g.arboreum_cottongen_reftransV1_0005590, g.arboreum_cottongen_reftransV1_0005590 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0005590
Unique Nameg.arboreum_cottongen_reftransV1_0005590
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length2426
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr11chromosomeg.arboreum_cottongen_reftransV1_0005590:1..2426 .
Chr11:73446004..73450133 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A067DRC6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0037502mg PE=4 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 1.024e-74
Identity = 200/569 (35.15%), Postives = 288/569 (50.62%), Query Frame = 2
Query:  119 SYGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQ---NSHGSVAPVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDG-----------NENGPPSRSD-DSNDENGNQEGNLIPQIKKNEE------LLGRNPIPSKRSRDEL----VAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGR-VELLDNQMENVQNDNTDMMVE-QKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFN----ISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQE-------QGRSWNHSKLNGNENLAGIQESGHL 1711
            S G    WLWIIEY++SF ++D SI+  LIETAP +P+DL + T E VALRCLE+LFG     N  G     ++     S SC+DVL      ILQ+   SDL  AGPELL+WD H FI HKRA +PKCAL+ LKD IL     L             +E G     D D N +  +++ NL+P   +N +      L  RN +P KRSR ++    VA ++ G+        +CDL+ NAKK K   + A +    A+                       +I     GK +      RD+ VA R         +   L ++Q  +   DN D +    ++GD+    +  N++    N A +  +       +D    +    S+   G Q     +  + +++H C E+   D D   N    +++KK+ FLSSQ     D +  + WTEQN CVKCN++G+LL C+SS C LAVHE+CL  P +FD+KG+F CPFCA ++SIS YLEAK +  +ARK+L AFM  MG +  +         +   HS  NG+++   I E+G++
Sbjct:    9 SAGSSLLWLWIIEYLASFKEVDTSILHDLIETAPEIPDDLAKVTREMVALRCLEDLFGSSDKVNDDGLSCTENKVGFALSESCEDVLQ----QILQETSASDLNIAGPELLKWDVHPFIMHKRALMPKCALQHLKDTILEGTHPLAASLKETSGLTCVSECGTARVGDLDHNAQAMSEKENLLPSTCENRDGQPRDNLHIRNMLPFKRSRGDMAIRDVAAHTNGV------QEKCDLNYNAKKHK---QDAISNHQSAD-----------------------QISVPTCGKETVEPLSGRDVAVAGREGSHFSNQSQDAGLEESQFPDDGCDNCDDLRRLGQNGDVNDDQIQHNQAEDGHNAARLPRAEPVQNATVDEANITERVPSV---GTQHEDTEDESRGEVEHSCEEETLSDNDAYHNDRIDVAVKKSHFLSSQAALGHDSLATSGWTEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCAYTLSISEYLEAKKRASVARKELAAFMQ-MGSVCHQMDLANKLHSKDPGHSGSNGDKD---IHENGNV 534          

HSP 2 Score: 115.161 bits (287), Expect = 4.473e-23
Identity = 69/146 (47.26%), Postives = 96/146 (65.75%), Query Frame = 2
Query: 1787 NTETFPINQVEVEGDDILKEVVGPQITDASQK------LVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELAN-EDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203
            NT   P++  E E   + KE V P  +++S         +N D EE S S DDK+IIS++S R ++ +T  ++ P  +LRRKK PWT  EEE+L+KGVQ+ A+ +D  +PWK+ILEFG++VF   RTA DLK+KWR+MCK SP  K
Sbjct:  654 NTYVEPMDDTEAEAK-LQKEDVQPASSESSDPPESPVIALNIDEEEISESEDDKFIISNYSIRFRRPKTHYTYPPIPQLRRKKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFSGRTAIDLKDKWRNMCKGSPRSK 798          
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: V4S792_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004349mg PE=4 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 2.728e-73
Identity = 199/569 (34.97%), Postives = 287/569 (50.44%), Query Frame = 2
Query:  119 SYGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQ---NSHGSVAPVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDG-----------NENGPPSRSD-DSNDENGNQEGNLIPQIKKNEE------LLGRNPIPSKRSRDEL----VAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGR-VELLDNQMENVQNDNTDMMVE-QKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFN----ISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQE-------QGRSWNHSKLNGNENLAGIQESGHL 1711
            S G    WLWIIEY++SF ++D SI+  LIETAP +P+DL + T E VALRCLE+LFG     N+ G     ++     S SC+DVL      ILQ+   SDL  AGPELL+WD H FI HKRA +PKCAL+ LKD IL     L             +E G     D D N    +++ NL+P   +N +      L  RN +P KRSR ++    +A ++ G+        +CDL+ NAKK K   + A +    A+                       +I     GK        RD+ VA R         +   L ++Q  +   DN D +    ++GD+    +  N++    N A +  +       +D    +    S+   G Q     +  + +++H C E+   D D   N    +++KK+ FLSSQ     D +  + WTEQN CVKCN++G+LL C+SS C LAVHE+CL  P +FD+KG+F CPFCA ++SIS YLEAK +  +ARK+L AFM  MG +  +         +   HS  NG+++   I E+G++
Sbjct:    9 SAGSSLLWLWIIEYLASFKEVDTSILHDLIETAPEIPDDLAKVTREMVALRCLEDLFGSSDKVNNDGLSCTENKVGFALSESCEDVLQ----QILQETSASDLNIAGPELLKWDVHPFIMHKRALMPKCALQHLKDTILEGTHPLAASLKESSGLTCVSECGTARVGDLDHNALAMSEKENLLPSTCENRDGQPRDNLHIRNMLPFKRSRGDMATRDMAAHTNGV------QEKCDLNYNAKKHK---QDAISNHQSAD-----------------------QISVPTCGKEMVEPLSGRDVAVAGREGSHFSNQSQDAGLEESQFPDDGCDNCDDLRRLGQNGDVNDDQIQHNQAEDGHNAARLPRAEPVQNATVDEANITERVPSV---GTQHEDTEDESRGEVEHSCEEETLSDNDAYHNDRIDVAVKKSHFLSSQAALGHDSLATSGWTEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCAYTLSISEYLEAKKRASVARKELAAFMQ-MGSVCHQMDLANKLHSKDPGHSGSNGDKD---IHENGNV 534          

HSP 2 Score: 115.546 bits (288), Expect = 3.188e-23
Identity = 69/146 (47.26%), Postives = 97/146 (66.44%), Query Frame = 2
Query: 1787 NTETFPINQVEVEGDDILKEVVGPQITDASQK------LVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELAN-EDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203
            NT   P++  E E + + KE V P  +++S         +N D EE S S DDK+IIS++S R ++ +T  ++ P  +LRRKK PWT  EEE+L+KGVQ+ A+ +D  +PWK+ILEFG++VF   RTA DLK+KWR+MCK SP  K
Sbjct:  654 NTYVEPMDDTEAEAE-LQKEDVQPASSESSDPPESPVIALNIDEEEISESEDDKFIISNYSIRFRRPKTHYTYPPIPQLRRKKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFGGRTAIDLKDKWRNMCKGSPRSK 798          
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: B9SL53_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0089480 PE=4 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.563e-66
Identity = 199/586 (33.96%), Postives = 289/586 (49.32%), Query Frame = 2
Query:  137 AWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGS----VAPVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILL-DDPY--LDGNENGPPSRSDDSN--------DENGNQ------EGNLIPQIKKNEELLGR------NPIPSKRSRDELVAGNSKGIVSVNHGSM-QCDLHLNAKKSKLVAKPACTIQAVAELPIX----------XXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGL--IDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSP-VENGA-----PVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICED----EDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNE---NLAGIQESGHLGREHEHKQ 1735
            AWLW IEY++SF Q+D SI+  LI+ AP LPEDL +NT E VAL+CLE LF    +         P  +   + + +C+DVL  IL    +++ +SDLK AGP+LL+WD   FI HKRA++PKCALEQLKD IL    PY    G  +G   ++D++N        D NG        EGN I    +N   + R      N +P KR+ ++L   +  G    + G M + DL LNAKK K  A  +C  ++  ++ I                   + ES  + +V +IG   LG+    G G+       R  G+   DA        +++ N  N +     +  H  I+  +  +N++ P   NGA     P + S+ D   N D+     S   +S  G      +   +  +++   E    +      E+ +++++K+ FLSSQ   S     N  WTE N CV+C+++G+LLVC + GC   VHE CL C  +FD+KG+F CPFCA S +IS YLEAK    LARK+L AF+        E+      S L  NE   N+  I E+  LG     K+
Sbjct:   12 AWLWAIEYLASFKQIDPSILHDLIDEAPELPEDLGKNTREMVALKCLEHLFTNNTNEAPNDAPSVPNQKITFDLNEACEDVLQSIL----KEMSVSDLKMAGPDLLKWDVPPFILHKRASMPKCALEQLKDAILEGTHPYAAFFGELSGLVHKNDENNRITVSCGTDSNGTDAQIMAPEGNNIHLPLENMNRMVRDDSCLKNLLPLKRNGNDLDNEHPSGDYQEDQGGMDESDLLLNAKKFKTNA--SCAKKSREQILISQPCNELVEDSSRMMVGDAQKESCHVERVAQIG---LGECCSFGNGHGKFVATERLGGIPTADANNFQNNHSDRVNNANNKSEGTFGDGSHQCIL--DDEVNKAEPRASNGASSLRTPQEVSADDNKNNHDYGSQLRSPQVVSLSGFPRGTTVEKSEGGIENLYQEDTSSESGGYHHEMIDVAMEKSHFLSSQCTLSHASPSN--WTELNLCVQCSKDGQLLVCNAVGCPFVVHEKCLGCSPKFDEKGNFYCPFCAYSYAISKYLEAKKTATLARKELSAFIHKR----PERSHLQKLSNLGHNEDEDNICKIHETADLGERGSDKK 580          

HSP 2 Score: 126.716 bits (317), Expect = 1.223e-26
Identity = 71/165 (43.03%), Postives = 105/165 (63.64%), Query Frame = 2
Query: 1730 KQEELPAKLKTSDDNPTTENTETFPINQVEVEGDDILKEVVGPQITDASQKLV---NSDGEESSTSADDKYIISSHS---TRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELAN-EDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203
            ++++  A LKT  DNP +++ E F  N+ E EG    KEV+  Q +D  +K V   N D  E+S    D+ ++S +S    R +  E + ++  T + RRKK PWT  EEE+L++GVQ+ +N  D T+ WK+ILE+G+ VFL DRT TDLK+KWR++CK SP C+
Sbjct:  651 REDQTSAGLKTHGDNPMSKDKEMFSSNKEEAEGR-FEKEVLEQQSSDVLEKPVCAGNVDEGETSDDESDENMMSDYSIRLRRRRMREIQYAYPATPQFRRKKVPWTAKEEEILKEGVQKFSNISDRTISWKKILEYGSAVFLHDRTTTDLKDKWRNICKGSPKCQ 814          
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A067K2H5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21047 PE=4 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.951e-64
Identity = 202/589 (34.30%), Postives = 279/589 (47.37%), Query Frame = 2
Query:  131 RAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPV---SRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILL-DDPYLD-------------GNEN--------GPPSRSDDSNDENGNQ----EGNLIPQIKKNEELL------GRNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIG---------EGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVE----NGAPVKES-----SGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEI----FNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHE 1726
            R AWLW IEY++ F QLD S I  LI+ AP L EDL  +T E VALRCLE+LFG     G   P     +     S SC+D+L  +L    ++  LSDLK  G +LL+WD H FI HKRA++PKCALEQLKD IL    PY D             GN+            +R  DSN  +G+Q    EG  I    +N + +       R  +  KR + ++   +  G     H     DL+LN KK K     A       E  ++     E +ED S+ +++VTE  + ++   SQ G          G+       R     +A   VE    Q EN  N N   M+    GD  C  + ++E +  E    N  P   +     +GD   NI       S N++S+  +   + +       +H   +    D DE      +++++K+ FLSSQ   + + V   +WTEQN CVKC++ G+LLVC + GC L VHE CL    RFD+ G F CPFCA S++IS YL+AK    LARK+L AF+           R    S+ NG  NL   ++  HL   HE
Sbjct:    6 RMAWLWSIEYLAQFQQLDPSFIHDLIDEAPELSEDLGNSTREMVALRCLEQLFGTSKEVGKDVPSVTEPKDAFEFSKSCEDMLQSVL----KERALSDLKMPGGDLLKWDIHPFIMHKRASMPKCALEQLKDTILEGTHPYDDSLTELSGLVHKNVGNDRITVDYGGRNALTRGIDSN-ASGSQTMAPEGGTISLSLENTKGMVEGDSYHREFLLFKRKKGDMDNEHPAGAY---HDEQDGDLNLNVKKFKHGTSSA---NKSMEHYLNPQCGYELIEDSSEAMVRVTEYESCHMEGESQAGGLGESRYSENGHYKFVAIERLGRSPNANADVEFQQYQRENDHNANN--MLPDTSGDRPCQYMFVDEVNKAEPSTSNDTPFARTQQKVFAGDTN-NISDGNQVKSVNAVSSSEISRRITVEKAGCGTEHLYEKDTSIDGDEYCHERVDVAMEKSHFLSSQ--CTLNHVSQENWTEQNLCVKCSEGGQLLVCNAVGCPLVVHEKCLGSSPRFDENGEFYCPFCAYSLAISKYLQAKKNASLARKELGAFI----------CRRTRRSRSNGQNNLEQNEDRCHLYMVHE 568          

HSP 2 Score: 101.679 bits (252), Expect = 8.807e-19
Identity = 65/164 (39.63%), Postives = 98/164 (59.76%), Query Frame = 2
Query: 1730 KQEELPAKLKTSDDNPTTENTETF-PINQVEVEGDDILKEVVGPQITDASQKLVNSDG--EESSTSADDKYIISSHSTRSKKSETRQSFSPT--RRLRRKKAPWTNDEEEMLRKGVQELANE-DGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203
            +Q+++ A   ++ DN  + N E    +N+ +  G    +EV+  Q  D  +K V +     E+S   +++ IIS++S + +  E RQ   P   R LRRKK PWT  EEEML++GVQ+ +   D T+PWK+ILE+G+ +F   RT  DLK+KWR+MCK S  CK
Sbjct:  771 RQDQICADPNSNGDNQMSTNKEVVVSLNKKQSNGG-FQREVLEQQNGDLIEKPVGAVDIDRETSVEGNEENIISNYSRKFRGRE-RQYVFPALPRTLRRKKVPWTAKEEEMLKEGVQKFSTAGDRTIPWKQILEYGSTIF-SHRTTIDLKDKWRNMCKGSSKCK 931          
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: M5WWX5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021429mg PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.991e-57
Identity = 179/537 (33.33%), Postives = 258/537 (48.04%), Query Frame = 2
Query:  137 AWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSV-APV-----------SRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVIL-LDDPYLD--------------GNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKGIVSVNHGSMQC--DLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENV-----QNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNI------DHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDED------EIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFM 1609
            AW W++E ++ F ++ +S++  LI+ AP LPEDLE   +ERVALRCLE+LF P    G V AP+           S+   + S SCDDVL  I+     + P SDLK  GP LL+WD   FI HKRA++PKCAL QLKD IL    PY D              GN+  P S S      NG+        ++ N+     N + SKR+   ++A NS+ +   +HG +    DL  N KK KL    A  +    E         ERL+D S+R   + E                R+ CV +     +  +   ++L++  +N         +T++ + +   +I C      E        P   +SG V  ++      +H       ++ SADG Q+    +  K  MD  C    CE  D      E  ++++KK  FL+SQ   ++      DWTE+N C+KCN+ G+LL+C++S C L  HE CL        KG+F CPFC+ S+++  YLEAK K  L RK L AFM
Sbjct:   12 AWGWLLEALAGFKEVGVSLLHDLIKMAPDLPEDLETKVNERVALRCLEDLFSP----GDVPAPLPSTSTSTSTHHSKVTFDLSESCDDVLQRIV----NETPESDLKMGGPGLLKWDVQPFIVHKRASMPKCALSQLKDSILDGTHPYADFLIKKSGLTSTRDGGNDRLPVSDSSRRRRFNGSCSNAKNTSVEGNDA----NVLLSKRA---MIASNSENLADEDHGGVNGSDDLRRNVKKVKL---DASYVSQSVEHNTISLPQKERLDDSSERDGPIFE----------------RERCVLAEY--RMRMLEESKVLEDDHDNYTCSKRSGQSTEIAIHKSQLEIPC----TAEGKEDSEHCPEPTTSGVVPPDVTQHKDPEHGSHVKVAHAASADGSQQKTVADRAKDPMD--C---HCESSDSYGFNNEKIDVAMKKQDFLTSQCTINRAYSDTIDWTEENFCMKCNEGGQLLICSTSDCPLVYHEKCLGSEFICYKKGNFYCPFCSHSLALKEYLEAKKKAFLLRKDLDAFM 503          
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A067KG49_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13752 PE=4 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.370e-53
Identity = 174/539 (32.28%), Postives = 258/539 (47.87%), Query Frame = 2
Query:  866 SQRIMKVTEIGTNNLGKVSQIG--------EGNRDLCVASRTPGLI-DAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVE----NGAPVKES-----SGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEI----FNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFM--------------------GLMGKLIQEQG----RSWNHSKLNGNEN------------------------------------LAGIQESGHLGREHEH-----KQEELPAKLKTSDDNPTTENTETF-PINQVEVEGDDILKEVVGPQITDASQKLVNS--DGEESSTSADDKYIISSHSTRSKKSETRQSFSPT--RRLRRKKAPWTNDEEEMLRKGVQELAN-EDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203
            S+ +++VTE G+ ++   SQ G        E +    VA   PG   +A    E    Q EN  N N   M+    GD  C   +++E +  E    N AP   S     + D   N D +   S+ N+ S+  +   + +      M+H   E    D DE      +++++K+ FLSSQ   S   V    WT+ N CVKC++ G+LLVC + GC L VHE CL    RFD+KG F CPFCA S++IS YL+AK K  LARK+L AF+                    G    ++ E+G    + ++ +   G+ N                                    + G +E   L  E +H     +Q++  A  K++ DN  ++N E    +N+ + EG  I + V+  Q +D  +K V +     E+S   ++K IIS++S + +   T +  SP   + LRRKK PWT  EEEML++GVQ+ A   D T+PWK+ILE+G+ VF   RT  DLK+KWR+MCK S  CK
Sbjct:   53 SEAMVRVTEDGSCHVEGESQAGGLGECRYSENDHSKFVAIERPGRSPNANADGEFQQYQCENDHNANN--MLPDASGDRPCQYTLVDEVNKAEPSTSNDAPSARSQQKVFAADTNANSDCNKVKSA-NADSSTEISRRITVEKADCRMEHFYEEDTSIDGDEYHHQRVDVAMEKSNFLSSQCTLSH--VSQESWTQLNLCVKCSEGGQLLVCNAVGCPLVVHEKCLGSSPRFDEKGDFYCPFCAYSLAISEYLQAKKKASLARKELGAFICRRTKRSHSNQQNNFKQNEDGCHLHMVHERGSLAEKEYDQTNNEGHANKVNDQLKKRQGDRQPMKPIISCLDVNLLDKEKEPNVIPGEKERKELAPECQHVRETDRQDQTCADPKSNGDNQMSKNKEVLVSLNEKQSEG-GIQRTVLEQQNSDLIEKPVGAIDIDRETSVEGNEKNIISNYSRKFRGRGT-EYVSPALPQILRRKKVPWTAKEEEMLKEGVQKFATVGDRTIPWKKILEYGSMVF-SHRTTVDLKDKWRNMCKGSSKCK 583          
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A067DQX6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0037502mg PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.477e-49
Identity = 154/469 (32.84%), Postives = 229/469 (48.83%), Query Frame = 2
Query:  410 SDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDG-----------NENGPPSRSD-DSNDENGNQEGNLIPQIKKNEE------LLGRNPIPSKRSRDEL----VAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGR-VELLDNQMENVQNDNTDMMVE-QKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFN----ISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQE-------QGRSWNHSKLNGNENLAGIQESGHL 1711
            SDL  AGPELL+WD H FI HKRA +PKCAL+ LKD IL     L             +E G     D D N +  +++ NL+P   +N +      L  RN +P KRSR ++    VA ++ G+        +CDL+ NAKK K   + A +    A+                       +I     GK +      RD+ VA R         +   L ++Q  +   DN D +    ++GD+    +  N++    N A +  +       +D    +    S+   G Q     +  + +++H C E+   D D   N    +++KK+ FLSSQ     D +  + WTEQN CVKCN++G+LL C+SS C LAVHE+CL  P +FD+KG+F CPFCA ++SIS YLEAK +  +ARK+L AFM  MG +  +         +   HS  NG+++   I E+G++
Sbjct:   14 SDLNIAGPELLKWDVHPFIMHKRALMPKCALQHLKDTILEGTHPLAASLKETSGLTCVSECGTARVGDLDHNAQAMSEKENLLPSTCENRDGQPRDNLHIRNMLPFKRSRGDMAIRDVAAHTNGV------QEKCDLNYNAKKHK---QDAISNHQSAD-----------------------QISVPTCGKETVEPLSGRDVAVAGREGSHFSNQSQDAGLEESQFPDDGCDNCDDLRRLGQNGDVNDDQIQHNQAEDGHNAARLPRAEPVQNATVDEANITERVPSV---GTQHEDTEDESRGEVEHSCEEETLSDNDAYHNDRIDVAVKKSHFLSSQAALGHDSLATSGWTEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCAYTLSISEYLEAKKRASVARKELAAFM-QMGSVCHQMDLANKLHSKDPGHSGSNGDKD---IHENGNV 443          

HSP 2 Score: 115.931 bits (289), Expect = 2.380e-23
Identity = 69/146 (47.26%), Postives = 96/146 (65.75%), Query Frame = 2
Query: 1787 NTETFPINQVEVEGDDILKEVVGPQITDASQK------LVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELAN-EDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203
            NT   P++  E E   + KE V P  +++S         +N D EE S S DDK+IIS++S R ++ +T  ++ P  +LRRKK PWT  EEE+L+KGVQ+ A+ +D  +PWK+ILEFG++VF   RTA DLK+KWR+MCK SP  K
Sbjct:  563 NTYVEPMDDTEAEAK-LQKEDVQPASSESSDPPESPVIALNIDEEEISESEDDKFIISNYSIRFRRPKTHYTYPPIPQLRRKKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFSGRTAIDLKDKWRNMCKGSPRSK 707          
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A059CYI3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C04382 PE=4 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.816e-46
Identity = 163/540 (30.19%), Postives = 248/540 (45.93%), Query Frame = 2
Query:  140 WLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPV-----SRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQ---------------------LKDVILLDDPYLDGNENGPPSRSDDSNDE---NGNQEGNLIPQIKKN-EELLG----RNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKAD-MDHPCVEQICEDEDEI----FNISLKKNLFLSSQHM--ASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQE 1636
            W WIIEY++ F Q+  S++ G+I+ AP LP  L +N  E V+LRCLEEL G +N  GS+        S+A ++ S SC +VL ++ ++       SDL+    ELL+WD HSF+ HKR ++PK ALE+                     L DV  L+   +    +   +R+ D  D    N   E NL+ +   + E L+G    R  +P+KR+  ++ A N   I    +     D H +AK++K   + +  I+   E P+                     + T  LG     G  +R++                 L+ + M  V +D    ++E      + P      S+ +E G  V +          HD    ++NS SA   +          D + H   E +  D DE      ++++KK+ FL SQ    +  +     DW+EQN C+KCN+ G+LLVC +S C L VHE+C+   A FD+ G F CPFCA S++IS Y +AK +    RK L AF+    K  QE
Sbjct:   13 WFWIIEYLAKFEQVKPSLLHGIIKAAPELPAHLGKNMEEVVSLRCLEELCGFRN--GSMNSTLSSLGSKAKIDTSKSCKNVLQYMFHN----GSASDLEVTANELLKWDLHSFLMHKRTSMPKTALEELKDTILAGTHPHADFLNKEGRLADVCHLNRTVIHNGGHTGFTRAPDVGDTYAPNTVDEPNLVSRPTNHVEPLVGDDGIRMCLPAKRNNTDVHAEN---IERNCNKDQHHDAHSDAKRAK--QQDSDEIKDREESPV---------------------VLTGRLGFERNDGCSDREM---------------ANLVKDHMGAVDDD---QLLEGDGRHYVQPKTCDVLSNGMEQGFSVDDPKRV------HDSIEKTKNSESARASEWGQTFTSNAKDYVVHVVGEDVSSDGDEYRKEEMDVTMKKHEFLYSQSQCPSPHNAFVMVDWSEQNVCMKCNEGGQLLVCNTSSCPLMVHENCVGLSAMFDNNGLFYCPFCAYSIAISEYHDAKKEASSTRKSLSAFIRAGLKHHQE 496          
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A068UNF0_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_43 OS=Coffea canephora GN=GSCOC_T00030653001 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.697e-43
Identity = 126/394 (31.98%), Postives = 187/394 (47.46%), Query Frame = 2
Query: 1172 DFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMG---------KLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTEN----TETFP-------------INQVEVEGDDILKEVVG-------PQITDASQKLVNSDGEE-------------------SSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELAN-EDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSP 2194
            +F  S   S S D +Q N D +      D+          DE  +I+LKK+  LSSQ   SQD       T+   CVKCN+ G+LLVC+S  C LAVH SCL   A FD  G F CPFCA S +IS Y++ K K   ARK L +F+G+           KL +E       ++ N +E+        H G +  +K +  P    +SD + + E     ++  P             +  V+VE   +   V G         + D ++    ++G++                    S+  D++  + S+S R ++     ++    +LRRK  PWT  EEE L++GVQ L++  D ++PWK+ILEFG +VF   RT  DLK+KWR++CK  P
Sbjct:  516 NFQLSFGGSGSKDDMQHNPDFDMTSDSDDY---------RDERMDIALKKDALLSSQCTYSQDSFA----TQAKYCVKCNKEGQLLVCSSDTCQLAVHSSCLPSAAHFDGNGKFYCPFCAYSRAISEYMQVKRKASFARKDLASFIGVQTVCQQKKATMKLGRESRNELQKNEGNNSEDFVNKVSDSHCGVKMGNKHQSEPPLSCSSDHSHSGEKVVSPSDGMPNTLVSGNLEPQCQLLGVQVEQPVVAHPVHGSDVDCKEAHMADRNEGNAGAEGKKVSEIPESALPQEPVCGPISESSEEDNEKSVRSYSIRLRRPIKNYTYPAIPQLRRKILPWTKAEEEKLKEGVQRLSSPHDRSIPWKQILEFGGDVFQRGRTTIDLKDKWRNICKGGP 896          

HSP 2 Score: 92.0485 bits (227), Expect = 9.234e-16
Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = 2
Query:  137 AWLWIIEYVSSFPQLDISIISGLIETAPILPED-LEENTSERVALRCLEELF--GPQNSHGSVAPVSRAV-LNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVIL 526
            AW W+IE +S   Q D S++  +I+ AP + +D L +N  E V+L+ LE L   G QN +   A V + + L+PS +C+DVL  I      ++   DL    PE+L  D  SFI HKRA+LPK AL++LKD IL
Sbjct:   12 AWSWVIEALSRSKQADTSLLIDIIKKAPEVSDDELGKNCREVVSLKILESLIVKGNQNKNKDAATVGQKLELDPSNNCEDVLRQI-----SEMSAMDLTAVAPEMLNGDVQSFIVHKRASLPKPALQKLKDAIL 140          
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: M5W2B4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026014mg PE=4 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.669e-40
Identity = 135/431 (31.32%), Postives = 218/431 (50.58%), Query Frame = 2
Query: 1046 MMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENV--DLNGEKAD-MDHPCVEQICEDE---DEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQE-QGRSWNHSKL---NGNENL-AGIQESGHLGREHEH--KQ-EELPAKL--------------------------KTSDDNPTTENTETFPINQVEVEGDDILKEVVGPQITDASQKL----------VNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELA-NEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCK 2185
            ++ E K     CP   I+ ++P ++    K+S+ +   N +H          SADG Q+    D   E  D + H   E + +++   DE  ++++KK+ FLSSQ  +S      ADWTE+N   K N++G+LL+C +S C + +HE+ L   A   +KG+F CPFC  S+ ++ YLEAK +  L +K L AF+  +    +E  GR  N       N +E+L     ++GHLG   E+  KQ EE P ++                          +  D++ T    +       + E + + +E +   +  +S+            VN D E+     + K   S +S R ++S+   S+  T +LRR K PW  +EEEML+KGV  ++ N++G +PWK+ILEFG +VFL  RT+ DLK+KWR++C+
Sbjct:  578 IVYEDKDDREHCPETRISGTAP-QDETQHKDSAKESDSNSEHVSRIEIACPASADGSQQKSIPDEAEELLDWLRHYESETLTDNDGFHDEKIDVAMKKHAFLSSQCTSSHRSSVTADWTERNLGKKSNESGQLLICKTSDCSVVLHENWLRSSAIHYEKGNFYCPFCVYSLDLTEYLEAKKETSLLKKDLDAFIHTLEHQPKECLGRPHNKENFCTRNFDEDLNEKSHQNGHLGEREENLGKQCEEHPKEVNDFQFQNITGNEQHVAPFASCVHVNSECGDESATAVCRKLDASTGEKEEEEKVARECIPVGVPLSSKNTENLHIDQGYEVNFDSEQVD---NQKSSTSKYSIRPRRSKNTYSYPATPQLRRIKVPWKVEEEEMLKKGVSTVSRNDEGNIPWKQILEFGGSVFLHSRTSIDLKDKWRNICR 1004          

HSP 2 Score: 133.265 bits (334), Expect = 1.536e-28
Identity = 96/260 (36.92%), Postives = 138/260 (53.08%), Query Frame = 2
Query:  137 AWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPV---SRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVIL-LDDPYLD------------GNE---NGPPSRSDD--SNDENGNQEGNLIPQIKKNEELLGR------NPIPSKRSRDELVAGNSKGIVSVNHGSM--QCDLHLNAKKSKLVAKPACTIQAVAELPI 829
            AWLW IE ++SF ++D+S++  LIE AP LP+D+ +N  ERVALRCLE L GP +   S  P    S+   + S SC++VL      I+ + P SDL+  GP LL+WD   FI HKRA+LPKCAL+QLKD I+    P+ D            G+     G  +R ++  S+ +N   +GN  P I +NE           N +PSK  R   +A +++ +   N  S+    D H+N+KK K             +LP+
Sbjct:   12 AWLWAIEALASFREVDVSLLHDLIEMAPALPDDMGKNAKERVALRCLEGLLGPCDVMSSDVPSAQHSKCSFDLSESCENVLK----RIVDETPESDLRVGGPGLLKWDIRPFIIHKRASLPKCALKQLKDSIIDGTHPHADFLRVKSGLTRSYGDRVPVGGSNTRLNESCSSAQNMGVKGNSDPLIHQNENKPSEEDPDNANLLPSKGDR---IASDAENMEDENRSSINDSDDWHINSKKMKQDGSYVLRTTEQNQLPL 264          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067DRC6_CITSI1.024e-7435.15Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4S792_9ROSI2.728e-7334.97Uncharacterized protein OS=Citrus clementina GN=CI... [more]
B9SL53_RICCO1.563e-6633.96Putative uncharacterized protein OS=Ricinus commun... [more]
A0A067K2H5_JATCU1.951e-6434.30Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
M5WWX5_PRUPE3.991e-5733.33Uncharacterized protein (Fragment) OS=Prunus persi... [more]
A0A067KG49_JATCU2.370e-5332.28Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A067DQX6_CITSI9.477e-4932.84Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A059CYI3_EUCGR3.816e-4630.19Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A068UNF0_COFCA6.697e-4331.98Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
M5W2B4_PRUPE8.669e-4031.32Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 298..318
NoneNo IPR availablePANTHERPTHR21717:SF18HOMEODOMAIN-LIKE PROTEIN WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAINcoord: 421..694
NoneNo IPR availablePANTHERPTHR21717TELOMERIC REPEAT BINDING PROTEINcoord: 421..694
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 431..476
e-value: 3.8E-4
score: 29.8
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 637..694
e-value: 7.0E-12
score: 44.6
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 635..694
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 414..480
e-value: 3.9E-8
score: 32.2
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 432..475
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 633..693
score: 7.956
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 419..480

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0005590 ID=g.arboreum_cottongen_reftransV1_0005590; Name=g.arboreum_cottongen_reftransV1_0005590; organism=Gossypium arboreum; type=contig; length=2426bp
AGAAAGAACACATTGTTTCCCGGCACTCAAGTGATACTCTTCTCTTTGAA
ATATTTCAATGGATTCTTAAGGTAAATCAAGTGCTTGCTCTTGACTTGGT
CCGATGTTTCGCCCTTACTCTTATGGTCCAAGAGCTGCATGGCTTTGGAT
CATTGAGTACGTATCAAGCTTTCCCCAGCTAGATATTTCCATTATATCCG
GTCTGATTGAAACAGCTCCAATTTTACCAGAGGACCTAGAAGAAAATACA
AGTGAAAGGGTTGCTTTAAGATGCTTGGAGGAGTTATTTGGTCCTCAAAA
CAGTCATGGAAGTGTTGCTCCCGTTTCAAGAGCTGTTTTGAATCCTTCTG
CAAGCTGCGATGATGTTCTTGATCACATACTGTATCACATACTGCAAAAG
GTCCCATTATCTGATCTGAAAAATGCTGGACCAGAGCTTTTGAGATGGGA
TGGTCACTCCTTTATTGAGCATAAAAGAGCCACCCTACCTAAATGTGCAT
TAGAACAGTTGAAAGATGTTATTTTGCTGGACGACCCTTATCTTGATGGC
AATGAAAATGGGCCTCCATCACGGTCTGATGACAGCAATGATGAAAATGG
TAATCAAGAGGGTAACTTGATTCCACAAATTAAAAAAAATGAAGAGTTGC
TTGGAAGAAATCCAATTCCGTCGAAGAGGTCTAGAGATGAGTTGGTTGCT
GGAAATTCGAAGGGAATAGTCAGTGTTAACCATGGTAGTATGCAATGTGA
TCTTCATTTGAATGCAAAGAAGTCAAAGCTAGTTGCGAAGCCCGCTTGTA
CTATTCAGGCTGTTGCGGAGCTTCCAATTCACCTGCATGATGATGATGAG
CGGTTGGAAGATGAATCTCAAAGGATTATGAAGGTTACTGAAATAGGGAC
TAATAACTTGGGAAAGGTTTCTCAGATAGGTGAGGGTAATCGAGATTTAT
GTGTTGCCTCAAGGACCCCTGGGCTGATTGATGCTGTTGGTCGTGTGGAA
TTGCTGGACAATCAGATGGAAAATGTTCAAAATGATAATACTGACATGAT
GGTCGAGCAAAAGCATGGAGATATAATTTGCCCAAATGTTGTGATTAACG
AATCCAGTCCTGTTGAAAATGGTGCACCGGTAAAGGAATCTAGTGGTGAT
GTGGGTGGAAATATTGATCACGATTTTACATCAAGTTCCCAAAATTCTAT
CTCCGCTGATGGGTTACAAGAAAATGTTGATCTGAATGGGGAAAAAGCTG
ACATGGATCATCCTTGTGTGGAACAGATATGCGAAGATGAAGATGAGATC
TTTAACATTTCCTTAAAGAAGAACCTTTTCTTGAGTTCACAGCACATGGC
TAGTCAAGATCCTGTTCAAAATGCTGACTGGACAGAACAAAATTCTTGTG
TCAAGTGTAATCAAAATGGTCGGTTGTTGGTCTGTACTTCTAGTGGTTGC
CTGCTTGCGGTTCATGAGAGCTGCTTGAATTGCCCTGCAAGATTTGATGA
TAAGGGCCACTTTCTTTGCCCTTTCTGTGCATGCTCTGTTTCCATCTCAA
ATTATCTAGAAGCTAAGAACAAGATCATCTTGGCAAGGAAGAAACTAGTT
GCATTTATGGGGCTTATGGGAAAACTTATTCAGGAGCAGGGGAGGTCTTG
GAATCATTCAAAATTAAATGGCAATGAAAACCTTGCTGGAATTCAGGAGA
GTGGGCATCTAGGGAGAGAGCATGAACACAAACAGGAAGAACTACCAGCC
AAGCTTAAAACCTCTGATGATAATCCAACCACTGAAAACACTGAAACTTT
CCCCATAAATCAGGTAGAAGTTGAAGGAGATGACATACTAAAGGAAGTTG
TAGGGCCTCAGATTACTGATGCAAGTCAGAAACTTGTCAATAGTGATGGA
GAGGAATCATCTACCAGTGCAGATGATAAGTATATAATATCTAGTCATTC
TACAAGGTCCAAAAAAAGTGAAACAAGGCAATCATTCTCGCCAACTCGAC
GATTGAGAAGAAAGAAAGCTCCATGGACGAATGACGAAGAAGAGATGCTC
AGGAAGGGAGTGCAGGAGCTTGCAAATGAGGATGGGACAGTTCCATGGAA
GAGAATTTTGGAGTTTGGTACCAATGTGTTTCTTATGGATAGGACTGCAA
CAGACCTCAAGAATAAGTGGAGAAGTATGTGCAAGGATAGCCCGGGATGC
AAATGATATGATGTCACAGCCTTGTGATTTTGCATATAAGATGATGTGAT
TTATATATCTCGGTTAAGTCATCTCTTTTTGTTTTAAAGGAAGTAGGTGA
GTTCAATAGCTCTGTTATGATTTACTGTATTCAGGGCTACAGCATAAGTA
ATAGGAAGTTGGAAATGGGTTTTCCCCCTGTTTTTGTCTTTTGTGAAATG
AAATACTTGTTTGGCTTTGATGGAAT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR009057Homeobox-like_sf
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR017877Myb-like_dom
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO:0003677DNA binding