g.barbadense_cottongen_reftransV1_0096985, g.barbadense_cottongen_reftransV1_0096985 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0096985
Unique Nameg.barbadense_cottongen_reftransV1_0096985
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2125
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At04chromosomeg.barbadense_cottongen_reftransV1_0096985:1..2099 .
At04:53364400..53375208 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_BOVIN (tRNA-specific adenosine deaminase 2 OS=Bos taurus GN=DEADC1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.467e-28
Identity = 70/146 (47.95%), Postives = 95/146 (65.07%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPK 1556
            C+++ + E++  GRN   +T+NATR+AEM AID  L+  +R G S +EV   F   +LYVT EPCIMCAAAL  + I  V YGC NE+FGGCGS+L + S+         +P  G  F+CT G  A EA+ + ++FY+Q NPNAPK
Sbjct:   46 CLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWCRRRGRSPSEV---FEHTVLYVTVEPCIMCAAALRLMRIPLVVYGCQNERFGGCGSVLDIASA--------DLPSTGKPFQCTPGYRAEEAVEMLKTFYKQENPNAPK 180          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_DANRE (tRNA-specific adenosine deaminase 2 OS=Danio rerio GN=adat2 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.797e-27
Identity = 72/151 (47.68%), Postives = 96/151 (63.58%), Query Frame = 3
Query: 1113 LSTSCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPKP 1559
            +   C+++ + E+I  GRN   ET+NATR+AEM A+D +L+ W R  L + +  +   Q +LYVT EPCIMCAAAL  L I  V YGC NE+FGGCGS+L +         SD +P  G  FKC  G  A EA+ + ++FY+Q NPNAPKP
Sbjct:   41 VPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD-WCR--LREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVS--------SDHLPHTGTSFKCIAGYRAEEAVEMLKTFYKQENPNAPKP 180          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_HUMAN (tRNA-specific adenosine deaminase 2 OS=Homo sapiens GN=ADAT2 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.049e-27
Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ--RGFKCTGGLMASEAISLFRSFYEQGNPNAPK 1556
            C+++ + E++  GRN   +T+NATR+AEM AID +L+  ++ G S +EV   F   +LYVT EPCIMCAAAL  + I  V YGC NE+FGGCGS+L++ S+         +P   R F+C  G  A EA+ + ++FY+Q NPNAPK
Sbjct:   46 CLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASA--------DLPNTGRPFQCIPGYRAEEAVEMLKTFYKQENPNAPK 180          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_MOUSE (tRNA-specific adenosine deaminase 2 OS=Mus musculus GN=Adat2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.353e-27
Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = 3
Query: 1113 LSTSCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ--RGFKCTGGLMASEAISLFRSFYEQGNPNAPK 1556
            +   C+++ + E++  GRN   +T+NATR+AEM AID +L+   + G S + V   F   +LYVT EPCIMCAAAL  + I  V YGC NE+FGGCGS+L++ S+         +P   R F+C  G  A EA+ L ++FY+Q NPNAPK
Sbjct:   42 VPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCHQHGQSPSTV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASA--------DLPNTGRPFQCIPGYRAEEAVELLKTFYKQENPNAPK 180          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_XENTR (tRNA-specific adenosine deaminase 2 OS=Xenopus tropicalis GN=adat2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.409e-25
Identity = 70/155 (45.16%), Postives = 96/155 (61.94%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKK 1583
            C+++ D +++  GRN   ET+NATR+AEM AID +L+  +++     +V   F   +LYVT EPCIMCA AL  L I  V YGC NE+FGGCGS+L++          D +P  G  FK  GG  A +A+ L ++FY+Q NPNAP   R  V+KK
Sbjct:   29 CLMVYDNQVVGKGRNEVNETKNATRHAEMVAIDQVLDWCEKNSKKSRDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNV--------AGDNIPDTGTEFKYIGGYQAEKAVELLKTFYKQENPNAP---RSKVRKK 169          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_XENLA (tRNA-specific adenosine deaminase 2 OS=Xenopus laevis GN=adat2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.485e-25
Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPK 1556
            C+++   +++  GRN   ET+NAT++AEM AID +L+  + +     +V   F   +LYVT EPCIMCA AL  L I  V YGC NE+FGGCGS+L++          D +P  G  FKC GG  A +AI L ++FY+Q NPNAPK
Sbjct:   34 CLMVYGNQVVGKGRNEVNETKNATQHAEMVAIDQVLDWCEMNSKKSTDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVS--------GDDIPDTGTKFKCIGGYQAEKAIELLKTFYKQENPNAPK 168          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TAD2_SCHPO (tRNA-specific adenosine deaminase subunit tad2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tad2 PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 3.473e-20
Identity = 61/147 (41.50%), Postives = 81/147 (55.10%), Query Frame = 3
Query: 1122 SCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPH 1562
            SCV +  GE+I  G N T  + +  R+AE+ AI+ +LE +          A  F +  LYVT EPC+MCAAAL  L IK VY+GC N++FGGCGS+ S++         D+     +    GL  SEA+ L R FY Q N  AP P 
Sbjct:  240 SCVFVYKGEVIGRGFNETNCSLSGIRHAELIAIEKILEHYP---------ASVFKETTLYVTVEPCLMCAAALKQLHIKAVYFGCGNDRFGGCGSVFSIN--------KDQSIDPSYPVYPGLFYSEAVMLMREFYVQENVKAPVPQ 369          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TAD2_YEAST (tRNA-specific adenosine deaminase subunit TAD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAD2 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.845e-18
Identity = 55/140 (39.29%), Postives = 76/140 (54.29%), Query Frame = 3
Query: 1143 GELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSL-HSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKP 1559
            G+++A G N T ++     +AE   ID +  M    G     V   F    LYVT EPCIMCA+AL  L I  V +GC NE+FGG G++LS+ H +C+   +       G++   G++  EAI L R FY + N  APKP
Sbjct:   35 GQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAMLGSRG-----VVDVFKDITLYVTVEPCIMCASALKQLDIGKVVFGCGNERFGGNGTVLSVNHDTCT--LVPKNNSAAGYESIPGILRKEAIMLLRYFYVRQNERAPKP 167          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRP1 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M1 GN=tadA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.689e-10
Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538
            CVI+KDGE+I  G N   E+  A  +AEM AI+           +  E         L+VT EPC+MC+ A+    I  V YG +N+KFGG  S+  +        ++D+      +   GL+A++  ++ ++F+ QG
Sbjct:   32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRPQ (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=tadA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.735e-10
Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538
            CVI+KDGE+I  G N   E+  A  +AEM AI+           +  E         L+VT EPC+MC+ A+    I  V YG +N+KFGG  S+  +        ++D+      +   GL+A++  ++ ++F+ QG
Sbjct:   32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A0D2V4B3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G114300 PE=4 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 5.577e-88
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589
            CVIIKDGE+IA GRNRTTETRNATR+AEMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIK+VYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE
Sbjct:   29 CVIIKDGEVIASGRNRTTETRNATRHAEMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKEVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 183          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A0D2V5A2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G114300 PE=4 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 9.300e-81
Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 3
Query: 1209 MEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589
            MEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIK+VYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE
Sbjct:    1 MEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKEVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 127          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A061GQA4_THECC (Cytidine/deoxycytidylate deaminase family protein isoform 4 (Fragment) OS=Theobroma cacao GN=TCM_039450 PE=4 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 5.068e-68
Identity = 132/180 (73.33%), Postives = 146/180 (81.11%), Query Frame = 3
Query: 1071 EQNFNAIFFFSPYL------LSTSCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQR-GFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589
            +Q  N    F   L      +   CV IKDG++IA GRNRT ETRNATR+AEMEAID LLE WQRDGLSK++VA+ FS+CILYVTCEPCIMCAAALS LGIK+VYYGCANEKFGGCGSILSLHSS        +VPQR GFKCTGGL+ASEA+SLFRSFYEQGNPNAPKPHRPLVQK+VE
Sbjct:   34 QQTHNIFLIFQAKLALESLEVPVGCVFIKDGKVIASGRNRTNETRNATRHAEMEAIDILLEKWQRDGLSKSDVAETFSKCILYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHSSALSHL--SEVPQRKGFKCTGGLLASEAVSLFRSFYEQGNPNAPKPHRPLVQKEVE 211          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A061GS83_THECC (Cytidine/deoxycytidylate deaminase family protein isoform 1 OS=Theobroma cacao GN=TCM_039450 PE=4 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.703e-67
Identity = 128/156 (82.05%), Postives = 140/156 (89.74%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQR-GFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589
            CV IKDG++IA GRNRT ETRNATR+AEMEAID LLE WQRDGLSK++VA+ FS+CILYVTCEPCIMCAAALS LGIK+VYYGCANEKFGGCGSILSLHSS        +VPQR GFKCTGGL+ASEA+SLFRSFYEQGNPNAPKPHRPLVQK+VE
Sbjct:   49 CVFIKDGKVIASGRNRTNETRNATRHAEMEAIDILLEKWQRDGLSKSDVAETFSKCILYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHSSALSHL--SEVPQRKGFKCTGGLLASEAVSLFRSFYEQGNPNAPKPHRPLVQKEVE 202          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A067FEM3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029549mg PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.744e-61
Identity = 117/155 (75.48%), Postives = 139/155 (89.68%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFIS-DKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKV 1586
            CVI++DG++IA GRNRTTETRNATR+AEMEAID LL+ WQ++GLS++E+A+ FS+C LYVTCEPCIMCAAALS LGIK+VYYGCANEKFGGCGSILSLH S S+   S D + ++GFKCTGG+MASEA+SLFRSFYEQGNPNAPKPHRPLV + +
Sbjct:   36 CVILEDGKVIAAGRNRTTETRNATRHAEMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSDSKMLNSGDVLGRKGFKCTGGVMASEAVSLFRSFYEQGNPNAPKPHRPLVHQAM 190          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: V4UJZ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009594mg PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.744e-61
Identity = 117/155 (75.48%), Postives = 139/155 (89.68%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFIS-DKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKV 1586
            CVI++DG++IA GRNRTTETRNATR+AEMEAID LL+ WQ++GLS++E+A+ FS+C LYVTCEPCIMCAAALS LGIK+VYYGCANEKFGGCGSILSLH S S+   S D + ++GFKCTGG+MASEA+SLFRSFYEQGNPNAPKPHRPLV + +
Sbjct:   36 CVILEDGKVIAAGRNRTTETRNATRHAEMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSDSKMLNSGDVLGRKGFKCTGGVMASEAVSLFRSFYEQGNPNAPKPHRPLVHQAM 190          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: W9S8D4_9ROSA (tRNA-specific adenosine deaminase 2 OS=Morus notabilis GN=L484_005638 PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.751e-61
Identity = 115/156 (73.72%), Postives = 134/156 (85.90%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589
            CVIIKDG++I+ GRNRTTE RNATR+AEMEAID LL+ WQ  GLSK E+A++FS+CILYVTCEPCIMCA ALS LGI +V+YGCANEKFGGCGSILSLH   SE   S  +PQ +GFKC GG+MASEAISLFR FYEQGNPNAPKPHRP+V+++ +
Sbjct:   36 CVIIKDGKVISSGRNRTTEARNATRHAEMEAIDMLLDKWQERGLSKYEIAEHFSKCILYVTCEPCIMCATALSILGISEVFYGCANEKFGGCGSILSLHLGNSESHNSGGIPQGKGFKCRGGIMASEAISLFRGFYEQGNPNAPKPHRPVVRQETQ 191          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A0A0LZX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G425900 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.890e-60
Identity = 114/153 (74.51%), Postives = 128/153 (83.66%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKK 1583
            CVI++DG +IA GRNRTTETRNATR+AEMEAID L+E WQRDGLS +EVA  FS+C LYVTCEPCIMCA+ALS +GIK+VYYGCAN+KFGGCGSILSLH    E   S     RGFKCT G+MASEA+ LFRSFYEQGNPNAPKPHRPLV  +
Sbjct:   36 CVIVEDGMVIATGRNRTTETRNATRHAEMEAIDILIEAWQRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSIIGIKEVYYGCANDKFGGCGSILSLHLGSGEAPTSGNGLGRGFKCTAGIMASEAVGLFRSFYEQGNPNAPKPHRPLVNHQ 188          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: M1C3V5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022976 PE=4 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.236e-59
Identity = 111/153 (72.55%), Postives = 133/153 (86.93%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSE-PFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580
            CV ++DGE+IA GRNRTTETRNATR+AEMEAID L++ WQ++GLS  EV++ FS+CIL+VTCEPCIMCAAALS+LGIK+ YYGCAN+KFGGCGS+LSLH+S S  P       ++GFKCTGG+MASEA+SL RSFYEQGNPNAPKPHRPL Q+
Sbjct:   32 CVFVEDGEVIASGRNRTTETRNATRHAEMEAIDFLVQQWQKNGLSPLEVSERFSKCILFVTCEPCIMCAAALSYLGIKEAYYGCANDKFGGCGSVLSLHTSSSNLPTSELASSKKGFKCTGGIMASEAVSLLRSFYEQGNPNAPKPHRPLKQQ 184          
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: K4CBY4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc07g008650.2 PE=4 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 7.995e-59
Identity = 111/153 (72.55%), Postives = 132/153 (86.27%), Query Frame = 3
Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSE-PFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580
            CV ++DGE+IA GRNRTTETRNATR+AEMEAID L++ WQ++GLS  EV++ FS+C LYVTCEPCIMCAAALS+LGIK+ YYGCAN+KFGGCGS+LSLH+S S  P       ++GFKCTGG+MASEA+SL RSFYEQGNPNAPKPHRPL Q+
Sbjct:   59 CVFVEDGEVIASGRNRTTETRNATRHAEMEAIDFLVQQWQKNGLSPLEVSERFSKCTLYVTCEPCIMCAAALSYLGIKEAYYGCANDKFGGCGSVLSLHTSNSNLPTSELASSKKGFKCTGGIMASEAVSLLRSFYEQGNPNAPKPHRPLKQQ 211          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 13
Match NameE-valueIdentityDescription
ADAT2_BOVIN2.467e-2847.95tRNA-specific adenosine deaminase 2 OS=Bos taurus ... [more]
ADAT2_DANRE2.797e-2747.68tRNA-specific adenosine deaminase 2 OS=Danio rerio... [more]
ADAT2_HUMAN3.049e-2746.58tRNA-specific adenosine deaminase 2 OS=Homo sapien... [more]
ADAT2_MOUSE8.353e-2745.33tRNA-specific adenosine deaminase 2 OS=Mus musculu... [more]
ADAT2_XENTR2.409e-2545.16tRNA-specific adenosine deaminase 2 OS=Xenopus tro... [more]
ADAT2_XENLA2.485e-2545.89tRNA-specific adenosine deaminase 2 OS=Xenopus lae... [more]
TAD2_SCHPO3.473e-2041.50tRNA-specific adenosine deaminase subunit tad2 OS=... [more]
TAD2_YEAST6.845e-1839.29tRNA-specific adenosine deaminase subunit TAD2 OS=... [more]
TADA_STRP11.689e-1031.88tRNA-specific adenosine deaminase OS=Streptococcus... [more]
TADA_STRPQ1.735e-1031.88tRNA-specific adenosine deaminase OS=Streptococcus... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2V4B3_GOSRA5.577e-8897.42Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2V5A2_GOSRA9.300e-8199.21Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061GQA4_THECC5.068e-6873.33Cytidine/deoxycytidylate deaminase family protein ... [more]
A0A061GS83_THECC1.703e-6782.05Cytidine/deoxycytidylate deaminase family protein ... [more]
A0A067FEM3_CITSI1.744e-6175.48Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4UJZ5_9ROSI1.744e-6175.48Uncharacterized protein OS=Citrus clementina GN=CI... [more]
W9S8D4_9ROSA9.751e-6173.72tRNA-specific adenosine deaminase 2 OS=Morus notab... [more]
A0A0A0LZX4_CUCSA9.890e-6074.51Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
M1C3V5_SOLTU4.236e-5972.55Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K4CBY4_SOLLC7.995e-5972.55Uncharacterized protein OS=Solanum lycopersicum GN... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10coord: 2..126
e-value: 6.0E-35
score: 119.8
NoneNo IPR availablePANTHERPTHR11079CYTOSINE DEAMINASEcoord: 2..133
NoneNo IPR availablePANTHERPTHR11079:SF92TRNA-SPECIFIC ADENOSINE DEAMINASE 2coord: 2..133
IPR002125Cytidine and deoxycytidylate deaminases, zinc-bindingPFAMPF00383dCMP_cyt_deam_1coord: 2..72
e-value: 1.7E-10
score: 40.5
IPR002125Cytidine and deoxycytidylate deaminases, zinc-bindingPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 1..92
score: 17.273
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 2..130

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0096985 ID=g.barbadense_cottongen_reftransV1_0096985; Name=g.barbadense_cottongen_reftransV1_0096985; organism=Gossypium barbadense; type=contig; length=2125bp
ATGGAAAGTGATAATCTTGCATACATGGAACTTGCAATTCACCAGGCAAA
ACTTGCTTCGGAAAGCCTTGAAGTGCCTGTTGGGTAATTATTAACCTCAT
AAATTTCGTTTCTCCCTTAACCAACCTTCTCCATTTATTGGATGAAAATA
TGAATTTAGCTTCTCTTTTGTTACTAATGTAGATTGGCATTGCTTTGCAC
GACCTGGGAAAAAAAACTAAAAATGTTATATGAAGTACAACACGACACAA
ATACATAAAGATTCCAAAATCTATATAACAGAAATTATGAACTTATTAGG
TTGGTTATAACCTATATAATTAACATTATTAGGATTTAGAAACACTTGAA
AAAGTTTTGAGTTGAGGAATTGTACTGAATTTGGTGTTATGATTAATATG
TTTGGATGAAATCTGCTTGCAATGGTAGACATAAAGAAATATACTAAGGT
GAACAAAGAGCTGAAATACCCTAAAAGGTTTATGAGGACCTATTTATAGT
ACATTCCATAGGATTAAAAATGGAAATCTGTAATAACTTAAACAGATTCT
AAACAATGTAATTATTGCCTTCAAGGTTCACCTAATTTGAACATTTAAAT
TAAAAAGAAAAGAAGTAATGGCTTTTCCGACGGGTGCATTAGTTCTACCT
AGAAGATTGCAAAATTTAATGACACAAAGATTTGACCAATAAAAAGAACA
AGATATAAACTTAAGACTAAAATAAAATAGCATTGTCAAGCACATAATTA
TTTTTTTGGTCTCATGATTAATCTATAAATCAAAATATCACTAAGTTCTT
GGTCTTCATTGGTTGCACCATGTCATTGACTCGTGGGTTAAGTTTTATAT
TGTTGTGTGTTAAAGCATAAGCGATTGTTAACATTCTTGTAATTGATTAC
CAAGTTTTGAATCATGTAGCAATTCCTCTATTGCTACAACCAGAATTTTA
CGTTGCTGTAAACTTCATCAGATATCTGTTAACATAAATAGTTCCTCATT
ATCTTTGTCTGTGCTTTAACTTGGAGACTAAATTGTCTTCTTTTGCTCAA
GTCGATGACACATAGTCCAAGAGCAAAATTTCAATGCAATTTTTTTCTTT
TCACCATACCTTTTATCTACCAGTTGCGTAATCATCAAGGATGGGGAGCT
TATAGCCTTGGGTAGAAATCGAACCACTGAGACACGAAATGCAACAAGGT
ATGCAGAAATGGAAGCCATAGATAATCTTCTAGAGATGTGGCAGAGAGAT
GGACTTTCAAAAGCAGAAGTGGCTAAAAACTTTTCACAATGTATTTTGTA
TGTTACATGTGAACCATGCATAATGTGTGCTGCAGCTTTGTCATTTCTTG
GCATAAAAGATGTATATTATGGTTGTGCAAATGAGAAATTTGGAGGGTGC
GGATCAATTTTATCCTTGCATTCAAGTTGCTCAGAGCCTTTCATCAGTGA
TAAAGTTCCACAAAGAGGTTTCAAATGTACAGGGGGATTAATGGCCTCAG
AAGCAATCTCTCTTTTCCGAAGTTTCTATGAACAGGGGAATCCTAATGCT
CCAAAGCCTCATAGGCCTCTCGTTCAAAAGAAAGTTGAGTGATACATATA
GGTTGGTATATTCTTTTCTTAGTGATTTCAAAATACTTCTACTCTTGCCT
AGTTTCTTGAGTGATGTTCTTTGTTTCTAATTTCTTGTAAGGGTTTTGGT
GCTGTAAGGTGATTTAGGGCTGATCAAATGTTGGCGATAGAACTGCGAAG
AGAAAAGCAAATAGCAAGTCAAGGAAAAAGCTGGTTGGAGTTTGATAATG
GTAATGGCATTTTGTTCTAGTGTGCTGTTGCATGTCAGCGTCGGATTTGT
CAAAGCCACATTATAAGTCATATTTAACTGTGTTAGTGGTAGGTAGATCA
ACAGTTTGATGGTTTGATAGGATAGGTAGCTTGAGCATTCTTAAAGAACA
AGTATCATATTGATAATTTCGTTAATCTTCAGGGGCTACTTATAAAAATT
TTGTCAACTATTTTATAACAAATTTGGGCTTGAAGGGTTTCTATTAAGAT
TTTCTTCGGCGAGGTATTTTACTTGTGTATATGTACATATAATTCCAATG
TATCCTATTTCTAAGGCTTTGGTGC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR016193Cytidine_deaminase-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003824catalytic activity