g.barbadense_cottongen_reftransV1_0098061, g.barbadense_cottongen_reftransV1_0098061 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy Swiss-Prot
Match: Y1015_ARATH (Uncharacterized protein At1g01500 OS=Arabidopsis thaliana GN=At1g01500 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.775e-64 Identity = 116/190 (61.05%), Postives = 139/190 (73.16%), Query Frame = 2 Query: 377 SVWLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERMEGEWS------------MDCYLAAA---AKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPE 901 S WLE+RLFYVRIAPCVV+NVPD LTL H RRE G SLE+NG RVP+S +A L LR DR++RESSEVTY+ST++VRVTG +FEVY++E V LCG+L+R+EG W+ MDCY+A P S FF+PK GVS+PS+EVYIAGCC G PVILTKTI SP+RK A + LDAIPE Sbjct: 40 SAWLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEVNGVRVPSSQTASLKLRRDRVDRESSEVTYVSTETVRVTGCVDFEVYDNEDMV-LCGNLDRIEGAWNNGTVSDPKTGWGMDCYIAMGNGHVSGPSASVFFQPKFGVSSPSVEVYIAGCCGGVPVILTKTIQASPRRKVARHVT--LDAIPE 226
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Match: A0A0D2TCP5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G103100 PE=4 SV=1) HSP 1 Score: 424.091 bits (1089), Expect = 1.645e-136 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 2 Query: 299 MDHQLHDRSSILAQKTSNSYDLINHSSVWLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERMEGEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPEXXXXXXXXXXXXXXXIRHRKLQV 970 MDHQLHDRSSILAQKTSNSYDLINHSSVWLEIRLFYVRIAPCVVDNVPD LTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFE YEDEKKVLLCGSLERMEGEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPE+EEFGKGNDKGGNGFIRHRKLQV Sbjct: 1 MDHQLHDRSSILAQKTSNSYDLINHSSVWLEIRLFYVRIAPCVVDNVPDHLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEAYEDEKKVLLCGSLERMEGEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPENEEFGKGNDKGGNGFIRHRKLQV 224 HSP 2 Score: 88.9669 bits (219), Expect = 1.155e-15 Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 1 Query: 1819 VQVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAXXXXXXXXXXXXXXXXXXXXXXXMRSYQATT 2028 +QVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAGVRVGVGIGLGVCLGVGVGVGLLMRSYQATT Sbjct: 222 LQVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAGVRVGVGIGLGVCLGVGVGVGLLMRSYQATT 291
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Match: A0A0B0NS85_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_10483 PE=4 SV=1) HSP 1 Score: 419.083 bits (1076), Expect = 1.896e-134 Identity = 218/224 (97.32%), Postives = 221/224 (98.66%), Query Frame = 2 Query: 299 MDHQLHDRSSILAQKTSNSYDLINHSSVWLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERMEGEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPEXXXXXXXXXXXXXXXIRHRKLQV 970 MDHQ+HDRSSILAQKTSNSYDLINHSSVWLEIRLFYVRIAPCVVDNVPD LTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTY+STDSVRVTGGFEFE YEDEKKVLLCGSLERMEGEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAG PVILTKTILGSP+RKGASRLKWMLDAIPEDEEFGKGNDKGGNGFIRHRKLQV Sbjct: 1 MDHQMHDRSSILAQKTSNSYDLINHSSVWLEIRLFYVRIAPCVVDNVPDHLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYISTDSVRVTGGFEFEAYEDEKKVLLCGSLERMEGEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGRPVILTKTILGSPRRKGASRLKWMLDAIPEDEEFGKGNDKGGNGFIRHRKLQV 224 HSP 2 Score: 88.5817 bits (218), Expect = 1.261e-15 Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 1 Query: 1819 VQVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAXXXXXXXXXXXXXXXXXXXXXXXMRSYQATT 2028 +QVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAGVRVGVGIGLGVCLGVGVGVGLLMRSYQATT Sbjct: 222 LQVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAGVRVGVGIGLGVCLGVGVGVGLLMRSYQATT 291
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Match: A0A061DSU5_THECC (Erythronate-4-phosphate dehydrogenase family protein, putative OS=Theobroma cacao GN=TCM_005267 PE=4 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 1.148e-113 Identity = 189/224 (84.38%), Postives = 202/224 (90.18%), Query Frame = 2 Query: 299 MDHQLHDRSSILAQKTSNSYDLINHSSVWLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERMEGEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPEXXXXXXXXXXXXXXXIRHRKLQV 970 MDHQ HD S IL KTSNSY+L+N+SSVWLEIRL YVRIAPCV+D+VPD LTLCHLRREIGVSLEING RVPASDSA LTLR DRLNRESSEVTYL+TDSVR+TGGFEFEVYEDEKKVLLCGSLERMEGEWSMDCY+AAAA EPGNSAFF+PK+GVSAP IEVYIAGCCAG PVILTKTIL SP+RKG SRL LDAIPEDEE GKGN+K GNG IRHRK Q+ Sbjct: 1 MDHQEHDLSPILVPKTSNSYNLMNNSSVWLEIRLIYVRIAPCVIDSVPDHLTLCHLRREIGVSLEINGCRVPASDSASLTLRRDRLNRESSEVTYLNTDSVRITGGFEFEVYEDEKKVLLCGSLERMEGEWSMDCYIAAAAMEPGNSAFFQPKVGVSAPGIEVYIAGCCAGVPVILTKTILVSPRRKGGSRLSGTLDAIPEDEEIGKGNNKDGNGLIRHRKFQI 224 HSP 2 Score: 70.4774 bits (171), Expect = 8.601e-10 Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1 Query: 1822 QVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAXXXXXXXXXXXXXXXXXXXXXXXMRSYQATT 2028 Q+T+A EDYDSDGK+G S+Y+EEMYA EDGQLSWFNAGVRVGVGIGLG+CLG+G+GVGLLMRSYQATT Sbjct: 223 QITEAGAEDYDSDGKLGHSYYSEEMYASEDGQLSWFNAGVRVGVGIGLGMCLGIGIGVGLLMRSYQATT 291
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Match: A0A0D2QYM8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G159900 PE=4 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 3.761e-94 Identity = 170/224 (75.89%), Postives = 186/224 (83.04%), Query Frame = 2 Query: 299 MDHQLHDRSSILAQKTSNSYDLINHSSVWLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERMEGEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPEXXXXXXXXXXXXXXXIRHRKLQV 970 MD Q D I K S+ Y ++N+SSVWLEIRLFYVRIAP V+D+ PD LTLC+LRREIG SLE+NGSRVPASDSA TLR DRL+RESSEVTYLSTDSVRVTGGFEFEVYE+E K++LCGSLERMEGEWSMDCY+AAA KEPGNSAFF+ K GVSAP IEVYIAGC AG PVILTKTI SP RK SRL LDAIPEDEE GKGN+KG NG +RHR LQV Sbjct: 1 MDLQQLDPLQISIPKASDPYSIMNNSSVWLEIRLFYVRIAPRVIDSAPDHLTLCYLRREIGFSLEVNGSRVPASDSASFTLRRDRLDRESSEVTYLSTDSVRVTGGFEFEVYENE-KMMLCGSLERMEGEWSMDCYMAAAVKEPGNSAFFQRKKGVSAPGIEVYIAGCSAGVPVILTKTITVSPWRKNGSRLSSTLDAIPEDEEIGKGNNKGSNGLVRHRNLQV 223 HSP 2 Score: 66.6254 bits (161), Expect = 1.742e-8 Identity = 56/70 (80.00%), Postives = 66/70 (94.29%), Query Frame = 1 Query: 1819 VQVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAXXXXXXXXXXXXXXXXXXXXXXXMRSYQATT 2028 +QVT++ +EDY+ DGKIG +Y+E+MYAGEDGQLSWFNAGVRVGVGIGLG+CLGVG+GVGLLMRSYQATT Sbjct: 221 LQVTESGLEDYEFDGKIGHGYYSEDMYAGEDGQLSWFNAGVRVGVGIGLGMCLGVGIGVGLLMRSYQATT 290
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Match: V4VXR7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021379mg PE=4 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 5.554e-76 Identity = 149/238 (62.61%), Postives = 177/238 (74.37%), Query Frame = 2 Query: 299 MDHQLHDRSSILAQKTSNSYDLINHSSV----WLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERME-----------GEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPEXXXXXXXXXXXXXXXIRHRKLQ 967 MDHQ +++ SNSY LI +SS+ WLEIRLFYVRI+PCV+ +VPD LTLCH RRE+GVSLEINGSRVP+SD+ LTLR DRLN+ESSEVTY+STDSVRVTG +FEV+ +K ++LCGSLERME WSMDCY A + G+SAFF+PK+GVSAP+IEVYIAGCC G PVILTKTI SP+RKG WMLD+IPE +E + N KGGNG +R RKLQ Sbjct: 1 MDHQD-------SRERSNSYHLIPNSSITHSAWLEIRLFYVRISPCVISSVPDHLTLCHERREVGVSLEINGSRVPSSDTTSLTLRRDRLNKESSEVTYVSTDSVRVTGSIDFEVF--DKDMVLCGSLERMESTWNNGSDSRTAGWSMDCYTAIGS---GSSAFFQPKLGVSAPAIEVYIAGCCGGVPVILTKTIQVSPRRKGYRH--WMLDSIPE-DEEVEKNLKGGNGLVRQRKLQ 223
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Match: A0A067HEC9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022334mg PE=4 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.146e-75 Identity = 151/239 (63.18%), Postives = 177/239 (74.06%), Query Frame = 2 Query: 299 MDHQ-LHDRSSILAQKTSNSYDLINHSSV----WLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERME-----------GEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPEXXXXXXXXXXXXXXXIRHRKLQ 967 MDHQ H+RS NSY LI +SS+ WLEIRLFYVRI+PCV+ +VPD LTLCH RREIGVSLEINGSRVP+SD+ LTLR D+LN+ESSEVTY+STDSVRVTG +FEV+ +K ++LCGSLERME WSMDCY A + G+SAFF+PK+GVSAP+IEVYIAGCC G PVILTKTI SP+RKG WMLD+IPE +E + N KGGNG +R RKLQ Sbjct: 1 MDHQDSHERS--------NSYHLIPNSSITHSAWLEIRLFYVRISPCVISSVPDHLTLCHERREIGVSLEINGSRVPSSDTTSLTLRRDQLNKESSEVTYVSTDSVRVTGSIDFEVF--DKDMVLCGSLERMESTWNNGSDSRTAGWSMDCYTAIGS---GSSAFFQPKLGVSAPAIEVYIAGCCGGVPVILTKTIQVSPRRKGYRH--WMLDSIPE-DEEVEKNLKGGNGLVRQRKLQ 223
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Match: M5X1E2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008790mg PE=4 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.917e-75 Identity = 151/248 (60.89%), Postives = 180/248 (72.58%), Query Frame = 2 Query: 299 MDHQLHDRSSILAQKT----SNSYDLINHSSV----WLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERMEG----------------EWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPEXXXXXXXXXXXXXXXIRHRKLQV 970 M+ D S++ KT NS ++N S+ W EIRLFYVR+APCV+D+VPD LTL HLRREIGVSLEING++VPASDSA LTLR DR+++ESSEVTY+STDSVRVTG EFEVYE+ V LCGSLERMEG WSMDCY+AA+ G+SAFF+PK+G+S+PSIEVYIAGCC+G PVILTKTI SP+RKG MLDAIPEDEE GK + K NG +RHRK+Q+ Sbjct: 1 MEQHDKDSSAVAISKTPNSIQNSIQVLNGPSLAHSAWFEIRLFYVRVAPCVIDSVPDHLTLRHLRREIGVSLEINGAKVPASDSASLTLRRDRVDKESSEVTYVSTDSVRVTGPVEFEVYENNDMV-LCGSLERMEGVWLNGNAGGLKNDSKTGWSMDCYMAASINS-GSSAFFRPKLGLSSPSIEVYIAGCCSGVPVILTKTIQISPRRKGTRHA--MLDAIPEDEEVGKEHGKSCNGLVRHRKVQI 244 HSP 2 Score: 63.1586 bits (152), Expect = 3.331e-7 Identity = 51/70 (72.86%), Postives = 65/70 (92.86%), Query Frame = 1 Query: 1819 VQVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAXXXXXXXXXXXXXXXXXXXXXXXMRSYQATT 2028 VQ+T+ E+++Y+S+GKIG Y+++MY GEDGQL+WFNAGVRVGVGIGLG+CLG+G+GVGLLMRSYQATT Sbjct: 242 VQITEPEIDEYESEGKIGHHFYSDDMYTGEDGQLTWFNAGVRVGVGIGLGMCLGIGIGVGLLMRSYQATT 311
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Match: V4U2F0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021379mg PE=4 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 3.009e-75 Identity = 149/239 (62.34%), Postives = 178/239 (74.48%), Query Frame = 2 Query: 299 MDHQLHDRSSILAQKTSNSYDLINHSSV----WLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERME-----------GEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPEXXXXXXXXXXXXXXXIRHRKLQV 970 MDHQ +++ SNSY LI +SS+ WLEIRLFYVRI+PCV+ +VPD LTLCH RRE+GVSLEINGSRVP+SD+ LTLR DRLN+ESSEVTY+STDSVRVTG +FEV+ +K ++LCGSLERME WSMDCY A + G+SAFF+PK+GVSAP+IEVYIAGCC G PVILTKTI SP+RKG WMLD+IPE +E + N KGGNG +R RKLQ+ Sbjct: 1 MDHQD-------SRERSNSYHLIPNSSITHSAWLEIRLFYVRISPCVISSVPDHLTLCHERREVGVSLEINGSRVPSSDTTSLTLRRDRLNKESSEVTYVSTDSVRVTGSIDFEVF--DKDMVLCGSLERMESTWNNGSDSRTAGWSMDCYTAIGS---GSSAFFQPKLGVSAPAIEVYIAGCCGGVPVILTKTIQVSPRRKGYR--HWMLDSIPE-DEEVEKNLKGGNGLVRQRKLQI 224 HSP 2 Score: 61.6178 bits (148), Expect = 7.672e-7 Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 1 Query: 1819 VQVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAXXXXXXXXXXXXXXXXXXXXXXXMRSYQATT 2028 +Q+T+AE DY+ DGKIG Y+E+MY GEDGQLSWFNAGVRVGVGIGLG+CLGVG+GVGLLMRSYQA T Sbjct: 222 LQITEAEFNDYELDGKIGEKIYSEDMYYGEDGQLSWFNAGVRVGVGIGLGMCLGVGIGVGLLMRSYQAAT 291
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Match: A0A067H5X0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022334mg PE=4 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 6.259e-75 Identity = 151/240 (62.92%), Postives = 178/240 (74.17%), Query Frame = 2 Query: 299 MDHQ-LHDRSSILAQKTSNSYDLINHSSV----WLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERME-----------GEWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPEXXXXXXXXXXXXXXXIRHRKLQV 970 MDHQ H+RS NSY LI +SS+ WLEIRLFYVRI+PCV+ +VPD LTLCH RREIGVSLEINGSRVP+SD+ LTLR D+LN+ESSEVTY+STDSVRVTG +FEV+ +K ++LCGSLERME WSMDCY A + G+SAFF+PK+GVSAP+IEVYIAGCC G PVILTKTI SP+RKG WMLD+IPE +E + N KGGNG +R RKLQ+ Sbjct: 1 MDHQDSHERS--------NSYHLIPNSSITHSAWLEIRLFYVRISPCVISSVPDHLTLCHERREIGVSLEINGSRVPSSDTTSLTLRRDQLNKESSEVTYVSTDSVRVTGSIDFEVF--DKDMVLCGSLERMESTWNNGSDSRTAGWSMDCYTAIGS---GSSAFFQPKLGVSAPAIEVYIAGCCGGVPVILTKTIQVSPRRKGYRH--WMLDSIPE-DEEVEKNLKGGNGLVRQRKLQI 224 HSP 2 Score: 61.6178 bits (148), Expect = 8.331e-7 Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 1 Query: 1819 VQVTDAEVEDYDSDGKIGLSHYAEEMYAGEDGQLSWFNAXXXXXXXXXXXXXXXXXXXXXXXMRSYQATT 2028 +Q+T+AE DY+ DGKIG Y+E+MY GEDGQLSWFNAGVRVGVGIGLG+CLGVG+GVGLLMRSYQA T Sbjct: 222 LQITEAEFNDYELDGKIGEKIYSEDMYYGEDGQLSWFNAGVRVGVGIGLGMCLGVGIGVGLLMRSYQAAT 291
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Match: A0A067JX71_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14337 PE=4 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 5.678e-71 Identity = 142/227 (62.56%), Postives = 169/227 (74.45%), Query Frame = 2 Query: 338 QKTSNSYDLINHSSVWLEIRLFYVRIAPCVVDNVPDLLTLCHLRREIGVSLEINGSRVPASDSAVLTLRCDRLNRESSEVTYLSTDSVRVTGGFEFEVYEDEKKVLLCGSLERMEG---------------EWSMDCYLAAAAKEPGNSAFFKPKMGVSAPSIEVYIAGCCAGTPVILTKTILGSPKRKGASRLKWMLDAIPEXXXXXXXX-XXXXXXXIRHRKLQV 970 ++ SNSY LI +SS WLEIRLFYVRI PC +++VPD LTL HLRREI LEINGSR+PA+DSA +TLR DRLN+ESSEVTY+STDSVRVT EFEV E + + LCGSLER+E WS++CY+AA+ E GNSAFFKPKMG+SAP+IEVYIAGCC G P+ILTKTIL SP+RKG+ MLDAIPEDEE K + GNG +R RK+Q+ Sbjct: 5 EQESNSYHLITNSS-WLEIRLFYVRITPCAIESVPDHLTLRHLRREISTPLEINGSRIPAADSASVTLRRDRLNKESSEVTYVSTDSVRVTSAVEFEVLESD-DLFLCGSLERIESVWGNGSVGLENDSKTGWSIECYMAASVGE-GNSAFFKPKMGISAPAIEVYIAGCCGGVPMILTKTILVSPRRKGSRH--GMLDAIPEDEEMEKEHFGAEGNGSVRLRKIQI 226 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 1
BLAST of g.barbadense_cottongen_reftransV1_0098061 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098061 ID=g.barbadense_cottongen_reftransV1_0098061; Name=g.barbadense_cottongen_reftransV1_0098061; organism=Gossypium barbadense; type=contig; length=2999bpback to top |