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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr06 | BNL1440 | BNL1440 | marker_locus | 13.85 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_CTG/em_TGA | CTGTGA-1500 | marker_locus | 17.32 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_TTG/em_TGT | TTGTGT-150 | marker_locus | 19.05 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_GTG/em_CAA | GTGCAA-1100 | marker_locus | 20.25 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | HAU-DJ-S276 | HAU-DJ-S276 | marker_locus | 20.75 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_TAT/em_TTT | TATTTT-900 | marker_locus | 21.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | HAU2625 | HAU2625 | marker_locus | 22.45 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | CGR6935 | MON_CGR6935 | marker_locus | 23.61 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_GGA/em_GCT | GGAGCT-340 | marker_locus | 23.94 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_AAA/em_TGC | AAATGC-600 | marker_locus | 24.31 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_ACA/em_GTA | ACAGTA-450 | marker_locus | 24.62 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | NAU2687 | nau2687 | marker_locus | 25.18 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_AAG/em_CAG | AAGCAG-300 | marker_locus | 25.43 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | HAU-DJ-I050 | HAU-DJ-I050 | marker_locus | 25.99 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_TAC/em_CGA | TACCGA-500 | marker_locus | 26.21 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_TCG/em_CTT | TCGCTT-160 | marker_locus | 26.35 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_GAC/em_GGG | GACGGG-430 | marker_locus | 26.53 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_TCA/em_CTT | TCACTT-250 | marker_locus | 26.63 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | HAU-DJ-S168 | HAU-DJ-S168 | marker_locus | 27.22 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_TTG/em_GAC | TTGGAC-920 | marker_locus | 27.46 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_GAC/em_TAA | GACTAA-300 | marker_locus | 27.77 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | HAU-DJ-I039 | HAU-DJ-I039 | marker_locus | 28.08 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_GAG/em_TGT | GAGTGT-500 | marker_locus | 28.33 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | BNL1169 | BNL1169 | marker_locus | 28.8 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_CGT/em_AGT | CGTAGT-1000 | marker_locus | 29 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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