g.barbadense_cottongen_reftransV1_0097844, g.barbadense_cottongen_reftransV1_0097844 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: A0A0D2VA57_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G067000 PE=4 SV=1) HSP 1 Score: 805.053 bits (2078), Expect = 0.000e+0 Identity = 408/413 (98.79%), Postives = 409/413 (99.03%), Query Frame = 2 Query: 221 VLQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 VLQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLV IYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKI GLVPENG TVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGIE+ETDRDEDIELVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVL MKAKEQSWPQTSWGVLNLGLVK Sbjct: 20 VLQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVHIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIGGLVPENGLTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGIEVETDRDEDIELVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLLMKAKEQSWPQTSWGVLNLGLVK 432
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: A0A061E1V8_THECC (E3 ubiquitin-protein ligase RNF25 OS=Theobroma cacao GN=TCM_007657 PE=4 SV=1) HSP 1 Score: 713.761 bits (1841), Expect = 0.000e+0 Identity = 356/412 (86.41%), Postives = 390/412 (94.66%), Query Frame = 2 Query: 224 LQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 L++LL SSRPFLRGEL+ VDKNLP+LVAVLRSVGAGECWHKHGSFL+HLVD+YRILKIWKAQD VCLCGLFHSAYSN+YVNLAIFDPSTGR+VVRGHVG+AAERLIHLFC+VPRQPLIHDDLLFKY+DSE+VEHL SE+SLKNAKEKG+FNE+E WR K+RGL+PENG VKHIKTGEDVLVSRR++AIFL+MT+ADFSDQL+GFQDVLFENFDGRLEF GNN V WPGNGKPGLWLNS SRMGAIYSLI+REEEIFVE+RKR G+ +ET+RDEDIELVVPPVFE+C+K+LGAKEQIEARDLYWEAVCDDSKGGQERAE LLLGSIEKN FVGEPHVVLAQVYLTKGRFEEAEKEAEKGL LML+WSSPWDKRMSW+GWIAW RVL MKAKE+SWPQTSWG+LNLGLVK Sbjct: 155 LRSLLASSRPFLRGELESVDKNLPSLVAVLRSVGAGECWHKHGSFLDHLVDVYRILKIWKAQDPVCLCGLFHSAYSNAYVNLAIFDPSTGREVVRGHVGEAAERLIHLFCIVPRQPLIHDDLLFKYSDSELVEHLKLSEISLKNAKEKGLFNEEEVWRKKLRGLLPENGIVVKHIKTGEDVLVSRRIVAIFLLMTIADFSDQLFGFQDVLFENFDGRLEFSGNNYVGFWPGNGKPGLWLNSASRMGAIYSLIVREEEIFVERRKRTGGVGVETERDEDIELVVPPVFENCTKILGAKEQIEARDLYWEAVCDDSKGGQERAEALLLGSIEKNSFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLTLMLEWSSPWDKRMSWDGWIAWARVLLMKAKEKSWPQTSWGILNLGLVK 566
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: A0A067L8M7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24468 PE=4 SV=1) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 320/412 (77.67%), Postives = 367/412 (89.08%), Query Frame = 2 Query: 224 LQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 LQ LL S+RPFLRGEL+ VD+NLP LV+VLRSVGAGECWHKHGSFL+HLVDIYRILKIWKA D VCLCGLFHSAYSNSYVNLAIFDP+TGRDVVR HVG+AAE+LIHLFC+VPRQPLIHDDLLFKY+DSE+VEHL SE+SL+NAKEKG+FN +E WR KI L+P G TVKHIKTGEDVLV+RRV A+FLMMTMADFSDQL+GFQD LF+N DGRLEF GNN ALWPG+GKPGLW+NSISRMGAIYSL+ REEEI+VE+RKR G++I+ +RDE+IELVVPPVFE C+K+L A +QI ARDLYWE VCD S+ G ++ EELLL +EKNPFVGEPHV+L Q+YL KGRFEEAE++AE+GL+LML+W S WDKR SWEGWIAW RVL MKAKE+SWPQTSWG+LNLGLV+ Sbjct: 9 LQTLLASTRPFLRGELESVDENLPALVSVLRSVGAGECWHKHGSFLDHLVDIYRILKIWKAPDCVCLCGLFHSAYSNSYVNLAIFDPNTGRDVVRAHVGEAAEKLIHLFCIVPRQPLIHDDLLFKYSDSELVEHLKLSELSLRNAKEKGLFNGEEPWRKKINSLLPAKGITVKHIKTGEDVLVTRRVAAVFLMMTMADFSDQLFGFQDSLFDNIDGRLEFTGNNFTALWPGDGKPGLWVNSISRMGAIYSLLQREEEIYVEERKRGGGVKIDKERDEEIELVVPPVFERCTKILDANDQIVARDLYWEGVCDMSRRGVDKVEELLLSCVEKNPFVGEPHVLLGQIYLGKGRFEEAERQAERGLMLMLEWGSTWDKRTSWEGWIAWARVLLMKAKEKSWPQTSWGILNLGLVR 420
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: B9HG84_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s15300g PE=4 SV=1) HSP 1 Score: 658.292 bits (1697), Expect = 0.000e+0 Identity = 326/412 (79.13%), Postives = 378/412 (91.75%), Query Frame = 2 Query: 224 LQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 LQ LL S+RPFLRGEL+ +DKNLP+L++VLRSVGAGECWHKHGSFL+HLV+IYRILKIWKA DSVCLCGLFHSAYSNSYVNLAIFDP+TGRDVVR HVG+AAERLIHLFC+VPRQ LIHDDLLFKY+D E+VEHL ASE+SL+NA EKG+FN +E+WR K+ L+P +G TVKHIK+GEDVLV+RR++ +FL+MTMADFSDQL+GFQD+LFENFDGRLEF+GNN ALWPG+GKPGLW+NSISRMGAIYSLI+REEEIF+E+RKR G E++ +RDEDIELV+ PVFE+C++VL A+EQ+ ARDLYWEAVCD SKGG ERAEELL+ SIEKNPFVGEPHVVL Q YLTKGRFEEAEKEAE+G+ L+L+W SPWDKRMSWEGWIAW RVL MKAKE+SWPQTSWG+LNLGLV+ Sbjct: 19 LQTLLASARPFLRGELESIDKNLPSLISVLRSVGAGECWHKHGSFLDHLVEIYRILKIWKAPDSVCLCGLFHSAYSNSYVNLAIFDPNTGRDVVRNHVGEAAERLIHLFCIVPRQSLIHDDLLFKYSDIELVEHLKASELSLRNAGEKGLFNGEESWRKKLASLLPASGITVKHIKSGEDVLVTRRMVGVFLLMTMADFSDQLFGFQDLLFENFDGRLEFLGNNFGALWPGDGKPGLWINSISRMGAIYSLIVREEEIFIEERKRAGGFEVDRERDEDIELVLAPVFENCTQVLDAREQVVARDLYWEAVCDTSKGGLERAEELLVSSIEKNPFVGEPHVVLGQFYLTKGRFEEAEKEAERGVTLLLEWGSPWDKRMSWEGWIAWARVLLMKAKEKSWPQTSWGILNLGLVR 430
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: V4UC58_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015311mg PE=4 SV=1) HSP 1 Score: 657.907 bits (1696), Expect = 0.000e+0 Identity = 318/418 (76.08%), Postives = 371/418 (88.76%), Query Frame = 2 Query: 224 LQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGXX---XXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQ---ERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 L+ L+ S+RPFLRGEL+ +DKNLP+L+AVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKA D VCLCGLFHSAYSNSYVNLAIFDP+TG+DVVRGHVGDAAE+LIHLFC+VPRQPLIHDDLLFKY+D E+VEHL AS+VSL+NAKEKG+FN +EAWR KI L+P +G TVKHIKTGEDV VSRRV+A F+M+T+ADFSDQL+GFQD LF N DG+LEF GN+ ALWPG+GKPGLW+NS+SRMGAIYSLI REEEIF+++RK +G + +RDEDIEL VPPVFE+C+++L AKEQIE RDLYWEAVC +S G + E+AEELLL IEKNPFVGEPHVVL Q+YL KG+FEEAE++A KGL+L+L+W SPWDKRMSWEGW+AW RVL+MKAKE+SWPQTSWGVLNLGLV+ Sbjct: 13 LETLVASARPFLRGELEAIDKNLPSLIAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAPDCVCLCGLFHSAYSNSYVNLAIFDPNTGQDVVRGHVGDAAEKLIHLFCIVPRQPLIHDDLLFKYSDQELVEHLKASDVSLRNAKEKGLFNAEEAWRKKINELLPADGLTVKHIKTGEDVGVSRRVVATFVMLTIADFSDQLFGFQDFLFNNSDGKLEFAGNSFSALWPGDGKPGLWMNSLSRMGAIYSLIAREEEIFIQERKTSAGAVGVGVNKERDEDIELPVPPVFENCTRILDAKEQIEGRDLYWEAVCGNSDGSKEKLEKAEELLLACIEKNPFVGEPHVVLGQIYLAKGKFEEAERQAGKGLMLLLEWGSPWDKRMSWEGWVAWTRVLYMKAKEKSWPQTSWGVLNLGLVR 430
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: B9RGI5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1454180 PE=4 SV=1) HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0 Identity = 322/412 (78.16%), Postives = 370/412 (89.81%), Query Frame = 2 Query: 224 LQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 LQ LL S+RPFLRGEL+ VDKNLP L++VLRSVGAGECWHKHGSFL+HLVDIYRILKIW A DSVCLCGLFHSAYSNSYVNLAIFDP+TGRDVVRGHVG AAERLIHLFC+VPRQPLIHDDLLF Y+DSE+V+HL SE+SLKNAKEKGVF+ +++WR KI L+P G TVK IKTGEDVLV+RR++A+F+MMTMADFSDQL+ FQD+LF+N DGRLEF GNN +LWPG+GKPGLW+NSISRMGAIY+LI REEEIFVE+R R GIE++ +RDEDIELVVPPVF+ C+++L A++QIEARDLYWEAVCD SK G ++ EELLL IEKNP+VGEPHVVL+QVYLTK RFEEAE+EAEKG+ LML+W SPWDKR SWEGWIAWGRVL MKAKE+SWP TSWG+LNLGLV+ Sbjct: 13 LQTLLASTRPFLRGELESVDKNLPALISVLRSVGAGECWHKHGSFLDHLVDIYRILKIWNASDSVCLCGLFHSAYSNSYVNLAIFDPNTGRDVVRGHVGPAAERLIHLFCIVPRQPLIHDDLLFNYSDSELVQHLLLSEISLKNAKEKGVFDAEDSWRKKINSLLPAAGITVKRIKTGEDVLVTRRIVAVFVMMTMADFSDQLFSFQDLLFDNSDGRLEFSGNNLASLWPGDGKPGLWINSISRMGAIYTLIRREEEIFVEERIRAGGIEVDEERDEDIELVVPPVFDKCTRILDARQQIEARDLYWEAVCDLSKRGLDKVEELLLSCIEKNPYVGEPHVVLSQVYLTKDRFEEAEREAEKGVTLMLEWGSPWDKRTSWEGWIAWGRVLLMKAKEKSWPNTSWGILNLGLVR 424
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: R0HLQ7_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10013769mg PE=4 SV=1) HSP 1 Score: 641.728 bits (1654), Expect = 0.000e+0 Identity = 315/413 (76.27%), Postives = 363/413 (87.89%), Query Frame = 2 Query: 233 LLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGX--XXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDS--KGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 LL+S+RPFLRGEL+ +D LP+L+AVL+SVGAGECWHKHGSFL+HL+DIY+ILK+WKA +SVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVR HVG+AAE LIHLFCVVPRQ LIHDDLLFKY+D E+VEHL SEVSL+NAKEKGVF+ DE WR K+ GLVPENG VKHIKTGE+++VSRRV+A+FL+MTMADFSDQL+GFQD LF N DGRLEF GNN ALWPGNGKPGLW+NS SRMGAIYSLI+REEEI +EQR+RVSG + +RDEDI+LV+PPVF C+KVL AKEQIEAR++YWE V D+ +G ERAEE LLG IEKNPFVGEPHV+L+QVYL K RF+EAE EAEKGL+L+LQW SPWDKRMSWEGWIAW RVL MK+++QSWP SWG+LNLGLV+ Sbjct: 14 LLESARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRDHVGEAAESLIHLFCVVPRQTLIHDDLLFKYSDRELVEHLRCSEVSLRNAKEKGVFDGDEEWRKKMNGLVPENGVAVKHIKTGEEIIVSRRVVAVFLLMTMADFSDQLFGFQDELFCNHDGRLEFRGNNVTALWPGNGKPGLWMNSNSRMGAIYSLIVREEEILMEQRRRVSGSGLVLRKERDEDIDLVLPPVFSFCTKVLDAKEQIEAREMYWEVVSSDTSKEGYLERAEERLLGCIEKNPFVGEPHVLLSQVYLGKKRFKEAEGEAEKGLLLLLQWGSPWDKRMSWEGWIAWVRVLLMKSQDQSWPDVSWGILNLGLVR 426
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: D7LAU9_ARALL (Binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479517 PE=4 SV=1) HSP 1 Score: 637.876 bits (1644), Expect = 0.000e+0 Identity = 316/414 (76.33%), Postives = 362/414 (87.44%), Query Frame = 2 Query: 230 ALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRV--SGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDS--KGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 A+L+S+RPFLRGEL+ +D LP+L+AVL+SVGAGECWHKHGSFL+HL+DIY+ILK+WKA +SVCLCGLFHSAYSNSYVNLAIFDPSTGR+VVR HVG+AAE LIHLFCVVPRQ LIHDDLLFKY+D E+VEHL SEVSL+NAKEKGVF+ DE WR KI GLVPENG VKHIKTGE+++VSRRV+ +FL MTMADFSDQL+GFQD LF N DGRLEF GNN ALWPGNGKPGLWLNS SRMGAIYSLI+REEEI +E+R+R SG E+ +RDEDIELVVPPVF C+KVL AKEQIEAR++YWE V D+ +G ERAEE LLG IEKNPFVGEPHV+L+QVYL K RF EAE+EAEKGL+L+LQW SPWDKRMSWEGWIAW RVL MK+++QSWP SWG+LNLGLV+ Sbjct: 12 AVLESARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAIFDPSTGREVVRDHVGEAAESLIHLFCVVPRQTLIHDDLLFKYSDCELVEHLDCSEVSLRNAKEKGVFDGDEEWRKKINGLVPENGAVVKHIKTGEEIVVSRRVVGVFLFMTMADFSDQLFGFQDELFCNHDGRLEFRGNNVTALWPGNGKPGLWLNSNSRMGAIYSLIVREEEILMEERRRAFGSGFEVRKERDEDIELVVPPVFSFCTKVLDAKEQIEAREMYWEVVSSDTSKEGYLERAEERLLGCIEKNPFVGEPHVLLSQVYLGKKRFNEAEREAEKGLLLLLQWGSPWDKRMSWEGWIAWVRVLLMKSQDQSWPDVSWGILNLGLVR 425
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: Q9LHE6_ARATH (Genomic DNA, chromosome 3, P1 clone: MZE19 OS=Arabidopsis thaliana GN=At3g19990 PE=4 SV=1) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 312/414 (75.36%), Postives = 363/414 (87.68%), Query Frame = 2 Query: 230 ALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRV--SGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDS--KGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 A+L+S+RPFLRGEL+ +D LP+L+AVL+SVGAGECWHKHGSFL+HL+DIY+ILK+WKA +SVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVR HVG+AAE LIHLFCVVPRQ LIHD+LLFKY+D E+VEHL SEVSL+NAKEKG+F+ DE WR KI LVPENG VKHIKTGE+++VSRRV+ +FL+MTMADFSDQL+GFQD LF N DGRLEF GNN ALWPGNGKPGLW+NS SRMGAIYSLI+REEEI +E+R+R SG E+ +RDEDI+LVVPPVF C+KVL AKEQIEAR++YWE V D+ +G ERAEE LLG IEKNPFVGEPHV+L+QVYL K RF+EAE+EAEKGL+L+LQW SPWDKRMSWEGWIAW RVL MK+++QSWP SWG+LNLGLV+ Sbjct: 37 AVLESARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRDHVGEAAESLIHLFCVVPRQTLIHDELLFKYSDCELVEHLDCSEVSLRNAKEKGIFDGDEEWRKKINALVPENGVVVKHIKTGEEIVVSRRVVGVFLLMTMADFSDQLFGFQDELFCNHDGRLEFRGNNVTALWPGNGKPGLWMNSNSRMGAIYSLIVREEEILMEERRRAFGSGFEVRKERDEDIDLVVPPVFSFCTKVLDAKEQIEAREMYWEVVSSDTSKEGYLERAEERLLGCIEKNPFVGEPHVLLSQVYLGKKRFKEAEREAEKGLLLLLQWGSPWDKRMSWEGWIAWVRVLLMKSQDQSWPDVSWGILNLGLVR 450
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: Q501F4_ARATH (At3g19990 OS=Arabidopsis thaliana GN=At3g19990 PE=2 SV=1) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 312/414 (75.36%), Postives = 363/414 (87.68%), Query Frame = 2 Query: 230 ALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRV--SGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDS--KGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 A+L+S+RPFLRGEL+ +D LP+L+AVL+SVGAGECWHKHGSFL+HL+DIY+ILK+WKA +SVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVR HVG+AAE LIHLFCVVPRQ LIHD+LLFKY+D E+VEHL SEVSL+NAKEKG+F+ DE WR KI LVPENG VKHIKTGE+++VSRRV+ +FL+MTMADFSDQL+GFQD LF N DGRLEF GNN ALWPGNGKPGLW+NS SRMGAIYSLI+REEEI +E+R+R SG E+ +RDEDI+LVVPPVF C+KVL AKEQIEAR++YWE V D+ +G ERAEE LLG IEKNPFVGEPHV+L+QVYL K RF+EAE+EAEKGL+L+LQW SPWDKRMSWEGWIAW RVL MK+++QSWP SWG+LNLGLV+ Sbjct: 12 AVLESARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRDHVGEAAESLIHLFCVVPRQTLIHDELLFKYSDCELVEHLDCSEVSLRNAKEKGIFDGDEEWRKKINALVPENGVVVKHIKTGEEIVVSRRVVGVFLLMTMADFSDQLFGFQDELFCNHDGRLEFRGNNVTALWPGNGKPGLWMNSNSRMGAIYSLIVREEEILMEERRRAFGSGFEVRKERDEDIDLVVPPVFSFCTKVLDAKEQIEAREMYWEVVSSDTSKEGYLERAEERLLGCIEKNPFVGEPHVLLSQVYLGKKRFKEAEREAEKGLLLLLQWGSPWDKRMSWEGWIAWVRVLLMKSQDQSWPDVSWGILNLGLVR 425 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097844 ID=g.barbadense_cottongen_reftransV1_0097844; Name=g.barbadense_cottongen_reftransV1_0097844; organism=Gossypium barbadense; type=contig; length=1881bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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