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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr05-1 | COT130 | MON_COT130 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-1 | HAU-DJ-S248 | HAU-DJ-S248 | marker_locus | 15.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-1 | me_TCG/em_ATG | TCGATG-1150 | marker_locus | 18.44 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-1 | HAU-DJ4981 | HAU-DJ4981 | marker_locus | 38.91 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-1 | me_ACC/em_GTT | ACCGTT-180 | marker_locus | 47.46 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-1 | HAU-DJ-S172 | HAU-DJ-S172 | marker_locus | 49.85 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-1 | JESPR0181 | JESPR181 | marker_locus | 54.81 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-1 | CGR6756 | MON_CGR6756 | marker_locus | 56.51 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-1 | me_AAG/em_ATC | AAGATC-650 | marker_locus | 71.36 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-2 | CGR6685 | MON_CGR6685 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-2 | HAU0042 | HAU042 | marker_locus | 13.94 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-2 | CGR6760 | MON_CGR6760 | marker_locus | 16.41 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-2 | NAU4057 | NAU4057 | marker_locus | 37.8 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-2 | NAU2121 | NAU2121 | marker_locus | 43.97 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-2 | TMB1933 | TMB1933 | marker_locus | 62.9 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-2 | BNL3447 | BNL3447 | marker_locus | 64.33 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-3 | CER0060 | MON_CER0060 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-3 | HAU-D5505 | HAU-D5505 | marker_locus | 15.53 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-3 | HAU1384 | HAU1384 | marker_locus | 22.27 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-3 | HAU1385 | HAU1385 | marker_locus | 27.08 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-3 | HAU-DJ4976 | HAU-DJ4976 | marker_locus | 37.25 cM |
DH962 X Ji Mian 5, F2 (2015).chr05-3 | HAU2185 | HAU2185 | marker_locus | 49.1 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | DPL0500 | MON_DPL0500 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | me_ACA/em_AAA | ACAAAA-1400 | marker_locus | 6.68 cM |
DH962 X Ji Mian 5, F2 (2015).chr06 | HAU0921 | HAU0921 | marker_locus | 9.59 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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