g.barbadense_cottongen_reftransV1_0098040, g.barbadense_cottongen_reftransV1_0098040 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0098040
Unique Nameg.barbadense_cottongen_reftransV1_0098040
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2758
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Dt06chromosomeg.barbadense_cottongen_reftransV1_0098040:1..2758 .
Dt06:30849309..30856275 -
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: RH39_ORYSJ (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica GN=Os01g0184500 PE=2 SV=1)

HSP 1 Score: 461.455 bits (1186), Expect = 6.234e-149
Identity = 213/249 (85.54%), Postives = 232/249 (93.17%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGG R+R QEDSLN P+DMVVGTPGR+L HI DGNMVYGDIKYLVLDEADTMFD+GFGPDIRKFL PLKNRA KP  QGFQT+LVTATMTKAVQKLIDEEF+GI HLRT+T  K++A+ARHDFIKL GSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP E+RVENLNKF++++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+
Sbjct:  203 VFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSI 451          

HSP 2 Score: 174.096 bits (440), Expect = 3.384e-44
Identity = 93/162 (57.41%), Postives = 115/162 (70.99%), Query Frame = 2
Query:  323 KHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            +H +LLERLR RHLK    +P+++P    +     G    A +  + ++ + +  DSFEELGL EEVM A+ EMGI  PTEIQC+G+P VL   SVVLGSHTGSGKTLAY+LPLVQLLRRDEA+LGM  KPRRPRAVVLCPTREL+EQV     ++   + F
Sbjct:   60 RHELLLERLRQRHLKG---VPAATPRPAQREKGRGGGGGGAQELQQKRRVEVV--DSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARF 216          

HSP 3 Score: 102.064 bits (253), Expect = 5.851e-21
Identity = 73/171 (42.69%), Postives = 95/171 (55.56%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSG--KEPTIAKSV---------KSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSE-----GKKLKVVGFRGQASS 2317
            IDYLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEA++KNESLE+LT +NVRR     + T  KG+   L K  N K + + V+   ++S   K+ T ++           KST+  K             +      + + R  G   +     G KL VVGFRG++S 
Sbjct:  451 IDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEAMKKNESLEALTTNNVRRAAVNPQYTSTKGRPSAL-KVVNQKGR-RGVALQTKSSRIVKDTTSSRRRSPIRSQPRSKSTSSGKAKPVRSAKPSKSSSPSPKVAKSRPRPEGRKGDALNKLGSKLSVVGFRGRSSG 619          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: RH39_ARATH (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana GN=RH39 PE=2 SV=2)

HSP 1 Score: 453.366 bits (1165), Expect = 6.444e-146
Identity = 211/249 (84.74%), Postives = 230/249 (92.37%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            V+ VAKSISHHARFRS +VSGG R+R QEDSLNN IDMVVGTPGR+LQHI++GNMVYGDI YLVLDEADTMFDRGFGP+IRKFL PL  RALK + QGFQT+LVTATMT AVQKL+DEEFQGIEHLRTSTLHKKIA+ARHDFIKL G E+KLEALLQVLEPSLAKG++VMVFCNTLNSSRAVDH+L ENQISTVNYHGEVP EQRVENL KFK ++GDCPTLVCTDLAARGLDLDV+HVVMFDFP NS+
Sbjct:  205 VYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSI 453          

HSP 2 Score: 185.267 bits (469), Expect = 6.368e-48
Identity = 127/216 (58.80%), Postives = 148/216 (68.52%), Query Frame = 2
Query:  161 MAATSRTLLFVSLLSSPKHFS----YYPFL---KPSRVFRGFKPFCSA------PSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769
            M   SRT+L +SL SS   FS     +PFL   KP R    F+P  SA      P+      DPD LKH++LLERLR RHLK SAK P   PS       V+G E E+      +KK K + ++F+ELGLSEEVMGA++E+ IEVPTEIQCIGIP V+E KSVVLGSHTGSGKTLAY+LP+VQL+R DEA LG  TKPRRPR VVLCPTRELSEQV
Sbjct:    1 MVGASRTILSLSLSSSLFTFSKIPHVFPFLRLHKP-RFHHAFRPLYSAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKPPQQRPS------SVVGVEEES----SIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQV 205          

HSP 3 Score: 135.961 bits (341), Expect = 8.230e-32
Identity = 80/167 (47.90%), Postives = 108/167 (64.67%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVK----LFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXS------LETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSK 2323
            IDYLHRTGRTARMGAKGKVTSLV++KD +LA RIEEA+R NESLESLT DNVRRD ART IT++KG++VK    + K  N ++K  + S   R++G +  + KS  S+              S      L+T  + ++  + ++      GKKL VVGFRG++SS++
Sbjct:  453 IDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQRNSRDKPSSSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGSRSIAARGKTGSDRRPGKKLSVVGFRGKSSSAR 619          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_GIBZE (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.121e-26
Identity = 71/252 (28.17%), Postives = 129/252 (51.19%), Query Frame = 3
Query:  996 KSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            K     +R R+T V GG     Q   L+  +++ + TPGR++  ++ G      + YLVLDEAD M D GF P IRK +G      ++P     QT++ +AT  K V+ L  +  Q    +   ++           ++++    K + +++ +E  +  K N++++F  T   +  +  FL ++    ++ HG+    +R   L++FK+  G  P +V TD+A+RG+D+ ++ HV+ +D+P NS   I  I
Sbjct:  228 KKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG-----QIRPDR---QTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 469          

HSP 2 Score: 31.5722 bits (70), Expect = 1.121e-26
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918
            DY+HR GRT R GA G   +L
Sbjct:  464 DYIHRIGRTGRAGAMGTAITL 484          

HSP 3 Score: 57.3806 bits (137), Expect = 4.584e-7
Identity = 36/94 (38.30%), Postives = 48/94 (51.06%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769
            ++F+E G    VM  V+  G   PT IQ  G P  L  + VV  + TGSGKTL Y LP +  +        +L     P  +VL PTREL+ Q+
Sbjct:  134 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQP----LLAPGDGPIVLVLAPTRELAVQI 223          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_SCLS1 (ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.248e-26
Identity = 74/246 (30.08%), Postives = 123/246 (50.00%), Query Frame = 3
Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            +R R+T V GG     Q   L   +++ + TPGR++  I+ G      + YLVLDEAD M D GF P IRK LG      ++P     QT + +AT  K V+ L  +       +   +L           ++++    K + + + LE  +  K N++++F  T   +  +  FL ++    ++ HG+    +R   LN+FK+  G  P +V TD+A+RG+D+ ++ HV  +D+P NS   I  I
Sbjct:  249 SRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILG-----QIRPDR---QTCMWSATWPKEVRALASDYLNDFIQVNIGSLELSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRI 484          

HSP 2 Score: 32.3426 bits (72), Expect = 1.248e-26
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918
            DY+HR GRT R G KG   +L
Sbjct:  479 DYIHRIGRTGRAGQKGTAITL 499          

HSP 3 Score: 56.9954 bits (136), Expect = 6.540e-7
Identity = 38/99 (38.38%), Postives = 50/99 (50.51%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769
            ++F+E G    VM  V+  G   PT IQ  G P  L  + VV  + TGSGKTL Y LP         AI+ +  +P       P  +VL PTREL+ Q+
Sbjct:  149 ETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 238          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_BOTFB (ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp2 PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.281e-26
Identity = 77/249 (30.92%), Postives = 126/249 (50.60%), Query Frame = 3
Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARH---DFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            +R R+T V GG     Q   L   +++ + TPGR++  I+ G      + YLVLDEAD M D GF P IRK LG      ++P     QT + +AT  K V+ L  +       +   +L     SA H     ++++    K + + + LE  +  K N++++F  T   +  +  FL ++    ++ HG+    +R   LN+FK+  G  P +V TD+A+RG+D+ ++ HV  +D+P NS   I  I
Sbjct:  202 SRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILG-----QIRPDR---QTCMWSATWPKEVRALASDYLNEFIQVNIGSLE---LSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRI 437          

HSP 2 Score: 32.3426 bits (72), Expect = 1.281e-26
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918
            DY+HR GRT R G KG   +L
Sbjct:  432 DYIHRIGRTGRAGQKGTAITL 452          

HSP 3 Score: 56.9954 bits (136), Expect = 6.497e-7
Identity = 38/99 (38.38%), Postives = 50/99 (50.51%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769
            ++F+E G    VM  V+  G   PT IQ  G P  L  + VV  + TGSGKTL Y LP         AI+ +  +P       P  +VL PTREL+ Q+
Sbjct:  102 ETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 191          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.560e-26
Identity = 71/246 (28.86%), Postives = 127/246 (51.63%), Query Frame = 3
Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            +R R+T V GG     Q   L+  +++ + TPGR++  ++ G      + YLVLDEAD M D GF P IRK +       ++P     QT + +AT  K V++L  +       +   ++           ++++    K + +++ LE  +  +GN+ ++F  T   +  +  FL ++    ++ HG+   ++R   LN+FK+  G  P +V TD+A+RG+D+ D+ HV+ +D+P NS   I  I
Sbjct:  219 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIS-----QIRPD---RQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT--GKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRI 454          

HSP 2 Score: 33.113 bits (74), Expect = 1.560e-26
Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSLVAKKD 1933
            DY+HR GRT R GAKG   +    ++
Sbjct:  449 DYIHRIGRTGRAGAKGTAITFFTTEN 474          

HSP 3 Score: 59.3066 bits (142), Expect = 1.321e-7
Identity = 37/99 (37.37%), Postives = 52/99 (52.53%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769
            ++F+E G  + V+  V+  G E PT IQ  G P  L  + VV  + TGSGKTL Y LP         AI+ +  +P       P  ++L PTREL+ Q+
Sbjct:  119 ENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLILAPTRELAVQI 208          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DDX3_DROME (ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.913e-26
Identity = 82/254 (32.28%), Postives = 127/254 (50.00%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHL---RTSTLHKKIASARHDFIKLLGSENKLEALLQVLE-----PSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLD-VNHVVMFDFP 1715
            +F  AK  ++ +R R  ++ GG     Q   L+    ++V TPGR+   I  G +   +I++LVLDEAD M D GF P IR+ +  L    + P+GQ  QT++ +AT  K +Q+L  +       L   R  +  + I       I  +   +K   LL +L      P   K +  ++F  T   + +++ FL +      + HG+   ++R E L  F+S  GDCP LV T +AARGLD+  V HV+ FD P
Sbjct:  394 IFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLN---MPPTGQ-RQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQT----ILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRS--GDCPILVATAVAARGLDIPHVKHVINFDLP 637          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_ASPCL (ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dbp2 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.642e-26
Identity = 73/249 (29.32%), Postives = 130/249 (52.21%), Query Frame = 3
Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARH---DFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            +R R+T V GG     Q   L+  +++ + TPGR++  ++ G      + YLVLDEAD M D GF P IRK +       ++P     QT + +AT  K V++L  +       +   ++     SA H     ++++    K + +++ LE  +  + N++++F  T   +  +  FL ++    ++ HG+   ++R   LN+FK+  G  P +V TD+A+RG+D+ D+ HV+ +D+P NS   I  I
Sbjct:  225 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIS-----QIRPD---RQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMD---LSANHRITQIVEVVSDFEKRDKMIKHLEKIMEDRSNKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKA--GKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRI 460          

HSP 2 Score: 33.113 bits (74), Expect = 2.642e-26
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918
            DY+HR GRT R GAKG   + 
Sbjct:  455 DYIHRIGRTGRAGAKGTAITF 475          

HSP 3 Score: 59.6918 bits (143), Expect = 7.854e-8
Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769
            ++F+E G  + V+  V+  G E PT IQ  G P  L  + VV  + TGSGKTL Y LP         AI+ +  +P       P  +VL PTREL+ Q+
Sbjct:  125 ETFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 214          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DRS1_CANAL (ATP-dependent RNA helicase DRS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DRS1 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.105e-26
Identity = 84/269 (31.23%), Postives = 133/269 (49.44%), Query Frame = 3
Query:  918 YSPTLLTSFLFVTRLMLVAF*VFSVAKSISHHAR-FRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDG-NMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFP 1715
            Y P+  T  + +T    +A  V+   K +SHH       +  GG  LR QE+ L    D+V+ TPGR++ HI +  +    DI+ LV+DEAD M + GF  ++ + L      +L P  +  QT+L +ATM   +Q LI    Q    +         +     F+++   +    ALL  L   ++  +RV+VF     ++  +   LG   +     HG +  EQR++N+  FKS   + P L+CTDLAARGLD+  +  V+ +D P
Sbjct:  194 YKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEIL------SLIPKHKR-QTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIRKRDQLKPALLYQLLKGVS--SRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKS--LEVPVLICTDLAARGLDIPKIELVINYDMP 451          

HSP 2 Score: 63.5438 bits (153), Expect = 6.287e-9
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 2
Query:  491 SFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPR-RPRAVVLCPTRELSEQV 769
            SF+ L LS  V+  + E+    PT IQ   IP  L  K +V G+ TGSGKT AYM+P+++ L         L KP    + ++L PTREL+ QV
Sbjct:  131 SFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERL---------LYKPSTSTKVIILTPTRELALQV 215          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_MAGO7 (ATP-dependent RNA helicase DBP2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.730e-26
Identity = 69/248 (27.82%), Postives = 127/248 (51.21%), Query Frame = 3
Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSL---AKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            +R R+T V GG     Q   L+  +++ + TPGR++  ++ G      + YLVLDEAD M D GF P IRK +G      ++P     QT++ +AT  K V+ +  +  Q    +   +L           ++++    K + +++ +E  +      N++++F  T   +  +  FL ++    ++ HG+    +R   L++FK+  G  P +V TD+A+RG+D+ ++ HV+ +D+P NS   I  I
Sbjct:  225 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG-----QIRPD---RQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 462          

HSP 2 Score: 33.113 bits (74), Expect = 5.730e-26
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918
            DY+HR GRT R GAKG   + 
Sbjct:  457 DYIHRIGRTGRAGAKGTAITF 477          

HSP 3 Score: 57.7658 bits (138), Expect = 3.479e-7
Identity = 37/99 (37.37%), Postives = 50/99 (50.51%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769
            ++F+E G    VM  V+  G   PT IQ  G P  L  + VV  + TGSGKTL Y LP         AI+ +  +P       P  ++L PTREL+ Q+
Sbjct:  125 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLILAPTRELAVQI 214          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A0B0PKP3_GOSAR (DEAD-box ATP-dependent RNA helicase 39-like protein OS=Gossypium arboreum GN=F383_09943 PE=4 SV=1)

HSP 1 Score: 513.457 bits (1321), Expect = 4.528e-167
Identity = 243/249 (97.59%), Postives = 245/249 (98.39%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGRLR QEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHV+MFDFPLNS+
Sbjct:  209 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVIMFDFPLNSI 457          

HSP 2 Score: 362.459 bits (929), Expect = 2.105e-109
Identity = 202/222 (90.99%), Postives = 208/222 (93.69%), Query Frame = 2
Query:  143 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            MMQKAMMAATSRTLL VSLLSSPKHFSYYPFLKPSRVFRGFK FC+APSPI TT+DPDDLKHSMLLERLRTRHL+HS KLPSSSPS PPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV     ++   + F
Sbjct:    1 MMQKAMMAATSRTLLSVSLLSSPKHFSYYPFLKPSRVFRGFKAFCNAPSPIPTTVDPDDLKHSMLLERLRTRHLRHSTKLPSSSPSKPPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 222          

HSP 3 Score: 273.092 bits (697), Expect = 2.262e-76
Identity = 157/164 (95.73%), Postives = 160/164 (97.56%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344
            IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFK SN KNKTKAVSASV TSGK+PTIAKSVKSTAPAKPSKKIVKVSKSL+TAKTSAV KKNRS+GGSSEGKKLKVVGFRGQASSSKRESFTPS
Sbjct:  457 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKASNQKNKTKAVSASVLTSGKKPTIAKSVKSTAPAKPSKKIVKVSKSLKTAKTSAVGKKNRSIGGSSEGKKLKVVGFRGQASSSKRESFTPS 620          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A0D2UBN8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G134100 PE=4 SV=1)

HSP 1 Score: 509.22 bits (1310), Expect = 1.763e-165
Identity = 241/249 (96.79%), Postives = 244/249 (97.99%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGRLR QEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKP+GQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASA HDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHV+MFDFPLNS+
Sbjct:  209 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPNGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASAHHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVIMFDFPLNSI 457          

HSP 2 Score: 386.726 bits (992), Expect = 1.560e-118
Identity = 208/222 (93.69%), Postives = 212/222 (95.50%), Query Frame = 2
Query:  143 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIP VLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEA+LGMLTKPRRPRAVVLCPTRELSEQV     ++   + F
Sbjct:    1 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPSVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAMLGMLTKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 222          

HSP 3 Score: 276.944 bits (707), Expect = 8.332e-78
Identity = 160/164 (97.56%), Postives = 162/164 (98.78%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344
            IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIE AIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSN KNKTKAVSASVRTSGKEPTIAKSVKSTAPAKPSKKIVKVSKSL+TAKTSAV+KKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS
Sbjct:  457 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEAAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNQKNKTKAVSASVRTSGKEPTIAKSVKSTAPAKPSKKIVKVSKSLKTAKTSAVQKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 620          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A0D2V9X0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G134100 PE=4 SV=1)

HSP 1 Score: 508.834 bits (1309), Expect = 1.823e-165
Identity = 241/249 (96.79%), Postives = 244/249 (97.99%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGRLR QEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKP+GQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASA HDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHV+MFDFPLNS+
Sbjct:  209 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPNGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASAHHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVIMFDFPLNSI 457          

HSP 2 Score: 385.956 bits (990), Expect = 2.122e-118
Identity = 208/222 (93.69%), Postives = 212/222 (95.50%), Query Frame = 2
Query:  143 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIP VLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEA+LGMLTKPRRPRAVVLCPTRELSEQV     ++   + F
Sbjct:    1 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPSVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAMLGMLTKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 222          

HSP 3 Score: 239.965 bits (611), Expect = 7.238e-65
Identity = 145/164 (88.41%), Postives = 147/164 (89.63%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344
            IDYLHRTGRTARMGAK               ERIE AIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSN KNKTKAVSASVRTSGKEPTIAKSVKSTAPAKPSKKIVKVSKSL+TAKTSAV+KKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS
Sbjct:  457 IDYLHRTGRTARMGAK---------------ERIEAAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNQKNKTKAVSASVRTSGKEPTIAKSVKSTAPAKPSKKIVKVSKSLKTAKTSAVQKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 605          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A061FHR1_THECC (DEAD-box ATP-dependent RNA helicase 39 isoform 1 OS=Theobroma cacao GN=TCM_035812 PE=4 SV=1)

HSP 1 Score: 499.204 bits (1284), Expect = 1.399e-161
Identity = 236/249 (94.78%), Postives = 242/249 (97.19%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGRLR QEDSLN PIDMVVGTPGRVLQHI+DGNMVYGDIKYLVLDEADTMFD GFGPDIRKFLGPLKN ALKP+GQGFQTILVTATMTKAV+KLIDEEFQGIEHLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+
Sbjct:  208 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNKPIDMVVGTPGRVLQHIEDGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFLGPLKNHALKPNGQGFQTILVTATMTKAVEKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 456          

HSP 2 Score: 283.878 bits (725), Expect = 3.179e-80
Identity = 158/225 (70.22%), Postives = 178/225 (79.11%), Query Frame = 2
Query:  143 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLK---PSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            MMQKAMM  TSRTLL +SLLSS KHF +YPFLK   PSRV  GFKP C+A +P  T I+PD L+HSMLLERLRTRHLK S + PS  PS P + +    +E +A DKGK +KK   M +SFEELGLSEEVMGAVREMGIEVPTEIQCIG+P VL+ +SVVLGSHTGSGKTLAYMLPLVQLLR DEA+LGMLTKPRRPRAVVLCPTRELSEQV     ++   + F
Sbjct:    1 MMQKAMMGGTSRTLLSISLLSSTKHFCHYPFLKLPKPSRVLPGFKPLCTATAPTPTIIEPDQLRHSMLLERLRTRHLKDSTRTPS--PSKPQEKVTAFDKEGDASDKGKKRKKG--MVESFEELGLSEEVMGAVREMGIEVPTEIQCIGVPSVLQGRSVVLGSHTGSGKTLAYMLPLVQLLRLDEALLGMLTKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 221          

HSP 3 Score: 209.149 bits (531), Expect = 2.928e-54
Identity = 124/164 (75.61%), Postives = 140/164 (85.37%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344
            IDYLHRTGRTARMGAKGKVTSLVAKK++LLAERIEEAIRKNESLESLT  NVRRD AR +ITEQKGKN KL K SN KNKTKAVSA +  SGK+P+IAKSVKS   A+PSKKI+KVSK++++AK S+V KKNRS G +S  KKL VVGFRG+ASSSK +SF  S
Sbjct:  456 IDYLHRTGRTARMGAKGKVTSLVAKKNVLLAERIEEAIRKNESLESLTAVNVRRDIARAQITEQKGKNAKLIKVSNQKNKTKAVSAHI--SGKKPSIAKSVKSPTAARPSKKIIKVSKNMKSAKASSVGKKNRSSGVNSTAKKLSVVGFRGRASSSKTDSFRRS 617          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A067K314_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22268 PE=4 SV=1)

HSP 1 Score: 494.967 bits (1273), Expect = 7.935e-160
Identity = 233/249 (93.57%), Postives = 239/249 (95.98%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGG RLR QEDSLNNPIDM+VGTPGR+LQHI+DGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRA KP GQGFQTILVTATMTKAVQKLIDEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQ+STVNYHGEVP EQRVENL KFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNSV
Sbjct:  216 VFRVAKSISHHARFRSTMVSGGSRLRPQEDSLNNPIDMIVGTPGRLLQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRASKPDGQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLAENQMSTVNYHGEVPAEQRVENLQKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSV 464          

HSP 2 Score: 205.682 bits (522), Expect = 5.222e-53
Identity = 139/234 (59.40%), Postives = 161/234 (68.80%), Query Frame = 2
Query:  161 MAATSRTLLFVSLLSSPKHFSYYPFLK---PSRVFR--GFKPFCSAPSPILTTI-------------DPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            MA TSRTLL +SL S+ KH  Y+PFLK   PSRV     FKP C+A S   +                PD+ KHS+LLERLR RHLK S K P +    PP+    + +E + ++K K  KK   M  SFEELGLSEEVMGAVREM IEVPTEIQCIG+P +LE KSVVLGSHTGSGKTLAYMLPLVQLLR+DEA+LG+L KPRRPRAVVLCPTRELSEQV     ++   + F
Sbjct:    1 MAGTSRTLLSLSLSSATKH--YHPFLKFPKPSRVLLDFSFKPLCTATSTTASATATATATATTTTISGPDEEKHSILLERLRLRHLKDSRKHPQAKTQSPPKPSVAIEKEEDGFNKSKKGKK---MVGSFEELGLSEEVMGAVREMEIEVPTEIQCIGVPAILEGKSVVLGSHTGSGKTLAYMLPLVQLLRQDEALLGILMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 229          

HSP 3 Score: 147.517 bits (371), Expect = 1.235e-33
Identity = 94/168 (55.95%), Postives = 112/168 (66.67%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKK----NRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344
            ++YLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEAI+KNESLESLTVDNVRRD AR +IT QKGK+ KL K S  KNK KA  ASV++S      + SV  +  A  + K VK      + KTS V  K     +S G  S   KL VV  RG++S+S ++S   S
Sbjct:  464 VNYLHRTGRTARMGAKGKVTSLVAKKDVQLATRIEEAIKKNESLESLTVDNVRRDIARAQITAQKGKSAKLMKQSTQKNKIKA--ASVKSSTDHTKASSSVNKSVKAVKAAKTVKF-----SKKTSQVLNKRTGSKKSSGVKSTASKLSVVPLRGRSSASNKKSLRSS 624          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: U5GD25_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22020g PE=4 SV=1)

HSP 1 Score: 493.812 bits (1270), Expect = 4.442e-159
Identity = 232/249 (93.17%), Postives = 236/249 (94.78%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSI HHARFRSTMVSGGGR+R QEDSLNNPIDMVVGTPGRVLQHI DGNMVYGDIKYLVLDEADTMFDRGFGPDI KFLGPLKNR  K  GQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRA DHFL ENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+
Sbjct:  213 VFRVAKSIGHHARFRSTMVSGGGRMRPQEDSLNNPIDMVVGTPGRVLQHIQDGNMVYGDIKYLVLDEADTMFDRGFGPDIHKFLGPLKNRTSKSDGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAADHFLAENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 461          

HSP 2 Score: 196.052 bits (497), Expect = 1.463e-49
Identity = 123/192 (64.06%), Postives = 141/192 (73.44%), Query Frame = 2
Query:  224 YYPFLK----PSRVFRGF--KPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVL---GQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVL 772
            Y+ FLK    P+RV  GF  +P C+  S    T + D++KHS+LLERLR RHLK S K   +         PV+   G+E E  D  K  KK K +A SFEELGLSEEVMGAV+EMGIEVPTEIQCIGIP +L+ ++VVLGSHTGSGKTLAYMLPLVQLLRRDEA+LG L KPRRPRAVVLCPTRELSEQV 
Sbjct:   26 YHTFLKLPKKPTRVLLGFNFRPLCTLSSTTAAT-ERDEVKHSILLERLRLRHLKGSKKPQLTDTQTQTALKPVVLIEGEEEE--DGFKKSKKGKKIAGSFEELGLSEEVMGAVKEMGIEVPTEIQCIGIPAILDSRTVVLGSHTGSGKTLAYMLPLVQLLRRDEALLGRLMKPRRPRAVVLCPTRELSEQVF 214          

HSP 3 Score: 150.599 bits (379), Expect = 1.790e-34
Identity = 98/190 (51.58%), Postives = 120/190 (63.16%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKA-----------VSASVRTSGKEPTIAKSVKSTXXXXXXXXX----------XXXXXSLETAK----TSAVRKKNRSVGGSSEGKKLKVVGFRGQASSS-KRESFTPS 2344
            IDYLHRTGRTARMGAKGKVTSLVA+KD  LA RIEEA+RKNESLESLTVDNVRRD AR RITEQ+GK+ KL K SN K+  K+            ++SV  SGK  T A++  ST+    +              K  K+++ AK    +SA   +  S G   +  KL+VV FRG++SSS K+ES  PS
Sbjct:  461 IDYLHRTGRTARMGAKGKVTSLVARKDQQLAARIEEAMRKNESLESLTVDNVRRDIARARITEQQGKSAKLIKASNQKSNNKSATDKPPSARTKATSSVMKSGKPSTSARTKASTSVRTKATSSVKKYGKASTPAKSVKAVKVAKRVKSSSASYSRKTSPGVKKQVGKLRVVAFRGRSSSSNKKESLRPS 650          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: B9SM71_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_0296470 PE=4 SV=1)

HSP 1 Score: 491.115 bits (1263), Expect = 1.110e-158
Identity = 232/249 (93.17%), Postives = 239/249 (95.98%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGR+R QEDSLN+PIDM+VGTPGR+LQHI+DGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRA KP G GFQTILVTATMTKAVQKLIDEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP EQRVENL KFKSDDGDCPTLVCTDLAARGLDLDV+HVVMFDFPLNS+
Sbjct:  214 VFRVAKSISHHARFRSTMVSGGGRMRPQEDSLNSPIDMIVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRASKPDGLGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLAENQISTVNYHGEVPAEQRVENLQKFKSDDGDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSI 462          

HSP 2 Score: 204.527 bits (519), Expect = 8.604e-53
Identity = 130/212 (61.32%), Postives = 145/212 (68.40%), Query Frame = 2
Query:  212 KHFSYYPFL---KPSRVFRGF--KPFCSAPSPILTTI--------DPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            KH  YYPFL   KPSRV  GF  KP C+  +    T         DPD  KHS+LLERLR RHLK+S+K          Q   V+  ETE  D     KK K +A SFEEL LS+EVMGAVREM IEVPTEIQCIGIP VL+ KSVVLGSHTGSGKTLAYMLPLVQLLRRDEA+LG+L KPRRPRA+VLCPTRELSEQV     ++   + F
Sbjct:   18 KH--YYPFLRFPKPSRVLLGFNFKPLCTTTASATVTETSTTTTFSDPDQAKHSILLERLRLRHLKNSSKTQQLKTQTQTQTKLVVNVETEKDDSFNKSKKGKKIAGSFEELSLSDEVMGAVREMEIEVPTEIQCIGIPAVLDGKSVVLGSHTGSGKTLAYMLPLVQLLRRDEALLGLLMKPRRPRAIVLCPTRELSEQVFRVAKSISHHARF 227          

HSP 3 Score: 68.1662 bits (165), Expect = 2.159e-8
Identity = 48/115 (41.74%), Postives = 54/115 (46.96%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAV-----------SASVRTSGKEPTIAKSVKST 2164
            IDYLHRTGRTARMGAK                                 DNVRRD AR +ITEQKGK  KL K S+ KNK   +           ++SV  S K  T AKSVK+ 
Sbjct:  462 IDYLHRTGRTARMGAK---------------------------------DNVRRDIARAQITEQKGKKAKLIKLSSQKNKINTIADKSSTNSTKAASSVNKSRKASTPAKSVKAV 543          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: B9H7X6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22020g PE=4 SV=2)

HSP 1 Score: 488.804 bits (1257), Expect = 3.644e-158
Identity = 232/249 (93.17%), Postives = 236/249 (94.78%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSI HHARFRSTMVSGGGR+R QEDSLNNPIDMVVGTPGRVLQHI DGNMVYGDIKYLVLDEADTMFDRGFGPDI KFLGPLKNR  K  GQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRA DHFL ENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+
Sbjct:  213 VFRVAKSIGHHARFRSTMVSGGGRMRPQEDSLNNPIDMVVGTPGRVLQHIQDGNMVYGDIKYLVLDEADTMFDRGFGPDIHKFLGPLKNRTSKSDGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAADHFLAENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 461          

HSP 2 Score: 194.512 bits (493), Expect = 1.843e-49
Identity = 123/191 (64.40%), Postives = 141/191 (73.82%), Query Frame = 2
Query:  224 YYPFLK----PSRVFRGF--KPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLP--VLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVL 772
            Y+ FLK    P+RV  GF  +P C+  S    T + D++KHS+LLERLR RHLK S K P  + +     L   VL +  E  D  K  KK K +A SFEELGLSEEVMGAV+EMGIEVPTEIQCIGIP +L+ ++VVLGSHTGSGKTLAYMLPLVQLLRRDEA+LG L KPRRPRAVVLCPTRELSEQV 
Sbjct:   26 YHTFLKLPKKPTRVLLGFNFRPLCTLSSTTAAT-ERDEVKHSILLERLRLRHLKGSKK-PQLTDTQTQTALKPVVLIEGEEEEDGFKKSKKGKKIAGSFEELGLSEEVMGAVKEMGIEVPTEIQCIGIPAILDSRTVVLGSHTGSGKTLAYMLPLVQLLRRDEALLGRLMKPRRPRAVVLCPTRELSEQVF 214          

HSP 3 Score: 134.806 bits (338), Expect = 1.334e-29
Identity = 66/82 (80.49%), Postives = 71/82 (86.59%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTK 2098
            IDYLHRTGRTARMGAKGKVTSLVA+KD  LA RIEEA+RKNESLESLTVDNVRRD AR RITEQ+GK+ KL K SN K+  K
Sbjct:  461 IDYLHRTGRTARMGAKGKVTSLVARKDQQLAARIEEAMRKNESLESLTVDNVRRDIARARITEQQGKSAKLIKASNQKSNNK 542          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A067DC73_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g047490mg PE=4 SV=1)

HSP 1 Score: 476.093 bits (1224), Expect = 5.136e-157
Identity = 225/249 (90.36%), Postives = 240/249 (96.39%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGRLR QEDSLNNPIDMVVGTPGR+LQHI+DGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFL PLKNRA KP+GQGFQT+LV+ATMTKAVQKL+DEE QGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSL+KGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP ++RVENLNKFK++DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+
Sbjct:   33 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVSATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 281          

HSP 2 Score: 87.0409 bits (214), Expect = 3.841e-15
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNES 1981
            IDYLHRTGRTARMGAKGKVTSLVAKKD+LLA+RIEEAIRKNES
Sbjct:  281 IDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIEEAIRKNES 323          

HSP 3 Score: 68.5514 bits (166), Expect = 5.745e-9
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 2
Query:  671 LLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVL 772
            LLR DEA+LG+L KPRRPRAVVLCPTRELSEQV 
Sbjct:    1 LLRHDEAMLGVLMKPRRPRAVVLCPTRELSEQVF 34          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: V4SJ90_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000567mg PE=4 SV=1)

HSP 1 Score: 486.878 bits (1252), Expect = 1.196e-156
Identity = 226/249 (90.76%), Postives = 241/249 (96.79%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGRLR QEDSLNNPIDMVVGTPGR+LQHI+DGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFL PLKNRA KP+GQGFQT+LV+ATMTKAVQKL+DEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSL+KGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP ++RVENLNKFK++DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+
Sbjct:  213 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKPNGQGFQTVLVSATMTKAVQKLVDEEFQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 461          

HSP 2 Score: 225.713 bits (574), Expect = 1.179e-59
Identity = 138/230 (60.00%), Postives = 168/230 (73.04%), Query Frame = 2
Query:  146 MQKAMMAATSRTLLFVSLLSSPKHFSYYPFLK----PS-RVFRGFKPFCSAPSPILTTI---DPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMA-DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            MQ AM  AT++T+L +SLLSS K   Y PFLK    PS RVF GF+  CS  +P  T      P+ ++HS+LL+RLR RHLK  +K  ++  S   ++L  + +E +  D  + KKKKK+++  SFEELGLSEE+MGAVREMGIEVPTEIQCIGIP VL+ KSVVLGSHTGSGKTLAYMLPLVQLLR DEA+LG+L KPRRPRAVVLCPTRELSEQV     ++   + F
Sbjct:    1 MQNAMALATTKTILSLSLLSSAKR--YRPFLKFPKNPSFRVFPGFRSLCSTSAPTATIEPPESPEQVRHSILLDRLRARHLKGPSK--TTPQSKTQESLTSIAREGKGEDFDEKKKKKKVVSVGSFEELGLSEEIMGAVREMGIEVPTEIQCIGIPAVLDGKSVVLGSHTGSGKTLAYMLPLVQLLRHDEAMLGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 226          

HSP 3 Score: 159.073 bits (401), Expect = 2.659e-37
Identity = 105/177 (59.32%), Postives = 125/177 (70.62%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKN-VKLFKTSNLKNKTK-AVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLET----------AKTSAVRKKNRSVGGSSEGKKLKVVGFRGQAS-SSKRESFTPS 2344
            IDYLHRTGRTARMGAKGKVTSLVAKKD+LLA+RIEEAIRKNESL++LT DNVRRD ARTRITEQKGK   KL K S  KNKTK A+  S +TSG++ ++ KS K++ PAK SK  VK+SK ++T          + +       +   G S   KL VVGFRG+AS S K+ S  PS
Sbjct:  461 IDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIEEAIRKNESLDALTKDNVRRDVARTRITEQKGKTAAKLMKVSRQKNKTKAALEKSSQTSGRKSSVTKSGKASTPAKSSKAAVKISKPVKTFTGSRKSSPASSSRKASSGGKMGAGKSGASKLSVVGFRGRASYSDKKASLRPS 637          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
RH39_ORYSJ6.234e-14985.54DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sa... [more]
RH39_ARATH6.444e-14684.74DEAD-box ATP-dependent RNA helicase 39 OS=Arabidop... [more]
DBP2_GIBZE1.121e-2628.17ATP-dependent RNA helicase DBP2 OS=Gibberella zeae... [more]
DBP2_SCLS11.248e-2630.08ATP-dependent RNA helicase dbp2 OS=Sclerotinia scl... [more]
DBP2_BOTFB1.281e-2630.92ATP-dependent RNA helicase dbp2 OS=Botryotinia fuc... [more]
DBP2_NEOFI1.560e-2628.86ATP-dependent RNA helicase dbp2 OS=Neosartorya fis... [more]
DDX3_DROME1.913e-2632.28ATP-dependent RNA helicase bel OS=Drosophila melan... [more]
DBP2_ASPCL2.642e-2629.32ATP-dependent RNA helicase dbp2 OS=Aspergillus cla... [more]
DRS1_CANAL5.105e-2631.23ATP-dependent RNA helicase DRS1 OS=Candida albican... [more]
DBP2_MAGO75.730e-2627.82ATP-dependent RNA helicase DBP2 OS=Magnaporthe ory... [more]

Pages

back to top
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0PKP3_GOSAR4.528e-16797.59DEAD-box ATP-dependent RNA helicase 39-like protei... [more]
A0A0D2UBN8_GOSRA1.763e-16596.79Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2V9X0_GOSRA1.823e-16596.79Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061FHR1_THECC1.399e-16194.78DEAD-box ATP-dependent RNA helicase 39 isoform 1 O... [more]
A0A067K314_JATCU7.935e-16093.57Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
U5GD25_POPTR4.442e-15993.17Uncharacterized protein OS=Populus trichocarpa GN=... [more]
B9SM71_RICCO1.110e-15893.17Dead box ATP-dependent RNA helicase, putative OS=R... [more]
B9H7X6_POPTR3.644e-15893.17Uncharacterized protein OS=Populus trichocarpa GN=... [more]
A0A067DC73_CITSI5.136e-15790.36Uncharacterized protein (Fragment) OS=Citrus sinen... [more]
V4SJ90_9ROSI1.196e-15690.76Uncharacterized protein OS=Citrus clementina GN=CI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 163..230
e-value: 5.6E-8
score: 42.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 134..231
e-value: 1.8E-18
score: 66.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 134..243
score: 11.868
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 131..235
e-value: 1.7E-25
score: 88.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..114
e-value: 5.8E-26
score: 90.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..233
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 3..98
e-value: 1.5E-18
score: 67.1
NoneNo IPR availablePANTHERPTHR24031:SF247DEAD-BOX ATP-DEPENDENT RNA HELICASE 39coord: 1..232
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..232
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..109
score: 16.495

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0098040 ID=g.barbadense_cottongen_reftransV1_0098040; Name=g.barbadense_cottongen_reftransV1_0098040; organism=Gossypium barbadense; type=contig; length=2758bp
CTACTCCCAAAGTCCCAAGAGAAAATGGATGATATTGGGACCTTACCTCC
CTAGTGCCTTGAAAGCTTCGCTAATGCTGCAAACAAATACAAAGTAGCAG
CAGGGAAAACAAAACCAAAAACTATATCTGGCCTCACAGAACATGATGCA
GAAAGCTATGATGGCTGCTACTTCAAGAACTCTCCTTTTTGTCTCTCTTC
TTTCCTCTCCCAAACATTTCTCTTACTACCCTTTTCTCAAACCCTCTAGG
GTTTTTCGAGGGTTTAAGCCTTTCTGCTCTGCCCCATCCCCAATCCTCAC
CACCATTGATCCTGACGACTTGAAACACTCCATGCTACTTGAAAGGCTTA
GAACCAGACATCTCAAACATTCTGCGAAACTCCCATCCTCATCACCCTCT
ATGCCTCCACAAAACCTGCCTGTTTTGGGTCAAGAGACCGAGGCTTATGA
TAAGGGGAAAGGGAAAAAGAAGAAGAAAATTATGGCCGATAGTTTTGAGG
AGTTGGGTTTGAGTGAAGAAGTGATGGGTGCTGTTAGAGAGATGGGGATT
GAAGTTCCTACTGAGATTCAGTGTATCGGGATTCCTTTTGTATTGGAAGA
GAAAAGTGTGGTTTTGGGTTCTCATACTGGCTCTGGCAAGACTCTTGCAT
ACATGTTGCCACTTGTTCAGTTGCTGAGGCGGGATGAGGCAATATTAGGC
ATGCTAACAAAGCCCAGGCGTCCACGAGCCGTTGTTCTATGCCCCACAAG
AGAGCTGTCTGAGCAGGTTTTGGTTACTCACCCTGCTATGATTTGGACCT
CCGAATTTGTTCTATATTTATAGACTTTGACTTTTATCACTTGGGAGCAT
CCAAGATGAAAGTCTCTTGCACAGTTTTGAGTGAGAGAAAGAATAGAGGA
ATCCTCTTTTCGACTCTTACTCTCCCACTCTGCTCACTTCTTTTCTTTTT
GTTACTAGATTAATGTTAGTGGCTTTTTAGGTTTTTAGTGTGGCAAAGTC
TATTAGCCATCATGCAAGATTTAGGTCTACTATGGTCAGTGGGGGAGGCC
GGTTAAGATCACAAGAGGACTCTTTGAATAACCCAATTGACATGGTAGTT
GGGACCCCTGGTAGGGTCCTTCAACATATTGATGACGGGAACATGGTTTA
TGGTGACATCAAATACTTGGTTTTGGATGAGGCTGACACTATGTTTGACC
GTGGCTTTGGTCCTGACATTCGCAAGTTTCTTGGTCCATTAAAAAATCGT
GCTCTAAAACCCAGTGGCCAAGGATTTCAAACTATTTTAGTGACAGCTAC
AATGACAAAGGCTGTGCAGAAACTGATTGATGAGGAATTTCAAGGAATAG
AACATCTACGAACATCAACACTGCACAAGAAAATAGCATCTGCTCGTCAT
GATTTCATCAAACTTTTGGGTTCTGAAAACAAGCTGGAAGCATTACTGCA
GGTTCTTGAGCCAAGTTTAGCTAAGGGGAACAGAGTAATGGTGTTTTGTA
ATACATTAAATTCTAGCCGTGCTGTTGATCATTTTCTTGGTGAAAATCAG
ATCTCTACTGTAAATTACCATGGCGAGGTGCCTCCAGAACAAAGGGTTGA
AAACCTGAACAAGTTCAAGAGTGATGATGGAGACTGTCCCACATTGGTTT
GCACGGACTTGGCTGCTAGAGGGCTGGACTTGGATGTTAATCATGTTGTC
ATGTTTGATTTCCCTTTAAACTCTGTAAGCAACATTTCTTTGATCAACTT
GTTTGGGTCTTAGCTTGCCCTTCTCTCAAACCTGAACTCCTTTGCTTTTG
TGCCCCCTTTCTTTATGGTTCTATTTTTTCTCACTTCTGTTTGGCCTTTT
AGATCGACTACCTTCATCGCACTGGAAGAACTGCACGAATGGGTGCCAAA
GGGAAAGTAACAAGTTTGGTGGCTAAAAAGGACTTATTGTTGGCAGAAAG
GATAGAGGAGGCAATAAGAAAGAATGAGAGTTTGGAATCTCTTACAGTTG
ATAATGTCCGAAGGGATACTGCAAGGACTCGGATTACCGAGCAGAAGGGG
AAGAATGTTAAACTGTTTAAGACGTCGAATCTGAAAAACAAGACCAAAGC
TGTGTCTGCATCTGTGCGGACATCAGGGAAAGAACCCACAATTGCAAAGT
CGGTAAAATCTACTGCTCCAGCCAAACCTTCAAAGAAAATAGTTAAGGTC
TCAAAAAGTTTGGAGACTGCAAAAACATCTGCCGTACGAAAGAAAAACAG
GTCAGTTGGTGGGAGTTCTGAAGGCAAAAAACTGAAGGTTGTTGGATTTA
GGGGACAAGCTTCCTCGAGCAAGAGAGAATCGTTTACACCAAGTTGATTG
TGGTCAAAGTTTGGAATTCTGCAAATGGCTTTTAACATGTTATCAATCAA
TAGTTGAAAAAAAAAATCATGTTAAATTCATATCTCTCTTATCTTAGCAC
TTAGAATTGATTGCAACACATCTATATTTGTTTTTCCACTTTGCACCCTT
AAAGGTTAGCTGAGGATGTCTTAGTGGGAGTTTATATTAGCCTGTTGTGC
AGAAAATTCATACATGGATTGGGGATAGAGATTTAAGGGTTCCCCCCCCC
CCCTCCTGTATGGATGGGTATTGATTTTGTTCCATTACGACTGTTAATGC
AACGCATAGAATTCAGTAGTGCTTAGGGTTATAAATATACCAGGAGGAGG
TTTGTTTTTACAGGATATTCTGATATTTTGAACATTTTCTATCAATTATG
TTGACAGG
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C-like
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding