g.barbadense_cottongen_reftransV1_0097170, g.barbadense_cottongen_reftransV1_0097170 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR5_ARATH (Soluble inorganic pyrophosphatase 5 OS=Arabidopsis thaliana GN=PPA5 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.738e-64 Identity = 77/155 (49.68%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVC DDPEYKH T+I +LPPHRL+EIRRFFED KKNENKEVAVND L AIEAIQYSM Sbjct: 114 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFEDY------------------------------------KKNENKEVAVNDFLQPGPAIEAIQYSM 203 HSP 2 Score: 75.485 bits (184), Expect = 3.738e-64 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGF+PRTLCEDNDP+D LVIMQ Sbjct: 77 KVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQ 113 HSP 3 Score: 62.3882 bits (150), Expect = 3.738e-64 Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 1 Query: 220 KIKRMSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 K + + + P PRLNERILS++SKRSVAAHPWHDLEIG Sbjct: 7 KTSQPQKKLQNPTPRLNERILSSLSKRSVAAHPWHDLEIG 46 HSP 4 Score: 45.0542 bits (105), Expect = 3.738e-64 Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P V+EISKGSKVKYELDKKTG+IKV Sbjct: 45 IGPGAPVIFNVVIEISKGSKVKYELDKKTGLIKV 78
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_SOLTU (Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.986e-64 Identity = 81/165 (49.09%), Postives = 88/165 (53.33%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E PVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+H+TDIK LPPHRL EIRRFFED KKNENK+VAV+D LP N+A+ AIQYSM Sbjct: 101 MDVLVLMQE--PVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYTDIKQLPPHRLAEIRRFFEDY------------------------------------KKNENKDVAVDDFLPPNSAVNAIQYSM 198 HSP 2 Score: 73.9442 bits (180), Expect = 4.986e-64 Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYP NYGFIPRTLCEDNDPMD LV+MQ Sbjct: 72 KVDRILYSSVVYPQNYGFIPRTLCEDNDPMDVLVLMQ 108 HSP 3 Score: 57.7658 bits (138), Expect = 4.986e-64 Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 1 Query: 259 PRLNERILSAMSKRSVAAHPWHDLEIG 339 PRLNERILS++S+RSVAAHPWHDLEIG Sbjct: 15 PRLNERILSSISRRSVAAHPWHDLEIG 41 HSP 4 Score: 45.4394 bits (106), Expect = 4.986e-64 Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P V+EISKGSKVKYELDKKTG+IKV Sbjct: 40 IGPEAPSVFNVVIEISKGSKVKYELDKKTGLIKV 73
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR4_ARATH (Soluble inorganic pyrophosphatase 4 OS=Arabidopsis thaliana GN=PPA4 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.250e-60 Identity = 71/155 (45.81%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPV+PGCFLRA+A+GLMPMIDQ GEKDDKIIAVCADDPEY+H+ DI +LPPHR+ EIRRFFED KKNENKEVAVND LP A +A+Q+SM Sbjct: 114 EPVIPGCFLRAKAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYNDISELPPHRMAEIRRFFEDY------------------------------------KKNENKEVAVNDFLPATAAYDAVQHSM 203 HSP 2 Score: 73.9442 bits (180), Expect = 4.250e-60 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCED+DP+D LVIMQ Sbjct: 77 KVDRILYSSVVYPHNYGFIPRTLCEDSDPIDVLVIMQ 113 HSP 3 Score: 55.4546 bits (132), Expect = 4.250e-60 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 1 Query: 259 PRLNERILSAMSKRSVAAHPWHDLEIG 339 P LNERILS+MS RSVAAHPWHDLEIG Sbjct: 20 PTLNERILSSMSHRSVAAHPWHDLEIG 46 HSP 4 Score: 43.1282 bits (100), Expect = 4.250e-60 Identity = 27/64 (42.19%), Postives = 29/64 (45.31%), Query Frame = 3 Query: 369 GSEAPTVFNCVSLY*LDMEMAKFPCMHY*LFGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G EAP +FNCV VEI KGSKVKYELDK TG+IKV Sbjct: 46 GPEAPIIFNCV-------------------------------VEIGKGSKVKYELDKTTGLIKV 78
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR2_ARATH (Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.767e-54 Identity = 77/178 (43.26%), Postives = 87/178 (48.88%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM--YASSLKECHHR 1334 MD L M E PVL G FLRARA+GLMPMIDQ GEKDDKIIAVCADDPE++H+ DIK+LPPHRL EIRRFFED KKNENK+V V LP AI+AI+ SM YA+ +K R Sbjct: 108 MDVLVLMQE--PVLTGSFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFFEDY------------------------------------KKNENKKVDVEAFLPAQAAIDAIKDSMDLYAAYIKAGLQR 218 HSP 2 Score: 73.559 bits (179), Expect = 1.767e-54 Identity = 30/37 (81.08%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSS+VYPHNYGFIPRT+CED+DPMD LV+MQ Sbjct: 79 KVDRVLYSSIVYPHNYGFIPRTICEDSDPMDVLVLMQ 115 HSP 3 Score: 45.8246 bits (107), Expect = 1.767e-54 Identity = 19/29 (65.52%), Postives = 21/29 (72.41%), Query Frame = 1 Query: 253 PRPRLNERILSAMSKRSVAAHPWHDLEIG 339 P LNER +A + RS AAHPWHDLEIG Sbjct: 20 PNVTLNERNFAAFTHRSAAAHPWHDLEIG 48 HSP 4 Score: 45.4394 bits (106), Expect = 1.767e-54 Identity = 28/64 (43.75%), Postives = 30/64 (46.88%), Query Frame = 3 Query: 369 GSEAPTVFNCVSLY*LDMEMAKFPCMHY*LFGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G EAPTVFNCV VEISKG KVKYELDK +G+IKV Sbjct: 48 GPEAPTVFNCV-------------------------------VEISKGGKVKYELDKNSGLIKV 80
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_HORVD (Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.494e-54 Identity = 71/165 (43.03%), Postives = 78/165 (47.27%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E PV+PG FLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+H++ L P RL EI+R ED KKNENKEVAV+ LP TA EAIQYSM Sbjct: 107 MDVLVLMQE--PVIPGSFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYSTSVSLLP-RLQEIKR-LEDY------------------------------------KKNENKEVAVDAFLPATTAREAIQYSM 202 HSP 2 Score: 77.411 bits (189), Expect = 2.494e-54 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCEDNDPMD LV+MQ Sbjct: 78 KVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQ 114 HSP 3 Score: 55.4546 bits (132), Expect = 2.494e-54 Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 1 Query: 238 ESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 + T P P+LNERILS++S+R AHPWHDLEIG Sbjct: 14 QPTSRPAPKLNERILSSLSRRGGGAHPWHDLEIG 47 HSP 4 Score: 45.4394 bits (106), Expect = 2.494e-54 Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEI+KGSKVKYELDKKTG+IKV Sbjct: 46 IGPGAPAVFNVVVEITKGSKVKYELDKKTGLIKV 79
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR1_ARATH (Soluble inorganic pyrophosphatase 1 OS=Arabidopsis thaliana GN=PPA1 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.081e-54 Identity = 79/155 (50.97%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVC DDPEYKH+TDIK+LPPHRL+EIRRFFED KKNENKEVAVND LP +A+EAIQYSM Sbjct: 110 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDY------------------------------------KKNENKEVAVNDFLPSESAVEAIQYSM 199 HSP 2 Score: 75.8702 bits (185), Expect = 4.081e-54 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGF+PRTLCEDNDP+D LVIMQ Sbjct: 73 KVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQ 109 HSP 3 Score: 44.669 bits (104), Expect = 4.081e-54 Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 VVEI+KGSKVKYELDKKTG+IKV Sbjct: 52 VVEITKGSKVKYELDKKTGLIKV 74 HSP 4 Score: 61.6178 bits (148), Expect = 4.867e-9 Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 1 Query: 232 MSEST------EAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 MSE T + P PRLNERILS++S+RSVAAHPWHDLEIG Sbjct: 1 MSEETKDNQRLQRPAPRLNERILSSLSRRSVAAHPWHDLEIG 42
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR3_ARATH (Soluble inorganic pyrophosphatase 3 OS=Arabidopsis thaliana GN=PPA3 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 7.640e-53 Identity = 79/155 (50.97%), Postives = 82/155 (52.90%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEYKHFTDIK L PHRL EIRRFFED KKNENK+VAVND LP +A EAIQYSM Sbjct: 114 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYKHFTDIKQLAPHRLQEIRRFFEDY------------------------------------KKNENKKVAVNDFLPSESAHEAIQYSM 203 HSP 2 Score: 76.2554 bits (186), Expect = 7.640e-53 Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDP+D LV+MQ Sbjct: 77 KVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQ 113 HSP 3 Score: 44.669 bits (104), Expect = 7.640e-53 Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 VVEI+KGSKVKYELDKKTG+IKV Sbjct: 56 VVEITKGSKVKYELDKKTGLIKV 78 HSP 4 Score: 61.6178 bits (148), Expect = 4.267e-9 Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 226 KRMSESTEAPRP--RLNERILSAMSKRSVAAHPWHDLEIG 339 + ES+++PRP +LNERILS +S+RSVAAHPWHDLEIG Sbjct: 7 EETQESSQSPRPVPKLNERILSTLSRRSVAAHPWHDLEIG 46
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_MAIZE (Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.764e-50 Identity = 76/165 (46.06%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E PV+PG FLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+H+ DI +L PHRL EI+RFFED KKNENKEVAV+ LP TA EAIQYSM Sbjct: 104 MDVLVLMQE--PVVPGSFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDY------------------------------------KKNENKEVAVDAFLPATTAREAIQYSM 201 HSP 2 Score: 77.0258 bits (188), Expect = 2.764e-50 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGF+PRTLCEDNDPMD LV+MQ Sbjct: 75 KVDRVLYSSVVYPHNYGFVPRTLCEDNDPMDVLVLMQ 111 HSP 3 Score: 45.0542 bits (105), Expect = 2.764e-50 Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 VVEI+KGSKVKYELDKKTG+IKV Sbjct: 54 VVEITKGSKVKYELDKKTGLIKV 76 HSP 4 Score: 60.4622 bits (145), Expect = 1.167e-8 Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 229 RMSESTEAPR--PRLNERILSAMSKRSVAAHPWHDLEIG 339 + + S E P+ P+LNERILS++S+RSVAAHPWHDLEIG Sbjct: 6 KTAASAEQPKRAPKLNERILSSLSRRSVAAHPWHDLEIG 44
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.050e-49 Identity = 78/165 (47.27%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E V+PGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+HF DIK++PPHRL EIRRFFED KKNENKEVAVN+ LP AI AI+YSM Sbjct: 104 MDVLVLMQE--QVVPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDY------------------------------------KKNENKEVAVNEFLPAEDAINAIKYSM 201 HSP 2 Score: 74.3294 bits (181), Expect = 8.050e-49 Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCED DPMD LV+MQ Sbjct: 75 KVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQ 111 HSP 3 Score: 40.4318 bits (93), Expect = 8.050e-49 Identity = 21/34 (61.76%), Postives = 23/34 (67.65%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEI +GSKVKYELDK TG+IKV Sbjct: 43 IGPGAPAVFNCVVEIPRGSKVKYELDKATGLIKV 76
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSI (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.050e-49 Identity = 78/165 (47.27%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 MD L M E V+PGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+HF DIK++PPHRL EIRRFFED KKNENKEVAVN+ LP AI AI+YSM Sbjct: 104 MDVLVLMQE--QVVPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDY------------------------------------KKNENKEVAVNEFLPAEDAINAIKYSM 201 HSP 2 Score: 74.3294 bits (181), Expect = 8.050e-49 Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCED DPMD LV+MQ Sbjct: 75 KVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQ 111 HSP 3 Score: 40.4318 bits (93), Expect = 8.050e-49 Identity = 21/34 (61.76%), Postives = 23/34 (67.65%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEI +GSKVKYELDK TG+IKV Sbjct: 43 IGPGAPAVFNCVVEIPRGSKVKYELDKATGLIKV 76
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0D2MYL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G149100 PE=4 SV=1) HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0 Identity = 480/485 (98.97%), Postives = 481/485 (99.18%), Query Frame = -3 Query: 1762 PLHFANGGSSSRSYHAHIPKNTATIFXXXXXXXXXXSAHFPSLSVFPNIDSNRLRASAFNKGRKXXXXXTLFEMGGSXXXXXXXXXXXXXXXXXXXXXXXXEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTXXXXXXXXXXXXPGSKKGDQQNKKAESVPSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQIFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITDEVAISHFVDGPNANFDMKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEGRNNLNAISEAEASTADIMEPRFKRAAADLIALTPLERIRALEQKLLARGKQQRVPKEQKGQKLERFGSXXXXXXXXXXXXXXXXXXXXXXKLDIPGSAKRLKIKEKAQLTGAFSKYGLKTPSNSKEES 3216 PLHFANGGSSSRSYHAHIPKNTATIFLSSSLL LSQSAHFPSLSVFPNIDSNRLRASAFNKGRKGGGGTTLFEM GSDEDNDGDEFIDFDDEFD DDEDGDEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTVNVNNLKNNPVKPGSKKGDQQNKKAESVPSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQIFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSIT+EVAISHFVDGPNANFDMKNSSSDLSLESVSDEVDDHDDELVSDEFDDLDDELVSDEFDDQDDEFDEVEVGEGRNNLNAISEAEASTADIMEPRFKRAAADLIALTPLERIRALEQKLLARGKQQRVPKEQKGQKLER GSNNKKKVVAKQNQQKVTKEQKVQKLDIPGSAKRLKIKEKAQLTGAFSKYGLKTPSNSKEES Sbjct: 19 PLHFANGGSSSRSYHAHIPKNTATIFLSSSLLPLSQSAHFPSLSVFPNIDSNRLRASAFNKGRKGGGGTTLFEMDGSDEDNDGDEFIDFDDEFDADDEDGDEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTVNVNNLKNNPVKPGSKKGDQQNKKAESVPSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQIFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITEEVAISHFVDGPNANFDMKNSSSDLSLESVSDEVDDHDDELVSDEFDDLDDELVSDEFDDQDDEFDEVEVGEGRNNLNAISEAEASTADIMEPRFKRAAADLIALTPLERIRALEQKLLARGKQQRVPKEQKGQKLERVGSNNKKKVVAKQNQQKVTKEQKVQKLDIPGSAKRLKIKEKAQLTGAFSKYGLKTPSNSKEES 503
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0B0NZJ6_GOSAR (Eukaryotic translation initiation factor 3 subunit G OS=Gossypium arboreum GN=F383_22655 PE=4 SV=1) HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0 Identity = 456/483 (94.41%), Postives = 462/483 (95.65%), Query Frame = -3 Query: 1762 HFANGGSSSRSYHAHIPKNTATIFXXXXXXXXXXSAHFPSLSVFPNIDSNRLRASAFNKGRKXXXXXTLFEMGGSXXXXXXXXXXXXXXXXXXXXXXXXEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTXXXXXXXXXXXXPGSKKGDQQNKKAESVPSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQIFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITDEVAISHFVDGPNANFDMKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEGRNNLNAISEAEASTADIMEPRFKRAAADLIALTPLERIRALEQKLLARGKQQRVPKEQKGQKLERFGSXXXXXXXXXXXXXXXXXXXXXXKLDIPGSAKRLKIKEKAQLTGAFSKYGLKTPSNSKEES 3210 HFANGGSSSRS H I +NTATIFL+SSLL LSQSAHFPSLSVFPNID NRLRASAFNKGRKG GGTTLFEM GSDED+DGDEFIDFDDEFD D EDGDEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTVNVNNLKNNPVKPGSKK DQQNK+AESV SGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQ FSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITDEVAISHFVDG N NFDMKNSSSD+SLESVSDEVD+HDDELVSDE DDLDDELVSDEFDDQDDEFDEVEVGEGRNNLNAISEAEASTADIMEPRFKRAAAD IA TPLERIRALEQKLLARGKQQRVPKEQKGQKLER SNNKKKVVAKQNQQKVTKEQKVQKLDIPGSAKRLKIKEKAQLTG FSKYGLKTPSNSKEES Sbjct: 21 HFANGGSSSRSSHVRISENTATIFLASSLLPLSQSAHFPSLSVFPNIDFNRLRASAFNKGRKGSGGTTLFEMDGSDEDDDGDEFIDFDDEFDADGEDGDEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTVNVNNLKNNPVKPGSKKDDQQNKEAESVLSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQNFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITDEVAISHFVDGLNPNFDMKNSSSDISLESVSDEVDNHDDELVSDELDDLDDELVSDEFDDQDDEFDEVEVGEGRNNLNAISEAEASTADIMEPRFKRAAADSIASTPLERIRALEQKLLARGKQQRVPKEQKGQKLERVRSNNKKKVVAKQNQQKVTKEQKVQKLDIPGSAKRLKIKEKAQLTGVFSKYGLKTPSNSKEES 503
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A061E6U3_THECC (RNA-binding family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_010219 PE=4 SV=1) HSP 1 Score: 418.698 bits (1075), Expect = 1.092e-130 Identity = 303/496 (61.09%), Postives = 336/496 (67.74%), Query Frame = -3 Query: 1762 FTPLHFANGGSSSRSYHAHIPKNTA---------TIFXXXXXXXXXXSAHFPSLSVFPNIDSNRLRASAFNKGRKXXXXXTLFEMGGSXXXXXXXXXXXXXXXXXXXXXXXXEAMFLPLGKMKKWLENKPRGFGEGKVYDTSIEEKLLEEIEQSRQAQTXXXXXXXXXXXXPGSKKGDQQNKKAESVPSGIRVRVGNLPKKKNIHRDLKAAFDGVSGIINISPAVSGNKKTKDPVCKGFAFVEFKHEVDAIRFVQIFSGHNLTFGRIQKQIKCEMINSLSHSPAHEELWDNGSITDEVAISHFVDGPNANFDMKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEGRNNLNAISEAEASTADIMEPRFKRAAADLIALTPLERIRALEQKLLARGKQQRVPKEQKGQKLERFGSXXXXXXXXXXXXXXXXXXXXXXKLDIPGSAKRLKIKEKAQLTGAFSKYGLKTPSNSKEES 3222 FT LH +G ++ H+ KNTA IF SS L Q H LSVFPN DSN+LRASAFNKG+ GG L+EM SD + + + F D DD+ + MFLP GKMKKWLENKPRGFGEGKVYDTSIE+KLLEEIEQSRQAQ VNVNNLKNNPVK GSKK AE VPSG+RVRV NLPKKKNIHRDLKAAF+GVSGIINISPAVSGNKKTKDPVCKGFAFV+FK EVDA RFVQ FSGHN+ FGRIQKQIKCEM+NS+S +PAHEEL D SIT EVA+ D P+ +FDM DDQD+EFD VE GEGR+NLN ISE+ S D AAD ++ LERIRALEQKL+ARGKQQ VPKEQKGQKLER +KK +AK Q+K KEQ+VQKLDIPGSAKRLKIKEKA LTG FSKYGLKT KEES Sbjct: 18 FTSLHHGSGSAN----HSIKQKNTAFSLSFPFRRAIFASSLPPLSQQ-THLTFLSVFPNKDSNKLRASAFNKGKNGGTT--LYEMDRSDGEEEDEFFDFDDGLDGGDDDCDE-GMFLPFGKMKKWLENKPRGFGEGKVYDTSIEDKLLEEIEQSRQAQVVNVNNLKNNPVKSGSKK------VAEVVPSGVRVRVVNLPKKKNIHRDLKAAFNGVSGIINISPAVSGNKKTKDPVCKGFAFVDFKREVDATRFVQNFSGHNIMFGRIQKQIKCEMMNSVSQNPAHEELSDKDSITPEVAVPGLGDCPDTDFDMN-------------------------------ISCSDLSLDDQDEEFDRVEQGEGRDNLNVISESGPSNGD-------ERAADSMSSNRLERIRALEQKLIARGKQQGVPKEQKGQKLERI-RGIEKKPLAKGKQKKDPKEQQVQKLDIPGSAKRLKIKEKALLTGVFSKYGLKTALTWKEES 460
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0D2PC93_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G149200 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.119e-78 Identity = 90/161 (55.90%), Postives = 92/161 (57.14%), Query Frame = 3 Query: 819 CHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 C ++ EPVLPGCFLRARALGLMPMIDQ GEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFED KKNENKEVAVNDILPVNTAIEAIQYSM Sbjct: 98 CLVIMQEPVLPGCFLRARALGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDY------------------------------------KKNENKEVAVNDILPVNTAIEAIQYSM 193 HSP 2 Score: 81.2629 bits (199), Expect = 2.119e-78 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ Sbjct: 67 KVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 103 HSP 3 Score: 80.1073 bits (196), Expect = 2.119e-78 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 232 MSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIGT 342 MSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG+ Sbjct: 1 MSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIGS 37 HSP 4 Score: 53.1434 bits (126), Expect = 2.119e-78 Identity = 33/64 (51.56%), Postives = 33/64 (51.56%), Query Frame = 3 Query: 369 GSEAPTVFNCVSLY*LDMEMAKFPCMHY*LFGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 GSEAPTVFNCV VEISKGSKVKYELDKKTGMIKV Sbjct: 36 GSEAPTVFNCV-------------------------------VEISKGSKVKYELDKKTGMIKV 68
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0D2PSY9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G150500 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.825e-66 Identity = 83/174 (47.70%), Postives = 91/174 (52.30%), Query Frame = 3 Query: 819 CHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM--YASSLKECHHR 1334 C ++ EPVLPGCFLRARALGLMPMIDQ GEKDDKIIAVC DDPEYKH+TDIKDLPPHRLTEIRRFFED KKNENKEVAV+ LP A+EA+QYSM YA + + R Sbjct: 111 CLVIMQEPVLPGCFLRARALGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHYTDIKDLPPHRLTEIRRFFEDY------------------------------------KKNENKEVAVDKFLPATAAVEAVQYSMDLYAEYIMQTLRR 219 HSP 2 Score: 79.337 bits (194), Expect = 3.825e-66 Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCEDNDP+DCLVIMQ Sbjct: 80 KVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDCLVIMQ 116 HSP 3 Score: 62.3882 bits (150), Expect = 3.825e-66 Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 226 KRMSESTEAPR--PRLNERILSAMSKRSVAAHPWHDLEIGTTY-----CNICCVQDL 375 K ++ E PR PRLNERILS+MS+RSVAAHPWHDLEIG CNI V ++ Sbjct: 6 KNEAKVVETPRKPPRLNERILSSMSRRSVAAHPWHDLEIGPGAPAIFNCNILKVVEI 62 HSP 4 Score: 47.3654 bits (111), Expect = 3.825e-66 Identity = 22/28 (78.57%), Postives = 26/28 (92.86%), Query Frame = 3 Query: 477 CSTVQVVEISKGSKVKYELDKKTGMIKV 560 C+ ++VVEI KGSKVKYELDKKTG+IKV Sbjct: 54 CNILKVVEIPKGSKVKYELDKKTGLIKV 81
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: V4L668_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10028951mg PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.027e-65 Identity = 79/155 (50.97%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVC DDPEYKH+TDIK+LPPHRL+EIRRFFED KKNENKEVAVND LP A+EAIQYSM Sbjct: 118 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDY------------------------------------KKNENKEVAVNDFLPNGPAVEAIQYSM 207 HSP 2 Score: 76.6406 bits (187), Expect = 3.027e-65 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDP+D LVIMQ Sbjct: 81 KVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVIMQ 117 HSP 3 Score: 63.5438 bits (153), Expect = 3.027e-65 Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 1 Query: 208 SGKNKIKRMSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 +++ + SE + P PRLNERILS++S+RSVAAHPWHDLEIG Sbjct: 7 KNQSEKENQSEKLQRPTPRLNERILSSLSRRSVAAHPWHDLEIG 50 HSP 4 Score: 45.0542 bits (105), Expect = 3.027e-65 Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P V+EISKGSKVKYELDKKTG+IKV Sbjct: 49 IGPGAPVIFNVVIEISKGSKVKYELDKKTGLIKV 82
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: V4U1L6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024641mg PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 3.211e-65 Identity = 80/155 (51.61%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEYKH+TDIK+LPPHRLTEIRRFFED KKNENK+VAVN+ LP +TA+EAIQYSM Sbjct: 148 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYKHYTDIKELPPHRLTEIRRFFEDY------------------------------------KKNENKKVAVNEFLPTSTAVEAIQYSM 237 HSP 2 Score: 75.0998 bits (183), Expect = 3.211e-65 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDR+LYSSVVYPHNYGFIPRTLCEDNDP+D LV+MQ Sbjct: 111 KVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQ 147 HSP 3 Score: 62.003 bits (149), Expect = 3.211e-65 Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 202 FYSGKNKIKRMSEST---EAPRPRLNERILSAMSKRSVAAHPWHDLEIGTTYCNI--CCVQDLK 378 F S + I +MSE P+LNERILS++S+RSVAAHPWHDLEIG N+ C V+ K Sbjct: 32 FISDSSSIFKMSEEAANVSRSAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPNVFNCVVEITK 95 HSP 4 Score: 44.669 bits (104), Expect = 3.211e-65 Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3 Query: 492 VVEISKGSKVKYELDKKTGMIKV 560 VVEI+KGSKVKYELDKKTG+IKV Sbjct: 90 VVEITKGSKVKYELDKKTGLIKV 112
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: U5DH94_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00064p00191050 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.484e-65 Identity = 86/178 (48.31%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 807 MDYLCHMLE*EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM--YASSLKECHHR 1334 MD L M E PVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVCADDPEY+H+TDIK+LPPHRL EIRRFFED KKNENKEVAVND LP A EAIQYSM YA+ + + R Sbjct: 106 MDVLVLMQE--PVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCADDPEYRHYTDIKELPPHRLQEIRRFFEDY------------------------------------KKNENKEVAVNDFLPSTAAYEAIQYSMNLYATYILQSLRR 216 HSP 2 Score: 77.0258 bits (188), Expect = 3.484e-65 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDPMD LV+MQ Sbjct: 77 KVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQ 113 HSP 3 Score: 63.1586 bits (152), Expect = 3.484e-65 Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 1 Query: 208 SGKNKIKRMSESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 KN + M ES + P PRLNERILS++S+RSVAAHPWHDL+IG Sbjct: 4 GSKNGLSAM-ESEKRPTPRLNERILSSLSRRSVAAHPWHDLDIG 46 HSP 4 Score: 45.0542 bits (105), Expect = 3.484e-65 Identity = 23/34 (67.65%), Postives = 24/34 (70.59%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEI KGSKVKYELDKKTG+IKV Sbjct: 45 IGPGAPSVVNCVVEIGKGSKVKYELDKKTGLIKV 78
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: A0A0D3AS94_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.544e-65 Identity = 80/155 (51.61%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVC DDPEYKH+TDIK+LPPHRLTEIRRFFED KKNENKEVAVND LP A+EAIQYSM Sbjct: 112 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHYTDIKELPPHRLTEIRRFFEDY------------------------------------KKNENKEVAVNDFLPNGPAVEAIQYSM 201 HSP 2 Score: 76.6406 bits (187), Expect = 3.544e-65 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDP+D LVIMQ Sbjct: 75 KVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVIMQ 111 HSP 3 Score: 62.3882 bits (150), Expect = 3.544e-65 Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 235 SESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 S + P PRLNERILS++SKRSVAAHPWHDLEIG Sbjct: 10 SGKLQKPTPRLNERILSSLSKRSVAAHPWHDLEIG 44 HSP 4 Score: 45.4394 bits (106), Expect = 3.544e-65 Identity = 24/34 (70.59%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEISKGSKVKYELDKKTG+IKV Sbjct: 43 IGPGAPVIFNVVVEISKGSKVKYELDKKTGLIKV 76
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Match: M4CWF4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra008551 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.544e-65 Identity = 80/155 (51.61%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 837 EPVLPGCFLRARALGLMPMIDQVFH*SSKKLTFSDFFPRVCVINYFIVVTQGEKDDKIIAVCADDPEYKHFTDIKDLPPHRLTEIRRFFEDCILFQLKPYNSFVCLMKQHYILLPNVRKY*FPNHFTDKKNENKEVAVNDILPVNTAIEAIQYSM 1301 EPVLPGCFLRARA+GLMPMIDQ GEKDDKIIAVC DDPEYKH+TDIK+LPPHRLTEIRRFFED KKNENKEVAVND LP A+EAIQYSM Sbjct: 112 EPVLPGCFLRARAIGLMPMIDQ-----------------------------GEKDDKIIAVCVDDPEYKHYTDIKELPPHRLTEIRRFFEDY------------------------------------KKNENKEVAVNDFLPNGPAVEAIQYSM 201 HSP 2 Score: 76.6406 bits (187), Expect = 3.544e-65 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 646 QVDRILYSSVVYPHNYGFIPRTLCEDNDPMDCLVIMQ 756 +VDRILYSSVVYPHNYGFIPRTLCEDNDP+D LVIMQ Sbjct: 75 KVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVIMQ 111 HSP 3 Score: 62.3882 bits (150), Expect = 3.544e-65 Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 235 SESTEAPRPRLNERILSAMSKRSVAAHPWHDLEIG 339 S + P PRLNERILS++SKRSVAAHPWHDLEIG Sbjct: 10 SGKLQKPTPRLNERILSSLSKRSVAAHPWHDLEIG 44 HSP 4 Score: 45.4394 bits (106), Expect = 3.544e-65 Identity = 24/34 (70.59%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 459 FGCWIPCSTVQVVEISKGSKVKYELDKKTGMIKV 560 G P VVEISKGSKVKYELDKKTG+IKV Sbjct: 43 IGPGAPVIFNVVVEISKGSKVKYELDKKTGLIKV 76 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097170 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097170 ID=g.barbadense_cottongen_reftransV1_0097170; Name=g.barbadense_cottongen_reftransV1_0097170; organism=Gossypium barbadense; type=contig; length=3431bpback to top |