g.barbadense_cottongen_reftransV1_0097514, g.barbadense_cottongen_reftransV1_0097514 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097514
Unique Nameg.barbadense_cottongen_reftransV1_0097514
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3128
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana GN=OEP80 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.360e-46
Identity = 100/256 (39.06%), Postives = 146/256 (57.03%), Query Frame = 2 
Query:  341 TGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWV------AQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            T  PLS +IGS    H NLFG ++KL+VS ++G  DS   + Y  P   W+        +  ++Q+S +P   VHG   DN S      + + R + G++ + P   KW+ T  + F++     +  + I +D    P+T SG  HD  ++ K ES Y  + +   + F   +EQG+PVL +WL FNR    A KGI +GPA  L SL+GG +VG  +P++AF IGG  SVRGY EGAVGSGRS +V + E++FP+
Sbjct:  412 TSGPLSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDP---WIEGDDKRTSRSIMVQNSRTPGNLVHGNQPDNSS------LTIGRVTAGVEYSRPFRPKWNGTAGLIFQHAGARDEQGNPIIKDFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGRARKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELSFPV 658
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.994e-42
Identity = 97/261 (37.16%), Postives = 144/261 (55.17%), Query Frame = 2 
Query:  341 TGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWV------AQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPLVCNCF 1105
            T  PLS +IGS    H N+FG ++KL++S ++G  DS   + Y  P   W+        +  ++Q+S +P   +HG           G + + R + G++ + P   KWS T  + F++     D  + I RD     +T SGNA+D  ++ K ES Y  + + S + F   IEQG+P+L +WL FNR      +G ++GPA LL S +GG + G+ +P++AFAIGG  SVRGY EGAVGSGRS  V + EV+    C  F
Sbjct:  344 TNGPLSGLIGSFAYSHRNVFGRNKKLNLSLERGQIDSIFRLNYTDP---WIDGDNKRTSRTIMVQNSRTPGTLIHG-----GDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVS----CRMF 592
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSI (Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.362e-42
Identity = 97/261 (37.16%), Postives = 144/261 (55.17%), Query Frame = 2 
Query:  341 TGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWV------AQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPLVCNCF 1105
            T  PLS +IGS    H N+FG ++KL++S ++G  DS   + Y  P   W+        +  ++Q+S +P   +HG           G + + R + G++ + P   KWS T  + F++     D  + I RD     +T SGNA+D  ++ K ES Y  + + S + F   IEQG+P+L +WL FNR      +G ++GPA LL S +GG + G+ +P++AFAIGG  SVRGY EGAVGSGRS  V + EV+    C  F
Sbjct:  344 TNGPLSGLIGSFAYSHRNVFGRNKKLNLSLERGQIDSIFRLNYTDP---WIDGDNKRTSRTIMVQNSRTPGTLIHG-----GDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVS----CRMF 592
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: TC753_ARATH (Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.097e-9
Identity = 59/200 (29.50%), Postives = 87/200 (43.50%), Query Frame = 2 
Query:  539 GVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFS------RFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLG----------PAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            GV     +NF+R        S+F+ GL + E  +   SS  +   +  RLL     S     DG P T SG   D M  L  ++   + N    +      R   Q++QG+ + SK+  FNR +   +K I+L           P  L+     G  VGD+  Y AF +GG  SVRGY  G +G+ R+      E+  P+
Sbjct:  564 GVKANITENFTRQ-------SKFTYGLVMEEITTRDESSHIAANGQ--RLLPSGGISA----DGPPTTLSGTGVDRMAFL--QANITRDNTKFVNGAVVGQRTVFQVDQGLGIGSKFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVLGGPYSVRGYNMGELGAARNIAEVGAEIRIPV 748
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: TOC75_PEA (Protein TOC75, chloroplastic OS=Pisum sativum GN=TOC75 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 7.120e-9
Identity = 59/200 (29.50%), Postives = 87/200 (43.50%), Query Frame = 2 
Query:  539 GVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSF------SRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKL----------GPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            GV     +NFSR        S+F+ GL + E  +   S+      +  R+L +   S     DG P T SG   D M  L  ++   + N          SR   Q++QG+ V S +  FNR +   +K ++L           P  L+     G  VGD+  Y AF +GG  SVRGY  G +G+ R+ L    E+  P+
Sbjct:  555 GVKANITENFSRQ-------SKFTYGLVMEEIITRDESNHICSNGQ--RVLPNGAISA----DGPPTTLSGTGIDRMAFL--QANITRDNTRFVNGTIVGSRNMFQVDQGLGVGSNFPFFNRHQLTVTKFLQLMSVEEGAGKSPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGEIGAARNILELAAEIRIPI 739
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: TOC75_ORYSJ (Protein TOC75, chloroplastic OS=Oryza sativa subsp. japonica GN=TOC75 PE=2 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 1.224e-8
Identity = 46/145 (31.72%), Postives = 68/145 (46.90%), Query Frame = 2 
Query:  722 LDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFS------RFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLG----------PAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPLVCNCFI 1108
            +DG P T SG   D M  L  ++   + N    +      R   Q++QG+ + SK   FNR +   +K + L           PA L+        VGD+  Y AF +GG  SVRGYG G +G+ R+ L   +E+  P V N ++
Sbjct:  611 MDGPPTTLSGTGIDRMAFL--QANITRDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVASELRIP-VRNTYV 752
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: TC754_ARATH (Protein TOC75-4, chloroplastic OS=Arabidopsis thaliana GN=TOC75-4 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 9.071e-7
Identity = 46/184 (25.00%), Postives = 83/184 (45.11%), Query Frame = 2 
Query:  623 LNEPASSKWSSTTSVKFENVRLLSDDDHSITRD-----------LDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFS------RFTMQIEQGIPVLSKWLIFNRFK-----FVASKGIKLG------PAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            + E  + +   T  V FE + +  D++  I+ +           ++G P T SG   D +  L  ++   + N    +      +   Q++QG+ + + + +FNR +     F+  K ++ G      P  +L    GG I GD+  Y  FA+GG  SVRGY  G +G+ ++ L    E+  P+
Sbjct:  147 ITENLTRQRELTYGVMFEEI-ITRDENRRISENGLLLSPDGGISINGPPTTLSGTGIDHIATL--QANITRDNTKLVNGAVVGEKNIFQVDQGLGIGNNFPLFNRHQLSLTSFIQLKQVEEGSDKPQPPVLVLHGRYGGCI-GDLPSYDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPV 326
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: A0A0D2S1C0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G116800 PE=4 SV=1)

HSP 1 Score: 592.423 bits (1526), Expect = 0.000e+0
Identity = 288/293 (98.29%), Postives = 289/293 (98.63%), Query Frame = 2 
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPLVCNCFIIK 1114
            MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRN GSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDD  SITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVT PLVCNCFI+K
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNAGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDGRSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTLPLVCNCFIVK 293
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: A0A0D2Q816_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G116800 PE=4 SV=1)

HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0
Identity = 281/285 (98.60%), Postives = 281/285 (98.60%), Query Frame = 2 
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRN GSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDD  SITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVT PL
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNAGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDGRSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTLPL 285
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: A0A0D2SVY0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G116800 PE=4 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 281/285 (98.60%), Postives = 281/285 (98.60%), Query Frame = 2 
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRN GSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDD  SITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVT PL
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNAGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDGRSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTLPL 285

HSP 2 Score: 112.464 bits (280), Expect = 5.328e-23
Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 2 
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNLAS 2323
            V GNPAMRQGKPGSGVGFGYGLRFKSP+GHFQVDYAINAFQQKTLYFGVTNLAS
Sbjct:  307 VPGNPAMRQGKPGSGVGFGYGLRFKSPLGHFQVDYAINAFQQKTLYFGVTNLAS 360
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: A0A061GTW5_THECC (Outer membrane OMP85 family protein isoform 3 OS=Theobroma cacao GN=TCM_041215 PE=4 SV=1)

HSP 1 Score: 556.984 bits (1434), Expect = 0.000e+0
Identity = 270/285 (94.74%), Postives = 279/285 (97.89%), Query Frame = 2 
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAGKAKIDVNVDFTHK+CAS+ LPSLRN+GSPLSL+IGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSR SVGLDLNEPASSKWSSTTS+KFENVRLL+DD  SITRDLDGFPVTCSGNAHDSMVVLKQESQYAKAN+ SFSRFTMQIEQGIPVLSKWLIFNRFK VASKGIK+GPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTE+TFPL
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKLCASLRLPSLRNSGSPLSLLIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRLSVGLDLNEPASSKWSSTTSIKFENVRLLNDDGRSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANDRSFSRFTMQIEQGIPVLSKWLIFNRFKCVASKGIKVGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTELTFPL 285

HSP 2 Score: 107.071 bits (266), Expect = 2.904e-21
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 2 
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNLAS 2323
            V GNPA+RQGKPGSGVG GYGLRFKSP+GHFQVDYAINAF QKTLYFG+TNLAS
Sbjct:  307 VPGNPALRQGKPGSGVGLGYGLRFKSPIGHFQVDYAINAFHQKTLYFGITNLAS 360
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: A0A061GV40_THECC (Outer membrane OMP85 family protein isoform 1 OS=Theobroma cacao GN=TCM_041215 PE=4 SV=1)

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 271/295 (91.86%), Postives = 281/295 (95.25%), Query Frame = 2 
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTS----LTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPLVCNCFI 1108
            MGAQKSIHAGKAKIDVNVDFTHK+CAS+ LPSLRN+GSPLSL+IGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSR SVGLDLNEPASSKWSSTTS+KFENVRLL+DD  SITRDLDGFPVTCSGNAHDSMVVLKQESQYAKAN+ SFSRFTMQIEQGIPVLSKWLIFNRFK VASKGIK+GPAFLLT     LTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTE+TFPL+  C I
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKLCASLRLPSLRNSGSPLSLLIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRLSVGLDLNEPASSKWSSTTSIKFENVRLLNDDGRSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANDRSFSRFTMQIEQGIPVLSKWLIFNRFKCVASKGIKVGPAFLLTRHAMLLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTELTFPLIVFCCI 295

HSP 2 Score: 107.071 bits (266), Expect = 3.023e-21
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 2 
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNLAS 2323
            V GNPA+RQGKPGSGVG GYGLRFKSP+GHFQVDYAINAF QKTLYFG+TNLAS
Sbjct:  318 VPGNPALRQGKPGSGVGLGYGLRFKSPIGHFQVDYAINAFHQKTLYFGITNLAS 371
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: A0A061GUW3_THECC (Outer membrane OMP85 family protein isoform 4 OS=Theobroma cacao GN=TCM_041215 PE=4 SV=1)

HSP 1 Score: 537.724 bits (1384), Expect = 6.021e-179
Identity = 264/285 (92.63%), Postives = 272/285 (95.44%), Query Frame = 2 
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAGKAKIDVNVDFTHK+CAS+ LPSLRN+GSPLSL+IGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSR SVGLDLNEPASSKWSSTTS+KFENVRLL+DD  SITRDLDGFPVTCSGNAHDSMVVLKQESQYAK        FTMQIEQGIPVLSKWLIFNRFK VASKGIK+GPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTE+TFPL
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKLCASLRLPSLRNSGSPLSLLIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRLSVGLDLNEPASSKWSSTTSIKFENVRLLNDDGRSITRDLDGFPVTCSGNAHDSMVVLKQESQYAK--------FTMQIEQGIPVLSKWLIFNRFKCVASKGIKVGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTELTFPL 277

HSP 2 Score: 107.071 bits (266), Expect = 2.732e-21
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 2 
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNLAS 2323
            V GNPA+RQGKPGSGVG GYGLRFKSP+GHFQVDYAINAF QKTLYFG+TNLAS
Sbjct:  299 VPGNPALRQGKPGSGVGLGYGLRFKSPIGHFQVDYAINAFHQKTLYFGITNLAS 352
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: V4UDE4_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100287081mg PE=4 SV=1)

HSP 1 Score: 528.094 bits (1359), Expect = 5.511e-176
Identity = 252/285 (88.42%), Postives = 275/285 (96.49%), Query Frame = 2 
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAGKAKIDVNVDFTHK+CAS+MLP  RNT SPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRP+W++QQCFV+QHSLSPE+GVHG+P+DNFSRSGSGGVNLSR S+GLD++EP SSKWS+TTS+KFE+VR ++DD  SITRDLDGFPVTCSG+ HDSMVVLKQES+YAKAN+ SFSRF+MQIEQGIPVLSKWLIFNRFKFVASKG+KLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTE+TFPL
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKLCASLMLPPPRNTSSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPEWLSQQCFVIQHSLSPEVGVHGVPIDNFSRSGSGGVNLSRLSLGLDISEPISSKWSNTTSLKFEHVRPVNDDWRSITRDLDGFPVTCSGSNHDSMVVLKQESRYAKANDRSFSRFSMQIEQGIPVLSKWLIFNRFKFVASKGVKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTELTFPL 285
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: A0A067E165_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018123mg PE=4 SV=1)

HSP 1 Score: 527.324 bits (1357), Expect = 8.352e-175
Identity = 251/285 (88.07%), Postives = 275/285 (96.49%), Query Frame = 2 
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAGKAKIDVNVDFTHK+CAS+MLP  RNT SPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSN+LVAYRRPRP+W++QQCFV+QHSLSPE+GVHG+P+DNFSRSGSGGVNLSR S+GLD++EP SSKWS+TTS+KFE+VR ++DD  SITRDLDGFPVTCSG+ HDSMVVLKQES+YAKAN+ SFSRF+MQIEQGIPVLSKWLIFNRFKFVASKG+KLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTE+TFPL
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKLCASLMLPPPRNTSSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAYRRPRPEWLSQQCFVIQHSLSPEVGVHGLPIDNFSRSGSGGVNLSRLSLGLDISEPISSKWSNTTSLKFEHVRPVNDDWRSITRDLDGFPVTCSGSNHDSMVVLKQESRYAKANDRSFSRFSMQIEQGIPVLSKWLIFNRFKFVASKGVKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTELTFPL 285

HSP 2 Score: 93.5893 bits (231), Expect = 4.699e-17
Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = 2 
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNLAS 2323
            V GNPA+RQGKPGSG G GYGLR++SP G  Q+D AINAFQQKTLYFG+TNLAS
Sbjct:  307 VPGNPALRQGKPGSGAGLGYGLRYRSPFGSLQLDCAINAFQQKTLYFGITNLAS 360
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: A0A067L6U1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23905 PE=4 SV=1)

HSP 1 Score: 519.235 bits (1336), Expect = 1.043e-171
Identity = 245/285 (85.96%), Postives = 269/285 (94.39%), Query Frame = 2 
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAGKAKIDVNVDFTHK+CAS+MLP LR+ GSPLSL+IGSLCIKHPNLFGGSEKLDVSWDKGLYDSN+LVAYRRPRP+W+AQQCF++QHS+SPEIGVHG P+DNFSRSGSGGVNLSR S GLDLNEPASS+WSSTTS KFE+VRLL+DD  S+  D DGFPVTCSG  HD MVVLKQES+YAKAN+HSFSRF+MQIEQGIPVLSKWLIFNRFKFVA++G+KLGPAF L SLTGGSIVGDMAPYQAFAIGG+GSVRGYGEGAVGSGRSCLVAN+E+TFPL
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKLCASLMLPPLRHAGSPLSLIIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAYRRPRPEWLAQQCFIIQHSVSPEIGVHGTPIDNFSRSGSGGVNLSRLSFGLDLNEPASSRWSSTTSFKFEHVRLLNDDGRSMISDHDGFPVTCSGRPHDCMVVLKQESRYAKANDHSFSRFSMQIEQGIPVLSKWLIFNRFKFVATRGVKLGPAFFLASLTGGSIVGDMAPYQAFAIGGVGSVRGYGEGAVGSGRSCLVANSELTFPL 285

HSP 2 Score: 98.2117 bits (243), Expect = 1.601e-18
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 2 
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNLAS 2323
            V GNPA+RQGKPGSG+G GYGLR KSP+GH QVDYAINAF QKTLYFG++NL S
Sbjct:  307 VPGNPALRQGKPGSGIGLGYGLRLKSPIGHLQVDYAINAFHQKTLYFGISNLIS 360
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: W9RH86_9ROSA (Outer envelope protein 80 OS=Morus notabilis GN=L484_016286 PE=4 SV=1)

HSP 1 Score: 516.153 bits (1328), Expect = 2.082e-170
Identity = 243/286 (84.97%), Postives = 274/286 (95.80%), Query Frame = 2 
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNT-GSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAGKAKIDVNVDFTHK+CAS+M+P LR++ GSPLSL++GSLCIKHPNLFGGSEKLDVSWDKGLYDSN+LVAYRRPRP+W+AQQ F++QHSLSPEIGVHG+PVDNFSRSGSGGVNLS+ SVG+DLNEPASSKWSSTTS+KFE+VR L+DD HSITRD+DGFPVTCSG  HDSMVVLKQES++AKAN+ SF  F++QIEQG+PVLSKWLIFNRFKFVASKG+K+GPAFLLT +TGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVAN+E+TFP+
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKLCASLMVPHLRSSNGSPLSLIVGSLCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAYRRPRPEWLAQQSFIIQHSLSPEIGVHGVPVDNFSRSGSGGVNLSKLSVGMDLNEPASSKWSSTTSIKFEHVRPLNDDGHSITRDVDGFPVTCSGRLHDSMVVLKQESRFAKANDSSFCHFSLQIEQGVPVLSKWLIFNRFKFVASKGVKVGPAFLLTKMTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANSELTFPV 286

HSP 2 Score: 97.0561 bits (240), Expect = 4.442e-18
Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 2 
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNLAS 2323
            V GNPA+RQGKPGSG G GYGLR KS  GHFQVDYAINAFQQ+TLYFG++NLAS
Sbjct:  308 VPGNPALRQGKPGSGFGLGYGLRLKSQFGHFQVDYAINAFQQRTLYFGLSNLAS 361
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
OEP80_ARATH9.360e-4639.06Outer envelope protein 80, chloroplastic OS=Arabid... [more]
OEP80_ORYSJ1.994e-4237.16Outer envelope protein 80, chloroplastic OS=Oryza ... [more]
OEP80_ORYSI2.362e-4237.16Outer envelope protein 80, chloroplastic OS=Oryza ... [more]
TC753_ARATH1.097e-929.50Protein TOC75-3, chloroplastic OS=Arabidopsis thal... [more]
TOC75_PEA7.120e-929.50Protein TOC75, chloroplastic OS=Pisum sativum GN=T... [more]
TOC75_ORYSJ1.224e-831.72Protein TOC75, chloroplastic OS=Oryza sativa subsp... [more]
TC754_ARATH9.071e-725.00Protein TOC75-4, chloroplastic OS=Arabidopsis thal... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2S1C0_GOSRA0.000e+098.29Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2Q816_GOSRA0.000e+098.60Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2SVY0_GOSRA5.328e-2398.60Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061GTW5_THECC2.904e-2194.74Outer membrane OMP85 family protein isoform 3 OS=T... [more]
A0A061GV40_THECC3.023e-2191.86Outer membrane OMP85 family protein isoform 1 OS=T... [more]
A0A061GUW3_THECC6.021e-17992.63Outer membrane OMP85 family protein isoform 4 OS=T... [more]
V4UDE4_9ROSI5.511e-17688.42Uncharacterized protein (Fragment) OS=Citrus cleme... [more]
A0A067E165_CITSI8.352e-17588.07Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A067L6U1_JATCU1.043e-17185.96Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
W9RH86_9ROSA2.082e-17084.97Outer envelope protein 80 OS=Morus notabilis GN=L4... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.160.50coord: 182..332
e-value: 3.3E-8
score: 32.8
NoneNo IPR availablePANTHERPTHR12815SORTING AND ASSEMBLY MACHINERY SAM50 PROTEINcoord: 38..332
NoneNo IPR availablePANTHERPTHR12815:SF10OUTER MEMBRANE OMP85 FAMILY PROTEINcoord: 38..332
IPR000184Bacterial surface antigen (D15)PFAMPF01103Bac_surface_Agcoord: 100..332
e-value: 1.1E-10
score: 41.5

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097514 ID=g.barbadense_cottongen_reftransV1_0097514; Name=g.barbadense_cottongen_reftransV1_0097514; organism=Gossypium barbadense; type=contig; length=3128bp
ATACTGAACACATGGATACATAAATAAGGCTTCTTTCCCTTTCACCAAAG
AAAAACATCACACGGAACACAAGACTCTTGTTTTTCCTTCTTCTTTGTTA
TGCTGTGTCTTTGATATTTTGCACAATTTCGTTTCATTTCATGCGAAATG
CAATCTTTGTCTAACTCACAACACTAACCCATTTTTTCCATCCATCCATT
TCCCTTTGCTTAATGGTTTTTTCATCTCTAACTCTATGGGGGCTCAGAAG
AGCATCCATGCAGGCAAAGCCAAGATTGATGTTAATGTTGATTTCACCCA
CAAGATATGTGCTTCTATGATGCTTCCTTCTTTAAGGAACACTGGCAGTC
CTCTATCCCTCGTAATTGGCAGTCTTTGCATTAAACACCCAAATTTATTT
GGTGGAAGTGAGAAGCTTGATGTATCATGGGATAAGGGGTTATATGATTC
AAATATCTTGGTAGCTTACAGGAGGCCTCGACCACAATGGGTTGCTCAAC
AATGTTTTGTTATGCAGCACTCACTTTCACCTGAGATTGGTGTTCATGGT
ATACCTGTGGACAATTTCTCTCGTTCGGGGAGTGGAGGTGTGAATTTGTC
TCGATTTTCAGTTGGATTGGATCTAAATGAACCTGCAAGTTCTAAATGGA
GCAGCACAACAAGTGTAAAGTTTGAGAATGTTCGCCTGTTGAGTGATGAT
GACCACTCCATTACCAGAGATCTTGATGGTTTTCCTGTCACTTGCAGTGG
CAATGCTCATGACAGTATGGTAGTCTTAAAGCAAGAATCTCAATATGCGA
AGGCAAACGAGCATAGTTTTTCTCGTTTTACTATGCAAATAGAACAAGGG
ATTCCAGTTCTATCCAAGTGGTTAATCTTCAACCGTTTCAAATTTGTTGC
ATCAAAGGGCATCAAACTTGGACCGGCCTTTCTCTTGACAAGCCTGACAG
GTGGTTCGATTGTGGGAGATATGGCTCCATATCAAGCATTTGCAATCGGT
GGTCTAGGCAGCGTGAGAGGGTATGGTGAAGGTGCCGTTGGATCTGGAAG
ATCATGTTTGGTTGCTAATACTGAAGTGACATTTCCTTTGGTATGTAATT
GCTTTATTATAAAATAGAGGGCACTGCATCTAACAATCTATATTTTGTTA
TTTTTCACACATCTATCATCTTTGATAGCTGTTTAATGGCATGTGTAACT
GTTATAGTTCTGTATGTACCATTTGAAATTTCTTTAACTTCAAAAGATGG
CTGTTAGATTAGGAGAGTGATTAGAAGCCAAACCAAACTGAAAATTAATA
ACGTACTGATAATTATCCCTGGAAATTTATTTTAAAATATAGGATGAAGT
TGTGTTTAAATAAAATATGGAATGATGAAATTCCTATACATGCTACACTC
AAAGTACTTTATGGTATATATAAAAATTATATTGTATATTTTGATTTGAT
TATATCAATTAAAAGAGAAAGGCCCTGAAAAATCCCGAGAGGTAATTAAA
AACCAAGATTTTGTTTTTGCTGCTATTCAGTTCTAAAATTTGTGAATGGG
AATTTTTGGTTATGTCATTGCATATGTGTTGACTTAATTTTGCTGCAATC
AGAGCAAAATGTTGGAAGGTTCTGTTTTCCTGGACTGTGGAACTGATCTG
GGCTCGGGTCGGCTTGTACCTGGTGAGTCCCATTCATCTACTTCCTTATG
AAGTTGTGATCTTAATATGCTTCTAGTTTTCACTGAACATTGTTTCTGAC
CTTTAGTTAATTCTCAACTAGTTGCATTGTGTATCACATGTTTAAAACAG
CCTGATTTAGCTTTCTGCAACTCAGCTTTTGCATTTATCATGACTATGAG
CACCCCGAAATTCGTCAATGCCTGCTGATATCATCATCACTAGAATATAT
GGTTGTTTCAGCGAGGTAGTTGATTTTAGATTTTAGGTTCTGGTGATGTG
ATGCAACGAATCTTGAATCTTTGGGCTTGTGGATACTTTGAGAACAAATT
ATTCCTGTAACATCGATTTGCTTCTTATATGCCTTAGGTATGTGAAGTTA
GACATTCTTGCTATTCTAGGAACACGCCGTTGCCAATATTTACATTTATG
GAAGCCATTATCAGTGAAGCGTAACTACCATTCCAGGATTTATTACCGGT
TTAATTTATGAGTTTCAGGAAATCCAGCCATGAGACAAGGTAAACCAGGA
TCTGGAGTTGGGTTCGGGTACGGTCTTCGGTTCAAGTCTCCAGTTGGTCA
TTTCCAGGTTGATTATGCCATCAATGCCTTTCAACAAAAGACTCTATACT
TTGGCGTCACAAATCTTGCATCTTGAATTCACTTTAAAACCATACACAAG
CTGCCAAATTTCTTCTCATTGTGTAGCGGAAAAAGAAAAAGAAATGACAA
GATTGGGGGACGCTGCACACTGACATGTTGATTCATGGAGAAACACTTGA
AGCTTTGCCCCATAGCGTAGTTGCAATTTCGTGGGGGAAAAAGATGATGG
CGTCATTGATTGTTAAAAGCAGTAGAGACAGGTAGGAACATTGAAATTAA
ACGGTGTCGAGGCTGAAATTCTTTCCACAAATAGAAGCTGCTCAAATACC
ACTTCACTTTCTTCTTTACATTTATTTTCCTTAACTGTAACAAAATTTTC
AAACCAAATTTAACTCACTTTCAAAGCATGATATTCAGTAGGGGGTACAA
AATCAAAATTATAAAATCCGTACCCATTTTCTTTTAGATCAGTCACTTTT
ATTAATATTTTAGAAAATAAAAAATCACTAAACTTTTTACTTGTGAACCT
CTAAGAAGGATGGCTTAAACATTCCGTAACATTTAATCACAACTGATTAC
AACATTAACACATGAAATCTACTGACCTTATTGGCTTATTCCCATGACAA
ATCAAGCCAAGCCAAACCAATCTCAACTCTACCACGGAGATGGAGCAATT
TTATGACAAGAAAATAAAGCCATAACATCTCGTGCTGTAATTCAATATAT
ATATAATATAGTATATACACACTATAACAAGACCCGGGTGGATGGCAGCC
CCAACAGGTTTGTCATCACAAATACTTCCTTACAGATCAACGGCCTGTGC
CATATTTTTTGTAGGATTTGAGTCCCCA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000184Bac_surfAg_D15
Vocabulary: Cellular Component
TermDefinition
GO:0019867outer membrane