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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CAA/em_GTC | CAAGTC-200 | marker_locus | 50.52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_ATC/em_TAG | ATCTAG-800 | marker_locus | 50.54 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CTC/em_GGC | CTCGGC-900 | marker_locus | 50.76 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GAC/em_TTT | GACTTT-430 | marker_locus | 50.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GCT/em_AGT | GCTAGT-1050 | marker_locus | 50.92 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TTG/em_CGC | TTGCGC-250 | marker_locus | 50.99 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TCA/em_CAC | TCACAC-120 | marker_locus | 51.09 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TTG/em_TGT | TTGTGT-400 | marker_locus | 51.18 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TCT/em_GTG | TCTGTG-450 | marker_locus | 51.21 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | S0257 | S257 | marker_locus | 51.29 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GTT/em_CTG | GTTCTG-180 | marker_locus | 51.31 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GCT/em_CAT | GCTCAT-150 | marker_locus | 51.55 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_AAC/em_TTA | AACTTA-800 | marker_locus | 51.61 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TAG/em_AGC | TAGAGC-160 | marker_locus | 51.65 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU1905 | HAU1905 | marker_locus | 51.84 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CCT/em_CGG | CCTCGG-1000 | marker_locus | 51.99 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | Gh532 | Gh532 | marker_locus | 52.22 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | BNL1664 | BNL1664 | marker_locus | 52.4 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CTG/em_GAT | CTGGAT-100 | marker_locus | 52.55 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | BNL3257 | BNL3257 | marker_locus | 52.6 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_ATA/em_TCT | ATATCT-1300 | marker_locus | 52.71 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_AGC/em_ACG | AGCACG-520 | marker_locus | 52.78 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_ACC/em_AAC | ACCAAC-450 | marker_locus | 52.85 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CAG/em_AAC | CAGAAC-300 | marker_locus | 52.94 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | S0303 | S303 | marker_locus | 52.98 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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