398 +L HL + G +GII PY+ QLK + F S+ + +NTVD +QG+++ VII+S VR++ G +G + D RR+NVALTRA+ L ++G L + D LI + K N D+ Sbjct: 918 KLVFHLTKLYLKAGCRPSDIGIIAPYRQQLKMISNYFNSL-----SASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLNRFDCLEQLICNLKTENQIYDL 1043 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0011991 ID=g.arboreum_cottongen_reftransV1_0011991; Name=g.arboreum_cottongen_reftransV1_0011991; organism=Gossypium arboreum; type=contig; length=1854bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|