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Stock
Name | Type | Details |
HS-46 x MARCABUCAG8US-1-88, F2:3 | population | Alias: | 3 | Description: | genetic mapping | Population size: | 96 | Secondary id: | cdbpop_000025 | Pedigree: | HS-46 / MARCABUCAG8US 1-88 |
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Publication
Year | Publications |
1998 | Shappley Z, Jenkins J, Meredith W, McCarty JJ. An RFLP linkage map of Upland cotton, Gossypium hirsutum L. Theoretical and applied genetics. 1998 Oct; 97(5/6):756-761. |
1998 | Quantitative trait loci associated with agronomic and fiber traits of upland cotton. |
2002 | Ulloa M, Meredith WJ, Shappley Z, Kahler A. RFLP genetic linkage maps from four F2.3 populations and a joinmap of Gossypium hirsutum L. Theoretical and applied genetics. 2002 Feb; 104(2/3):200-208 |
2005 | Ulloa M, Saha S, Jenkins JN, Meredith WR, McCarty JC, Stelly DM. Chromosomal Assignment of RFLP Linkage Groups Harboring Important QTLs on an Intraspecific Cotton (Gossypium hirsutum L.) Joinmap. Journal of heredity. 2005; 96(2):132-144 |
Map Loci
This map contains 120 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg01 | C5E5 | C5E5RV | marker_locus | 0 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg01 | C76E3 | C76E3RV | marker_locus | 0.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg02 | C21E1 | C21E1RV | marker_locus | 0 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg02 | C16C1 | C16C1RV | marker_locus | 3 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg03 | C41F5 | C41F5RI | marker_locus | 0 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg03 | C24A4 | C24A4RI | marker_locus | 3.9 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg03 | C81A5 | C81A5RI | marker_locus | 49.1 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | C116C6 | C116C6RI | marker_locus | 0 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | C121B1 | C121B1RI | marker_locus | 32 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | C44B4 | C44B4RV | marker_locus | 34.4 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | C46F1 | C46F1RI | marker_locus | 40.6 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | C34E3 | C34E3RV | marker_locus | 57.9 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | C108C5 | C108C5RV | marker_locus | 88.2 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | C42E4 | C42E4RI | marker_locus | 100.6 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | C56E1 | C56E1RIB | marker_locus | 102.2 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | C112E4 | C112E4RI | marker_locus | 103.8 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | C111A6 | C111A6RI | marker_locus | 107.7 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg05 | C56D6 | C56D6RV | marker_locus | 0 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg05 | F12D4 | F12D4RV | marker_locus | 4.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | C54B3 | C54B3RI | marker_locus | 0 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | C16A1 | C16A1RI | marker_locus | 7.1 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | C56A6 | C56A6RIB | marker_locus | 41.7 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | C79F2 | C79F2RIB | marker_locus | 44.2 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | C79F2 | C79F2RV | marker_locus | 44.2 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | C56E1 | C56E1RIA | marker_locus | 46.7 cM |
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Map QTL
This map contains 100 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg03 | qSL2.5.HM-F2:3_lg03 | QTL | 3.9 cM | 49.1 cM | 18.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | qSI.HM-F2:3_lg04 | QTL | 32 cM | 34.4 cM | 32.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | qLP.HM-F2:3_lg04 | QTL | 34.4 cM | 40.6 cM | 36.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg04 | qFEL.HM-F2:3_lg04 | QTL | 0 cM | 32 cM | 30.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | qWALL.HM-F2:3_lg06 | QTL | 0 cM | 7.1 cM | 6.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | qSL50.HM-F2:3_lg06 | QTL | 44.2 cM | 46.7 cM | 46.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | qPH.HM-F2:3_lg06 | QTL | 40.5 cM | 40.5 cM | 40.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | qMIC.HM-F2:3_lg06 | QTL | 0 cM | 7.1 cM | 6.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | qFS.HM-F2:3_lg06 | QTL | 0 cM | 7.1 cM | 6.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg06 | qFEL.HM-F2:3_lg06 | QTL | 7.1 cM | 40.5 cM | 8.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg07 | qMIC.HM-F2:3_lg07 | QTL | 18.5 cM | 22.5 cM | 18.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg07 | qFLWRT.HM-F2:3_lg07.2 | QTL | 22.5 cM | 39.1 cM | 38.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg07 | qFLWRT.HM-F2:3_lg07.1 | QTL | 0 cM | 18.4 cM | 14.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg07 | qFEL.HM-F2:3_lg07 | QTL | 18.4 cM | 18.5 cM | 18.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg09 | qWTFN.HM-F2:3_lg09 | QTL | 10.9 cM | 28.6 cM | 20.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg09 | qWALL.HM-F2:3_lg09 | QTL | 0 cM | 10.9 cM | 0.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg09 | qMIC.HM-F2:3_lg09 | QTL | 0 cM | 10.9 cM | 0.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg09 | qAREOAH.HM-F2:3_lg09 | QTL | 0 cM | 10.9 cM | 0.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg09 | qAREOA.HM-F2:3_lg09 | QTL | 0 cM | 10.9 cM | 0.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg10 | qWTFN.HM-F2:3_lg10 | QTL | 1.6 cM | 12.2 cM | 2.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg10 | qWALL.HM-F2:3_lg10 | QTL | 52.5 cM | 67.3 cM | 54.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg10 | qRPHND.HM-F2:3_lg10 | QTL | 1.6 cM | 12.2 cM | 8.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg10 | qMIC.HM-F2:3_lg10 | QTL | 1.6 cM | 12.2 cM | 2.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg10 | qLP.HM-F2:3_lg10 | QTL | 52.5 cM | 67.3 cM | 66.5 cM |
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).lg10 | qFS.HM-F2:3_lg10 | QTL | 52.5 cM | 67.3 cM | 66.5 cM |
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