g.barbadense_cottongen_reftransV1_0096982, g.barbadense_cottongen_reftransV1_0096982 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0096982
Unique Name	g.barbadense_cottongen_reftransV1_0096982
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2404

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Dt05	chromosome	g.barbadense_cottongen_reftransV1_0096982:1..2404 . Dt05:13423056..13431129 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: Y4990_ARATH (Uncharacterized protein At4g19900 OS=Arabidopsis thaliana GN=At4g19900 PE=2 SV=1)

HSP 1 Score: 684.871 bits (1766), Expect = 0.000e+0
Identity = 381/651 (58.53%), Postives = 473/651 (72.66%), Query Frame = 2

Query:  158 YGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNK-------KDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYD-GGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTNRNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080
            +GAQ CAV+SA+LLL SVS+LY+RLSL S SH   H  S  + D V     +L    DV TT           E    E +D  EDD  +  E E     +       ++K  SS  FYFDH++G IRRAFNKRSI +WDYD  GF  +  S  D   +A FGSDD+PLDE +R K+ EV S+EDALL+K  +G+KV+PLR+ WGDWFDKK DFLRRDRMFKSN+E LNPLNNP+LQDPD +G TGLTRGDK+VQKW L++ K+ PF  KKPL +             KK  N   +LS        +    T  N+ +I + E KN  +E+ + + E + H+YADG +WGYYPG++  LSF+DF+D+FF+K KC MRVF++WNSP WM+SVRHQRGLESLL+QHRDACV+VFSET+ELDFF++SF+KD YKVAVAMPNLDELL+DTPTHVFAS+WF WRKTKFY  HYSELVRLAALYKYGG+YLDSD+IVL  L +L N++G+EDQ  G SLNGA+M+F K+SPF++ECLNE+YLTYDD  LR NGADLL+RVAKRF NGKN  + Q ELN++PS+VFFPI+SQ I  YF  P  E E+ QQD  F +IL ES+TFHFWNS+TS+LIPEP+SLVA+ ++H CI CS++L
Sbjct:   11 HGAQACAVMSAVLLLASVSLLYTRLSLFS-SHSPNHLRSGSSEDTVLFPDSVLVSDSDVETTGGGGRGSTTSTEDRIDEHDDAIEDDGVSNEEDENQDAEQEQEVDLNRNKAASSSGFYFDHVNGVIRRAFNKRSIDEWDYDYTGFSIDSDSSGDKSSRAAFGSDDVPLDESIRRKIVEVTSVEDALLLK--SGKKVSPLRQGWGDWFDKKGDFLRRDRMFKSNIETLNPLNNPMLQDPDSVGNTGLTRGDKVVQKWRLNQIKRNPFMAKKPLSVVS----------EKKEPNEFRLLSSVGEIKRGER--KTLDNDEKIEREEQKN--VESERKHDEVTEHMYADGTKWGYYPGIEPSLSFSDFMDSFFRKEKCSMRVFMVWNSPGWMFSVRHQRGLESLLSQHRDACVVVFSETVELDFFRNSFVKDSYKVAVAMPNLDELLQDTPTHVFASVWFDWRKTKFYPTHYSELVRLAALYKYGGVYLDSDVIVLGSLSSLRNTIGMEDQVAGESLNGAVMSFEKKSPFLLECLNEYYLTYDDKCLRCNGADLLTRVAKRFLNGKNRRMNQQELNIRPSSVFFPINSQQITNYFAYPAIEDERSQQDESFKKILNESLTFHFWNSVTSSLIPEPESLVAKFLDHSCIRCSDVL 644

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_MOUSE (Lactosylceramide 4-alpha-galactosyltransferase OS=Mus musculus GN=A4galt PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.254e-19
Identity = 69/211 (32.70%), Postives = 111/211 (52.61%), Query Frame = 2

Query: 1448 NLDELLKDTPTHV-FASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYF--VSPTTESEKLQQDALFNRILTESVTFHFWN--SLTSALIPEPKSLVARLINHPC 2059
            +L EL +DTP    ++    +W   +   +  S+  R+A L+K+GGIYLD+D IVLK LL L N++G++ +   LNGA +AF ++  F+  CL++F   Y+       G  LL+RV K++ + +++        V   P   F+PI  Q+  +YF  +SP    E+L Q      +L  +   H WN  S  + L    K+L+A+L    C
Sbjct:  151 DLQELFEDTPLAAWYSEARHRWEPYQLPVL--SDASRIALLWKFGGIYLDTDFIVLKNLLNLTNTLGIQSR-YVLNGAFLAFERKHEFLALCLHDFVANYNGWIWGHQGPQLLTRVFKKWCSIQSLEKSHACRGVTALPPEAFYPIPWQNWKKYFEDISP----EELTQ------LLNATYAVHVWNKKSQGTHLEATSKALLAQLHARYC 348

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_RAT (Lactosylceramide 4-alpha-galactosyltransferase OS=Rattus norvegicus GN=A4galt PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.983e-16
Identity = 68/213 (31.92%), Postives = 108/213 (50.70%), Query Frame = 2

Query: 1448 NLDELLKDTPTHVFASLWF---KWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYF--VSPTTESEKLQQDALFNRILTESVTFHFWN--SLTSALIPEPKSLVARLINHPC 2059
            +L EL +DTP     + W+   + R   +     S+  R+A L+K+GGIYLD+D IVLK L  L N +G++ +   LNGA +AF ++  F+  C+ +F   Y+       G  LL+RV K++ +  ++   +    V   P   F+PI  Q+  +YF  VSP    E+L Q      +L  +   H WN  S  + L    ++L+A+L    C
Sbjct:  152 DLQELFEDTPL----AAWYLEAQHRWEPYLLPVLSDASRIALLWKFGGIYLDTDFIVLKNLRNLTNMLGIQSR-YVLNGAFLAFERKHEFLALCIRDFVAHYNGWIWGHQGPQLLTRVFKKWCSIHSLKESRACRGVTALPPEAFYPIPWQNWKKYFEDVSP----EELAQ------LLNATYAVHVWNKKSQGTHLEATSRALLAQLHARYC 349

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_PONPY (Lactosylceramide 4-alpha-galactosyltransferase (Fragment) OS=Pongo pygmaeus GN=A4GALT PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.646e-16
Identity = 61/209 (29.19%), Postives = 103/209 (49.28%), Query Frame = 2

Query: 1448 NLDELLKDTP-THVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWN--SLTSALIPEPKSLVARLINHPC 2059
            +L EL +DTP    + ++  +W       +  S+  R+A ++K+GGIYLD+D IVLK L  L N +G + +   LNGA +AF++   F+  C+ +F   Y+       G  LL+RV K++ + ++++  +    V   P   F+PI  Q   +YF   + E           R+L  +   H WN  S  +      ++L+A+L    C
Sbjct:   10 DLRELFRDTPLADWYTAVQGRWEPYLLPVL--SDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVLGTQSR-YVLNGAFLAFQRRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKWCSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDISPEE--------LPRLLNATYAVHVWNKKSQGTRFEATSRALLAQLHARYC 207

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_HUMAN (Lactosylceramide 4-alpha-galactosyltransferase OS=Homo sapiens GN=A4GALT PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.900e-16
Identity = 58/185 (31.35%), Postives = 96/185 (51.89%), Query Frame = 2

Query: 1448 NLDELLKDTP-THVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWN 1993
            +L EL +DTP    +A++  +W       +  S+  R+A ++K+GGIYLD+D IVLK L  L N +G + +   LNGA +AF +   F+  C+ +F   Y+       G  LL+RV K++ + ++++  +    V   P   F+PI  Q   +YF       E +  + L  R+L+ +   H WN
Sbjct:  145 DLRELFRDTPLADWYAAVQGRWEPYLLPVL--SDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVLGTQSR-YVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKWCSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYF-------EDINPEEL-PRLLSATYAVHVWN 318

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_PANTR (Lactosylceramide 4-alpha-galactosyltransferase OS=Pan troglodytes GN=A4GALT PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.508e-16
Identity = 58/185 (31.35%), Postives = 96/185 (51.89%), Query Frame = 2

Query: 1448 NLDELLKDTP-THVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWN 1993
            +L EL +DTP    +A++  +W       +  S+  R+A ++K+GGIYLD+D IVLK L  L N +G + +   LNGA +AF +   F+  C+ +F   Y+       G  LL+RV K++ + ++++  +    V   P   F+PI  Q   +YF       E +  + L  R+L+ +   H WN
Sbjct:  145 DLRELFQDTPLADWYAAVQGRWEPYLLPVL--SDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVLGTQSR-YVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKWCSIRSLAESRSCRGVTTLPPEAFYPIPWQDWKKYF-------EDINPEEL-PRLLSATYAVHVWN 318

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_GORGO (Lactosylceramide 4-alpha-galactosyltransferase (Fragment) OS=Gorilla gorilla gorilla GN=A4GALT PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.638e-15
Identity = 57/185 (30.81%), Postives = 95/185 (51.35%), Query Frame = 2

Query: 1448 NLDELLKDTP-THVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWN 1993
            +L EL +DTP    +A++  +W       +  S+  R+A ++K+GGIYLD+D IVLK L  L N +G + +   LNGA +AF +   F+  C+ +F   Y+       G  LL+RV K++ + ++++  +    V   P   F+PI  Q   +YF       E +  + L  R+ + +   H WN
Sbjct:  119 DLRELFRDTPLADWYAAVQGRWEPYLLPVL--SDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVLGTQSR-YVLNGAFLAFERXHEFMALCMXDFVDHYNGWIWGHQGPQLLTRVFKKWCSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYF-------EDINPEEL-PRLFSATYAVHVWN 292

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GCT_HUMAN (Alpha-1,4-N-acetylglucosaminyltransferase OS=Homo sapiens GN=A4GNT PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 6.987e-9
Identity = 74/308 (24.03%), Postives = 114/308 (37.01%), Query Frame = 2

Query: 1304 SVRHQRGLESLLAQHRDACVLVFSETIELDFFKDS---------------FLKDGYKVAVAMP----------------------NLDELLKDTP-----THVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGK-----------NISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTS---ALIPEPKSLVARLINHPC 2059
            S +  +GLE+LL+  R    L  SE +E                      F   G   +  MP                      ++  LL+DTP       + AS    W          S+  RLA ++KYGGIY+D+D+I ++P+    N +  +    S NG +  F    PF+ EC+  F   Y+       G +L++R+ + +   +           NIS   P+        F+PIS +   RY+       E    +  FN     S   H WN +     A+I    +LV  L    C
Sbjct:   35 SFKSHQGLEALLSHRRGIVFLETSERMEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYPAFSFLSAIDNVFLFPLDMKRLLEDTPLFSWYNQINASAERNWLHIS------SDASRLAIIWKYGGIYMDTDVISIRPIPE-ENFLAAQASRYSSNG-IFGFLPHHPFLWECMENFVEHYNSAIWGNQGPELMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQR-------FYPISYREWRRYY-------EVWDTEPSFN----VSYALHLWNHMNQEGRAVIRGSNTLVENLYRKHC 316

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: A0A0B0P0K3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_09841 PE=4 SV=1)

HSP 1 Score: 1134.78 bits (2934), Expect = 0.000e+0
Identity = 620/644 (96.27%), Postives = 628/644 (97.52%), Query Frame = 2

Query:  158 YGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVAXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXMNKKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYDGGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTNRNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080
            YGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVATTTI SSTDDKIDELDTLEENDITE   ++   + EQEITTMNKKDKIFSSGHFYFDHLS SIRRAFN+RSIQDWDYDGGFLNEGFSGEDVKIKA FGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSNLEILNPLNNPLLQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPL ISETGLKVNKGSESKKNENARN+LSERESSSSEDLSSNTNRNESRIRK EVKN DLE +KTNTEFSGHIYADGKRWGYYPGLDSRLSF DFVDAFFKKGKCDMRVF+IWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFK SFLKDGYKVAVAMPNLDELLKDTPTHVFAS+WFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL
Sbjct:   13 YGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVATTTIISSTDDKIDELDTLEENDITEDDNNNEIEQEEQEITTMNKKDKIFSSGHFYFDHLSRSIRRAFNRRSIQDWDYDGGFLNEGFSGEDVKIKAAFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSNLEILNPLNNPLLQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLEISETGLKVNKGSESKKNENARNMLSERESSSSEDLSSNTNRNESRIRKNEVKNEDLEAHKTNTEFSGHIYADGKRWGYYPGLDSRLSFIDFVDAFFKKGKCDMRVFMIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKVSFLKDGYKVAVAMPNLDELLKDTPTHVFASVWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 656

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: A0A0D2UMI6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G152200 PE=4 SV=1)

HSP 1 Score: 1122.07 bits (2901), Expect = 0.000e+0
Identity = 623/644 (96.74%), Postives = 632/644 (98.14%), Query Frame = 2

Query:  158 YGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVAXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXMNKKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYDGGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTNRNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080
            YGAQVCAVISALLLLFSVS+LYSRLSLSSKSHMYPHHSS DNNDAVFHSIPLLSDSEDVATTTITSSTDDKIDELDTLEENDITE   ++   + EQEITTMNKKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYDGGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSNLEILNPLNNPLLQDPDG+GATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKV KGSESKKNENARNVLSERESSSSEDLSSNTNRNESRIRK EVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSET+ELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFAS+WFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLL LNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSN KNISIK+PELNV+PSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL
Sbjct:   13 YGAQVCAVISALLLLFSVSVLYSRLSLSSKSHMYPHHSSEDNNDAVFHSIPLLSDSEDVATTTITSSTDDKIDELDTLEENDITEDDNNNEIEQEEQEITTMNKKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYDGGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSNLEILNPLNNPLLQDPDGVGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVKKGSESKKNENARNVLSERESSSSEDLSSNTNRNESRIRKNEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETVELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASVWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLALNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNEKNISIKRPELNVQPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 656

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: A0A061GCF6_THECC (Alpha 1,4-glycosyltransferase family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_029397 PE=4 SV=1)

HSP 1 Score: 932.939 bits (2410), Expect = 0.000e+0
Identity = 517/662 (78.10%), Postives = 566/662 (85.50%), Query Frame = 2

Query:  122 MIRNLRSRRRPRYGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAV-FHSIPLLSDSED---VAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNKKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYDGGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTN---RNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080
            M+RNL+SRRRPRYGAQVCA ISALLLLFSVS+LYSRLSLSSK H+YPHHSS+D ND V F + PLLSDS+D             D   D    L E+D   ++   E EQEITTMN+K+KIFSSGHFYFDHLSGSI+RA NKRSI+DWDYDGGFLNEGF GED KIK  FGSDDIPLDEEVR KM+EVE +EDALLVKKV G+K NPLREKWGDWFDKK DFLRRDRMFKSNLE+LNPLNNPLLQDPDG+G TGLTRGD++VQKWILSEFKKVPFTGKKPLGI E G +  KG E KKN+NARNVLS+RE+S  +  S NTN    NES  RK EVKNG LE  K NTEFSGHIYADGKRWGYYPGLDSRLSF+DF+DAF +KGKCDMRVF+IWNSPPWMYSVRHQRGLESLLAQHRDACV++FSETIELDFFK+SF+KDGYKVAVAMPNLDELLKDT TH FAS+WF+WRKTKFY IHYSELVRLAALYKYGGIYLD+DIIVLKPLL LNNS+GLEDQ  GSSLNGALMAFRK+SPFIMECL EFYLTYDDT+LRWNGADLLSRVAKRF N       Q ELNV PS VFFPISSQHI RYFV+PTTE++K QQD LF +IL ESVTFHFWNSLTSALIPEP+SLV RLI++ CIHC ++L
Sbjct:    1 MLRNLQSRRRPRYGAQVCAAISALLLLFSVSLLYSRLSLSSKPHIYPHHSSIDKNDDVAFPNNPLLSDSDDDVSTTNDDKIDEFDTLEDNDTVLTEDDNNNNEIEQEEEQEITTMNQKNKIFSSGHFYFDHLSGSIKRASNKRSIEDWDYDGGFLNEGFLGEDAKIKIAFGSDDIPLDEEVRRKMSEVEGVEDALLVKKVGGKKANPLREKWGDWFDKKGDFLRRDRMFKSNLEVLNPLNNPLLQDPDGVGVTGLTRGDRIVQKWILSEFKKVPFTGKKPLGILEKGSEDKKGGEGKKNDNARNVLSKRENSIKDSGS-NTNGNKTNESNSRKNEVKNGGLEADKMNTEFSGHIYADGKRWGYYPGLDSRLSFSDFMDAFLRKGKCDMRVFMIWNSPPWMYSVRHQRGLESLLAQHRDACVILFSETIELDFFKESFVKDGYKVAVAMPNLDELLKDTFTHAFASVWFEWRKTKFYAIHYSELVRLAALYKYGGIYLDADIIVLKPLLALNNSIGLEDQLAGSSLNGALMAFRKQSPFIMECLKEFYLTYDDTQLRWNGADLLSRVAKRFLNN------QRELNVWPSFVFFPISSQHITRYFVAPTTETDKAQQDTLFQKILAESVTFHFWNSLTSALIPEPESLVTRLIDYHCIHCFDVL 655

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: A0A061GDC2_THECC (Alpha 1,4-glycosyltransferase family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_029397 PE=4 SV=1)

HSP 1 Score: 736.102 bits (1899), Expect = 0.000e+0
Identity = 421/536 (78.54%), Postives = 460/536 (85.82%), Query Frame = 2

Query:  122 MIRNLRSRRRPRYGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAV-FHSIPLLSDSED---VAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNKKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYDGGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTN---RNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKES 1702
            M+RNL+SRRRPRYGAQVCA ISALLLLFSVS+LYSRLSLSSK H+YPHHSS+D ND V F + PLLSDS+D             D   D    L E+D   ++   E EQEITTMN+K+KIFSSGHFYFDHLSGSI+RA NKRSI+DWDYDGGFLNEGF GED KIK  FGSDDIPLDEEVR KM+EVE +EDALLVKKV G+K NPLREKWGDWFDKK DFLRRDRMFKSNLE+LNPLNNPLLQDPDG+G TGLTRGD++VQKWILSEFKKVPFTGKKPLGI E G +  KG E KKN+NARNVLS+RE+S  +  S NTN    NES  RK EVKNG LE  K NTEFSGHIYADGKRWGYYPGLDSRLSF+DF+DAF +KGKCDMRVF+IWNSPPWMYSVRHQRGLESLLAQHRDACV++FSETIELDFFK+SF+KDGYKVAVAMPNLDELLKDT TH FAS+WF+WRKTKFY IHYSELVRLAALYKYGGIYLD+DIIVLKPLL LNNS+GLEDQ  GSSLNGALMAFRK+S
Sbjct:    1 MLRNLQSRRRPRYGAQVCAAISALLLLFSVSLLYSRLSLSSKPHIYPHHSSIDKNDDVAFPNNPLLSDSDDDVSTTNDDKIDEFDTLEDNDTVLTEDDNNNNEIEQEEEQEITTMNQKNKIFSSGHFYFDHLSGSIKRASNKRSIEDWDYDGGFLNEGFLGEDAKIKIAFGSDDIPLDEEVRRKMSEVEGVEDALLVKKVGGKKANPLREKWGDWFDKKGDFLRRDRMFKSNLEVLNPLNNPLLQDPDGVGVTGLTRGDRIVQKWILSEFKKVPFTGKKPLGILEKGSEDKKGGEGKKNDNARNVLSKRENSIKDSGS-NTNGNKTNESNSRKNEVKNGGLEADKMNTEFSGHIYADGKRWGYYPGLDSRLSFSDFMDAFLRKGKCDMRVFMIWNSPPWMYSVRHQRGLESLLAQHRDACVILFSETIELDFFKESFVKDGYKVAVAMPNLDELLKDTFTHAFASVWFEWRKTKFYAIHYSELVRLAALYKYGGIYLDADIIVLKPLLALNNSIGLEDQLAGSSLNGALMAFRKQS 535

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: A0A061GEJ8_THECC (Alpha 1,4-glycosyltransferase family protein, putative isoform 3 OS=Theobroma cacao GN=TCM_029397 PE=4 SV=1)

HSP 1 Score: 734.947 bits (1896), Expect = 0.000e+0
Identity = 420/535 (78.50%), Postives = 459/535 (85.79%), Query Frame = 2

Query:  122 MIRNLRSRRRPRYGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAV-FHSIPLLSDSED---VAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNKKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYDGGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTN---RNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKE 1699
            M+RNL+SRRRPRYGAQVCA ISALLLLFSVS+LYSRLSLSSK H+YPHHSS+D ND V F + PLLSDS+D             D   D    L E+D   ++   E EQEITTMN+K+KIFSSGHFYFDHLSGSI+RA NKRSI+DWDYDGGFLNEGF GED KIK  FGSDDIPLDEEVR KM+EVE +EDALLVKKV G+K NPLREKWGDWFDKK DFLRRDRMFKSNLE+LNPLNNPLLQDPDG+G TGLTRGD++VQKWILSEFKKVPFTGKKPLGI E G +  KG E KKN+NARNVLS+RE+S  +  S NTN    NES  RK EVKNG LE  K NTEFSGHIYADGKRWGYYPGLDSRLSF+DF+DAF +KGKCDMRVF+IWNSPPWMYSVRHQRGLESLLAQHRDACV++FSETIELDFFK+SF+KDGYKVAVAMPNLDELLKDT TH FAS+WF+WRKTKFY IHYSELVRLAALYKYGGIYLD+DIIVLKPLL LNNS+GLEDQ  GSSLNGALMAFRK+
Sbjct:    1 MLRNLQSRRRPRYGAQVCAAISALLLLFSVSLLYSRLSLSSKPHIYPHHSSIDKNDDVAFPNNPLLSDSDDDVSTTNDDKIDEFDTLEDNDTVLTEDDNNNNEIEQEEEQEITTMNQKNKIFSSGHFYFDHLSGSIKRASNKRSIEDWDYDGGFLNEGFLGEDAKIKIAFGSDDIPLDEEVRRKMSEVEGVEDALLVKKVGGKKANPLREKWGDWFDKKGDFLRRDRMFKSNLEVLNPLNNPLLQDPDGVGVTGLTRGDRIVQKWILSEFKKVPFTGKKPLGILEKGSEDKKGGEGKKNDNARNVLSKRENSIKDSGS-NTNGNKTNESNSRKNEVKNGGLEADKMNTEFSGHIYADGKRWGYYPGLDSRLSFSDFMDAFLRKGKCDMRVFMIWNSPPWMYSVRHQRGLESLLAQHRDACVILFSETIELDFFKESFVKDGYKVAVAMPNLDELLKDTFTHAFASVWFEWRKTKFYAIHYSELVRLAALYKYGGIYLDADIIVLKPLLALNNSIGLEDQLAGSSLNGALMAFRKQ 534

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: A0A067GCF8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005968mg PE=4 SV=1)

HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0
Identity = 369/581 (63.51%), Postives = 440/581 (75.73%), Query Frame = 2

Query:  455 NKKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYD-GGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTN-----RNESRIRKIEVKNG-------------------------------DLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080
            N++    SS  +YFDHLSGSIRRAFNKRSI DWD+D  GF     + ED K K  FGSDD P+D+EVR KMT V+ IEDALL+K   G+  +PLREKWG+WFDKK +FLRRD+MFKS+LE+LNP+NNPLLQDPDG+G +GLTRGDK++QK +L+EFK VPF GKKPLG+ ++   +N     ++    R+ +   E  + +D  +N +      NE  ++     N                                D + Y++  EFS HIYADGKRWGYYPGL  RLSF++F+DAFF+KGKCDMRVF++WNSPPWMYSVRHQRGLES+L  HRDACV+VFSETIELDFFKDSF+KDG+KVAVAMPNLDELLKDTP H FAS+WF+WRKTKFY  HYSELVRLAALYKYGGIY+DSDIIVLK L +LNNSVG+ED+  GSSLNGA+MAFRK SPFI+ECL EFYLTYD+TRLRWNGADLL RVA+RF +  N   K+ ELNV+PS  FFPIS Q+I RYFV+  TESEK QQDALF RIL  S+TFHFWNS+TSALIPEP+SLVARLI+  CIHC ++L
Sbjct:   90 NEEKPKMSSSSYYFDHLSGSIRRAFNKRSIDDWDFDYSGFTTLQSNVED-KSKTAFGSDDFPVDDEVRRKMTLVKDIEDALLLK--TGKGKSPLREKWGEWFDKKGEFLRRDKMFKSHLEVLNPMNNPLLQDPDGVGISGLTRGDKVLQKLLLNEFKLVPFIGKKPLGVLDSSGNLNFRGNGREELGRRSEIKRAERRTLDDSVNNESYSKRVNNEEHVKDESSGNATGELYDKEVNDSNKYLSARGNESSKTDEAVRDSKAYQSKNEFSSHIYADGKRWGYYPGLHPRLSFSNFMDAFFRKGKCDMRVFMVWNSPPWMYSVRHQRGLESVLFHHRDACVVVFSETIELDFFKDSFVKDGFKVAVAMPNLDELLKDTPAHEFASVWFEWRKTKFYNTHYSELVRLAALYKYGGIYMDSDIIVLKSLSSLNNSVGMEDKFPGSSLNGAVMAFRKHSPFILECLKEFYLTYDETRLRWNGADLLQRVARRFWSVDNSYSKKFELNVQPSFFFFPISPQNISRYFVTSATESEKAQQDALFKRILGGSLTFHFWNSMTSALIPEPESLVARLIDKSCIHCFDVL 667

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: V4MQI9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10024627mg PE=4 SV=1)

HSP 1 Score: 691.804 bits (1784), Expect = 0.000e+0
Identity = 382/655 (58.32%), Postives = 475/655 (72.52%), Query Frame = 2

Query:  158 YGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNKKDKI------FSSGHFYFDHLSGSIRRAFNKRSIQDWDYD-GGF-LNEGFSGEDV---KIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTNRNESRIRKIEVKNGD-LETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080
            +GAQ CAV+SA+LLL SVS+LY+RLSL S SH   H  S    DAV     LL    DV  T     + ++    +  +  +   +D  +  E E     ++ ++       SS  FYFDH++G IRRAFNKRSI +WDYD  GF +  G   +D    K KA FGSDD+PLDE +R K+ EV S+EDALL+K  +GR V+PLRE WGDWFDKK DFLRRDRMFKSN+E LNPLN P+LQDPDG+G TGLTRGDK VQKW LSE K+ PF  KKPL ++E   + N+  ES+K    +N + E     + ++     +      K E K  + +E    N EF+ H+YADG RWGYYP L+  LSF+DF+D+FF+K KC MRVF++WNSP WM+SVRHQRGLESLL+QHRDACV+VFSET+EL+FF++SF+KDGYKVAVAMPNLDELL+DTPTHVFAS+WF WRKTKFY  HYSELVRLA LYKYGG+YLDSD+IVL  L +L N++G+EDQ  G  LNGA+M+F K+SPF++ECLNE+YLTYDD  LR NGADLL+RVAKRF NGKN  + Q   N++P +VFFPI+SQ I  YF  P TE EKLQQD LF +I+ ES+TFHFWNS+TS+LIPEP+SLVAR ++H CI CS++L
Sbjct:   11 HGAQACAVMSAVLLLASVSLLYTRLSLFS-SHSPNHLRSGSGEDAVLFPDSLLVSDSDVVETAGGRGSSNEDRIDEHDDAIEDDRNDGVSNEEDENQDAEQEQEVDPDRNKASSSGFYFDHVNGVIRRAFNKRSIDEWDYDYAGFSIGSGIGNDDSFGEKSKAAFGSDDVPLDESIRRKIVEVSSVEDALLLK--SGRMVSPLREGWGDWFDKKGDFLRRDRMFKSNIETLNPLNIPMLQDPDGVGITGLTRGDKAVQKWRLSEIKRNPFMVKKPLSVAEK-REPNEFRESRKGIRLQNSVDESGEVRNGEIKRGERKTLDNDSKAETKEEENVEFDWENDEFTEHMYADGTRWGYYPRLEPGLSFSDFMDSFFRKEKCSMRVFMVWNSPGWMFSVRHQRGLESLLSQHRDACVVVFSETVELNFFRNSFVKDGYKVAVAMPNLDELLQDTPTHVFASVWFDWRKTKFYPTHYSELVRLATLYKYGGLYLDSDVIVLGSLSSLKNTLGVEDQAAGEKLNGAVMSFEKKSPFLLECLNEYYLTYDDKCLRCNGADLLTRVAKRFLNGKNRRMTQQAPNIRPFSVFFPINSQQITSYFAFPATEDEKLQQDELFKKIINESLTFHFWNSITSSLIPEPESLVARFLDHSCIRCSDVL 661

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: V4UI09_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014513mg PE=4 SV=1)

HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0
Identity = 367/574 (63.94%), Postives = 434/574 (75.61%), Query Frame = 2

Query:  476 SSGHFYFDHLSGSIRRAFNKRSIQDWDYD-GGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGI--------------SETGLK--------------VNKGSESK--------KNENARNVLXXXXXXXXXXXXXNTNRNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080
            SS  +YFDHLSGSIRRAFNKRSI DWD+D  GF     + ED K K  FGSDD P+D+EVR KMT V+ IEDALL+K   G+  +PLRE WG+WFDKK +FLRRD+MFKS+LE+LNP+NNPLLQDPDG+G +GLTRGDK++QK +L+EFK VPF GKKPLG+               E G +              VN  S SK        K+E++ N   E       D +   +   +   K +    D + Y++  EFS HIYADGKRWGYYPGL  RLSF++F+DAFF+KGKCDMRVF++WNSPPWMYSVRHQRGLES+L  HRDACV+VFSETIELDFFKDSF+KDG+KVAV MPNLDELLKDTP H FAS+WF+WRKTKFY  HYSELVRLAALYKYGGIY+DSDIIVLK L +LNNSVG+ED+  GSSLNGA+MAFRK SPFI+ECL EFYLTYD+TRLRWNGADLL RVA+RF +  N   K+ ELNV+PS  FFPIS Q+I RYF++  TESEK Q DALF RIL  S+TFHFWNS+TS+LIPEP+SLVARLI+  CI+C ++L
Sbjct:   97 SSSGYYFDHLSGSIRRAFNKRSIDDWDFDYSGFPTLQSNVED-KSKTAFGSDDFPVDDEVRRKMTLVKDIEDALLLK--TGKGKSPLRETWGEWFDKKGEFLRRDKMFKSHLEVLNPMNNPLLQDPDGVGISGLTRGDKVLQKLLLNEFKLVPFIGKKPLGVLDSSGNLNFRGNGREELGRRSEIKRAERRTLDDSVNNESYSKRVNNEEPVKDESSGNATGELYDKEVNDSNKYLSARGNESSKTDEAVRDSKAYQSKNEFSSHIYADGKRWGYYPGLHPRLSFSNFMDAFFRKGKCDMRVFMVWNSPPWMYSVRHQRGLESVLFHHRDACVVVFSETIELDFFKDSFVKDGFKVAVVMPNLDELLKDTPAHEFASVWFEWRKTKFYNTHYSELVRLAALYKYGGIYMDSDIIVLKSLSSLNNSVGMEDKFPGSSLNGAVMAFRKHSPFILECLKEFYLTYDETRLRWNGADLLQRVARRFWSVDNSYSKKIELNVQPSFFFFPISPQNISRYFITSATESEKAQLDALFKRILGGSLTFHFWNSMTSSLIPEPESLVARLIDKSCIYCFDVL 667

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BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: W8Q6J5_ARATH (Glycosyltransferase (Fragment) OS=Arabidopsis thaliana GN=AT4G19900 PE=2 SV=1)

HSP 1 Score: 684.871 bits (1766), Expect = 0.000e+0
Identity = 381/651 (58.53%), Postives = 473/651 (72.66%), Query Frame = 2

Query:  158 YGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNK-------KDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYD-GGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTNRNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080
            +GAQ CAV+SA+LLL SVS+LY+RLSL S SH   H  S  + D V     +L    DV TT           E    E +D  EDD  +  E E     +       ++K  SS  FYFDH++G IRRAFNKRSI +WDYD  GF  +  S  D   +A FGSDD+PLDE +R K+ EV S+EDALL+K  +G+KV+PLR+ WGDWFDKK DFLRRDRMFKSN+E LNPLNNP+LQDPD +G TGLTRGDK+VQKW L++ K+ PF  KKPL +             KK  N   +LS        +    T  N+ +I + E KN  +E+ + + E + H+YADG +WGYYPG++  LSF+DF+D+FF+K KC MRVF++WNSP WM+SVRHQRGLESLL+QHRDACV+VFSET+ELDFF++SF+KD YKVAVAMPNLDELL+DTPTHVFAS+WF WRKTKFY  HYSELVRLAALYKYGG+YLDSD+IVL  L +L N++G+EDQ  G SLNGA+M+F K+SPF++ECLNE+YLTYDD  LR NGADLL+RVAKRF NGKN  + Q ELN++PS+VFFPI+SQ I  YF  P  E E+ QQD  F +IL ES+TFHFWNS+TS+LIPEP+SLVA+ ++H CI CS++L
Sbjct:   11 HGAQACAVMSAVLLLASVSLLYTRLSLFS-SHSPNHLRSGSSEDTVLFPDSVLVSDSDVETTGGGGRGSTTSTEDRIDEHDDAIEDDGVSNEEDENQDAEQEQEVDLNRNKAASSSGFYFDHVNGVIRRAFNKRSIDEWDYDYTGFSIDSDSSGDKSSRAAFGSDDVPLDESIRRKIVEVTSVEDALLLK--SGKKVSPLRQGWGDWFDKKGDFLRRDRMFKSNIETLNPLNNPMLQDPDSVGNTGLTRGDKVVQKWRLNQIKRNPFMAKKPLSVVS----------EKKEPNEFRLLSSVGEIKRGER--KTLDNDEKIEREEQKN--VESERKHDEVTEHMYADGTKWGYYPGIEPSLSFSDFMDSFFRKEKCSMRVFMVWNSPGWMFSVRHQRGLESLLSQHRDACVVVFSETVELDFFRNSFVKDSYKVAVAMPNLDELLQDTPTHVFASVWFDWRKTKFYPTHYSELVRLAALYKYGGVYLDSDVIVLGSLSSLRNTIGMEDQVAGESLNGAVMSFEKKSPFLLECLNEYYLTYDDKCLRCNGADLLTRVAKRFLNGKNRRMNQQELNIRPSSVFFPINSQQITNYFAYPAIEDERSQQDESFKKILNESLTFHFWNSVTSSLIPEPESLVAKFLDHSCIRCSDVL 644

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: A0A0D2ZRX7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 375/658 (56.99%), Postives = 461/658 (70.06%), Query Frame = 2

Query:  158 YGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMN-----------KKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYDGGFLNEGFSGED---VKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTNRNESRIRKIEVKN-GDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGS--SLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080
            + AQ CAV+SA+LLL SVS+LY+RLSL S SH   H  S    DAV     LL    DV  TT    +    ++     ++ I ED N+    ++    +            + K  SSG FYFDH+ G +RRAFNKRSI +WDYD      GFS +D   VK +A FGSDD+PLDE +R KM EV S+EDALL+K  +G++V+PLRE WGDWFDKK  FLR+DRMF+SN E LNPLNN +LQDPDG+G TGLT GDK+VQ W LSE K+ P T KKPL + E           KK  N                          I+  E K   D +      E   H+YADG RWGYYPGL+  LSF++F+D+FF+KG+C +RVF++WNSP WM+SVRHQRGLESLL+QH+DACV+V SET+ELDFF+ SF+KDGYKVAVAMPNLDELL+DTPTHVFAS+WF WRKTKFY  HYSELVRLA LYKYGG+YLDSD+IVL  L +L N++G+EDQG+  SLNGA+M+F K+SPF++ECLNE+YLTYDD  LR NGADLL+RVAKRF NGKN  + Q ELNV+P +VFFPISSQ I  YF  P TE EK +QD LF +I+ ES+TFHFWNS+TS+LIPEP+SLVARL++H C+ CS++L
Sbjct:   11 HSAQACAVMSAVLLLVSVSLLYTRLSLFS-SHSPTHLRSSPGEDAVLFPDSLLVSDSDVVETTGGRGSSTSTEDRIDEHDDAIEEDRNDGASNEDDENQDAEQEREVTADPNRSKASSSG-FYFDHVDGVVRRAFNKRSIAEWDYD----YTGFSNDDESSVKSQALFGSDDVPLDEAIRKKMVEVASVEDALLLK--SGKRVSPLREGWGDWFDKKGPFLRKDRMFRSNFETLNPLNNLMLQDPDGVGVTGLTAGDKVVQMWRLSEVKRGPLTAKKPLSVVE-----------KKEPNG-------------------------IKSGERKTLDDDKKVGVEDEVREHLYADGTRWGYYPGLEPGLSFSEFMDSFFRKGRCGVRVFMVWNSPGWMFSVRHQRGLESLLSQHKDACVVVLSETVELDFFRSSFVKDGYKVAVAMPNLDELLQDTPTHVFASIWFDWRKTKFYPTHYSELVRLATLYKYGGVYLDSDVIVLGSLSSLRNTLGMEDQGAGESLNGAVMSFEKKSPFLLECLNEYYLTYDDKCLRCNGADLLTRVAKRFLNGKNRRMTQQELNVRPFSVFFPISSQQITNYFAYPATEEEKSKQDELFKKIINESLTFHFWNSVTSSLIPEPESLVARLLDHSCLRCSDVL 624

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 8


Match Name	E-value	Identity	Description
Y4990_ARATH	0.000e+0	58.53	Uncharacterized protein At4g19900 OS=Arabidopsis t...	[more]
A4GAT_MOUSE	7.254e-19	32.70	Lactosylceramide 4-alpha-galactosyltransferase OS=...	[more]
A4GAT_RAT	3.983e-16	31.92	Lactosylceramide 4-alpha-galactosyltransferase OS=...	[more]
A4GAT_PONPY	4.646e-16	29.19	Lactosylceramide 4-alpha-galactosyltransferase (Fr...	[more]
A4GAT_HUMAN	4.900e-16	31.35	Lactosylceramide 4-alpha-galactosyltransferase OS=...	[more]
A4GAT_PANTR	6.508e-16	31.35	Lactosylceramide 4-alpha-galactosyltransferase OS=...	[more]
A4GAT_GORGO	1.638e-15	30.81	Lactosylceramide 4-alpha-galactosyltransferase (Fr...	[more]
A4GCT_HUMAN	6.987e-9	24.03	Alpha-1,4-N-acetylglucosaminyltransferase OS=Homo ...	[more]

BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0B0P0K3_GOSAR	0.000e+0	96.27	Uncharacterized protein OS=Gossypium arboreum GN=F...	[more]
A0A0D2UMI6_GOSRA	0.000e+0	96.74	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061GCF6_THECC	0.000e+0	78.10	Alpha 1,4-glycosyltransferase family protein, puta...	[more]
A0A061GDC2_THECC	0.000e+0	78.54	Alpha 1,4-glycosyltransferase family protein, puta...	[more]
A0A061GEJ8_THECC	0.000e+0	78.50	Alpha 1,4-glycosyltransferase family protein, puta...	[more]
A0A067GCF8_CITSI	0.000e+0	63.51	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
V4MQI9_EUTSA	0.000e+0	58.32	Uncharacterized protein OS=Eutrema salsugineum GN=...	[more]
V4UI09_9ROSI	0.000e+0	63.94	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
W8Q6J5_ARATH	0.000e+0	58.53	Glycosyltransferase (Fragment) OS=Arabidopsis thal...	[more]
A0A0D2ZRX7_BRAOL	0.000e+0	56.99	Uncharacterized protein OS=Brassica oleracea var. ...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007652	Alpha 1,4-glycosyltransferase domain	PFAM	PF04572	Gb3_synth	coord: 522..651 e-value: 8.5E-27 score: 93.8
IPR007577	Glycosyltransferase, DXD sugar-binding motif	PFAM	PF04488	Gly_transf_sug	coord: 396..511 e-value: 4.2E-24 score: 84.9
None	No IPR available	PANTHER	PTHR12042:SF13	SUBFAMILY NOT NAMED	coord: 162..653
None	No IPR available	PANTHER	PTHR12042	LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE ALPHA- 1,4-GALACTOSYLTRANSFERASE	coord: 162..653
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 41..653
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..40
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 29..40
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 17..28
None	No IPR available	TMHMM	TMhelix		coord: 13..35
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 349..628

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0096982 ID=g.barbadense_cottongen_reftransV1_0096982; Name=g.barbadense_cottongen_reftransV1_0096982; organism=Gossypium barbadense; type=contig; length=2404bp
TGTTAATTTCCCACGATAGCCAAATGCTCCAGGTGAAGGCTAGGAACTTT
CTGCACTGTCGCACTCCGTCTTCTCTTTTATCCATTGCCGGAATTCGCTA
AGAGTTTAACGGCGGGGGAAAATGATTCGGAATCTCCGATCTCGGCGGCG
GCCACGTTACGGCGCACAGGTATGTGCTGTGATCTCAGCTCTTCTCCTCT
TATTTTCAGTATCTATTCTCTACAGCCGCCTTTCCCTCTCTTCCAAATCC
CACATGTATCCCCACCACTCCTCCGTAGATAACAACGACGCGGTTTTCCA
CTCCATCCCTCTCCTCTCCGACTCCGAAGACGTCGCCACCACCACCATCA
CCTCCTCAACCGACGACAAAATTGACGAACTCGATACTCTCGAAGAAAAC
GACATAACCGAAGACGACAACAACAATGAGATCGAGCAAGAAATCACGAC
TATGAATAAAAAAGACAAGATCTTTTCGTCTGGGCATTTTTATTTCGACC
ATTTAAGTGGATCAATCAGAAGAGCTTTCAATAAACGTTCGATTCAAGAT
TGGGATTACGATGGAGGGTTTTTGAACGAAGGGTTTTCGGGGGAAGATGT
CAAAATTAAGGCAACCTTTGGATCCGATGATATCCCATTGGATGAGGAAG
TTAGGAGCAAGATGACTGAAGTGGAAAGTATTGAAGATGCTTTGCTGGTC
AAGAAAGTTGCCGGGAGAAAAGTGAACCCTTTGAGGGAGAAATGGGGTGA
TTGGTTTGATAAGAAAAGTGATTTTTTGAGAAGGGATAGAATGTTTAAGT
CGAATTTGGAGATTTTGAATCCTTTGAATAATCCTTTGCTGCAAGACCCT
GACGGGATTGGTGCTACTGGCTTGACTAGAGGGGATAAAATGGTGCAGAA
GTGGATTTTGAGTGAGTTTAAGAAGGTCCCTTTTACTGGGAAGAAGCCCT
TGGGGATTTCCGAGACGGGCTTGAAGGTTAATAAAGGCAGTGAGAGTAAG
AAAAATGAAAATGCGAGGAATGTGTTAAGCGAAAGAGAAAGTAGTAGCAG
TGAAGATTTGAGTTCAAATACAAATAGGAATGAAAGTAGAATTAGGAAGA
TTGAGGTCAAGAATGGAGATTTGGAGACTTATAAGACTAACACTGAGTTT
TCAGGCCATATATATGCGGATGGAAAGAGATGGGGTTACTATCCTGGATT
GGACTCAAGGTTGTCTTTTACAGATTTTGTGGATGCATTTTTTAAGAAAG
GGAAGTGTGATATGAGAGTTTTTATAATATGGAATTCCCCTCCATGGATG
TATAGTGTTAGGCACCAAAGGGGGCTAGAGAGTCTGCTTGCTCAGCATAG
AGATGCTTGTGTCTTAGTGTTCTCCGAAACGATTGAGCTTGATTTCTTCA
AAGATAGCTTTTTGAAAGATGGTTACAAAGTTGCTGTAGCAATGCCAAAC
CTTGATGAATTGTTGAAAGATACACCTACCCATGTATTTGCATCTTTGTG
GTTTAAATGGAGAAAGACAAAATTCTATACTATCCATTATAGTGAGCTCG
TTCGACTTGCTGCTCTTTACAAATATGGTGGCATTTATCTTGATTCTGAC
ATTATAGTTCTGAAACCGTTACTGACACTCAATAATTCTGTGGGCCTTGA
AGATCAAGGAAGCTCTTTGAATGGAGCTTTAATGGCATTTAGAAAGGAGA
GTCCTTTTATAATGGAGTGTTTGAATGAGTTCTATTTGACGTATGATGAT
ACCCGATTGAGATGGAATGGGGCTGATCTTCTATCAAGAGTTGCAAAAAG
GTTTTCGAATGGAAAGAACATATCCATCAAACAGCCAGAGTTAAATGTGA
AACCTTCCGCTGTTTTCTTCCCTATTAGTTCTCAGCATATTATAAGATAC
TTTGTCTCACCGACGACAGAATCTGAGAAATTGCAGCAAGATGCTTTATT
CAACAGGATTCTGACCGAGTCTGTGACGTTTCATTTCTGGAACAGCTTGA
CGTCTGCGCTCATTCCAGAGCCAAAGAGCCTCGTAGCCAGGCTTATTAAC
CATCCATGTATTCATTGCTCCGAATTGTTGTGAATTTCACATCTCTCTTT
GGTGTTGCCAAAGAATTAATCAAAGCAATTATTTTTTAACCGACGGTCAC
AAAATGGTTTATGATATTTTTAGGTTTTCAATTTCATGTTAGAAATCAAC
ATAGTTGTAAAGTCTCTATAATCTCATTCCTCCAATTTTGCCAATGATTA
GGCTCCCCAACCAAGTCAAAGTTGATCTTTTGTAATTTTATTGCCAATTA
AATAGCTCAGCTGGTAATATATACCTTTGGCCGTTGTGCAAATAAGACAT
GGCTGCCTAATGAATAGAAGTGGTTTCTTTATTAAATAGTCATTTTGATC
CATC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR007652	A1-4-GlycosylTfrase_dom
IPR007577	GlycoTrfase_DXD_sugar-bd_CS
IPR029044	Nucleotide-diphossugar_trans

Search form

g.barbadense_cottongen_reftransV1_0096982, g.barbadense_cottongen_reftransV1_0096982 (contig) Gossypium barbadense

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