CCRI-35 x NH, F2:3 (2018)

Map Overview

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NameCCRI-35 x NH, F2:3 (2018)
SpeciesGossypium hirsutum
Analysis methodcomposite interval mapping
SoftwareJoinMap 4.1
Map typegenetic
Population typeF2:3
Population size277
Genome groupAD
Map unitcM
Maternal parentZhong Mian Suo 35
Paternal parentNandan Badi Big Flower
Population size277
Number of loci5178
Number of QTL263
Number of linkage groups26
Publication[view all]
ContactDu, Xiong-Ming
Map Loci
This map contains 5,178 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_MulMa21-m_A01MulMa21-m_A01marker_locus0 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_MulMa20_A01MulMa20_A01marker_locus0.55 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_MulMa23-m_A01MulMa23-m_A01marker_locus0.64 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_MulMa22-m_A01MulMa22-m_A01marker_locus0.67 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_MulMa18-m_A01MulMa18-m_A01marker_locus0.98 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_MulMa19-m_A01MulMa19-m_A01marker_locus1.13 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_MulMa16_A01MulMa16_A01marker_locus1.41 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_MulMa15-m_A01MulMa15-m_A01marker_locus1.41 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_MulMa17_A01MulMa17_A01marker_locus1.41 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk378_A01mk378_A01marker_locus6.27 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk379_A01mk379_A01marker_locus6.38 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk530_A01mk530_A01marker_locus14.31 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk611_A01mk611_A01marker_locus14.58 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk729_A01mk729_A01marker_locus15.04 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk732_A01mk732_A01marker_locus15.28 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk733_A01mk733_A01marker_locus15.28 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk734_A01mk734_A01marker_locus15.28 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk602_A01mk602_A01marker_locus15.49 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk737_A01mk737_A01marker_locus15.88 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk736_A01mk736_A01marker_locus16.01 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk735_A01mk735_A01marker_locus16.11 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk539_A01mk539_A01marker_locus16.58 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk538_A01mk538_A01marker_locus16.58 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk537_A01mk537_A01marker_locus16.58 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01CCRI_SNP_mk740_A01mk740_A01marker_locus16.84 cM
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Map QTL
This map contains 263 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01qCB.CN-F2:3_ch01.ay14.1QTL80.93 cM84 cM82.91 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01qCRD.CN-F2:3_ch01.ay14.1QTL107.42 cM108.03 cM107.61 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01qCRD.CN-F2:3_ch01.ay14.2QTL124.61 cM124.73 cM124.71 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01qCRD.CN-F2:3_ch01.ay14.3QTL132.16 cM134.67 cM133.21 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01qCB.CN-F2:3_ch01.ay14.2QTL136.2 cM144.71 cM138.21 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr01qFL.CN-F2:3_ch01.ay15QTL145.26 cM145.82 cM145.31 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qFS.CN-F2:3_ch02.ay15QTL0 cM17.85 cM5.01 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qFSCI.CN-F2:3_ch02.ay14-16.1QTL0 cM17.85 cM1.01 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qFSCI.CN-F2:3_ch02.ay15QTL0 cM17.85 cM1.01 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qFSCI.CN-F2:3_ch02.ay16QTL0 cM17.85 cM1.01 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qFU.CN-F2:3_ch02.ay16QTL0 cM17.85 cM0.01 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qFEL.CN-F2:3_ch02.ay15QTL45.8 cM47.57 cM45.81 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qMIC.CN-F2:3_ch02.ay14.1QTL133.04 cM133.29 cM133.11 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qMIC.CN-F2:3_ch02.ay14-16.1QTL133.04 cM133.29 cM133.11 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qMIC.CN-F2:3_ch02.ay14-16.2QTL138.04 cM138.32 cM138.31 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qMIC.CN-F2:3_ch02.ay14.2QTL138.38 cM138.38 cM138.31 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qMIC.CN-F2:3_ch02.ay14.3QTL159.05 cM164.07 cM163.11 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qMIC.CN-F2:3_ch02.ay14-16.3QTL159.05 cM164.07 cM163.11 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qMIC.CN-F2:3_ch02.ay16QTL164.07 cM164.53 cM164.11 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qFSCI.CN-F2:3_ch02.ay14-16.2QTL334.26 cM337.05 cM336.31 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr02qFL.CN-F2:3_ch02.ay14-16QTL337.05 cM337.3 cM337.11 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr03qFS.CN-F2:3_ch03.ay14-16.1QTL20.8 cM20.82 cM20.81 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr03qFS.CN-F2:3_ch03.ay16QTL23.74 cM24.74 cM23.81 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr03qFS.CN-F2:3_ch03.ay14-16.2QTL27.39 cM34.67 cM29.41 cM
CCRI-35 x NH, F2:3 (2018).CN-F2:3_chr03qFS.CN-F2:3_ch03.ay15QTL41.75 cM47.75 cM41.81 cM
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Contact
NameDetails
Du, Xiong-Ming
Description:Cotton germplasm maitanence, identification, evaluation, enhancement; ; Cotton genetics, and molecular biology
First name:Xiong-Ming
Last name:Du
Title:Dean
Institution:Germplasm Division of Cotton Research Institute of CAAS
Address:huanghedadao,Kaifaqu, Anyang, Henan 455000
Country:China
Email:dxm630723@163.com
Phone:86-372-2562252
Fax:86-372-2562256
Keywords:Cotton Germplasm
Last update:1-Feb-2008
Stock
NameTypeDetails
CCRI-35 x NH, F2:3population
Secondary id:cdbpop_000156
Origin detail:China
Population size:277
Cultivar:3
Pedigree:Zhong Mian Suo 35 / Nandan Badi Big Flower
Publication
YearPublications
2018Diouf L, Magwanga RO, Gong W, He S, Pan Z, Jia YH, Kirungu JN, Du X. QTL Mapping of Fiber Quality and Yield-Related Traits in an Intra-Specific Upland Cotton Using Genotype by Sequencing (GBS). International journal of molecular sciences. 2018 Feb 01; 19(2).
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