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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | me_CAA/em_TGT | CAATGT-850 | marker_locus | 121.54 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | HAU-DJ-S281 | HAU-DJ-S281 | marker_locus | 128.95 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | HAU-DJ-S179 | HAU-DJ-S179 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | me_CTT/em_CCT | CTTCCT-680 | marker_locus | 17.23 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | HAU-DJ4982 | HAU-DJ4982 | marker_locus | 24.18 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | HAU2688 | HAU2688b | marker_locus | 39.2 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | HAU2689 | HAU2689 | marker_locus | 39.2 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | HAU2688 | HAU2688a | marker_locus | 39.73 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | HAU-DJ-I091 | HAU-DJ-I091 | marker_locus | 50.36 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | me_AAG/em_ACC | AAGACC-220 | marker_locus | 58.77 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | me_CTG/em_GAT | CTGGAT-750 | marker_locus | 59.27 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | HAU-DJ-S201 | HAU-DJ-S201 | marker_locus | 62.52 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | me_TCA/em_GTC | TCAGTC-250 | marker_locus | 69.81 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | me_GTC/em_CAG | GTCCAG-1080 | marker_locus | 70.71 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | BNL1026 | BNL1026 | marker_locus | 71.58 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | me_TGT/em_TCA | TGTTCA-1300 | marker_locus | 73.73 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | CM0060 | CM60 | marker_locus | 74.41 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | me_TCT/em_CTA | TCTCTA-1050 | marker_locus | 74.47 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | BNL2441 | BNL2441 | marker_locus | 74.73 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | HAU-DJ-I103 | HAU-DJ-I103 | marker_locus | 77.27 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | me_CGT/em_AAA | CGTAAA-680 | marker_locus | 80.16 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | NAU6634 | NAU6634 | marker_locus | 83.61 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | me_TTG/em_TTG | TTGTTG-700 | marker_locus | 84.82 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | NAU5120 | nau5120 | marker_locus | 104.41 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | NAU2820 | NAU2820 | marker_locus | 106.75 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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