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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CAT/em_ACT | CATACT-1200 | marker_locus | 52.99 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CAT/em_CCA | CATCCA-1100 | marker_locus | 53.09 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_AGC/em_CTC | AGCCTC-280 | marker_locus | 53.16 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TCA/em_TAG | TCATAG-620 | marker_locus | 53.39 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GAC/em_GCA | GACGCA-480 | marker_locus | 53.4 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TAG/em_AAC | TAGAAC-480 | marker_locus | 53.43 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-DJ-S377 | HAU-DJ-S377 | marker_locus | 53.58 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-DJ-I059 | HAU-DJ-I059 | marker_locus | 53.65 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-DJ-S249 | HAU-DJ-S249 | marker_locus | 53.73 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | DPL0686 | MON_DPL0686 | marker_locus | 53.85 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-DJ-S342 | HAU-DJ-S342 | marker_locus | 53.96 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-DJ-S320 | HAU-DJ-S320 | marker_locus | 54.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | CGR5537 | MON_CGR5537 | marker_locus | 54.45 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | DPL0849 | MON_DPL0849 | marker_locus | 54.65 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GTT/em_CCA | GTTCCA-150 | marker_locus | 54.74 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-DJ-I080 | HAU-DJ-I080 | marker_locus | 54.95 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-J5787 | HAU-J5787 | marker_locus | 55.13 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CTT/em_GGC | CTTGGC-900 | marker_locus | 55.53 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-DJ-I089 | HAU-DJ-I089 | marker_locus | 55.8 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TCA/em_TGC | TCATGC-200 | marker_locus | 56.15 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | CGR5161 | MON_CGR5161 | marker_locus | 56.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-DJ-I082 | HAU-DJ-I082 | marker_locus | 57.06 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CTT/em_GTG | CTTGTG-800 | marker_locus | 58.21 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | CER0152 | MON_CER0152 | marker_locus | 58.64 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | NAU2914 | nau2914 | marker_locus | 59.18 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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