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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr06 | NAU5434 | NAU5434 | marker_locus | 34.66 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_TCC/em_ACT | TCCACT-620 | marker_locus | 35.45 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_GGA/em_TCA | GGATCA-550 | marker_locus | 35.87 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_CTG/em_GGA | CTGGGA-1300 | marker_locus | 36.65 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_GCA/em_CGG | GCACGG-930 | marker_locus | 37.29 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_TAG/em_CTT | TAGCTT-680 | marker_locus | 37.66 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_GTA/em_ACA | GTAACA-450 | marker_locus | 37.74 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | HAU-DJ-I092 | HAU-DJ-I092 | marker_locus | 38.41 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_CGA/em_TCT | CGATCT-1250 | marker_locus | 38.9 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_GCA/em_GGG | GCAGGG-230 | marker_locus | 40 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_GCA/em_CGG | GCACGG-950 | marker_locus | 40.78 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | HAU-DJ-I044 | HAU-DJ-I044 | marker_locus | 43.31 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_TAA/em_TCC | TAATCC-300 | marker_locus | 45.02 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_AAG/em_TAG | AAGTAG-300 | marker_locus | 55.65 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_ATA/em_CTG | ATACTG-180 | marker_locus | 55.9 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | STV0045 | STV045 | marker_locus | 58.04 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | HAU-D5104 | HAU-D5104-SSCP | marker_locus | 60.76 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_CGC/em_ATT | CGCATT-1400 | marker_locus | 70.3 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | S0277 | S277b | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | CER0028 | MON_CER0028 | marker_locus | 4.75 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | TMB1898 | TMB1898 | marker_locus | 7.11 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | HAU4589 | HAU4589 | marker_locus | 11.97 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | CGR5851 | MON_CGR5851a | marker_locus | 15.75 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | me_GAC/em_GGG | GACGGG-180 | marker_locus | 16.51 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | NAU3639 | NAU3639 | marker_locus | 19.57 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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