MCU-5 x Siokra 1-4, RIL (2015 SNP)

Map Overview


Name	MCU-5 x Siokra 1-4, RIL (2015 SNP)
Species	Gossypium hirsutum
Genome group	AD
Map type	genetic
Map unit	cM
Number of loci	1244
Number of QTL	4
Number of linkage groups	53
Publication	[view all]
Contact	N/A

Publication


Year	Publications
2014	Zhu QH, Spriggs A, Taylor JM, Llewellyn D, Wilson I. Transcriptome and Complexity-Reduced-DNA Based Identification of Intraspecies Single Nucleotide Polymorphisms in the Polyploid Gossypium hirsutum L. G3 (Bethesda, Md.). 2014 Aug 7.

Map Loci

This map contains 1,244 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_12680287	Chr05_12680286	marker_locus	31.75 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_27723998	Chr05_27723998	marker_locus	33.28 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr02_6578245	Chr02_6578245	marker_locus	37.93 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr02_6026314	Chr02_6026313	marker_locus	38.35 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr03_6480399	Chr03_6480398	marker_locus	46.39 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr03_5885254	Chr03_5885254	marker_locus	51.2 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr03_18925090	Chr03_18925089	marker_locus	57.84 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_15495692	Chr05_15495692	marker_locus	59.13 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_16628541	Chr05_16628541	marker_locus	59.77 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_21474679	Chr05_21474678	marker_locus	60.41 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_21741800	Chr05_21741799	marker_locus	60.83 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_28447075	Chr05_28447074	marker_locus	61.68 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_22768269	Chr05_22768269	marker_locus	62.11 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_20759155	Chr05_20759155	marker_locus	62.33 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_12677141	Chr05_12677141	marker_locus	63.84 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG05	CSIRO_D5chr05_6337545	Chr05_6337544	marker_locus	75.65 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG06	CSIRO_D5chr05_61204764	Chr05_61204763	marker_locus	0 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG06	CSIRO_D5chr05_60080218	Chr05_60080217	marker_locus	7.01 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG06	CSIRO_D5chr05_59708928	Chr05_59708927	marker_locus	9.74 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG06	CSIRO_D5chr05_59514975	Chr05_59514974	marker_locus	10.82 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG06	CSIRO_D5chr05_59334074	Chr05_59334073	marker_locus	11.47 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG06	CSIRO_D5chr05_59117358	Chr05_59117357	marker_locus	13.51 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG06	CSIRO_D5chr05_57612231	Chr05_57612230	marker_locus	20.13 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG06	CSIRO_D5chr05_57101358	Chr05_57101357	marker_locus	21.68 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C02_LG06	CSIRO_D5chr05_56245406	Chr05_56245405	marker_locus	25.11 cM

Page

...

Last

Map QTL

This map contains 4 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
MCU-5 x Siokra 1-4, RIL (2015 SNP).C04_LG15	qPOLLENCL.MS-chr04	QTL	0 cM	19.03 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C06_LG21	qDTL.MS-chr06	QTL	32.33 cM	33.83 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C11_LG43	qDTL.MS-chr11	QTL	0 cM	13.55 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C15_LG04	qLFSP.MS-chr15	QTL	0 cM	8.8 cM	-

Page

View Map

Search form

MCU-5 x Siokra 1-4, RIL (2015 SNP)