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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | NAU2862 | NAU2862 | marker_locus | 106.75 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | NAU2931 | NAU2931 | marker_locus | 107.54 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | Gh345 | GH345 | marker_locus | 108.31 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | HAU-J5593 | HAU-J5593 | marker_locus | 110.76 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | Gh056 | GH056 | marker_locus | 114.56 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | me_ACC/em_TTA | ACCTTA-220 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | BNL1694 | BNL1694 | marker_locus | 3.32 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | HAU-D4999 | HAU-D4999 | marker_locus | 4.6 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | HAU-D5232 | HAU-D5232-SSCP | marker_locus | 7.91 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | CGR6764 | MON_CGR6764a | marker_locus | 11.98 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | me_TAC/em_ATA | TACATA-1200 | marker_locus | 17.17 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | HAU3037 | HAU3037 | marker_locus | 30.19 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | HAU3808 | HAU3808 | marker_locus | 34 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | HAU-DJ-I008 | HAU-DJ-I008 | marker_locus | 45.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | me_CTC/em_GTG | CTCGTG-700 | marker_locus | 46.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | DPL0603 | MON_DPL0603 | marker_locus | 64.75 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | HAU-D5225 | HAU-D5225 | marker_locus | 70.78 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-3 | DC20036 | MON_DC20036 | marker_locus | 78.68 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU3177 | HAU3177 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TAT/em_CCA | TATCCA-1000 | marker_locus | 6.13 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-J5894 | HAU-J5894 | marker_locus | 10.41 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | TMB1715 | TMB1715 | marker_locus | 11.73 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | BNL3255 | BNL3255 | marker_locus | 15.09 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | COT065 | MON_COT065 | marker_locus | 15.69 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | NAU1037 | NAU1037 | marker_locus | 17.7 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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