g.barbadense_cottongen_reftransV1_0097136, g.barbadense_cottongen_reftransV1_0097136 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 5.008e-52 Identity = 108/178 (60.67%), Postives = 130/178 (73.03%), Query Frame = -1 Query: 1102 STNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHFYCSLC 1635 S N EG+ALH LR L DP NVLQSWDPTLVNPCTWFHVTC++ N VIR+DLGN+ +SG L PEL L++LQY ELY N+I+G IP LGNL NLV LDLY N F G IP+S L LRFLRLNNN+LTGSIP LT ++ L+V D+SNN L G++P +G F +F+ + LC Sbjct: 25 SANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLC 202
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 5.044e-52 Identity = 106/178 (59.55%), Postives = 132/178 (74.16%), Query Frame = -1 Query: 1102 STNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHFYCSLC 1635 S+N EG+ALH+LR L DP NVLQSWDPTLVNPCTWFHVTC++ N VIR+DLGN+++SG L P+L QL++LQY ELY N+I+G +P +LGNL NLV LDLY N F G IP S L LRFLRLNNN+LTG IP LT + L+V D+SNN L G++P +G F +F+ + LC Sbjct: 28 SSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLC 205
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 1.698e-49 Identity = 102/168 (60.71%), Postives = 126/168 (75.00%), Query Frame = -1 Query: 1135 ISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFS 1638 +S N+EG+AL AL+ L+DP VLQSWD TLV PCTWFHVTC+S N V R+DLGN+N+SG L +L QL +LQY ELY N+I+G IP++LGNL LV LDLY N G IP + LK LRFLRLNNN+L+G IPR LTA+ L+V D+SNN L G IPV+G F +F+ Sbjct: 23 VSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFT 190
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 2.700e-45 Identity = 101/171 (59.06%), Postives = 124/171 (72.51%), Query Frame = -1 Query: 1135 ISTNSEGNALHALRRRLS--DPTN-VLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFS 1638 ++ N+EG+AL L+ LS DP N VLQSWD TLV PCTWFHVTC+ N V R+DLGN+ +SG L PEL QL +LQY ELY N+I+GEIP+ELG+L LV LDLY N G IP S L LRFLRLNNN+L+G IP LT++ L+V D+SNN L G IPV+G F +F+ Sbjct: 27 VAGNAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSV-QLQVLDISNNRLSGDIPVNGSFSLFT 196
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 4.616e-42 Identity = 95/171 (55.56%), Postives = 121/171 (70.76%), Query Frame = -1 Query: 1135 ISTNSEGNALHALRRRLSD---PTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFS 1638 ++ ++ +AL ALR LS N+LQSW+ T V PC+WFHVTC++ N V RLDLG++N+SG L P+LAQL +LQY EL+ N+I+GEIP+ELG+L LV LDL+ N G IP S L LRFLRL NN+L+G IPR LTAL L V D+SNN L G IPV+G F F+ Sbjct: 22 VTGKTQVDALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTALP-LDVLDISNNRLSGDIPVNGSFSQFT 191
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.925e-24 Identity = 74/174 (42.53%), Postives = 100/174 (57.47%), Query Frame = -1 Query: 1117 ISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHF 1638 +S +++G+AL ALR L N L W+ VNPCTW V CD N V L L + N SGTL + L++L+ L N I+GEIP++ GNL +L LDL N+ G IP + LK L+FL L+ N L G+IP LT L NL + +N L G IP +F +P+Y+F Sbjct: 25 VSPDAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQ----SLFEIPKYNF 194
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: NIK1_ARATH (Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.072e-24 Identity = 71/157 (45.22%), Postives = 95/157 (60.51%), Query Frame = -1 Query: 1162 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1632 N E AL ++ L DP VL +WD V+PC+W VTC S N VI L + N+SGTL P + L +L+ L N+I G+IP E+G L L LDL N F GEIP S L+SL++LRLNNN+L+G P L+ ++ L D+S N+L G +P Sbjct: 38 VNFEVQALMDIKASLHDPHGVLDNWDRDAVDPCSWTMVTCSSENFVIGLGTPSQNLSGTLSPSITNLTNLRIVLLQNNNIKGKIPAEIGRLTRLETLDLSDNFFHGEIPFSVGYLQSLQYLRLNNNSLSGVFPLSLSNMTQLAFLDLSYNNLSGPVP 194
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: NIK3_ARATH (Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana GN=NIK3 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.487e-23 Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = -1 Query: 1162 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1632 N E AL A++ L+DP VL++WD V+PC+W V+C + +V LDL + ++SGTL P + L +LQ L N I+G IP+ +G L+ L LDL N F GEIP S LK+L +LRLNNN+L G+ P L+ + L + D+S N+L G++P Sbjct: 32 VNYEVTALVAVKNELNDPYKVLENWDVNSVDPCSWRMVSC-TDGYVSSLDLPSQSLSGTLSPRIGNLTYLQSVVLQNNAITGPIPETIGRLEKLQSLDLSNNSFTGEIPASLGELKNLNYLRLNNNSLIGTCPESLSKIEGLTLVDISYNNLSGSLP 187
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: NIK2_ARATH (Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana GN=NIK2 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.226e-23 Identity = 70/157 (44.59%), Postives = 97/157 (61.78%), Query Frame = -1 Query: 1162 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1632 N E AL ++ L+DP VL +WD T V+PC+W +TC S VIRL+ + N+SGTL + L +LQ L N I+G IP E+G L L LDL N F G+IP + S K+L++LR+NNN+LTG+IP L ++ L D+S N+L G +P Sbjct: 39 VNFEVVALIGIKSSLTDPHGVLMNWDDTAVDPCSWNMITC-SDGFVIRLEAPSQNLSGTLSSSIGNLTNLQTVLLQNNYITGNIPHEIGKLMKLKTLDLSTNNFTGQIPFTLSYSKNLQYLRVNNNSLTGTIPSSLANMTQLTFLDLSYNNLSGPVP 194
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Match: Y4052_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana GN=At4g30520 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.123e-22 Identity = 68/156 (43.59%), Postives = 93/156 (59.62%), Query Frame = -1 Query: 1162 NSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIP 1629 N E AL ++R L DP L +WD V+PC+W +TC N VI L + ++SG L + L +L+ L N+ISG+IP ELG L L LDL NRF G+IP S L SL++LRLNNN+L+G P L+ + +L D+S N+L G +P Sbjct: 35 NPEVEALISIRNNLHDPHGALNNWDEFSVDPCSWAMITCSPDNLVIGLGAPSQSLSGGLSESIGNLTNLRQVSLQNNNISGKIPPELGFLPKLQTLDLSNNRFSGDIPVSIDQLSSLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLSGPVP 190
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A0D2TV04_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020900 PE=4 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 2.255e-112 Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = -1 Query: 1102 MAPLAVIXXXXXXXXXXXXPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHFYCSLC 1701 MAPL+VISLSLCFLLPLLSPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFH+TCDS+NHVIRLDLGNSNISGTLGPELAQLQHLQY ELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSLRFLRLNNNNLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHFYCSLC Sbjct: 1 MAPLSVISLSLCFLLPLLSPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHITCDSNNHVIRLDLGNSNISGTLGPELAQLQHLQYLELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSLRFLRLNNNNLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYHFYCSLC 200
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A0D2TV00_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020900 PE=4 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 1.491e-104 Identity = 188/193 (97.41%), Postives = 191/193 (98.96%), Query Frame = -1 Query: 1123 MAPLAVIXXXXXXXXXXXXPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRY 1701 MAPL+VISLSLCFLLPLLSPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFH+TCDS+NHVIRLDLGNSNISGTLGPELAQLQHLQY ELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSLRFLRLNNNNLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMP Y Sbjct: 1 MAPLSVISLSLCFLLPLLSPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHITCDSNNHVIRLDLGNSNISGTLGPELAQLQHLQYLELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSLRFLRLNNNNLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPSY 193
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A0D2PLZ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020900 PE=4 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.169e-101 Identity = 187/193 (96.89%), Postives = 190/193 (98.45%), Query Frame = -1 Query: 1123 MAPLAVIXXXXXXXXXXXXPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRY 1701 MAPL+VISLSLCFLLPLLSPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFH+TCDS+NHVIRLDLGNSNISGTLGPELAQLQHLQ ELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSLRFLRLNNNNLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMP Y Sbjct: 1 MAPLSVISLSLCFLLPLLSPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHITCDSNNHVIRLDLGNSNISGTLGPELAQLQHLQ--ELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSLRFLRLNNNNLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPSY 191
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A061E0C6_THECC (Leucine-rich repeat family protein OS=Theobroma cacao GN=TCM_007197 PE=4 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 4.946e-90 Identity = 153/170 (90.00%), Postives = 160/170 (94.12%), Query Frame = -1 Query: 1132 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSM 1641 AISTNSEGNALHALR RLSDPTNVLQSWDPTLVNPCTWFHVTCDS+NHVIRLDLGNSNISG LGPEL QLQHLQY ELYKNDI G+IPKELGNLK+LVG+DLYGN+FEGEIPKSF+ LKSLRFLRLNNN LTGSIPRELT L NLKVFDVSNNDLCGTIPVDGPF MFS+ Sbjct: 133 AISTNSEGNALHALRSRLSDPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGILGPELGQLQHLQYLELYKNDIRGKIPKELGNLKDLVGMDLYGNKFEGEIPKSFAKLKSLRFLRLNNNKLTGSIPRELTTLLNLKVFDVSNNDLCGTIPVDGPFSMFSL 302
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: W9R971_9ROSA (Somatic embryogenesis receptor kinase 1 OS=Morus notabilis GN=L484_011518 PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.188e-87 Identity = 146/173 (84.39%), Postives = 160/173 (92.49%), Query Frame = -1 Query: 1123 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRY 1641 A+STNSEGNALHALR +LSDPTNVLQSWDPTLVNPCTWFHVTCDS++HVIRLDLGNSNISGTLGPEL +L+HLQY ELY+NDISG IPKELGNLKNL+G+DLY N+FEGEIPKSF+ LKSL+FLRLNNN LTGSIPRELT LSNLKVFDVS+NDLCGTIPVDGPF F M + Sbjct: 22 ALSTNSEGNALHALRSKLSDPTNVLQSWDPTLVNPCTWFHVTCDSNSHVIRLDLGNSNISGTLGPELGKLKHLQYLELYRNDISGRIPKELGNLKNLIGMDLYDNKFEGEIPKSFAKLKSLKFLRLNNNKLTGSIPRELTTLSNLKVFDVSSNDLCGTIPVDGPFTTFPMESF 194
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A0A0K4G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071480 PE=4 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.827e-86 Identity = 144/173 (83.24%), Postives = 156/173 (90.17%), Query Frame = -1 Query: 1123 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRY 1641 ISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDS NHVIRLDLGNSNISGTLGPE+ LQHLQY ELY+N +SG+IP ELGNLKNLV +DLY N+FEG+IPKSF+ L+SLRFLR+NNN LTGSIPREL +LS LK+FDVSNNDLCGTIPVDGPF FSM Y Sbjct: 20 VISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDNHVIRLDLGNSNISGTLGPEIGDLQHLQYLELYRNGLSGKIPTELGNLKNLVSMDLYENKFEGKIPKSFAKLESLRFLRMNNNKLTGSIPRELASLSKLKIFDVSNNDLCGTIPVDGPFATFSMESY 192
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: M5VIS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb009520mg PE=4 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 6.637e-86 Identity = 154/194 (79.38%), Postives = 171/194 (88.14%), Query Frame = -1 Query: 1120 MAPLAVIXXXXXXXXXXXXPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1701 MAPL+++S L FLL + A STNSEGNALHALR RL+D TNVLQSWDPTLVNPCTWFHVTCDS+NHVIRLDLGNSNISG+LGPEL +L+HLQY ELY+NDISG+IP ELG LK+LV +DLY NRFEG+IPKSFS LKSLRFLRLNNN LTGSIPREL +LS+LKVFDVSNNDLCGTIPVDGPFG FSM + Sbjct: 1 MAPLSIVSSFLTFLLCISP-AFSTNSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIPVDGPFGTFSMESFE 193
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: B9GHW1_POPTR (Putative leucine-rich repeat family protein OS=Populus trichocarpa GN=POPTR_0001s30370g PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 7.939e-86 Identity = 144/174 (82.76%), Postives = 157/174 (90.23%), Query Frame = -1 Query: 1120 AISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1641 ++STNSEGNALHALR RLSDPTNVLQSWDPTLVNPCTWFHVTCDS NHV RLDLGNSNISGTLGPEL +L+HL+Y ELY+NDI G+IPKELGNLKNLV +D+YGNRFEGEIPKSF+ LKSLRFLRLNNN L+GSIPRELT L +LKVFDVSNNDLCGTIPVDGPF F M + Sbjct: 20 SLSTNSEGNALHALRSRLSDPTNVLQSWDPTLVNPCTWFHVTCDSSNHVTRLDLGNSNISGTLGPELGELRHLKYLELYRNDIGGKIPKELGNLKNLVSMDMYGNRFEGEIPKSFAKLKSLRFLRLNNNKLSGSIPRELTTLKDLKVFDVSNNDLCGTIPVDGPFTSFPMESFE 193
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: A0A0D2SSU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020900 PE=4 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.295e-85 Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = -1 Query: 1198 MAPLAVIXXXXXXXXXXXXPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVF 1701 MAPL+VISLSLCFLLPLLSPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFH+TCDS+NHVIRLDLGNSNISGTLGPELAQLQHLQY ELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSLRFLRLNNNNLTGSIPRELTALSNLKV Sbjct: 1 MAPLSVISLSLCFLLPLLSPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHITCDSNNHVIRLDLGNSNISGTLGPELAQLQHLQYLELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSLRFLRLNNNNLTGSIPRELTALSNLKVL 168
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Match: B9SNC0_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0174740 PE=4 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 5.750e-85 Identity = 144/171 (84.21%), Postives = 154/171 (90.06%), Query Frame = -1 Query: 1120 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSHNHVIRLDLGNSNISGTLGPELAQLQHLQYFELYKNDISGEIPKELGNLKNLVGLDLYGNRFEGEIPKSFSGLKSXXXXXXXXXXLTGSIPRELTALSNLKVFDVSNNDLCGTIPVDGPFGMFSMPRYH 1632 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDS+NHVIRLDLGNSNISGTLGPEL QLQHLQY ELY+N+I G+IPKELGNLKNLV +DLY N+FEG IPK+ + LKSLRFLRLNNN LTGSIPRELT L +LKVFDVSNNDLCGTIPVDGPF F M + Sbjct: 23 TNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGTLGPELGQLQHLQYLELYRNEIGGKIPKELGNLKNLVSMDLYENKFEGRIPKTLAKLKSLRFLRLNNNKLTGSIPRELTTLKDLKVFDVSNNDLCGTIPVDGPFSTFPMESFE 193 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097136 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097136 ID=g.barbadense_cottongen_reftransV1_0097136; Name=g.barbadense_cottongen_reftransV1_0097136; organism=Gossypium barbadense; type=contig; length=2172bpback to top |