HS-46 x MARCABUCAG8US-1-88, F2.3 (1998)

Map Overview

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NameHS-46 x MARCABUCAG8US-1-88, F2:3 (1998)
SpeciesGossypium hirsutum
Map typeGenetic
Population typeF2.3
Genome groupAD
Map unitcM
Maternal parentHS-46
Paternal parentMARCABUCAG8US 1-88
Population size96
Number of loci120
Number of QTL100
Number of linkage groups31
Publication[view all]
ContactUlloa, Mauricio
Map Loci
This map contains 120 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg01C5E5C5E5RVmarker_locus0 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg01C76E3C76E3RVmarker_locus0.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg02C21E1C21E1RVmarker_locus0 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg02C16C1C16C1RVmarker_locus3 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg03C41F5C41F5RImarker_locus0 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg03C24A4C24A4RImarker_locus3.9 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg03C81A5C81A5RImarker_locus49.1 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04C116C6C116C6RImarker_locus0 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04C121B1C121B1RImarker_locus32 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04C44B4C44B4RVmarker_locus34.4 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04C46F1C46F1RImarker_locus40.6 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04C34E3C34E3RVmarker_locus57.9 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04C108C5C108C5RVmarker_locus88.2 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04C42E4C42E4RImarker_locus100.6 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04C56E1C56E1RIBmarker_locus102.2 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04C112E4C112E4RImarker_locus103.8 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04C111A6C111A6RImarker_locus107.7 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg05C56D6C56D6RVmarker_locus0 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg05F12D4F12D4RVmarker_locus4.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06C54B3C54B3RImarker_locus0 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06C16A1C16A1RImarker_locus7.1 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06C56A6C56A6RIBmarker_locus41.7 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06C79F2C79F2RIBmarker_locus44.2 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06C79F2C79F2RVmarker_locus44.2 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06C56E1C56E1RIAmarker_locus46.7 cM
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Map QTL
This map contains 100 QTL:
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Linkage GroupNameTypeStartStopPeak
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg03qSL2.5.HM-F2:3_lg03QTL3.9 cM49.1 cM18.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04qSI.HM-F2:3_lg04QTL32 cM34.4 cM32.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04qLP.HM-F2:3_lg04QTL34.4 cM40.6 cM36.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg04qFEL.HM-F2:3_lg04QTL0 cM32 cM30.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06qWALL.HM-F2:3_lg06QTL0 cM7.1 cM6.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06qSL50.HM-F2:3_lg06QTL44.2 cM46.7 cM46.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06qPH.HM-F2:3_lg06QTL40.5 cM40.5 cM40.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06qMIC.HM-F2:3_lg06QTL0 cM7.1 cM6.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06qFS.HM-F2:3_lg06QTL0 cM7.1 cM6.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg06qFEL.HM-F2:3_lg06QTL7.1 cM40.5 cM8.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg07qMIC.HM-F2:3_lg07QTL18.5 cM22.5 cM18.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg07qFLWRT.HM-F2:3_lg07.2QTL22.5 cM39.1 cM38.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg07qFLWRT.HM-F2:3_lg07.1QTL0 cM18.4 cM14.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg07qFEL.HM-F2:3_lg07QTL18.4 cM18.5 cM18.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg09qWTFN.HM-F2:3_lg09QTL10.9 cM28.6 cM20.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg09qWALL.HM-F2:3_lg09QTL0 cM10.9 cM0.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg09qMIC.HM-F2:3_lg09QTL0 cM10.9 cM0.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg09qAREOAH.HM-F2:3_lg09QTL0 cM10.9 cM0.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg09qAREOA.HM-F2:3_lg09QTL0 cM10.9 cM0.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg10qWTFN.HM-F2:3_lg10QTL1.6 cM12.2 cM2.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg10qWALL.HM-F2:3_lg10QTL52.5 cM67.3 cM54.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg10qRPHND.HM-F2:3_lg10QTL1.6 cM12.2 cM8.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg10qMIC.HM-F2:3_lg10QTL1.6 cM12.2 cM2.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg10qLP.HM-F2:3_lg10QTL52.5 cM67.3 cM66.5 cM
HS-46 x MARCABUCAG8US-1-88, F2:3 (1998).HSM-F2:3_lg10qFS.HM-F2:3_lg10QTL52.5 cM67.3 cM66.5 cM
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Contact
NameDetails
Ulloa, Mauricio
Description:Breeding, genetics, and Genomics
First name:Mauricio
Last name:Ulloa
Title:Research Geneticist
Institution:USDA-ARS, W.I.C.S., Res. Unit
Address:17053 N. Shafter Ave., Shafter, California 93263
Country:United States
Email:mauricio.ulloa@usda.gov
Phone:661-746-8009
Fax:746-746-1619
Keywords:Breeding and Genomics
Last update:27-Apr-2010
Stock
NameTypeDetails
HS-46 x MARCABUCAG8US-1-88, F2:3population
Alias:3
Description:genetic mapping
Population size:96
Secondary id:cdbpop_000025
Pedigree:HS-46 / MARCABUCAG8US 1-88
Publication
YearPublications
1998Shappley Z, Jenkins J, Meredith W, McCarty JJ. An RFLP linkage map of Upland cotton, Gossypium hirsutum L. Theoretical and applied genetics. 1998 Oct; 97(5/6):756-761.
1998Quantitative trait loci associated with agronomic and fiber traits of upland cotton.
2002Ulloa M, Meredith WJ, Shappley Z, Kahler A. RFLP genetic linkage maps from four F2.3 populations and a joinmap of Gossypium hirsutum L. Theoretical and applied genetics. 2002 Feb; 104(2/3):200-208
2005Ulloa M, Saha S, Jenkins JN, Meredith WR, McCarty JC, Stelly DM. Chromosomal Assignment of RFLP Linkage Groups Harboring Important QTLs on an Intraspecific Cotton (Gossypium hirsutum L.) Joinmap. Journal of heredity. 2005; 96(2):132-144
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