PD6992 x SM3, F2:3 (2005)

Map Overview


Name	PD6992 x SM3, F2:3 (2005)
Species	Gossypium hirsutum
Analysis method	Composite interval mapping
Software	MapMaker v3.0b
Map type	genetic
Population type	F2:3
Genome group	AD
Map unit	cM
Maternal parent	PD 6992
Paternal parent	Simian-3
Number of loci	71
Number of QTL	11
Number of linkage groups	21
Publication	[view all]
Contact	Zhang, Tian-Zhen

Stock

Name

Type

Details

PD6992 x SM3, F2:3

population

Secondary id:	cdbpop_000115
Alias:	3
Pedigree:	PD 6992 / Simian-3

Contact

Name

Details

Zhang, Tian-Zhen

First name:	Tian-Zhen
Last name:	Zhang
Title:	Professor
Institution:	Zhejiang University
Address:	College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:	China
Email:	cotton@zju.edu.cn
Phone:	+86 571 88982971
Fax:	+86 571 88982971
Keywords:	cotton genetics and genomics, and breeding
Last update:	18-Mar-2022

Publication


Year	Publications
2005	Shen X, Guo W, Zhu X, Yuan Y, Yu J, Kohel R, Zhang T. Molecular mapping of QTLs for fiber qualities in three diverse lines in Upland cotton using SSR markers. Molecular breeding : new strategies in plant improvement. 2005; 15(2):169-181.

Map Loci

This map contains 71 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
PD6992 x SM3, F2:3 (2005).chr18	BNL3280	BNL3280	marker_locus	18.6 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-1	NAU0833	NAU833	marker_locus	0 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-1	NAU0828	NAU828	marker_locus	0.7 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-1	NAU1269	NAU1269	marker_locus	0.8 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-1	NAU1255	NAU1225	marker_locus	0.8 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-1	NAU1225	NAU1225	marker_locus	0.8 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-1	NAU1230	NAU1230	marker_locus	0.8 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-1	NAU1187	NAU1187	marker_locus	0.9 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-1	NAU1221	NAU1221	marker_locus	0.9 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-1	NAU0797	NAU797	marker_locus	4.9 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-2	JESPR0236	JESPR236a	marker_locus	0 cM
PD6992 x SM3, F2:3 (2005).chr19/LGD08-2	JESPR0236	JESPR236b	marker_locus	1.1 cM
PD6992 x SM3, F2:3 (2005).chr23	NAU0418	NAU418	marker_locus	0 cM
PD6992 x SM3, F2:3 (2005).chr23	NAU1047	NAU1047	marker_locus	13.1 cM
PD6992 x SM3, F2:3 (2005).chr23	JESPR0208	JESPR208	marker_locus	20.5 cM
PD6992 x SM3, F2:3 (2005).chr23	BNL1414	BNL1414	marker_locus	24.2 cM
PD6992 x SM3, F2:3 (2005).chr23	BNL1317	BNL1317	marker_locus	40.9 cM
PD6992 x SM3, F2:3 (2005).chr25	BNL0827	BNL827	marker_locus	0 cM
PD6992 x SM3, F2:3 (2005).chr25	NAU1241	NAU1241	marker_locus	9.7 cM
PD6992 x SM3, F2:3 (2005).chr26	BNL3994	BNL3994	marker_locus	0 cM
PD6992 x SM3, F2:3 (2005).chr26	JESPR0234	JESPR234	marker_locus	13 cM
PD6992 x SM3, F2:3 (2005).chr26	nau0736	NAU736	marker_locus	57.3 cM

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Map QTL

This map contains 11 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
PD6992 x SM3, F2:3 (2005).chr07-1	qFEL.PDSM-F2:3_ch07-1.jp02	QTL	41.1 cM	66.5 cM	-
PD6992 x SM3, F2:3 (2005).chr08/LGA02	qFEL.PDSM-F2:3_ch08.jp02	QTL	0 cM	12.7 cM	-
PD6992 x SM3, F2:3 (2005).chr08/LGA02	qFEL.PDSM-F2:3_ch08.jp03	QTL	12.7 cM	13.1 cM	-
PD6992 x SM3, F2:3 (2005).chr07-1	qFL.PDSM-F2:3_ch07-1.jp02	QTL	75.7 cM	86.4 cM	-
PD6992 x SM3, F2:3 (2005).chr16	qFL.PDSM-F2:3_ch16.jp02	QTL	0 cM	42.3 cM	-
PD6992 x SM3, F2:3 (2005).chr18	qFL.PDSM-F2:3_ch18.jp03	QTL	3.9 cM	17 cM	-
PD6992 x SM3, F2:3 (2005).chr08/LGA02	qFS.PDSM-F2:3_ch08.jp03	QTL	0 cM	12.7 cM	-
PD6992 x SM3, F2:3 (2005).chr11/LGA03-1	qFS.PDSM-F2:3_ch11-1.jp02	QTL	0 cM	3.4 cM	-
PD6992 x SM3, F2:3 (2005).chr16	qFS.PDSM-F2:3_ch16.jp02	QTL	0 cM	42.3 cM	-
PD6992 x SM3, F2:3 (2005).chr11/LGA03-1	qMIC.PDSM-F2:3_ch11-1.jp02	QTL	0 cM	3.4 cM	-
PD6992 x SM3, F2:3 (2005).chr14	qMIC.PDSM-F2:3_ch14.jp02	QTL	0 cM	32.9 cM	-

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PD6992 x SM3, F2:3 (2005)