g.barbadense_cottongen_reftransV1_0091728, g.barbadense_cottongen_reftransV1_0091728 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0091728
Unique Nameg.barbadense_cottongen_reftransV1_0091728
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3467
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Dt06chromosomeg.barbadense_cottongen_reftransV1_0091728:1..3378 .
Dt06:28605162..28611021 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: TOCC_ARATH (Tocopherol cyclase, chloroplastic OS=Arabidopsis thaliana GN=VTE1 PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 1.015e-128
Identity = 189/254 (74.41%), Postives = 215/254 (84.65%), Query Frame = -3
Query:  685 RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTT-TPEVLKTALQ 1443
            RT Y  TVK+ARWEYSTRP YGWGDVG+KQKSTAGW AAFP+FEPHWQICMA GLSTGWIEW GERFEF+DAPSYSEKNWGGGFPRKWFW QCNVFEGA+G+++LT  GGLRQLPGLTET+EN AL+ VHYDG  YEFVPWNGVV WE++ WGYW I AEN+ H+VELEA T ++GT L APT E GL  AC D+C G+L L+IWE+   GSKGK+IL+ KS MAA+E+GGGPWF TWKG T+ TPE+LK ALQ
Sbjct:  215 RTDYAETVKSARWEYSTRPVYGWGDVGAKQKSTAGWPAAFPVFEPHWQICMAGGLSTGWIEWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGATGEVALTAGGGLRQLPGLTETYENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEARTNEAGTPLRAPTTEVGLATACRDSCYGELKLQIWERLYDGSKGKVILETKSSMAAVEIGGGPWFGTWKGDTSNTPELLKQALQ 468          

HSP 2 Score: 176.792 bits (447), Expect = 1.975e-45
Identity = 78/119 (65.55%), Postives = 97/119 (81.51%), Query Frame = -2
Query: 2825 TSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3181
            T ++ +D+ +SV PVYVPT  NR+ RTPHSGYHFDGT R+FFEGWYF+VSIPE+++SFCFMYSVENP FR+ L+ LE   +GPRFTGVGAQILGA D+Y+CQY  +S NFWG +   +L
Sbjct:   52 TPNSETDK-ISVKPVYVPTSPNRELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELVL 169          

HSP 3 Score: 83.5741 bits (205), Expect = 3.120e-15
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = -2
Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092
            RHEL+LGNTF A   ++ P+KEVPPEEFNR+V EGFQ +P WHQG I DDGR
Sbjct:  164 RHELVLGNTFSAVPGAKAPNKEVPPEEFNRRVSEGFQATPFWHQGHICDDGR 215          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: TOCC_ORYSJ (Probable tocopherol cyclase, chloroplastic OS=Oryza sativa subsp. japonica GN=VTE1 PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 4.373e-121
Identity = 177/254 (69.69%), Postives = 209/254 (82.28%), Query Frame = -3
Query:  688 NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTAL 1449
            + R+ Y   V+ ARWEYSTRP YGWGDV SKQKSTAGWLAAFP FEPHWQICMA GLSTGWIEWDGERFEF++APSYSEKNWG GFPRKW+W QCNVF GASG+++LT AGGLR++ GL ET+E+ +LIG+HY+G FYEFVPW G V+W+IA WG+W ++ ENK HLVE+EATT + GT L APT+EAGL PAC DTC GDL L++WEK   G KGK+ILD  S+MAALEVGGGPWFN WKG T + E++   +
Sbjct:  198 DGRSKYVPNVQTARWEYSTRPVYGWGDVTSKQKSTAGWLAAFPFFEPHWQICMAGGLSTGWIEWDGERFEFENAPSYSEKNWGAGFPRKWYWVQCNVFSGASGEVALTAAGGLRKI-GLGETYESPSLIGIHYEGKFYEFVPWTGTVSWDIAPWGHWKLSGENKNHLVEIEATTKEPGTALRAPTMEAGLVPACKDTCYGDLRLQMWEKRNDGGKGKMILDATSNMAALEVGGGPWFNGWKGTTVSNEIVNNVV 450          

HSP 2 Score: 167.933 bits (424), Expect = 1.469e-42
Identity = 73/106 (68.87%), Postives = 88/106 (83.02%), Query Frame = -2
Query: 2825 PVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3142
            PVY PTP +R  RTPHSGYH+DGT R FFEGWYFKVSIPE +QSFCFMYSVENP+FR  ++ L+ + HG RFTGVGAQILGA D+YICQ++++S NFWGS+   +L
Sbjct:   49 PVYAPTPRDRALRTPHSGYHYDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDRVIHGSRFTGVGAQILGADDKYICQFTEKSNNFWGSRHELML 154          

HSP 3 Score: 92.4337 bits (228), Expect = 4.786e-18
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = -2
Query: 1919 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGRCLLLLN 2092
            RHEL+LGNTF+ N  S PP  EVPP+EF+ +VLEGFQV+P+WHQGFIRDDGR   + N
Sbjct:  149 RHELMLGNTFIPNNGSTPPEGEVPPQEFSSRVLEGFQVTPIWHQGFIRDDGRSKYVPN 206          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: TOCC_MAIZE (Probable tocopherol cyclase, chloroplastic OS=Zea mays GN=SDX1 PE=2 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 1.719e-119
Identity = 176/244 (72.13%), Postives = 206/244 (84.43%), Query Frame = -3
Query:  718 NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKT 1449
            + R++Y   V+ ARWEYSTRP YGWGDV SKQ STAGWLAAFP FEPHWQICMA GLSTGWIEWDGERFEF++APSYSEKNWGGGFPRKW+W QCNVF GASG++SLT AGGLR++ GL +T+E+ +LIG+HY+G F+EFVPW G V+W+I  WG W ++ ENKTHLVE+EATT +SGT L APT+EAGL PAC DTC GDL L++WEK   GSKG++ILD  S+MAALEVGGGPWFN WKG T
Sbjct:  202 DGRSNYVPNVQTARWEYSTRPVYGWGDVKSKQLSTAGWLAAFPFFEPHWQICMARGLSTGWIEWDGERFEFENAPSYSEKNWGGGFPRKWYWIQCNVFPGASGEVSLTAAGGLRKI-GLGDTYESPSLIGIHYEGQFFEFVPWTGTVSWDIGLWGLWKMSGENKTHLVEIEATTAESGTALRAPTIEAGLVPACKDTCYGDLRLQLWEKKYDGSKGEMILDATSNMAALEVGGGPWFNGWKGTT 444          

HSP 2 Score: 169.088 bits (427), Expect = 6.004e-43
Identity = 74/110 (67.27%), Postives = 89/110 (80.91%), Query Frame = -2
Query: 2825 VSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3154
             +  P+Y PTP +R  RTPHSGYHFDGT R FFEGWYFKVSIPE +QSFCFMYSVENP+FR  ++ L+ L + PRFTGVGAQILGA D+YICQ+S++S NFWGS+   +L
Sbjct:   49 AAAAPIYTPTPQDRSLRTPHSGYHFDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDKLLYRPRFTGVGAQILGADDKYICQFSEKSNNFWGSRHELML 158          

HSP 3 Score: 93.5893 bits (231), Expect = 1.926e-18
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = -2
Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092
            RHEL+LGNTF++NK S PP  EVPP++F+R+VLEG QV+P+WHQGFIRDDGR
Sbjct:  153 RHELMLGNTFISNKESTPPQGEVPPQDFSRRVLEGLQVTPIWHQGFIRDDGR 204          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR6_ARATH (Protein NRT1/ PTR FAMILY 1.2 OS=Arabidopsis thaliana GN=NPF1.2 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.917e-39
Identity = 69/152 (45.39%), Postives = 101/152 (66.45%), Query Frame = 2
Query:  122 CTIDRVEELKALIRVIPVWSTGIIIAVTYSLDSFAVIQTSTMDRHIT---PKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568
            CT D+VEELKALI+VIP+WSTGI++++  S  SF ++Q ++MDR ++     F +PAGSFG   II   + + LYDR ++PLA K++G P  LS K RM  GL  S  AM    +V+  RR+ AI +G ++   A+V ISA+W++P  ++ G
Sbjct:  320 CTTDKVEELKALIKVIPIWSTGIMMSINTSQSSFQLLQATSMDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRGRPFRLSVKLRMGLGLFMSFLAMAISAMVESFRRKKAISQGYANNSNAVVDISAMWLVPQYVLHG 471          

HSP 2 Score: 43.8986 bits (102), Expect = 2.917e-39
Identity = 18/29 (62.07%), Postives = 23/29 (79.31%), Query Frame = 1
Query:   34 LRFLNKACVIKNPQQDLTSDGNASNPWSL 120
            LRFLNKAC+I N ++++ SDG A NPW L
Sbjct:  291 LRFLNKACLISNREEEIGSDGFALNPWRL 319          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR32_ARATH (Protein NRT1/ PTR FAMILY 1.1 OS=Arabidopsis thaliana GN=NPF1.1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 5.748e-39
Identity = 70/151 (46.36%), Postives = 102/151 (67.55%), Query Frame = 2
Query:  122 CTIDRVEELKALIRVIPVWSTGIIIAVTYSLDSFAVIQTSTMDRHITPK--FDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568
            CT D+VE+LKAL++VIPVWSTGI++++  S +SF ++Q  +MDR ++    F IPAGSFG   II  +  + LYDR ILPLA K++G PV ++ K RM  GL  S  AM     V++ RR+ AI +GL++   + V ISA+W++P  ++ G
Sbjct:  321 CTTDQVEKLKALVKVIPVWSTGIMMSINVSQNSFQLLQAKSMDRRLSSNSTFQIPAGSFGMFTIIALISWVVLYDRAILPLASKIRGRPVRVNVKIRMGLGLFISFLAMAVSATVEHYRRKTAISQGLANDANSTVSISAMWLVPQYVLHG 471          

HSP 2 Score: 40.4318 bits (93), Expect = 5.748e-39
Identity = 19/29 (65.52%), Postives = 20/29 (68.97%), Query Frame = 1
Query:   34 LRFLNKACVIKNPQQDLTSDGNASNPWSL 120
            LRFLNKAC I N  +DL SDG A N W L
Sbjct:  292 LRFLNKACAISNRDEDLGSDGLALNQWRL 320          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR48_ARATH (Protein NRT1/ PTR FAMILY 1.3 OS=Arabidopsis thaliana GN=NPF1.3 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.139e-24
Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 2
Query:  122 CTIDRVEELKALIRVIPVWSTGIIIA-VTYSLDSFAVIQTSTMDRH-ITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSGWVRISLELDRQNSF 610
            C + +VE+LK+LI VIP+WSTGII++ VT    SF V+Q  TMDRH     F+IP GS+G  ++I+F++ + LYD +I+PL      EP  L    RM  G + S   + +L   +Y RR+ A       + ++   +SA+W+LPY I+ G +  +L    QN F
Sbjct:  242 CRVQQVEDLKSLINVIPIWSTGIILSLVTACQVSFIVLQAKTMDRHTFIQGFEIPPGSYGIFLVISFLLFLGLYDLVIVPLLSWALREPFRLGVMVRMWAGYVISVLCISALAATEYARRKTA-------RDESGTKLSAMWLLPYMILGG-IAEALNTIAQNEF 398          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR18_ARATH (Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana GN=NPF3.1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.448e-22
Identity = 56/159 (35.22%), Postives = 89/159 (55.97%), Query Frame = 2
Query:   95 AMLQTHGVFCTIDRVEELKALIRVIPVWSTGIIIAVTYSLD-SFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568
              +  H    T+ RVEELK++IR+ P+ ++GI++   Y+   +F++ Q  TM+RH+T  F IPAGS      +  +  I  YDR+ + +A K  G    ++F  RM  G + S  A +    V+  R+ +AI+ GL DKP  +V IS LW++P   + G
Sbjct:  311 GQIPNHWRLSTVHRVEELKSVIRMGPIGASGILLITAYAQQGTFSLQQAKTMNRHLTNSFQIPAGSMSVFTTVAMLTTIIFYDRVFVKVARKFTGLERGITFLHRMGIGFVISIIATLVAGFVEVKRKSVAIEHGLLDKPHTIVPISFLWLIPQYGLHG 469          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR21_ARATH (Protein NRT1/ PTR FAMILY 2.13 OS=Arabidopsis thaliana GN=NPF2.13 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.707e-21
Identity = 52/150 (34.67%), Postives = 87/150 (58.00%), Query Frame = 2
Query:  122 CTIDRVEELKALIRVIPVWSTGII-IAVTYSLDSFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568
            C++  VEE+K LIR++P+WS GII +A   +  +F V Q   MDR++ PKF+IPAGS     ++T  + +  YDR+ +P   ++ G    ++  QR+ TG++ +  +M+   +V+ +RR  +I  G    P  M  +S  W+ P  I+ G
Sbjct:  350 CSVQEVEEVKCLIRIVPIWSAGIISLAAMTTQGTFTVSQALKMDRNLGPKFEIPAGSLSVISLLTIGIFLPFYDRVFVPFMRRITGHKSGITLLQRIGTGIVFAIFSMIVAGIVERMRRIRSINAG---DPTGMTPMSVFWLSPQLILMG 496          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR46_ARATH (Protein NRT1/ PTR FAMILY 5.4 OS=Arabidopsis thaliana GN=NPF5.4 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.115e-20
Identity = 54/150 (36.00%), Postives = 91/150 (60.67%), Query Frame = 2
Query:  122 CTIDRVEELKALIRVIPVWSTGIIIAVTYS-LDSFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568
            CT+++VEE+K ++R+IP+W + I+   T + L++F + Q S MDR I   F IP  +F + V +T ++ I LYDR+ +P+  K+      ++  QR+  GL  +   MV   +V+  R ++A   GL D P+ +V +S+LW+LP  I+ G
Sbjct:  296 CTVNQVEEVKLILRLIPIWISLIMFCATLTQLNTFFLKQGSMMDRTIGNHFTIPPAAFQSIVGVTILILIPLYDRVFVPMVRKITNHHSGITSLQRIGVGLFVATFNMVICGLVEAKRLKVARDHGLIDSPKEVVPMSSLWLLPQYILVG 445          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR9_ARATH (Protein NRT1/ PTR FAMILY 5.10 OS=Arabidopsis thaliana GN=NPF5.10 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.407e-20
Identity = 50/150 (33.33%), Postives = 89/150 (59.33%), Query Frame = 2
Query:  122 CTIDRVEELKALIRVIPVWSTGIIIAVTYSLD-SFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568
            C+ID +EE K+++R+ P+W T ++ AV ++   +F   Q +TM+R ITP + I   +  + + ++ V+ I +YDR+++P+A     +P  ++  QR+ TG+  S  AMV   +V+  R + A   GL D P A V +S  W++P  ++ G
Sbjct:  305 CSIDELEEAKSVLRLAPIWLTCLVYAVVFAQSPTFFTKQGATMERSITPGYKISPATLQSFISLSIVIFIPIYDRVLIPIARSFTHKPGGITMLQRIGTGIFLSFLAMVVAALVEMKRLKTAADYGLVDSPDATVPMSVWWLVPQYVLFG 454          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2QJU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G027200 PE=4 SV=1)

HSP 1 Score: 501.901 bits (1291), Expect = 4.342e-164
Identity = 248/277 (89.53%), Postives = 255/277 (92.06%), Query Frame = -3
Query:  685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506
            K+L  +Q+   S L   GF C   RT Y +TV  ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGA GKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ
Sbjct:   43 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVNTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGARGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 316          

HSP 2 Score: 100.138 bits (248), Expect = 4.199e-19
Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = -2
Query: 1937 IGRHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2098
            +G+HEL LGNTF+ANK SRPP KEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR
Sbjct:   11 LGKHELALGNTFVANKASRPPGKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 64          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2PTW5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G027200 PE=4 SV=1)

HSP 1 Score: 502.286 bits (1292), Expect = 1.307e-163
Identity = 248/277 (89.53%), Postives = 255/277 (92.06%), Query Frame = -3
Query:  685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506
            K+L  +Q+   S L   GF C   RT Y +TV  ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGA GKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ
Sbjct:   84 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVNTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGARGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 357          

HSP 2 Score: 98.5969 bits (244), Expect = 1.763e-18
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = -2
Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092
            RHEL LGNTF+ANK SRPP KEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR
Sbjct:   54 RHELALGNTFVANKASRPPGKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 105          

HSP 3 Score: 97.0561 bits (240), Expect = 5.380e-18
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = -2
Query: 2840 MYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSK 3001
            MYSVENP F+R LT LE LQHGPRFTGVGAQ+LGA  +YICQYS+ESQNFWGS+
Sbjct:    1 MYSVENPAFKRTLTPLEMLQHGPRFTGVGAQVLGANGKYICQYSEESQNFWGSR 54          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2LTZ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G027200 PE=4 SV=1)

HSP 1 Score: 506.523 bits (1303), Expect = 2.003e-163
Identity = 248/277 (89.53%), Postives = 255/277 (92.06%), Query Frame = -3
Query:  685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506
            K+L  +Q+   S L   GF C   RT Y +TV  ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGA GKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ
Sbjct:  214 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVNTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGARGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 487          

HSP 2 Score: 266.159 bits (679), Expect = 2.332e-74
Identity = 128/188 (68.09%), Postives = 148/188 (78.72%), Query Frame = -2
Query: 2825 PTLNSINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3388
            P + S+N+L  FSSC+IGL SLNSK+ +K SQSS FN               SNSP++ACSS++  ++ETSS A+ R VSV+PVYVPTP NR+TRTPHSGYHFDGTTRQFFEGWYFKVSIP RKQSFCFMYSVENP F+R LT LE LQHGPRFTGVGAQ+LGA  +YICQYS+ESQNFWGS+    L
Sbjct:    3 PNIYSLNQLHQFSSCFIGLHSLNSKSTLKFSQSSTFNASPRELGPLRLGFR-SNSPVVACSSVSEIESETSSPAAKRSVSVSPVYVPTPVNRETRTPHSGYHFDGTTRQFFEGWYFKVSIPARKQSFCFMYSVENPAFKRTLTPLEMLQHGPRFTGVGAQVLGANGKYICQYSEESQNFWGSRHELAL 189          

HSP 3 Score: 101.679 bits (252), Expect = 6.009e-19
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = -2
Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092
            RHEL LGNTF+ANK SRPP KEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR
Sbjct:  184 RHELALGNTFVANKASRPPGKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 235          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0B0MHV0_GOSAR (Tocopherol cyclase, chloroplastic-like protein OS=Gossypium arboreum GN=F383_13574 PE=4 SV=1)

HSP 1 Score: 493.426 bits (1269), Expect = 2.519e-158
Identity = 244/277 (88.09%), Postives = 251/277 (90.61%), Query Frame = -3
Query:  685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506
            K+L  +Q+   S L   GF C   RT Y +TVK ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMAS     WIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLT AGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ
Sbjct:  215 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVKTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMAS-----WIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTAAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 483          

HSP 2 Score: 268.47 bits (685), Expect = 3.118e-75
Identity = 139/184 (75.54%), Postives = 156/184 (84.78%), Query Frame = -2
Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376
            S+N+L  FSSC+IGL S NSK+ +K SQSS FN   PR LRPLRLGFRSNSP++AC S++  +TETSS A+ R VSV+PVYVPTP NRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENP F+R LT LE LQHGPRFTGVGAQ+LGA  +YICQYS+ESQNFWGS+    L
Sbjct:    7 SLNQLHQFSSCFIGLHSQNSKSTLKFSQSSTFNAFSPRELRPLRLGFRSNSPVVACRSVSEIETETSSPAAKRSVSVSPVYVPTPVNRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPAFKRTLTPLEMLQHGPRFTGVGAQVLGAKGKYICQYSEESQNFWGSRHELTL 190          

HSP 3 Score: 102.834 bits (255), Expect = 2.474e-19
Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = -2
Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092
            RHEL LGNTF+ANK SRPPSKEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR
Sbjct:  185 RHELTLGNTFVANKASRPPSKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 236          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2Q9A5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1)

HSP 1 Score: 472.241 bits (1214), Expect = 4.451e-153
Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3
Query:  685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506
            K+L  +Q+   S L   GF   + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT  GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK  GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ
Sbjct:   22 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 295          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2UGJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1)

HSP 1 Score: 473.781 bits (1218), Expect = 5.370e-152
Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3
Query:  685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506
            K+L  +Q+   S L   GF   + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT  GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK  GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ
Sbjct:  132 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 405          

HSP 2 Score: 181.8 bits (460), Expect = 1.047e-45
Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = -2
Query: 2825 YHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3088
            YHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGS+   +L
Sbjct:   20 YHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSRHELIL 107          

HSP 3 Score: 115.931 bits (289), Expect = 6.855e-24
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = -2
Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092
            RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR
Sbjct:  102 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 153          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2TDW0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1)

HSP 1 Score: 476.863 bits (1226), Expect = 5.574e-152
Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3
Query:  685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506
            K+L  +Q+   S L   GF   + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT  GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK  GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ
Sbjct:  215 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 488          

HSP 2 Score: 299.671 bits (766), Expect = 4.846e-86
Identity = 176/184 (95.65%), Postives = 178/184 (96.74%), Query Frame = -2
Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376
            SINELRHFSSCYIGLRSLNSKT VKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIA TDTETSSTASDRPV VNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGSK   +L
Sbjct:    7 SINELRHFSSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDTETSSTASDRPVPVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSKHELIL 190          

HSP 3 Score: 110.923 bits (276), Expect = 6.312e-22
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = -2
Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092
            +HELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR
Sbjct:  185 KHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 236          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2RUB9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1)

HSP 1 Score: 476.863 bits (1226), Expect = 5.939e-152
Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3
Query:  685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506
            K+L  +Q+   S L   GF   + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT  GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK  GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ
Sbjct:  215 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 488          

HSP 2 Score: 298.516 bits (763), Expect = 1.197e-85
Identity = 175/184 (95.11%), Postives = 178/184 (96.74%), Query Frame = -2
Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376
            SINELRHFSSCYIGLRSLNSKT VKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIA TDTETSSTASDRPV VNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGS+   +L
Sbjct:    7 SINELRHFSSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDTETSSTASDRPVPVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSRHELIL 190          

HSP 3 Score: 112.079 bits (279), Expect = 2.672e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = -2
Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092
            RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR
Sbjct:  185 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 236          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A061GK03_THECC (Tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) isoform 1 OS=Theobroma cacao GN=TCM_037170 PE=4 SV=1)

HSP 1 Score: 454.521 bits (1168), Expect = 2.015e-143
Identity = 219/277 (79.06%), Postives = 237/277 (85.56%), Query Frame = -3
Query:  685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506
            K+L  +Q+   S L   GF   + RT+Y   VK ARWEYSTRP YGWG+VGSKQKSTAGWLAA PIFEPHWQICMA GLSTGWIEWD ERFEFQ+APSYSEKNWGGGFPRKWFWAQCNVFEGASG++SLT  GGLRQLPGLTETFEN ALIGVHYDG+FYEFVPWNGVV+WEIAQWG W + A+N+TH+ ELEATT D GTTL APT  AGL PAC DTC GDL LKIWEK  GG+KGKLILDVKSDMAALEVGGGPWFNTWKG+TTTPEV+K ALQ
Sbjct:  216 KVLEGFQV---SPLWHQGFIRDDGRTTYANIVKTARWEYSTRPIYGWGNVGSKQKSTAGWLAALPIFEPHWQICMAGGLSTGWIEWDSERFEFQNAPSYSEKNWGGGFPRKWFWAQCNVFEGASGEVSLTAGGGLRQLPGLTETFENAALIGVHYDGVFYEFVPWNGVVSWEIAQWGSWYMEAKNETHMAELEATTNDPGTTLRAPTTVAGLAPACKDTCFGDLRLKIWEKKSGGTKGKLILDVKSDMAALEVGGGPWFNTWKGETTTPEVIKNALQ 489          

HSP 2 Score: 273.092 bits (697), Expect = 1.014e-76
Identity = 145/189 (76.72%), Postives = 161/189 (85.19%), Query Frame = -2
Query: 2825 PTLNSINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDR-PVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3388
            P + S+NEL HFSSC IG R LNSK  VK SQSS FNG  PR LRPLR+GFRSNS IIACSS+A  +T TSS A++   VSVNPVYVPTPANR+ RTPHSGYHFDGTTRQFFEGWYFKV+IPE++QSFCFMYSVENP FRRKLT LE LQHGPRFTGVGAQILGAYD+YICQY++ESQNFWGS+   +L
Sbjct:    3 PNIYSVNELHHFSSCCIGFRPLNSKPTVKFSQSSTFNGFSPRGLRPLRVGFRSNSRIIACSSVAEPETGTSSPAAESSAVSVNPVYVPTPANRNARTPHSGYHFDGTTRQFFEGWYFKVAIPEQRQSFCFMYSVENPAFRRKLTPLEMLQHGPRFTGVGAQILGAYDKYICQYTEESQNFWGSRHELIL 191          

HSP 3 Score: 113.235 bits (282), Expect = 1.142e-22
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = -2
Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092
            RHELILGNTFLANK+SRPPSKEVPP+EFNRKVLEGFQVSPLWHQGFIRDDGR
Sbjct:  186 RHELILGNTFLANKDSRPPSKEVPPQEFNRKVLEGFQVSPLWHQGFIRDDGR 237          
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0B0N809_GOSAR (Tocopherol cyclase, chloroplastic-like protein OS=Gossypium arboreum GN=F383_11502 PE=4 SV=1)

HSP 1 Score: 452.595 bits (1163), Expect = 9.507e-143
Identity = 222/277 (80.14%), Postives = 239/277 (86.28%), Query Frame = -3
Query:  685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506
            K+L  +Q+   S L   GF   + RTSY RTVK A WEY+TRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA     GWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT  GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNG+++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+I  K  GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ
Sbjct:  215 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTACWEYTTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA-----GWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGILSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIRVKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 483          

HSP 2 Score: 324.709 bits (831), Expect = 5.473e-95
Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = -2
Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376
            SINELRHF SCYIGLRSLNSKT VKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIA TDTETSSTAS+RPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGS+   +L
Sbjct:    7 SINELRHFPSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDTETSSTASNRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSRHELIL 190          

HSP 3 Score: 114.005 bits (284), Expect = 6.363e-23
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = -2
Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092
            RHELILGNTFL NKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR
Sbjct:  185 RHELILGNTFLTNKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 236          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
TOCC_ARATH1.015e-12874.41Tocopherol cyclase, chloroplastic OS=Arabidopsis t... [more]
TOCC_ORYSJ4.373e-12169.69Probable tocopherol cyclase, chloroplastic OS=Oryz... [more]
TOCC_MAIZE1.719e-11972.13Probable tocopherol cyclase, chloroplastic OS=Zea ... [more]
PTR6_ARATH2.917e-3945.39Protein NRT1/ PTR FAMILY 1.2 OS=Arabidopsis thalia... [more]
PTR32_ARATH5.748e-3946.36Protein NRT1/ PTR FAMILY 1.1 OS=Arabidopsis thalia... [more]
PTR48_ARATH4.139e-2439.39Protein NRT1/ PTR FAMILY 1.3 OS=Arabidopsis thalia... [more]
PTR18_ARATH1.448e-2235.22Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thalia... [more]
PTR21_ARATH2.707e-2134.67Protein NRT1/ PTR FAMILY 2.13 OS=Arabidopsis thali... [more]
PTR46_ARATH1.115e-2036.00Protein NRT1/ PTR FAMILY 5.4 OS=Arabidopsis thalia... [more]
PTR9_ARATH6.407e-2033.33Protein NRT1/ PTR FAMILY 5.10 OS=Arabidopsis thali... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2QJU4_GOSRA4.342e-16489.53Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2PTW5_GOSRA1.307e-16389.53Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2LTZ7_GOSRA2.003e-16389.53Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0MHV0_GOSAR2.519e-15888.09Tocopherol cyclase, chloroplastic-like protein OS=... [more]
A0A0D2Q9A5_GOSRA4.451e-15383.39Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2UGJ8_GOSRA5.370e-15283.39Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2TDW0_GOSRA5.574e-15283.39Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2RUB9_GOSRA5.939e-15283.39Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061GK03_THECC2.015e-14379.06Tocopherol cyclase, chloroplast / vitamin E defici... [more]
A0A0B0N809_GOSAR9.507e-14380.14Tocopherol cyclase, chloroplastic-like protein OS=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025893Tocopherol cyclasePFAMPF14249Tocopherol_cyclcoord: 1..181
e-value: 1.2E-72
score: 244.8
NoneNo IPR availablePANTHERPTHR35309FAMILY NOT NAMEDcoord: 1..203
NoneNo IPR availablePANTHERPTHR35309:SF2TOCOPHEROL CYCLASE, CHLOROPLASTICcoord: 1..203

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0091728 ID=g.barbadense_cottongen_reftransV1_0091728; Name=g.barbadense_cottongen_reftransV1_0091728; organism=Gossypium barbadense; type=contig; length=3467bp
GGGAATAAAGTAACTGAAAATGGTCTCATTTCACTAAGGTTTCTGAATAA
AGCTTGTGTGATAAAGAACCCTCAACAGGACTTAACCTCTGATGGCAATG
CTTCAAACCCATGGAGTCTTTTGTACAATAGATCGAGTGGAAGAGCTGAA
AGCGTTAATCAGAGTGATACCGGTCTGGTCTACGGGAATCATAATCGCTG
TGACATATTCTTTGGATTCTTTTGCAGTTATTCAAACAAGTACCATGGAC
CGACATATAACTCCAAAGTTTGATATTCCAGCAGGTTCATTTGGTGCGTC
TGTGATCATCACTTTTGTAGTAGGGATTGCTTTGTATGATCGGATAATTC
TTCCTTTAGCATTAAAAATGAAAGGGGAACCGGTTTGTCTTAGTTTTAAG
CAAAGAATGGAGACCGGACTTCTTTGCTCTTGTGCAGCCATGGTTTCATT
AACAGTTGTGAAGTATATTCGACGAGAAATTGCAATCCAAGAAGGGCTTT
CGGATAAACCACAAGCCATGGTGCACATTTCTGCACTATGGATTCTGCCA
TATGCTATCATGTCCGGCTGGGTTCGGATTTCATTGGAATTGGACAGACA
GAATTCTTTTACTCTGAACCATGTCCAGTGTTGCAGCCAATCTTCAAATG
TTAGGAGCCTCTTCCGGAAGTCTGGTGGTGAGTTCTGAAGAGCAGTTTTA
AGGACCTCTGGTGTAGTGGTCTTCCCTTTCCAAGTGTTGAACCATGGCCC
TCCTCCTACTTCTAGTGCCGCCATGTCACTTTTAACATCCAAGATCAGCT
TGCCTTTACTGCCACCAACATTTTTTTCCCAGATCTTCAATGTTAGATCA
CCTAAACAAGTGTCTAAACAAGCTGGAGTAAGACCAGCCTCTACTGTTGG
AGCAAGCAATGTCGTACCTGAATCAGTTGTTGTTGCCTCTAACTCAACCA
AGTGTGTTTTGTTTTCTGCAGCAATGTTCCAGTAACCCCACTGGGCAATT
TCCCAAGTTACAACACCATTCCATGGCACAAATTCATAGAAAATTCCATC
ATAGTGCACTCCAATCAATGCAGTATTTTCGAAGGTCTCAGTCAGTCCAG
GCAGCTGCCTTAATCCACCAGCCGTGGTCAGAGAAATTTTTCCGCTAGCA
CCTTCAAAGACGTTACATTGAGCCCAAAACCATTTTCTAGGGAAGCCTCC
ACCCCAATTCTTTTCTGAATATGAAGGGGCATCTTGAAACTCAAACCTTT
CACCATCCCACTCTATCCAGCCTGTTGAAAGTCCACTGGCCATGCAAATT
TGCCAATGGGGTTCGAATATGGGAAAAGCTGCAAGCCAGCCAGCTGTTGA
CTTCTGCTTGGACCCAACATCACCCCATCCATAGGTGGGGCGAGTACTGT
ACTCCCAACGTGCAGCTTTAACAGTTCTTGTATAAGATGTCCTGCAATTA
AAACCTAAACCAAGTAAACAGGATTACCGAAATAACTGATAGCGACTGAG
AAGTTTTGCTCAATTCTAATTTTGAGAACCTAAAAAGTAACAAATCACAA
CATAGACATTTGAATGAAAATAGGAATGGATCTTGATAGAAGAACCACTT
CTTTTCTGATGGCATGTTTGTTATGCCAACGGTTATACAAGGGAGATCAC
TATGCAGAAAGAATGCCTCAACAAGGGGGCATAGGAAAATCATCAAAATA
GCAATTTTTTAATCTTCTCGTAAAGGAATAACACTATTAATTCTTCTGGG
ATATCAATAAAAGGATATTTTGTTTCTTCACAGCATGACAAATAAGTCTA
GTGCACATTCACTGCTAATTAAATGCTTTACTTCTCTGTAGAAAGGAGCA
AAAACGACCATAGAATACAACAAAGTAAGGGTTTATTACATATGTTTATA
TTAAAATCATGCTTATGGATTCAACAAGAGGAGGCACCTGCCATCATCAC
GAATAAAGCCTTGATGCCAAAGTGGGCTAACTTGAAAGCCCTCCAAAACT
TTTCTATTGAATTCCTCAGGAGGGACCTCCTTACTTGGAGGTCGTGAGTT
TTTGTTGGCTAAAAAAGTATTCCCCAATATCAGCTCATGCCTGCCTATGC
ATTAAAAAGTTATAAATTAGGCATAGAACGTCACTCAATTATGCATTTCA
TCACTGCACTATTAAGGTATAAACTTGAGAAACACCAAAAGACATATGAT
GATAAGAGTAAAATAAATATAGCTAATAACTAAATAGATACAACTGCACT
CAGTAATAAACATGAAGCTTGGAGAACCAAAGACTTTCTAGCGAGAGGCC
AAAATAAAATAAATTTGAATGGCCCAAAATTAGAAGTTTAAAACAACCGA
AAAGGATCTTTGAAACCTGAGACAAACCAGATATCAGAAAGGTTTTGAAT
TGCTAAAGTCTAACAAGACCAAAAGATTAAGTGACGATGGTGCATAAAAA
TGAATGAAACATCATAGTGCAATAAAATGCAGAGGGTGAAGTGAATTAAA
ATCAAGTTAAATTAATGTATCAACATTTAATTAGAAAGTTCAGGTTAAAT
GCCTGAGAACATATTCATATAGATTAACTTTCTATCTTGCTAGATATCCA
AGAACAATTATAGGAGATAGCTTCCCACCATAAATGCTAGCTTCCTCAAA
AGGTAATATGATAAAATTTTCTACGATGAAGTCAACAAGTAGTTAATCGA
GCAGCAACTATACAAAATAAGTGTCTTTTACACCCAGTAGATTGTAGTTT
CATTACTACATAATCAATCAGGTGCAATGGGCGGCTGTAATAAGACCAGT
CCTTAGATTAAAATCTGATGAAACCAATAAAGTAGAAAACTTACTTCCCC
AAAAGTTCTGAGATTCATCACTGTATTGGCATATATACTCGTCATAAGCA
CCAAGGATTTGTGCCCCAACTCCTGTAAATCTAGGTCCGTGCTGCAGTGT
TTCCAATTGGGTCAGTTTCCTCCTAAATACGGGATTCTCCACCGAGTACA
TGAAGCAAAAGCTCTGTTTTCGTTCTGGGATTGATACCTTAAAGTACCAA
CCCTCAAAAAATTGTCGAGTGGTTCCATCAAAGTGGTACCCGCTGTGAGG
AGTTCGAGTGTCTCGATTAGCCGGCGTGGGAACATAAACCGGATTGACAG
AGACGGGTCTATCGGATGCCGTAGAAGAAGTTTCGGTATCAGTCCCAGCG
ATGGAGCTGCATGCGATGATCGGCGAGTTCGATCGAAACCCTAACCTGAG
AGGGCGGAGGCGTCTAGGAAATAGTCCATTGAAGTTAGAAGATTGGGATA
ATTTAACGGGGGTTTTGGAGTTTAGAGAACGAAGACCAATATAACAAGAA
GAGAAATGGCGAAGCTCGTTGATAGAGTTGAGGGTTGGAAGGAAAGGGGA
AGAAGAATGAAAAAAAGAAGATGCTTCAGACGTGAGAATGAAAAAGAGGT
AGAAGGGTAAAGTTGAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR025893Tocopherol_cyclase
Vocabulary: Molecular Function
TermDefinition
GO:0009976tocopherol cyclase activity