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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr08 | DPL0488 | MON_DPL0488 | marker_locus | 21.07 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | SHIN-0352 | MON_SHIN-0352 | marker_locus | 22.24 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU2756 | HAU2756 | marker_locus | 26.51 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | DPL0176 | DPL0176 | marker_locus | 27.62 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | DC20094 | MON_DC20094 | marker_locus | 30.06 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | CGR5542 | MON_CGR5542 | marker_locus | 30.75 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TTC/em_ACT | TTCACT-750 | marker_locus | 32.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CCA/em_TTG | CCATTG-280 | marker_locus | 35.18 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU2524 | HAU2524 | marker_locus | 36.08 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GTA/em_AGA | GTAAGA-700 | marker_locus | 37.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CTT/em_TTC | CTTTTC-900 | marker_locus | 37.44 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GTG/em_TTG | GTGTTG-950 | marker_locus | 39.73 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TAC/em_TGT | TACTGT-550 | marker_locus | 40.46 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CTT/em_TCA | CTTTCA-1300 | marker_locus | 41.27 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TCC/em_AAG | TCCAAG-150 | marker_locus | 42.15 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GTC/em_ATG | GTCATG-950 | marker_locus | 42.85 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GCT/em_ACT | GCTACT-350 | marker_locus | 43.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_AAG/em_AGA | AAGAGA-230 | marker_locus | 44.19 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-D5190 | HAU-D5190-SSCP | marker_locus | 44.61 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | Gh634 | Gh634 | marker_locus | 44.96 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GAT/em_AGC | GATAGC-950 | marker_locus | 45.38 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TGC/em_CGG | TGCCGG-1000 | marker_locus | 45.5 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GGT/em_CTG | GGTCTG-400 | marker_locus | 45.92 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TTC/em_TCA | TTCTCA-430 | marker_locus | 46.25 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CAG/em_GAT | CAGGAT-430 | marker_locus | 46.33 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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