g.barbadense_cottongen_reftransV1_0098040, g.barbadense_cottongen_reftransV1_0098040 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: RH39_ORYSJ (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica GN=Os01g0184500 PE=2 SV=1) HSP 1 Score: 461.455 bits (1186), Expect = 6.234e-149 Identity = 213/249 (85.54%), Postives = 232/249 (93.17%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGG R+R QEDSLN P+DMVVGTPGR+L HI DGNMVYGDIKYLVLDEADTMFD+GFGPDIRKFL PLKNRA KP QGFQT+LVTATMTKAVQKLIDEEF+GI HLRT+T K++A+ARHDFIKL GSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP E+RVENLNKF++++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+ Sbjct: 203 VFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSI 451 HSP 2 Score: 174.096 bits (440), Expect = 3.384e-44 Identity = 93/162 (57.41%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 323 KHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 +H +LLERLR RHLK +P+++P + G A + + ++ + + DSFEELGL EEVM A+ EMGI PTEIQC+G+P VL SVVLGSHTGSGKTLAY+LPLVQLLRRDEA+LGM KPRRPRAVVLCPTREL+EQV ++ + F Sbjct: 60 RHELLLERLRQRHLKG---VPAATPRPAQREKGRGGGGGGAQELQQKRRVEVV--DSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARF 216 HSP 3 Score: 102.064 bits (253), Expect = 5.851e-21 Identity = 73/171 (42.69%), Postives = 95/171 (55.56%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSG--KEPTIAKSV---------KSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSE-----GKKLKVVGFRGQASS 2317 IDYLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEA++KNESLE+LT +NVRR + T KG+ L K N K + + V+ ++S K+ T ++ KST+ K + + + R G + G KL VVGFRG++S Sbjct: 451 IDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEAMKKNESLEALTTNNVRRAAVNPQYTSTKGRPSAL-KVVNQKGR-RGVALQTKSSRIVKDTTSSRRRSPIRSQPRSKSTSSGKAKPVRSAKPSKSSSPSPKVAKSRPRPEGRKGDALNKLGSKLSVVGFRGRSSG 619
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: RH39_ARATH (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana GN=RH39 PE=2 SV=2) HSP 1 Score: 453.366 bits (1165), Expect = 6.444e-146 Identity = 211/249 (84.74%), Postives = 230/249 (92.37%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 V+ VAKSISHHARFRS +VSGG R+R QEDSLNN IDMVVGTPGR+LQHI++GNMVYGDI YLVLDEADTMFDRGFGP+IRKFL PL RALK + QGFQT+LVTATMT AVQKL+DEEFQGIEHLRTSTLHKKIA+ARHDFIKL G E+KLEALLQVLEPSLAKG++VMVFCNTLNSSRAVDH+L ENQISTVNYHGEVP EQRVENL KFK ++GDCPTLVCTDLAARGLDLDV+HVVMFDFP NS+ Sbjct: 205 VYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSI 453 HSP 2 Score: 185.267 bits (469), Expect = 6.368e-48 Identity = 127/216 (58.80%), Postives = 148/216 (68.52%), Query Frame = 2 Query: 161 MAATSRTLLFVSLLSSPKHFS----YYPFL---KPSRVFRGFKPFCSA------PSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769 M SRT+L +SL SS FS +PFL KP R F+P SA P+ DPD LKH++LLERLR RHLK SAK P PS V+G E E+ +KK K + ++F+ELGLSEEVMGA++E+ IEVPTEIQCIGIP V+E KSVVLGSHTGSGKTLAY+LP+VQL+R DEA LG TKPRRPR VVLCPTRELSEQV Sbjct: 1 MVGASRTILSLSLSSSLFTFSKIPHVFPFLRLHKP-RFHHAFRPLYSAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKPPQQRPS------SVVGVEEES----SIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQV 205 HSP 3 Score: 135.961 bits (341), Expect = 8.230e-32 Identity = 80/167 (47.90%), Postives = 108/167 (64.67%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVK----LFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXS------LETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSK 2323 IDYLHRTGRTARMGAKGKVTSLV++KD +LA RIEEA+R NESLESLT DNVRRD ART IT++KG++VK + K N ++K + S R++G + + KS S+ S L+T + ++ + ++ GKKL VVGFRG++SS++ Sbjct: 453 IDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQRNSRDKPSSSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGSRSIAARGKTGSDRRPGKKLSVVGFRGKSSSAR 619
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_GIBZE (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.121e-26 Identity = 71/252 (28.17%), Postives = 129/252 (51.19%), Query Frame = 3 Query: 996 KSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 K +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK +G ++P QT++ +AT K V+ L + Q + ++ ++++ K + +++ +E + K N++++F T + + FL ++ ++ HG+ +R L++FK+ G P +V TD+A+RG+D+ ++ HV+ +D+P NS I I Sbjct: 228 KKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG-----QIRPDR---QTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 469 HSP 2 Score: 31.5722 bits (70), Expect = 1.121e-26 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R GA G +L Sbjct: 464 DYIHRIGRTGRAGAMGTAITL 484 HSP 3 Score: 57.3806 bits (137), Expect = 4.584e-7 Identity = 36/94 (38.30%), Postives = 48/94 (51.06%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769 ++F+E G VM V+ G PT IQ G P L + VV + TGSGKTL Y LP + + +L P +VL PTREL+ Q+ Sbjct: 134 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQP----LLAPGDGPIVLVLAPTRELAVQI 223
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_SCLS1 (ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.248e-26 Identity = 74/246 (30.08%), Postives = 123/246 (50.00%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L +++ + TPGR++ I+ G + YLVLDEAD M D GF P IRK LG ++P QT + +AT K V+ L + + +L ++++ K + + + LE + K N++++F T + + FL ++ ++ HG+ +R LN+FK+ G P +V TD+A+RG+D+ ++ HV +D+P NS I I Sbjct: 249 SRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILG-----QIRPDR---QTCMWSATWPKEVRALASDYLNDFIQVNIGSLELSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRI 484 HSP 2 Score: 32.3426 bits (72), Expect = 1.248e-26 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R G KG +L Sbjct: 479 DYIHRIGRTGRAGQKGTAITL 499 HSP 3 Score: 56.9954 bits (136), Expect = 6.540e-7 Identity = 38/99 (38.38%), Postives = 50/99 (50.51%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G VM V+ G PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P +VL PTREL+ Q+ Sbjct: 149 ETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 238
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_BOTFB (ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp2 PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 1.281e-26 Identity = 77/249 (30.92%), Postives = 126/249 (50.60%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARH---DFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L +++ + TPGR++ I+ G + YLVLDEAD M D GF P IRK LG ++P QT + +AT K V+ L + + +L SA H ++++ K + + + LE + K N++++F T + + FL ++ ++ HG+ +R LN+FK+ G P +V TD+A+RG+D+ ++ HV +D+P NS I I Sbjct: 202 SRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILG-----QIRPDR---QTCMWSATWPKEVRALASDYLNEFIQVNIGSLE---LSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRI 437 HSP 2 Score: 32.3426 bits (72), Expect = 1.281e-26 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R G KG +L Sbjct: 432 DYIHRIGRTGRAGQKGTAITL 452 HSP 3 Score: 56.9954 bits (136), Expect = 6.497e-7 Identity = 38/99 (38.38%), Postives = 50/99 (50.51%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G VM V+ G PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P +VL PTREL+ Q+ Sbjct: 102 ETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 191
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.560e-26 Identity = 71/246 (28.86%), Postives = 127/246 (51.63%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK + ++P QT + +AT K V++L + + ++ ++++ K + +++ LE + +GN+ ++F T + + FL ++ ++ HG+ ++R LN+FK+ G P +V TD+A+RG+D+ D+ HV+ +D+P NS I I Sbjct: 219 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIS-----QIRPD---RQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT--GKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRI 454 HSP 2 Score: 33.113 bits (74), Expect = 1.560e-26 Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSLVAKKD 1933 DY+HR GRT R GAKG + ++ Sbjct: 449 DYIHRIGRTGRAGAKGTAITFFTTEN 474 HSP 3 Score: 59.3066 bits (142), Expect = 1.321e-7 Identity = 37/99 (37.37%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G + V+ V+ G E PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P ++L PTREL+ Q+ Sbjct: 119 ENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLILAPTRELAVQI 208
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DDX3_DROME (ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.913e-26 Identity = 82/254 (32.28%), Postives = 127/254 (50.00%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHL---RTSTLHKKIASARHDFIKLLGSENKLEALLQVLE-----PSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLD-VNHVVMFDFP 1715 +F AK ++ +R R ++ GG Q L+ ++V TPGR+ I G + +I++LVLDEAD M D GF P IR+ + L + P+GQ QT++ +AT K +Q+L + L R + + I I + +K LL +L P K + ++F T + +++ FL + + HG+ ++R E L F+S GDCP LV T +AARGLD+ V HV+ FD P Sbjct: 394 IFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLN---MPPTGQ-RQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQT----ILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRS--GDCPILVATAVAARGLDIPHVKHVINFDLP 637
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_ASPCL (ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.642e-26 Identity = 73/249 (29.32%), Postives = 130/249 (52.21%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARH---DFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK + ++P QT + +AT K V++L + + ++ SA H ++++ K + +++ LE + + N++++F T + + FL ++ ++ HG+ ++R LN+FK+ G P +V TD+A+RG+D+ D+ HV+ +D+P NS I I Sbjct: 225 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIS-----QIRPD---RQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMD---LSANHRITQIVEVVSDFEKRDKMIKHLEKIMEDRSNKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKA--GKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRI 460 HSP 2 Score: 33.113 bits (74), Expect = 2.642e-26 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R GAKG + Sbjct: 455 DYIHRIGRTGRAGAKGTAITF 475 HSP 3 Score: 59.6918 bits (143), Expect = 7.854e-8 Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G + V+ V+ G E PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P +VL PTREL+ Q+ Sbjct: 125 ETFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 214
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DRS1_CANAL (ATP-dependent RNA helicase DRS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DRS1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.105e-26 Identity = 84/269 (31.23%), Postives = 133/269 (49.44%), Query Frame = 3 Query: 918 YSPTLLTSFLFVTRLMLVAF*VFSVAKSISHHAR-FRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDG-NMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFP 1715 Y P+ T + +T +A V+ K +SHH + GG LR QE+ L D+V+ TPGR++ HI + + DI+ LV+DEAD M + GF ++ + L +L P + QT+L +ATM +Q LI Q + + F+++ + ALL L ++ +RV+VF ++ + LG + HG + EQR++N+ FKS + P L+CTDLAARGLD+ + V+ +D P Sbjct: 194 YKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEIL------SLIPKHKR-QTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIRKRDQLKPALLYQLLKGVS--SRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKS--LEVPVLICTDLAARGLDIPKIELVINYDMP 451 HSP 2 Score: 63.5438 bits (153), Expect = 6.287e-9 Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 2 Query: 491 SFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPR-RPRAVVLCPTRELSEQV 769 SF+ L LS V+ + E+ PT IQ IP L K +V G+ TGSGKT AYM+P+++ L L KP + ++L PTREL+ QV Sbjct: 131 SFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERL---------LYKPSTSTKVIILTPTRELALQV 215
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_MAGO7 (ATP-dependent RNA helicase DBP2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DBP2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.730e-26 Identity = 69/248 (27.82%), Postives = 127/248 (51.21%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSL---AKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK +G ++P QT++ +AT K V+ + + Q + +L ++++ K + +++ +E + N++++F T + + FL ++ ++ HG+ +R L++FK+ G P +V TD+A+RG+D+ ++ HV+ +D+P NS I I Sbjct: 225 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG-----QIRPD---RQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 462 HSP 2 Score: 33.113 bits (74), Expect = 5.730e-26 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R GAKG + Sbjct: 457 DYIHRIGRTGRAGAKGTAITF 477 HSP 3 Score: 57.7658 bits (138), Expect = 3.479e-7 Identity = 37/99 (37.37%), Postives = 50/99 (50.51%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G VM V+ G PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P ++L PTREL+ Q+ Sbjct: 125 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLILAPTRELAVQI 214
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A0B0PKP3_GOSAR (DEAD-box ATP-dependent RNA helicase 39-like protein OS=Gossypium arboreum GN=F383_09943 PE=4 SV=1) HSP 1 Score: 513.457 bits (1321), Expect = 4.528e-167 Identity = 243/249 (97.59%), Postives = 245/249 (98.39%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHV+MFDFPLNS+ Sbjct: 209 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVIMFDFPLNSI 457 HSP 2 Score: 362.459 bits (929), Expect = 2.105e-109 Identity = 202/222 (90.99%), Postives = 208/222 (93.69%), Query Frame = 2 Query: 143 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 MMQKAMMAATSRTLL VSLLSSPKHFSYYPFLKPSRVFRGFK FC+APSPI TT+DPDDLKHSMLLERLRTRHL+HS KLPSSSPS PPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 1 MMQKAMMAATSRTLLSVSLLSSPKHFSYYPFLKPSRVFRGFKAFCNAPSPIPTTVDPDDLKHSMLLERLRTRHLRHSTKLPSSSPSKPPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 222 HSP 3 Score: 273.092 bits (697), Expect = 2.262e-76 Identity = 157/164 (95.73%), Postives = 160/164 (97.56%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFK SN KNKTKAVSASV TSGK+PTIAKSVKSTAPAKPSKKIVKVSKSL+TAKTSAV KKNRS+GGSSEGKKLKVVGFRGQASSSKRESFTPS Sbjct: 457 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKASNQKNKTKAVSASVLTSGKKPTIAKSVKSTAPAKPSKKIVKVSKSLKTAKTSAVGKKNRSIGGSSEGKKLKVVGFRGQASSSKRESFTPS 620
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A0D2UBN8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G134100 PE=4 SV=1) HSP 1 Score: 509.22 bits (1310), Expect = 1.763e-165 Identity = 241/249 (96.79%), Postives = 244/249 (97.99%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKP+GQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASA HDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHV+MFDFPLNS+ Sbjct: 209 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPNGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASAHHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVIMFDFPLNSI 457 HSP 2 Score: 386.726 bits (992), Expect = 1.560e-118 Identity = 208/222 (93.69%), Postives = 212/222 (95.50%), Query Frame = 2 Query: 143 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIP VLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEA+LGMLTKPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 1 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPSVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAMLGMLTKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 222 HSP 3 Score: 276.944 bits (707), Expect = 8.332e-78 Identity = 160/164 (97.56%), Postives = 162/164 (98.78%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIE AIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSN KNKTKAVSASVRTSGKEPTIAKSVKSTAPAKPSKKIVKVSKSL+TAKTSAV+KKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS Sbjct: 457 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEAAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNQKNKTKAVSASVRTSGKEPTIAKSVKSTAPAKPSKKIVKVSKSLKTAKTSAVQKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 620
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A0D2V9X0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G134100 PE=4 SV=1) HSP 1 Score: 508.834 bits (1309), Expect = 1.823e-165 Identity = 241/249 (96.79%), Postives = 244/249 (97.99%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKP+GQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASA HDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHV+MFDFPLNS+ Sbjct: 209 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPNGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASAHHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVIMFDFPLNSI 457 HSP 2 Score: 385.956 bits (990), Expect = 2.122e-118 Identity = 208/222 (93.69%), Postives = 212/222 (95.50%), Query Frame = 2 Query: 143 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIP VLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEA+LGMLTKPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 1 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDKGKGKKKKKIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPSVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAMLGMLTKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 222 HSP 3 Score: 239.965 bits (611), Expect = 7.238e-65 Identity = 145/164 (88.41%), Postives = 147/164 (89.63%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344 IDYLHRTGRTARMGAK ERIE AIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSN KNKTKAVSASVRTSGKEPTIAKSVKSTAPAKPSKKIVKVSKSL+TAKTSAV+KKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS Sbjct: 457 IDYLHRTGRTARMGAK---------------ERIEAAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNQKNKTKAVSASVRTSGKEPTIAKSVKSTAPAKPSKKIVKVSKSLKTAKTSAVQKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 605
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A061FHR1_THECC (DEAD-box ATP-dependent RNA helicase 39 isoform 1 OS=Theobroma cacao GN=TCM_035812 PE=4 SV=1) HSP 1 Score: 499.204 bits (1284), Expect = 1.399e-161 Identity = 236/249 (94.78%), Postives = 242/249 (97.19%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QEDSLN PIDMVVGTPGRVLQHI+DGNMVYGDIKYLVLDEADTMFD GFGPDIRKFLGPLKN ALKP+GQGFQTILVTATMTKAV+KLIDEEFQGIEHLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 208 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNKPIDMVVGTPGRVLQHIEDGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFLGPLKNHALKPNGQGFQTILVTATMTKAVEKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 456 HSP 2 Score: 283.878 bits (725), Expect = 3.179e-80 Identity = 158/225 (70.22%), Postives = 178/225 (79.11%), Query Frame = 2 Query: 143 MMQKAMMAATSRTLLFVSLLSSPKHFSYYPFLK---PSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 MMQKAMM TSRTLL +SLLSS KHF +YPFLK PSRV GFKP C+A +P T I+PD L+HSMLLERLRTRHLK S + PS PS P + + +E +A DKGK +KK M +SFEELGLSEEVMGAVREMGIEVPTEIQCIG+P VL+ +SVVLGSHTGSGKTLAYMLPLVQLLR DEA+LGMLTKPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 1 MMQKAMMGGTSRTLLSISLLSSTKHFCHYPFLKLPKPSRVLPGFKPLCTATAPTPTIIEPDQLRHSMLLERLRTRHLKDSTRTPS--PSKPQEKVTAFDKEGDASDKGKKRKKG--MVESFEELGLSEEVMGAVREMGIEVPTEIQCIGVPSVLQGRSVVLGSHTGSGKTLAYMLPLVQLLRLDEALLGMLTKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 221 HSP 3 Score: 209.149 bits (531), Expect = 2.928e-54 Identity = 124/164 (75.61%), Postives = 140/164 (85.37%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344 IDYLHRTGRTARMGAKGKVTSLVAKK++LLAERIEEAIRKNESLESLT NVRRD AR +ITEQKGKN KL K SN KNKTKAVSA + SGK+P+IAKSVKS A+PSKKI+KVSK++++AK S+V KKNRS G +S KKL VVGFRG+ASSSK +SF S Sbjct: 456 IDYLHRTGRTARMGAKGKVTSLVAKKNVLLAERIEEAIRKNESLESLTAVNVRRDIARAQITEQKGKNAKLIKVSNQKNKTKAVSAHI--SGKKPSIAKSVKSPTAARPSKKIIKVSKNMKSAKASSVGKKNRSSGVNSTAKKLSVVGFRGRASSSKTDSFRRS 617
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A067K314_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22268 PE=4 SV=1) HSP 1 Score: 494.967 bits (1273), Expect = 7.935e-160 Identity = 233/249 (93.57%), Postives = 239/249 (95.98%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGG RLR QEDSLNNPIDM+VGTPGR+LQHI+DGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRA KP GQGFQTILVTATMTKAVQKLIDEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQ+STVNYHGEVP EQRVENL KFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNSV Sbjct: 216 VFRVAKSISHHARFRSTMVSGGSRLRPQEDSLNNPIDMIVGTPGRLLQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRASKPDGQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLAENQMSTVNYHGEVPAEQRVENLQKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSV 464 HSP 2 Score: 205.682 bits (522), Expect = 5.222e-53 Identity = 139/234 (59.40%), Postives = 161/234 (68.80%), Query Frame = 2 Query: 161 MAATSRTLLFVSLLSSPKHFSYYPFLK---PSRVFR--GFKPFCSAPSPILTTI-------------DPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 MA TSRTLL +SL S+ KH Y+PFLK PSRV FKP C+A S + PD+ KHS+LLERLR RHLK S K P + PP+ + +E + ++K K KK M SFEELGLSEEVMGAVREM IEVPTEIQCIG+P +LE KSVVLGSHTGSGKTLAYMLPLVQLLR+DEA+LG+L KPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 1 MAGTSRTLLSLSLSSATKH--YHPFLKFPKPSRVLLDFSFKPLCTATSTTASATATATATATTTTISGPDEEKHSILLERLRLRHLKDSRKHPQAKTQSPPKPSVAIEKEEDGFNKSKKGKK---MVGSFEELGLSEEVMGAVREMEIEVPTEIQCIGVPAILEGKSVVLGSHTGSGKTLAYMLPLVQLLRQDEALLGILMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 229 HSP 3 Score: 147.517 bits (371), Expect = 1.235e-33 Identity = 94/168 (55.95%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKK----NRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344 ++YLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEAI+KNESLESLTVDNVRRD AR +IT QKGK+ KL K S KNK KA ASV++S + SV + A + K VK + KTS V K +S G S KL VV RG++S+S ++S S Sbjct: 464 VNYLHRTGRTARMGAKGKVTSLVAKKDVQLATRIEEAIKKNESLESLTVDNVRRDIARAQITAQKGKSAKLMKQSTQKNKIKA--ASVKSSTDHTKASSSVNKSVKAVKAAKTVKF-----SKKTSQVLNKRTGSKKSSGVKSTASKLSVVPLRGRSSASNKKSLRSS 624
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: U5GD25_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22020g PE=4 SV=1) HSP 1 Score: 493.812 bits (1270), Expect = 4.442e-159 Identity = 232/249 (93.17%), Postives = 236/249 (94.78%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSI HHARFRSTMVSGGGR+R QEDSLNNPIDMVVGTPGRVLQHI DGNMVYGDIKYLVLDEADTMFDRGFGPDI KFLGPLKNR K GQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRA DHFL ENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 213 VFRVAKSIGHHARFRSTMVSGGGRMRPQEDSLNNPIDMVVGTPGRVLQHIQDGNMVYGDIKYLVLDEADTMFDRGFGPDIHKFLGPLKNRTSKSDGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAADHFLAENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 461 HSP 2 Score: 196.052 bits (497), Expect = 1.463e-49 Identity = 123/192 (64.06%), Postives = 141/192 (73.44%), Query Frame = 2 Query: 224 YYPFLK----PSRVFRGF--KPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVL---GQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVL 772 Y+ FLK P+RV GF +P C+ S T + D++KHS+LLERLR RHLK S K + PV+ G+E E D K KK K +A SFEELGLSEEVMGAV+EMGIEVPTEIQCIGIP +L+ ++VVLGSHTGSGKTLAYMLPLVQLLRRDEA+LG L KPRRPRAVVLCPTRELSEQV Sbjct: 26 YHTFLKLPKKPTRVLLGFNFRPLCTLSSTTAAT-ERDEVKHSILLERLRLRHLKGSKKPQLTDTQTQTALKPVVLIEGEEEE--DGFKKSKKGKKIAGSFEELGLSEEVMGAVKEMGIEVPTEIQCIGIPAILDSRTVVLGSHTGSGKTLAYMLPLVQLLRRDEALLGRLMKPRRPRAVVLCPTRELSEQVF 214 HSP 3 Score: 150.599 bits (379), Expect = 1.790e-34 Identity = 98/190 (51.58%), Postives = 120/190 (63.16%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKA-----------VSASVRTSGKEPTIAKSVKSTXXXXXXXXX----------XXXXXSLETAK----TSAVRKKNRSVGGSSEGKKLKVVGFRGQASSS-KRESFTPS 2344 IDYLHRTGRTARMGAKGKVTSLVA+KD LA RIEEA+RKNESLESLTVDNVRRD AR RITEQ+GK+ KL K SN K+ K+ ++SV SGK T A++ ST+ + K K+++ AK +SA + S G + KL+VV FRG++SSS K+ES PS Sbjct: 461 IDYLHRTGRTARMGAKGKVTSLVARKDQQLAARIEEAMRKNESLESLTVDNVRRDIARARITEQQGKSAKLIKASNQKSNNKSATDKPPSARTKATSSVMKSGKPSTSARTKASTSVRTKATSSVKKYGKASTPAKSVKAVKVAKRVKSSSASYSRKTSPGVKKQVGKLRVVAFRGRSSSSNKKESLRPS 650
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: B9SM71_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_0296470 PE=4 SV=1) HSP 1 Score: 491.115 bits (1263), Expect = 1.110e-158 Identity = 232/249 (93.17%), Postives = 239/249 (95.98%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGR+R QEDSLN+PIDM+VGTPGR+LQHI+DGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRA KP G GFQTILVTATMTKAVQKLIDEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP EQRVENL KFKSDDGDCPTLVCTDLAARGLDLDV+HVVMFDFPLNS+ Sbjct: 214 VFRVAKSISHHARFRSTMVSGGGRMRPQEDSLNSPIDMIVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRASKPDGLGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLAENQISTVNYHGEVPAEQRVENLQKFKSDDGDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSI 462 HSP 2 Score: 204.527 bits (519), Expect = 8.604e-53 Identity = 130/212 (61.32%), Postives = 145/212 (68.40%), Query Frame = 2 Query: 212 KHFSYYPFL---KPSRVFRGF--KPFCSAPSPILTTI--------DPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 KH YYPFL KPSRV GF KP C+ + T DPD KHS+LLERLR RHLK+S+K Q V+ ETE D KK K +A SFEEL LS+EVMGAVREM IEVPTEIQCIGIP VL+ KSVVLGSHTGSGKTLAYMLPLVQLLRRDEA+LG+L KPRRPRA+VLCPTRELSEQV ++ + F Sbjct: 18 KH--YYPFLRFPKPSRVLLGFNFKPLCTTTASATVTETSTTTTFSDPDQAKHSILLERLRLRHLKNSSKTQQLKTQTQTQTKLVVNVETEKDDSFNKSKKGKKIAGSFEELSLSDEVMGAVREMEIEVPTEIQCIGIPAVLDGKSVVLGSHTGSGKTLAYMLPLVQLLRRDEALLGLLMKPRRPRAIVLCPTRELSEQVFRVAKSISHHARF 227 HSP 3 Score: 68.1662 bits (165), Expect = 2.159e-8 Identity = 48/115 (41.74%), Postives = 54/115 (46.96%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAV-----------SASVRTSGKEPTIAKSVKST 2164 IDYLHRTGRTARMGAK DNVRRD AR +ITEQKGK KL K S+ KNK + ++SV S K T AKSVK+ Sbjct: 462 IDYLHRTGRTARMGAK---------------------------------DNVRRDIARAQITEQKGKKAKLIKLSSQKNKINTIADKSSTNSTKAASSVNKSRKASTPAKSVKAV 543
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: B9H7X6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22020g PE=4 SV=2) HSP 1 Score: 488.804 bits (1257), Expect = 3.644e-158 Identity = 232/249 (93.17%), Postives = 236/249 (94.78%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSI HHARFRSTMVSGGGR+R QEDSLNNPIDMVVGTPGRVLQHI DGNMVYGDIKYLVLDEADTMFDRGFGPDI KFLGPLKNR K GQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRA DHFL ENQISTVNYHGEVP EQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 213 VFRVAKSIGHHARFRSTMVSGGGRMRPQEDSLNNPIDMVVGTPGRVLQHIQDGNMVYGDIKYLVLDEADTMFDRGFGPDIHKFLGPLKNRTSKSDGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAADHFLAENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 461 HSP 2 Score: 194.512 bits (493), Expect = 1.843e-49 Identity = 123/191 (64.40%), Postives = 141/191 (73.82%), Query Frame = 2 Query: 224 YYPFLK----PSRVFRGF--KPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLP--VLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVL 772 Y+ FLK P+RV GF +P C+ S T + D++KHS+LLERLR RHLK S K P + + L VL + E D K KK K +A SFEELGLSEEVMGAV+EMGIEVPTEIQCIGIP +L+ ++VVLGSHTGSGKTLAYMLPLVQLLRRDEA+LG L KPRRPRAVVLCPTRELSEQV Sbjct: 26 YHTFLKLPKKPTRVLLGFNFRPLCTLSSTTAAT-ERDEVKHSILLERLRLRHLKGSKK-PQLTDTQTQTALKPVVLIEGEEEEDGFKKSKKGKKIAGSFEELGLSEEVMGAVKEMGIEVPTEIQCIGIPAILDSRTVVLGSHTGSGKTLAYMLPLVQLLRRDEALLGRLMKPRRPRAVVLCPTRELSEQVF 214 HSP 3 Score: 134.806 bits (338), Expect = 1.334e-29 Identity = 66/82 (80.49%), Postives = 71/82 (86.59%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTK 2098 IDYLHRTGRTARMGAKGKVTSLVA+KD LA RIEEA+RKNESLESLTVDNVRRD AR RITEQ+GK+ KL K SN K+ K Sbjct: 461 IDYLHRTGRTARMGAKGKVTSLVARKDQQLAARIEEAMRKNESLESLTVDNVRRDIARARITEQQGKSAKLIKASNQKSNNK 542
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A067DC73_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g047490mg PE=4 SV=1) HSP 1 Score: 476.093 bits (1224), Expect = 5.136e-157 Identity = 225/249 (90.36%), Postives = 240/249 (96.39%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QEDSLNNPIDMVVGTPGR+LQHI+DGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFL PLKNRA KP+GQGFQT+LV+ATMTKAVQKL+DEE QGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSL+KGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP ++RVENLNKFK++DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 33 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLVPLKNRASKPNGQGFQTVLVSATMTKAVQKLVDEECQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 281 HSP 2 Score: 87.0409 bits (214), Expect = 3.841e-15 Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNES 1981 IDYLHRTGRTARMGAKGKVTSLVAKKD+LLA+RIEEAIRKNES Sbjct: 281 IDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIEEAIRKNES 323 HSP 3 Score: 68.5514 bits (166), Expect = 5.745e-9 Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 2 Query: 671 LLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVL 772 LLR DEA+LG+L KPRRPRAVVLCPTRELSEQV Sbjct: 1 LLRHDEAMLGVLMKPRRPRAVVLCPTRELSEQVF 34
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: V4SJ90_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000567mg PE=4 SV=1) HSP 1 Score: 486.878 bits (1252), Expect = 1.196e-156 Identity = 226/249 (90.76%), Postives = 241/249 (96.79%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QEDSLNNPIDMVVGTPGR+LQHI+DGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFL PLKNRA KP+GQGFQT+LV+ATMTKAVQKL+DEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSL+KGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP ++RVENLNKFK++DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 213 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNNPIDMVVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKPNGQGFQTVLVSATMTKAVQKLVDEEFQGIAHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLSKGNKVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAQERVENLNKFKNEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 461 HSP 2 Score: 225.713 bits (574), Expect = 1.179e-59 Identity = 138/230 (60.00%), Postives = 168/230 (73.04%), Query Frame = 2 Query: 146 MQKAMMAATSRTLLFVSLLSSPKHFSYYPFLK----PS-RVFRGFKPFCSAPSPILTTI---DPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMA-DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 MQ AM AT++T+L +SLLSS K Y PFLK PS RVF GF+ CS +P T P+ ++HS+LL+RLR RHLK +K ++ S ++L + +E + D + KKKKK+++ SFEELGLSEE+MGAVREMGIEVPTEIQCIGIP VL+ KSVVLGSHTGSGKTLAYMLPLVQLLR DEA+LG+L KPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 1 MQNAMALATTKTILSLSLLSSAKR--YRPFLKFPKNPSFRVFPGFRSLCSTSAPTATIEPPESPEQVRHSILLDRLRARHLKGPSK--TTPQSKTQESLTSIAREGKGEDFDEKKKKKKVVSVGSFEELGLSEEIMGAVREMGIEVPTEIQCIGIPAVLDGKSVVLGSHTGSGKTLAYMLPLVQLLRHDEAMLGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 226 HSP 3 Score: 159.073 bits (401), Expect = 2.659e-37 Identity = 105/177 (59.32%), Postives = 125/177 (70.62%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKN-VKLFKTSNLKNKTK-AVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLET----------AKTSAVRKKNRSVGGSSEGKKLKVVGFRGQAS-SSKRESFTPS 2344 IDYLHRTGRTARMGAKGKVTSLVAKKD+LLA+RIEEAIRKNESL++LT DNVRRD ARTRITEQKGK KL K S KNKTK A+ S +TSG++ ++ KS K++ PAK SK VK+SK ++T + + + G S KL VVGFRG+AS S K+ S PS Sbjct: 461 IDYLHRTGRTARMGAKGKVTSLVAKKDVLLADRIEEAIRKNESLDALTKDNVRRDVARTRITEQKGKTAAKLMKVSRQKNKTKAALEKSSQTSGRKSSVTKSGKASTPAKSSKAAVKISKPVKTFTGSRKSSPASSSRKASSGGKMGAGKSGASKLSVVGFRGRASYSDKKASLRPS 637 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098040 ID=g.barbadense_cottongen_reftransV1_0098040; Name=g.barbadense_cottongen_reftransV1_0098040; organism=Gossypium barbadense; type=contig; length=2758bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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