g.barbadense_cottongen_reftransV1_0097648, g.barbadense_cottongen_reftransV1_0097648 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097648
Unique Nameg.barbadense_cottongen_reftransV1_0097648
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2826
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Dt02chromosomeg.barbadense_cottongen_reftransV1_0097648:1..2826 .
Dt02:60968145..60986227 -
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy Swiss-Prot
Match: MAPT_ARATH (Microtubule-associated protein TORTIFOLIA1 OS=Arabidopsis thaliana GN=TOR1 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 2.085e-27
Identity = 105/304 (34.54%), Postives = 166/304 (54.61%), Query Frame = -1
Query: 1843 TMSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKP------------PFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPG 2718
            T S  N    +  Q + +LKQ++ T ++KLADRDT  +A  +LE   ++LT +++  FLNCL+++ S  K  V+++C+ LL+ +   H +  + HL+K+I+ + +RL+D DS VR AC +   A+S    K                +  KPL E +  EQ+   Q GA+MC++  +E+A  P     +K+ P++ KL+ + SF AK A    + S  S  GA +   L+  +    + L S DW TRKAAA+ L  +A     L  E   + +T L   RFDK+K VRE++  +L LWK + G
Sbjct:   24 TRSCSNSGSLTSFQAMVELKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVKKECLHLLSYVCSLHCDSTAAHLTKIIAQIVKRLKDSDSGVRDACRDTIGALSGIYLKGKEEGTNTGSASLAVGLFVKPLFEAM-GEQNKVVQSGASMCMARMVESAASPPVTSFQKLCPRICKLLSNSSFLAK-ASLLPVVSSLSQVGAIAPQSLESLLESIHDCLGSTDWVTRKAAAETLTALASHSSGLIKEKTDSTITVLETCRFDKIKPVRESVTEALQLWKKISG 325          

HSP 2 Score: 67.3958 bits (163), Expect = 4.999e-10
Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = -1
Query:  952 IREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKF-WRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAG 1347
            I+ QL Q+E QQ+NL+N+LQ+FIG S   + +LE RV GLE  +++++ DL+ISSGR  N+ +   K      A + + K+  R    R S +     GRM         ++ D   + + P ++     QAG
Sbjct:  510 IQRQLLQLERQQTNLMNMLQEFIGGSHDSMVTLEGRVRGLERIVEDMARDLSISSGRRANLTAGFGKYNSF--ANYPTGKYNGRAPGERGSQTDGAMRGRM---------WNSDMADDWFIPPHAASRNGQAG 631          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy Swiss-Prot
Match: SP2L_ARATH (Microtubule-associated protein SPIRAL2-like OS=Arabidopsis thaliana GN=SP2L PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.679e-26
Identity = 96/292 (32.88%), Postives = 165/292 (56.51%), Query Frame = -1
Query: 1834 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNL--TVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPP------------FSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCE 2667
            +LKQR+ T L++L DRDT  +A  +LE I  ++  + + +   L+CL ++ S  K+PV+R+ + LL+ +  S+ ++    L+K+IS + +RL+D D+ VR AC +A  ++S+   K                + +KPL E +  EQ+ + Q GAA+C+   I++A +P     +K+ P++ KL+ S ++  K A    +    S  GA +   L+  +    E L   +W TRKAAAD L  +A+    L A+   + +TAL   RFDK+K VRE+++ +L++WK++ G  E
Sbjct:   36 ELKQRILTSLSRLGDRDTYQIAVDDLEKIVVSVPDSPEILPVLLHCLFDSSSDLKAPVKRESIRLLSFLCLSYTDLSFSQLAKIISHIVKRLKDADNGVRDACRDAIGSLSAQFLKEKEVENGNYVGSSLVGLFAKPLFEAM-AEQNKSLQSGAAICMGKMIDSATEPPVAAFQKLCPRISKLLNSPNYITK-ASLLPVVGSLSQVGAIAPQSLESLLHSIHECLGCTNWVTRKAAADVLISLAVHSSSLVADKTDSTLTALEACRFDKIKPVRESLSEALNVWKNIAGKGE 325          

HSP 2 Score: 57.3806 bits (137), Expect = 5.366e-7
Identity = 25/56 (44.64%), Postives = 41/56 (73.21%), Query Frame = -1
Query: 1180 IREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSG 1347
            ++ QL  +E QQ++++N+LQ F+G S  G+ SLE RV GLE  ++E+S +++I SG
Sbjct:  503 LQRQLLHLERQQTHIMNMLQDFMGGSHDGMISLENRVRGLERIVEEMSREMSIQSG 558          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A0B0NV08_GOSAR (Microtubule-associated TORTIFOLIA1-like protein OS=Gossypium arboreum GN=F383_23547 PE=4 SV=1)

HSP 1 Score: 1066.6 bits (2757), Expect = 0.000e+0
Identity = 637/646 (98.61%), Postives = 642/646 (99.38%), Query Frame = -1
Query:  778 MSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTRRLDRSKSSDWKIETVQPKSLFSEASGDYNIKRSVSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSRF 2715
            MSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTLALASAELESIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDP+TEQLKKVLPKLGKLVRSESFKAKAAVFGVIGSVASVGGAGSKGVLDWFV CAVESLSSEDWGTRKAAADALGKVAMAEKELAAEYKAACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEVSTTSQSDSSSIDNGSVGCFTSVSKGMNDVGFRTPQSKKVVPTSRSPPSDASAASTAKKETSLKSNNSNSNTRRLDRSKSSDWKIETVQPKSLFSEASG+YNIKRSVSFGKAHDEKVQKFGGLRS+SQVLPFHDEENLDVTDKNAAL VDE+PKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDN CCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSS +
Sbjct:    1 MSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTLALASAELESIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPQTEQLKKVLPKLGKLVRSESFKAKAAVFGVIGSVASVGGAGSKGVLDWFVPCAVESLSSEDWGTRKAAADALGKVAMAEKELAAEYKAACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEVSTTSQSDSSSIDNGSVGCFTSVSKGMNDVGFRTPQSKKVVPTSRSPPSDASAASTAKKETSLKSNNSNSNTRRLDRSKSSDWKIETVQPKSLFSEASGNYNIKRSVSFGKAHDEKVQKFGGLRSRSQVLPFHDEENLDVTDKNAALDVDESPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNTCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSSW 646          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A0D2NF68_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G188000 PE=4 SV=1)

HSP 1 Score: 1060.06 bits (2740), Expect = 0.000e+0
Identity = 632/646 (97.83%), Postives = 637/646 (98.61%), Query Frame = -1
Query:  778 MSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTRRLDRSKSSDWKIETVQPKSLFSEASGDYNIKRSVSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSRF 2715
            MSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTLALASAELESIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRD DSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQLKKVLPKLGKLVRSESFKAKAAVFGVIGSVASVGGAGSKGVLDWFV CAVESL SEDWGTRKAAA+ALGKVAMAEKELAAEYKAACVT LGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEVSTTSQSDSSSIDNGSVGCFTSV+K MNDVGFRTPQSKKVVPTSRSPPSDASAASTAKKET L+SNNSNSNTRRLDRSKSSDWKIE VQPKSLFSEASGDYNIKRSVSFGKAHDEKVQKFGGLRSQS+VLPFHDEENLDVTDKNAAL VDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNL+DKDSGGEMYKPAYSRGYQRQ GSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSRF
Sbjct:    1 MSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTLALASAELESIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDHDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQLKKVLPKLGKLVRSESFKAKAAVFGVIGSVASVGGAGSKGVLDWFVPCAVESLGSEDWGTRKAAAEALGKVAMAEKELAAEYKAACVTTLGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEVSTTSQSDSSSIDNGSVGCFTSVTKSMNDVGFRTPQSKKVVPTSRSPPSDASAASTAKKETPLESNNSNSNTRRLDRSKSSDWKIEPVQPKSLFSEASGDYNIKRSVSFGKAHDEKVQKFGGLRSQSRVLPFHDEENLDVTDKNAALDVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLHDKDSGGEMYKPAYSRGYQRQGGSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSRF 646          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A0D2PVD1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G188000 PE=4 SV=1)

HSP 1 Score: 1057.36 bits (2733), Expect = 0.000e+0
Identity = 631/645 (97.83%), Postives = 636/645 (98.60%), Query Frame = -1
Query:  781 MSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTRRLDRSKSSDWKIETVQPKSLFSEASGDYNIKRSVSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSR 2715
            MSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTLALASAELESIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRD DSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQLKKVLPKLGKLVRSESFKAKAAVFGVIGSVASVGGAGSKGVLDWFV CAVESL SEDWGTRKAAA+ALGKVAMAEKELAAEYKAACVT LGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEVSTTSQSDSSSIDNGSVGCFTSV+K MNDVGFRTPQSKKVVPTSRSPPSDASAASTAKKET L+SNNSNSNTRRLDRSKSSDWKIE VQPKSLFSEASGDYNIKRSVSFGKAHDEKVQKFGGLRSQS+VLPFHDEENLDVTDKNAAL VDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNL+DKDSGGEMYKPAYSRGYQRQ GSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSR
Sbjct:    1 MSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTLALASAELESIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDHDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQLKKVLPKLGKLVRSESFKAKAAVFGVIGSVASVGGAGSKGVLDWFVPCAVESLGSEDWGTRKAAAEALGKVAMAEKELAAEYKAACVTTLGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEVSTTSQSDSSSIDNGSVGCFTSVTKSMNDVGFRTPQSKKVVPTSRSPPSDASAASTAKKETPLESNNSNSNTRRLDRSKSSDWKIEPVQPKSLFSEASGDYNIKRSVSFGKAHDEKVQKFGGLRSQSRVLPFHDEENLDVTDKNAALDVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLHDKDSGGEMYKPAYSRGYQRQGGSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSR 645          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A061E5P4_THECC (ARM repeat superfamily protein, putative isoform 6 OS=Theobroma cacao GN=TCM_010125 PE=4 SV=1)

HSP 1 Score: 828.55 bits (2139), Expect = 0.000e+0
Identity = 523/660 (79.24%), Postives = 560/660 (84.85%), Query Frame = -1
Query:  778 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTR---RLDRSKSSDWKIETVQPKSLFSEASGDYNIKRS----------------------VSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFS-----KNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSRF 2667
            DLKQRV TCLNKL+DRDTLALASAELESIARNLT+DSISPFLNC+HNTDSS+KSPVRRQCV LL L+S SHGN LSPHLSKM+ST+ARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCL+AAIE+APDPETEQL+KVLPKLGKLVR+ESFKAKAAVFGVIGSVASVGGA SKGVL W V CAVESLSSEDW TRKAAA+ALGKVA+AEKELA EYKAACVTALGNKRFDKVKIVRETMNRSLDLWK+VPGVCEE S +SQS+SSSIDNGS+GCF SV+K  ND G RTPQSKK VP SRSPPSDAS   TAKKET LKSNN N NT    RLDR+K SDWKIE  +PK LFS+AS D NI+ S                      V FGK  DEKVQKFGG+RS+S+V+PFHDEENLDV D NAA+ VDENP+DIE+L LI EQLAQIEDQQSNLLNLLQKFIGSSQ+GINSLETRVNGLEMALDEISYDLA+SSGRI NMDS DN CCKLPGAEFLSPKFWRKTE RFS SRL SSGR+LSLNAVHN  DKDS  E YKP  S+ Y RQ+  GFVMNP+ DA SDIR+N GF      KNTIQNAER QVGNAS  DGTS V CTAP NLSS+ 
Sbjct:   21 DLKQRVITCLNKLSDRDTLALASAELESIARNLTLDSISPFLNCIHNTDSSSKSPVRRQCVSLLALLSHSHGNALSPHLSKMVSTVARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLAAAIESAPDPETEQLRKVLPKLGKLVRNESFKAKAAVFGVIGSVASVGGARSKGVLGWLVPCAVESLSSEDWATRKAAAEALGKVAVAEKELATEYKAACVTALGNKRFDKVKIVRETMNRSLDLWKEVPGVCEEASASSQSESSSIDNGSIGCFPSVTKSANDAGLRTPQSKKAVPVSRSPPSDASPVPTAKKETPLKSNNRNRNTSIFGRLDRTKPSDWKIEIAEPKFLFSKASCDDNIEESDLGVSRSRENGDSRNSRLETKRVLFGKVRDEKVQKFGGMRSRSRVVPFHDEENLDVDDDNAAVEVDENPRDIENLSLIHEQLAQIEDQQSNLLNLLQKFIGSSQNGINSLETRVNGLEMALDEISYDLAVSSGRIPNMDSADNTCCKLPGAEFLSPKFWRKTEGRFSISRLSSSGRVLSLNAVHNTPDKDSCAESYKPEVSQRYLRQSRGGFVMNPLADACSDIRENSGFYSNRILKNTIQNAERVQVGNASGPDGTSSVPCTAPMNLSSKL 680          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A061E7F1_THECC (ARM repeat superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_010125 PE=4 SV=1)

HSP 1 Score: 828.55 bits (2139), Expect = 0.000e+0
Identity = 524/659 (79.51%), Postives = 560/659 (84.98%), Query Frame = -1
Query:  781 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTR---RLDRSKSSDWKIETVQPKSLFSEASGDYNIKRS----------------------VSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFS-----KNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSR 2667
            DLKQRV TCLNKL+DRDTLALASAELESIARNLT+DSISPFLNC+HNTDSS+KSPVRRQCV LL L+S SHGN LSPHLSKM+ST+ARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCL+AAIE+APDPETEQL+KVLPKLGKLVR+ESFKAKAAVFGVIGSVASVGGA SKGVL W V CAVESLSSEDW TRKAAA+ALGKVA+AEKELA EYKAACVTALGNKRFDKVKIVRETMNRSLDLWK+VPGVCEE S +SQS+SSSIDNGS+GCF SV+K  ND G RTPQSKK VP SRSPPSDAS   TAKKET LKSNN N NT    RLDR+K SDWKIE  +PK LFS+AS D NI+ S                      V FGK  DEKVQKFGG+RS+S+V+PFHDEENLDV D NAA+ VDENP+DIE+L LI EQLAQIEDQQSNLLNLLQKFIGSSQ+GINSLETRVNGLEMALDEISYDLA+SSGRI NMDS DN CCKLPGAEFLSPKFWRKTE RFS SRL SSGR+LSLNAVHN  DKDS  E YKP  S+ Y RQ+  GFVMNP+ DA SDIR+N GF      KNTIQNAER QVGNAS  DGTS V CTAP NLSSR
Sbjct:   21 DLKQRVITCLNKLSDRDTLALASAELESIARNLTLDSISPFLNCIHNTDSSSKSPVRRQCVSLLALLSHSHGNALSPHLSKMVSTVARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLAAAIESAPDPETEQLRKVLPKLGKLVRNESFKAKAAVFGVIGSVASVGGARSKGVLGWLVPCAVESLSSEDWATRKAAAEALGKVAVAEKELATEYKAACVTALGNKRFDKVKIVRETMNRSLDLWKEVPGVCEEASASSQSESSSIDNGSIGCFPSVTKSANDAGLRTPQSKKAVPVSRSPPSDASPVPTAKKETPLKSNNRNRNTSIFGRLDRTKPSDWKIEIAEPKFLFSKASCDDNIEESDLGVSRSRENGDSRNSRLETKRVLFGKVRDEKVQKFGGMRSRSRVVPFHDEENLDVDDDNAAVEVDENPRDIENLSLIHEQLAQIEDQQSNLLNLLQKFIGSSQNGINSLETRVNGLEMALDEISYDLAVSSGRIPNMDSADNTCCKLPGAEFLSPKFWRKTEGRFSISRLSSSGRVLSLNAVHNTPDKDSCAESYKPEVSQRYLRQSRGGFVMNPLADACSDIRENSGFYSNRILKNTIQNAERVQVGNASGPDGTSSVPCTAPMNLSSR 679          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A061E6N5_THECC (ARM repeat superfamily protein, putative isoform 3 OS=Theobroma cacao GN=TCM_010125 PE=4 SV=1)

HSP 1 Score: 828.165 bits (2138), Expect = 0.000e+0
Identity = 523/658 (79.48%), Postives = 559/658 (84.95%), Query Frame = -1
Query:  784 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTR---RLDRSKSSDWKIETVQPKSLFSEASGDYNIKRS----------------------VSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFS-----KNTIQNAERFQVGNASASDGTSLVSCTAPTNLSS 2667
            DLKQRV TCLNKL+DRDTLALASAELESIARNLT+DSISPFLNC+HNTDSS+KSPVRRQCV LL L+S SHGN LSPHLSKM+ST+ARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCL+AAIE+APDPETEQL+KVLPKLGKLVR+ESFKAKAAVFGVIGSVASVGGA SKGVL W V CAVESLSSEDW TRKAAA+ALGKVA+AEKELA EYKAACVTALGNKRFDKVKIVRETMNRSLDLWK+VPGVCEE S +SQS+SSSIDNGS+GCF SV+K  ND G RTPQSKK VP SRSPPSDAS   TAKKET LKSNN N NT    RLDR+K SDWKIE  +PK LFS+AS D NI+ S                      V FGK  DEKVQKFGG+RS+S+V+PFHDEENLDV D NAA+ VDENP+DIE+L LI EQLAQIEDQQSNLLNLLQKFIGSSQ+GINSLETRVNGLEMALDEISYDLA+SSGRI NMDS DN CCKLPGAEFLSPKFWRKTE RFS SRL SSGR+LSLNAVHN  DKDS  E YKP  S+ Y RQ+  GFVMNP+ DA SDIR+N GF      KNTIQNAER QVGNAS  DGTS V CTAP NLSS
Sbjct:   21 DLKQRVITCLNKLSDRDTLALASAELESIARNLTLDSISPFLNCIHNTDSSSKSPVRRQCVSLLALLSHSHGNALSPHLSKMVSTVARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLAAAIESAPDPETEQLRKVLPKLGKLVRNESFKAKAAVFGVIGSVASVGGARSKGVLGWLVPCAVESLSSEDWATRKAAAEALGKVAVAEKELATEYKAACVTALGNKRFDKVKIVRETMNRSLDLWKEVPGVCEEASASSQSESSSIDNGSIGCFPSVTKSANDAGLRTPQSKKAVPVSRSPPSDASPVPTAKKETPLKSNNRNRNTSIFGRLDRTKPSDWKIEIAEPKFLFSKASCDDNIEESDLGVSRSRENGDSRNSRLETKRVLFGKVRDEKVQKFGGMRSRSRVVPFHDEENLDVDDDNAAVEVDENPRDIENLSLIHEQLAQIEDQQSNLLNLLQKFIGSSQNGINSLETRVNGLEMALDEISYDLAVSSGRIPNMDSADNTCCKLPGAEFLSPKFWRKTEGRFSISRLSSSGRVLSLNAVHNTPDKDSCAESYKPEVSQRYLRQSRGGFVMNPLADACSDIRENSGFYSNRILKNTIQNAERVQVGNASGPDGTSSVPCTAPMNLSS 678          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A061EDE4_THECC (ARM repeat superfamily protein, putative isoform 4 OS=Theobroma cacao GN=TCM_010125 PE=4 SV=1)

HSP 1 Score: 827.009 bits (2135), Expect = 0.000e+0
Identity = 523/658 (79.48%), Postives = 559/658 (84.95%), Query Frame = -1
Query:  784 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTR---RLDRSKSSDWKIETVQPKSLFSEASGDYNIKRS----------------------VSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFS-----KNTIQNAERFQVGNASASDGTSLVSCTAPTNLSS 2667
            DLKQRV TCLNKL+DRDTLALASAELESIARNLT+DSISPFLNC+HNTDSS+KSPVRRQCV LL L+S SHGN LSPHLSKM+ST+ARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCL+AAIE+APDPETEQL+KVLPKLGKLVR+ESFKAKAAVFGVIGSVASVGGA SKGVL W V CAVESLSSEDW TRKAAA+ALGKVA+AEKELA EYKAACVTALGNKRFDKVKIVRETMNRSLDLWK+VPGVCEE S +SQS+SSSIDNGS+GCF SV+K  ND G RTPQSKK VP SRSPPSDAS   TAKKET LKSNN N NT    RLDR+K SDWKIE  +PK LFS+AS D NI+ S                      V FGK  DEKVQKFGG+RS+S+V+PFHDEENLDV D NAA+ VDENP+DIE+L LI EQLAQIEDQQSNLLNLLQKFIGSSQ+GINSLETRVNGLEMALDEISYDLA+SSGRI NMDS DN CCKLPGAEFLSPKFWRKTE RFS SRL SSGR+LSLNAVHN  DKDS  E YKP  S+ Y RQ+  GFVMNP+ DA SDIR+N GF      KNTIQNAER QVGNAS  DGTS V CTAP NLSS
Sbjct:   21 DLKQRVITCLNKLSDRDTLALASAELESIARNLTLDSISPFLNCIHNTDSSSKSPVRRQCVSLLALLSHSHGNALSPHLSKMVSTVARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLAAAIESAPDPETEQLRKVLPKLGKLVRNESFKAKAAVFGVIGSVASVGGARSKGVLGWLVPCAVESLSSEDWATRKAAAEALGKVAVAEKELATEYKAACVTALGNKRFDKVKIVRETMNRSLDLWKEVPGVCEEASASSQSESSSIDNGSIGCFPSVTKSANDAGLRTPQSKKAVPVSRSPPSDASPVPTAKKETPLKSNNRNRNTSIFGRLDRTKPSDWKIEIAEPKFLFSKASCDDNIEESDLGVSRSRENGDSRNSRLETKRVLFGKVRDEKVQKFGGMRSRSRVVPFHDEENLDVDDDNAAVEVDENPRDIENLSLIHEQLAQIEDQQSNLLNLLQKFIGSSQNGINSLETRVNGLEMALDEISYDLAVSSGRIPNMDSADNTCCKLPGAEFLSPKFWRKTEGRFSISRLSSSGRVLSLNAVHNTPDKDSCAESYKPEVSQRYLRQSRGGFVMNPLADACSDIRENSGFYSNRILKNTIQNAERVQVGNASGPDGTSSVPCTAPMNLSS 678          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A061E5P1_THECC (ARM repeat superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_010125 PE=4 SV=1)

HSP 1 Score: 827.009 bits (2135), Expect = 0.000e+0
Identity = 523/658 (79.48%), Postives = 559/658 (84.95%), Query Frame = -1
Query:  784 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTR---RLDRSKSSDWKIETVQPKSLFSEASGDYNIKRS----------------------VSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFS-----KNTIQNAERFQVGNASASDGTSLVSCTAPTNLSS 2667
            DLKQRV TCLNKL+DRDTLALASAELESIARNLT+DSISPFLNC+HNTDSS+KSPVRRQCV LL L+S SHGN LSPHLSKM+ST+ARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCL+AAIE+APDPETEQL+KVLPKLGKLVR+ESFKAKAAVFGVIGSVASVGGA SKGVL W V CAVESLSSEDW TRKAAA+ALGKVA+AEKELA EYKAACVTALGNKRFDKVKIVRETMNRSLDLWK+VPGVCEE S +SQS+SSSIDNGS+GCF SV+K  ND G RTPQSKK VP SRSPPSDAS   TAKKET LKSNN N NT    RLDR+K SDWKIE  +PK LFS+AS D NI+ S                      V FGK  DEKVQKFGG+RS+S+V+PFHDEENLDV D NAA+ VDENP+DIE+L LI EQLAQIEDQQSNLLNLLQKFIGSSQ+GINSLETRVNGLEMALDEISYDLA+SSGRI NMDS DN CCKLPGAEFLSPKFWRKTE RFS SRL SSGR+LSLNAVHN  DKDS  E YKP  S+ Y RQ+  GFVMNP+ DA SDIR+N GF      KNTIQNAER QVGNAS  DGTS V CTAP NLSS
Sbjct:   21 DLKQRVITCLNKLSDRDTLALASAELESIARNLTLDSISPFLNCIHNTDSSSKSPVRRQCVSLLALLSHSHGNALSPHLSKMVSTVARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLAAAIESAPDPETEQLRKVLPKLGKLVRNESFKAKAAVFGVIGSVASVGGARSKGVLGWLVPCAVESLSSEDWATRKAAAEALGKVAVAEKELATEYKAACVTALGNKRFDKVKIVRETMNRSLDLWKEVPGVCEEASASSQSESSSIDNGSIGCFPSVTKSANDAGLRTPQSKKAVPVSRSPPSDASPVPTAKKETPLKSNNRNRNTSIFGRLDRTKPSDWKIEIAEPKFLFSKASCDDNIEESDLGVSRSRENGDSRNSRLETKRVLFGKVRDEKVQKFGGMRSRSRVVPFHDEENLDVDDDNAAVEVDENPRDIENLSLIHEQLAQIEDQQSNLLNLLQKFIGSSQNGINSLETRVNGLEMALDEISYDLAVSSGRIPNMDSADNTCCKLPGAEFLSPKFWRKTEGRFSISRLSSSGRVLSLNAVHNTPDKDSCAESYKPEVSQRYLRQSRGGFVMNPLADACSDIRENSGFYSNRILKNTIQNAERVQVGNASGPDGTSSVPCTAPMNLSS 678          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A061E5K1_THECC (ARM repeat superfamily protein, putative isoform 5 OS=Theobroma cacao GN=TCM_010125 PE=4 SV=1)

HSP 1 Score: 823.928 bits (2127), Expect = 0.000e+0
Identity = 521/656 (79.42%), Postives = 557/656 (84.91%), Query Frame = -1
Query:  790 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTR---RLDRSKSSDWKIETVQPKSLFSEASGDYNIKRS----------------------VSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFS-----KNTIQNAERFQVGNASASDGTSLVSCTAPTNL 2667
            DLKQRV TCLNKL+DRDTLALASAELESIARNLT+DSISPFLNC+HNTDSS+KSPVRRQCV LL L+S SHGN LSPHLSKM+ST+ARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCL+AAIE+APDPETEQL+KVLPKLGKLVR+ESFKAKAAVFGVIGSVASVGGA SKGVL W V CAVESLSSEDW TRKAAA+ALGKVA+AEKELA EYKAACVTALGNKRFDKVKIVRETMNRSLDLWK+VPGVCEE S +SQS+SSSIDNGS+GCF SV+K  ND G RTPQSKK VP SRSPPSDAS   TAKKET LKSNN N NT    RLDR+K SDWKIE  +PK LFS+AS D NI+ S                      V FGK  DEKVQKFGG+RS+S+V+PFHDEENLDV D NAA+ VDENP+DIE+L LI EQLAQIEDQQSNLLNLLQKFIGSSQ+GINSLETRVNGLEMALDEISYDLA+SSGRI NMDS DN CCKLPGAEFLSPKFWRKTE RFS SRL SSGR+LSLNAVHN  DKDS  E YKP  S+ Y RQ+  GFVMNP+ DA SDIR+N GF      KNTIQNAER QVGNAS  DGTS V CTAP NL
Sbjct:   21 DLKQRVITCLNKLSDRDTLALASAELESIARNLTLDSISPFLNCIHNTDSSSKSPVRRQCVSLLALLSHSHGNALSPHLSKMVSTVARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLAAAIESAPDPETEQLRKVLPKLGKLVRNESFKAKAAVFGVIGSVASVGGARSKGVLGWLVPCAVESLSSEDWATRKAAAEALGKVAVAEKELATEYKAACVTALGNKRFDKVKIVRETMNRSLDLWKEVPGVCEEASASSQSESSSIDNGSIGCFPSVTKSANDAGLRTPQSKKAVPVSRSPPSDASPVPTAKKETPLKSNNRNRNTSIFGRLDRTKPSDWKIEIAEPKFLFSKASCDDNIEESDLGVSRSRENGDSRNSRLETKRVLFGKVRDEKVQKFGGMRSRSRVVPFHDEENLDVDDDNAAVEVDENPRDIENLSLIHEQLAQIEDQQSNLLNLLQKFIGSSQNGINSLETRVNGLEMALDEISYDLAVSSGRIPNMDSADNTCCKLPGAEFLSPKFWRKTEGRFSISRLSSSGRVLSLNAVHNTPDKDSCAESYKPEVSQRYLRQSRGGFVMNPLADACSDIRENSGFYSNRILKNTIQNAERVQVGNASGPDGTSSVPCTAPMNL 676          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A0D2QT46_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G345700 PE=4 SV=1)

HSP 1 Score: 761.525 bits (1965), Expect = 0.000e+0
Identity = 498/669 (74.44%), Postives = 550/669 (82.21%), Query Frame = -1
Query:  799 MSSKNRSPQSP-QQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCE-EXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNT---RRLDRSKSSDWKIETVQP-KSLFSEA-------------------SGDYNIK-RSVSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPG----FSKNTIQNAERFQVGNASASDGTSLVSCTAP 2715
            MS KNRSP +  Q Q  DLKQRV+TCLNKLADRDTLA+ASAEL+SIARNLT DSISPFLNCL+ TDSS+KSPVRRQCV LLTL+S+SHGN LSPHLSKM+STL+RRLRDPDSAVRSACVEAT AMSSHITKPPFSVLSKPLIEMLVVEQDVNSQ+GAAMCL+AAI+AAPDPE+EQL+KVLPKLGKLVR+ESFKAKAAVFGVIGSVASVGGAGSKGVLDW V CAV++LSSEDW TRKAAA+ALGKVAMAEKEL AEYK+ACV AL NKRFDKVKIVRET NRSLDLWK+VPGVCE    + S S S    NGS GCF SV+K ++D GFRTPQSKKVVPTSRSPP DAS   TAKKET L+SNN N N     +LDR+K SD K E  +P KSLF +A                   SGD  ++ + + F K  DE VQK+GGL+S S+V+PFHD ENLD  DKNAA+ VDENPK++EDL LIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDL++S+GRI NMDS D +CCKLPG EFLSPKFWRKTE RFSTSRL SSGRMLSLNA HN+ DKDSG E Y PA S+ +Q Q   GF+MNPV D  + I DN G     SKNTIQNAER Q+GNAS  DGT+LV CTAP
Sbjct:    1 MSFKNRSPTTILQPQPQDLKQRVYTCLNKLADRDTLAVASAELDSIARNLTSDSISPFLNCLYGTDSSSKSPVRRQCVCLLTLLSRSHGNALSPHLSKMVSTLSRRLRDPDSAVRSACVEATAAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQVGAAMCLAAAIDAAPDPESEQLRKVLPKLGKLVRNESFKAKAAVFGVIGSVASVGGAGSKGVLDWLVPCAVDALSSEDWATRKAAAEALGKVAMAEKELTAEYKSACVVALENKRFDKVKIVRETFNRSLDLWKEVPGVCEVSAPSQSDSPSVEAGNGSFGCFPSVTKSVDDAGFRTPQSKKVVPTSRSPPLDASTEPTAKKETPLRSNNRNWNISDFSKLDRTKPSDCKTEIAEPRKSLFFKAYDNIKNSDLGVMESREIGDSGDSRLETKRILFAKVCDENVQKYGGLKSGSRVVPFHD-ENLDFDDKNAAVEVDENPKEVEDLSLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLSLSNGRIPNMDSADKRCCKLPGTEFLSPKFWRKTEGRFSTSRLSSSGRMLSLNAAHNIPDKDSGAETYIPAVSQRHQHQGCGGFIMNPVADGCNGITDNSGSSNRLSKNTIQNAERVQLGNASGPDGTTLVRCTAP 668          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
MAPT_ARATH2.085e-2734.54Microtubule-associated protein TORTIFOLIA1 OS=Arab... [more]
SP2L_ARATH3.679e-2632.88Microtubule-associated protein SPIRAL2-like OS=Ara... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0NV08_GOSAR0.000e+098.61Microtubule-associated TORTIFOLIA1-like protein OS... [more]
A0A0D2NF68_GOSRA0.000e+097.83Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2PVD1_GOSRA0.000e+097.83Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061E5P4_THECC0.000e+079.24ARM repeat superfamily protein, putative isoform 6... [more]
A0A061E7F1_THECC0.000e+079.51ARM repeat superfamily protein, putative isoform 2... [more]
A0A061E6N5_THECC0.000e+079.48ARM repeat superfamily protein, putative isoform 3... [more]
A0A061EDE4_THECC0.000e+079.48ARM repeat superfamily protein, putative isoform 4... [more]
A0A061E5P1_THECC0.000e+079.48ARM repeat superfamily protein, putative isoform 1... [more]
A0A061E5K1_THECC0.000e+079.42ARM repeat superfamily protein, putative isoform 5... [more]
A0A0D2QT46_GOSRA0.000e+074.44Uncharacterized protein OS=Gossypium raimondii GN=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 457..477
NoneNo IPR availablePANTHERPTHR31355:SF3ARM REPEAT SUPERFAMILY PROTEIN-RELATEDcoord: 1..605
IPR026003HEAT repeat associated with sister chromatid cohesion proteinPFAMPF12765Cohesin_HEATcoord: 96..120
e-value: 5.8E-5
score: 23.1
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 10..323
e-value: 2.0E-54
score: 184.6
IPR033337MT-associated protein TORTIFOLIA1/SPIRAL2-likePANTHERPTHR31355FAMILY NOT NAMEDcoord: 1..605
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 10..283

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097648 ID=g.barbadense_cottongen_reftransV1_0097648; Name=g.barbadense_cottongen_reftransV1_0097648; organism=Gossypium barbadense; type=contig; length=2826bp
ATCGGTAATATATAAAGATACACTTGCAATAATCCCAAAACAGTGCAAAT
TTCTCCTAAACGCACACCGACCCATTCTAAAATAATCCGTCCTGAAACCA
ATATTAAAAAAATATCTTACCTTTATCAGATGGGTTTCGTAACCTGTCAG
GCTCTTTTTTTGCCATCCCAAGTAATTAGAGTTGCCGATTCACGCTGCAT
AATTGCATTTACATTACTCTACACTTTACAAACTCATCCTTAACTTCAGA
TATTTTACATTATTAACTCTAAATCCGTATTGAATTTTCGTGTCATACAA
TACAACACGAGAAGTAACTACTAGAATGTTGGAACTGTTGTTTCTTTTCT
TTTCTTGGGGGTTCAATTGATGAAAAACTTGATGGCCTAGGATTGAAATT
TTATATGCAGTACACAAGAACTAGTAACAAGAAAAGATAAAAACGAGATG
CACATAGTCTCTCTGTACACGGAAGGGACCTCCCCGCCTCTACTGCAAAC
CCACTCAGTGAGGGGGACAGGTTTCTGTTGGAACACCATATATTCTGTGC
CTGCCTTGCGCGAAAGCCAGCCATTGGCATTTTTCAGTTAATTTACTCAC
GGAATCAAAAAGTAAATCTACTATCTCCTGTAACAACCCAGAATGCTGCA
CCTCATCATTACATGATCTACGATTACATCGTATCATTTCATCTTCAACC
TCCATTCTCCAAGGTGCTTCTCCGCTAGCTTCAGCTGCTTCTTCAAACAC
CCCCAACTTCAATCCAAGTTAAGCTCAAAATCTGCTGCTAAGGTTCGTTG
GAGCTGTACAACTAACCAGGGAAGTCCCATCAGAAGCACTAGCATTGCCA
ACCTGGAACCTCTCAGCATTTTGAATGGTGTTCTTTGAGAACCCTGGATT
ATCTCTTATGTCACTGCCAGCATCACCCACTGGGTTCATAACAAATCCAC
TTCCAGCTTGACGCTGATATCCTCGGCTGTATGCTGGCTTATACATTTCA
CCCCCAGAATCTTTATCATATAAGTTATGTACTGCATTTAGCGAAAGCAT
GCGGCCCGAAGAAGGTAACCTTGAAGTAGAAAACCGACTTTCAGTTTTCC
TCCAGAACTTGGGACTCAAAAATTCAGCACCAGGCAGCTTGCAACATTTG
TTATCTGTAGAATCCATGTTCAGAATCCTGCCACTTGAAATGGCCAAGTC
ATATGATATTTCATCCAGAGCCATCTCCAGGCCATTTACGCGTGTCTCTA
GAGAATTGATCCCACTTTGGGAGCTCCCAATGAATTTCTGGAGGAGGTTC
AATAGATTGGACTGCTGATCTTCAATCTGAGCAAGTTGTTCACGGATCAA
ACACAGATCCTCGATGTCTTTTGGATTCTCATCGACATATAGAGCAGCAT
TTTTATCAGTAACATCTAAATTCTCCTCGTCATGAAAAGGAAGCACCTGA
GACTGAGACCTCAAACCGCCAAATTTCTGCACTTTTTCGTCATGGGCCTT
GCCAAAGGATACACTCCTTTTGATATTGTAATCACCAGAGGCCTCAGAAA
ACAAAGACTTCGGCTGAACAGTTTCAATCTTCCAATCAGAAGATTTTGAG
CGGTCCAGCCTACGAGTGTTACTGTTGCTATTATTACTTTTCAGGGATGT
CTCTTTCTTGGCAGTGGACGCAGCCGAGGCATCAGAAGGAGGGGACCTGC
TCGTAGGGACAACTTTTTTTGATTGGGGAGTTCTAAAACCAACATCATTC
ATACCTTTGGAAACTGAAGTAAAGCATCCAACGCTACCATTATCTATTGA
AGATGAGTCGGATTGAGAAGTGGTGGAGACTTCCTCACAAACTCCAGGAA
CATCCTTCCATAAATCCAAACTACGATTCATGGTTTCTCGGACAATCTTT
ACCTTATCAAACCTCTTATTGCCAAGAGCGGTCACACACGCCGCTTTATA
CTCAGCTGCCAGTTCTTTCTCCGCCATAGCCACCTTCCCTAACGCGTCCG
CCGCCGCCTTTCTCGTTCCCCAGTCTTCGCTACTCAAAGACTCCACCGCG
CATGACACAAACCAATCCAGGACTCCTTTACTTCCGGCACCGCCAACACT
AGCGACGCTTCCAATAACTCCAAACACCGCCGCTTTCGCTTTGAAACTCT
CGCTCCTTACTAACTTCCCCAACTTCGGCAACACCTTCTTAAGCTGCTCC
GTCTCGGGATCCGGCGCCGCCTCGATCGCCGCGGACAAACACATCGCCGC
ACCGATCTGCGAGTTAACGTCTTGCTCCACCACGAGCATTTCGATCAAAG
GCTTCGACAAAACAGAAAATGGAGGCTTCGTGATGTGAGACGACATAGCG
GTCGTTGCCTCGACACAAGCGGACCGGACGGCGGAGTCGGGGTCACGGAG
GCGGCGAGCAAGGGTGGAAATCATCTTAGAAAGGTGGGGAGATAAGACGT
TACCGTGCGACTGAGACATCAAAGTCAAAAGGATTACACATTGCCTCCGA
ACGGGAGACTTGGCGGAAGAGTCGGTATTGTGAAGGCAGTTGAGGAAGGG
AGAGATGGAATCGACAGTCAGGTTCCGAGCGATGGACTCGAGCTCAGCGG
AAGCGAGAGCGAGAGTGTCGCGGTCGGCGAGTTTGTTAAGGCAAGTGAAA
ACGCGTTGTTTGAGATCGTGCAGTTGCTGTTGAGGACTTTGCGGTGACCG
ATTCTTGGAAGACATTGTTGTTTATGGCTAAGCTTTGATTTCCGCGACGC
CTTCCCCTTCTAACCTTTGGGTCTAACACTTGCAGCAGCATTCGAGAGGA
AAATGGAATTGGCGGAGAAATTTTAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR026003Cohesin_HEAT
IPR011989ARM-like
IPR033337TORTIFOLIA1/SPIRAL2-like
IPR016024ARM-type_fold
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding