g.barbadense_cottongen_reftransV1_0094846, g.barbadense_cottongen_reftransV1_0094846 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy Swiss-Prot
Match: DCC1_MOUSE (Sister chromatid cohesion protein DCC1 OS=Mus musculus GN=DSCC1 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.493e-41 Identity = 115/324 (35.49%), Postives = 164/324 (50.62%), Query Frame = -3 Query: 490 LRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYS---SDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLND---WSLDSLVEDKVVSVLESDG--FPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREG-KRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRS 1434 +RG DE AVLC+K KTY +K TSN + IP C T + E + + + EL P+L KLK +L EN Y S + A Y +DL+N +QAS++E+ A LQ L+A EI GYWRI++ D +++L H + L D WSLD + + L+ G P +++ HCL YG R + D + LDA ++C A +L+ K + F E W + +PE M D L+G L ++ + L V LP DRF+ LF R KW +D+ PYI+DL + ALL KY+R S Sbjct: 70 IRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIP--GCKTPDQLKEEETPSAIVHTEIFGFSNNYWELRRCRPKLKKLKRLLMENTYEGPDSQKEEDASRSKYTTEDLLNHIQASEEEIMAQLQVLNACEIGGYWRILE---FDYEIKLLNHVTQLVDSESWSLDRV---PLTVCLQELGPLEPEEMIEHCLKCYGKRYVDK-DDVYFELDADKICRVTAEMLLQNAVKFNLAEFQEVWQQSVPEGMTTRLDQLKGLALVDRNSRPEIIFLLKVDDLPEGTQDRFNSLFSLREKWTEEDITPYIQDLCGEKQTIGALLTKYSRSS 384
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy Swiss-Prot
Match: DCC1_DANRE (Sister chromatid cohesion protein DCC1 OS=Danio rerio GN=dscc1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.136e-38 Identity = 110/323 (34.06%), Postives = 161/323 (49.85%), Query Frame = -3 Query: 490 VTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEAST---AMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGF--PRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREG-KRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRS 1440 + +RG DE AVLC++ KTY +K TSN + +P C T + Q+ + + EL PRL KLK +L EN Y A G Y +DL+ ++QAS +EL+A L + A EIDG+WRI+D D +++L H + L D S + + LE G P+ ++ HCLN YG R + + ++ LD +VC A+ +L+ K + F E W + +PE M D L G L ++ + L V LP +RF+ LF R KW D+EPYI+DL ++ ALL K+ R S Sbjct: 58 LIIRGDKDEHAVLCSEDKTYDLKIADTSNLLLFVP--GCKTPDQLSDIPASPQLMHTQIWGFSNCYWELRRQRPRLKKLKKLLMENPYDGPPVGMQEEAPGLKYSMEDLLERIQASKEELEAHLGNVHACEIDGFWRILD---FDYEMKLLGHVTQLVDSESWSFSKVPLSVCLEELGSLEPKAMIEHCLNCYGRRHSDEDNQVMYALDEDKVCRATAQLLLQNAVKFNLSEFQEVWQQSVPEGMGTRLDQLRGLALIDRSSKPETISLLRVEDLPEDTLERFNSLFSLREKWTQDDIEPYIQDLCGEKQTTGALLTKHARSS 375
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy Swiss-Prot
Match: DCC1_XENTR (Sister chromatid cohesion protein DCC1 OS=Xenopus tropicalis GN=dscc1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.326e-37 Identity = 104/324 (32.10%), Postives = 159/324 (49.07%), Query Frame = -3 Query: 490 VTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGD--LYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLND---WSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSR-VEEAMDGGVWRLDARRVCVHFARGILREG-KRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRS 1440 + +RG + AVLC++ KTY +K TSN + IP C T + + + + + EL P+L KLK +L EN Y+ E D L+ +DL+N +QAS++EL L+A+ A I+G+WR++D D +++L H + L D WS + + L S P +++ HCL YG R ++E G + LD ++C A +L+ K + F E W + +PE M D L+G L ++ + L LP +RF+ LF R KW D+ PYI+DL + ALL KY R S Sbjct: 59 LVIRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIP--GCKTPDQLPADQQPLTIINCEIAGFSNHYWELRRCRPKLKKLKKLLMENTYNGPENERESQDNSLHTTEDLLNMIQASNEELVDHLKAIHACSINGFWRLLD---FDYEMKLLNHITQLIDSESWSFSKVPLPVCLQELRSLE-PEEMIEHCLTCYGKRLIDEGTGGDFFALDEDKICRATALMLLQNAVKFNLAEFQEVWQQSVPEGMNTRLDQLKGLALVDRTSRPETIFLLKTEDLPEDTQERFNTLFGMREKWAEADIAPYIKDLCGEKQTIGALLTKYARSS 376
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy Swiss-Prot
Match: DCC1_HUMAN (Sister chromatid cohesion protein DCC1 OS=Homo sapiens GN=DSCC1 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 5.218e-36 Identity = 109/327 (33.33%), Postives = 168/327 (51.38%), Query Frame = -3 Query: 490 VTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYS---SDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLND---WSLDSLVEDKVVSVLESDG--FPRKLVYHCLNVYGSRVEEAMDGGVW-RLDARRVCVHFARGILREG-KRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRS 1440 + +RG DE AVLC+K KTY +K TSN + IP C T + E+ + + + EL P+L KLK +L EN Y S + + Y +DL++++QAS++E+ LQ L+A +I GYWRI++ D +++L H + L D WS + + + L+ G P +++ HCL YG + + +G V+ LDA ++C AR +L+ K + F E W + +PE M S D L+G L ++ + L V LP +RF+ LF R KW +D+ PYI+DL + ALL KY+ S Sbjct: 62 LVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIP--GCKTPDQLKKEDSHCNIIHTEIFGFSNNYWELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNACKIGGYWRILE---FDYEMKLLNHVTQLVDSESWSFGKV---PLNTCLQELGPLEPEEMIEHCLKCYGKKYVD--EGEVYFELDADKICRAAARMLLQNAVKFNLAEFQEVWQQSVPEGMVTSLDQLKGLALVDRHSRPEIIFLLKVDDLPEDNQERFNSLFSLREKWTEEDIAPYIQDLCGEKQTIGALLTKYSHSS 378
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy Swiss-Prot
Match: DCC1_DICDI (Probable sister chromatid cohesion protein DCC1 OS=Dictyostelium discoideum GN=DDB_G0271400 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 4.784e-34 Identity = 93/346 (26.88%), Postives = 172/346 (49.71%), Query Frame = -3 Query: 496 QRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVA-PGNMELVEVAPRLDKLKSILS----ENLYSSDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSR-----------------VEEAMDGGVWRLDARRVCVHFARGIL---REGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVL----TEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTR 1446 +++ ++G ++AVLCT KT++++ TSNS+ L+ S ++ IKVA ++EL E+ P+L+ LK +L +N ++ +G + +D++I+++Q+S+ E++ L L+ + + ++ E Y IL ++L + + W LD++ DK + + + P ++ HCL +Y + ++ D + LD +VC+ A+ +L + K E FM+ W +P E+QP+F ML+G + + E V+ ++ S LPT P RF LF+ +W D+EP+I+ PG S E +L Y+R Sbjct: 40 KKLVIKGSLTDEAVLCTDDKTFTIRAGHTSNSMLLV-------SKDTNK------------IKVALQYHLELTEIQPKLNVLKDLLYSKAIDNSLDFEDDENLLG--FSFDEIIDRIQSSEKEIQQYLLKLNTLIYKNRYIVLSENYEFKILELILSEATIGAWKLDNIPIDKCIENIRA---PEFIIKHCLQLYSKQKSPTNSGGGGEEIKGGGGDDNNDENICSLDFNKVCIFRAKQLLTLSNKSNMKFEDFMDNWKDTLPIEIQPNFSMLKGIAILIPSSSTNPKEKSVKFINESILPTIPKARFKELFQISTRWSIDDIEPFIKSTIPPGNSLEQFILTYSR 361
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy Swiss-Prot
Match: DCC1_XENLA (Sister chromatid cohesion protein DCC1 OS=Xenopus laevis GN=dscc1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.024e-33 Identity = 102/324 (31.48%), Postives = 155/324 (47.84%), Query Frame = -3 Query: 490 VTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDE---ASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLND---WSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREG-KRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRS 1440 + +RG + AVLC++ KTY +K TSN + IP C + + V + + EL P+L KLK +L EN Y+ E S+ LY +DL++ +Q+S +EL L+A+ A I G WR++D D +++L H + L D WS + + L S P +++ HCL YG R+ E G + LD ++C A +L+ K + F E W + +P+ M D L+G L ++ + L LP +RF+ LF R KW D+ PYI+DL + ALL KY R S Sbjct: 59 LVIRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIP--GCKLPDQLPADQQPLSVIHCEIAGFSNHYWELRRCRPKLKKLKKLLMENTYNGPENESESSQETSLYTTEDLLSVIQSSTEELMDHLKAIHACNIKGIWRLLD---FDYEMKLLNHITQLIDSESWSFSKVPLQVCLQELRSLE-PEEMIEHCLTCYGKRLMEE-GGDCFALDEDKICRATALMLLQNAVKFNLAEFQEVWQQSVPDGMNTRLDQLKGLALVDRTSRPETIFLLQTEDLPEDTQERFNTLFGMREKWTEADIAPYIQDLCGEKQTIGALLTKYARSS 375
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy Swiss-Prot
Match: DCC1_YEAST (Sister chromatid cohesion protein DCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCC1 PE=1 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 5.504e-10 Identity = 52/205 (25.37%), Postives = 100/205 (48.78%), Query Frame = -3 Query: 487 DGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSL-VEDKVVSVL-----ESDGFPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREG----KRKMESFMEEWLRMIPEEMQPSF------DMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQ 1053 DG I+ + ++ L +LL +++ L L VED +V E + + R+++ LN + + +EA + WRL + + LR+ ++ F+ +W + P P F DML G + V+ ++ S+LP P +RF +LF+ +++W+ +D++P I +LN G+ ++ ++KY RR + Sbjct: 174 DGVLCILSQDFLFKALHVLLMSAMAESLDLQHLNVEDTHHAVGKDIEDEFNPYTREIIETVLNKFAVQEQEA-ENNTWRLRIPFIAQWYGIQALRKYVSGISMPIDEFLIKWKSLFP----PFFPCDIDIDMLRGYHFKP---TDKTVQYIAKSTLPMDPKERFKVLFRLQSQWDLEDIKPLIEELNSRGMKIDSFIMKYARRKR 370
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Match: A0A0D2TFD4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G295600 PE=4 SV=1) HSP 1 Score: 738.028 bits (1904), Expect = 0.000e+0 Identity = 381/386 (98.70%), Postives = 382/386 (98.96%), Query Frame = -3 Query: 451 MMEQPHSCCKGAEVLLNLQPTSSVSIQYHPFFGSHXXXXXXXXXXXXXXXXLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRV-EEAMDGGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 1605 MMEQPHSCCKGAEVLLNLQPTSSVSIQYHPFFG HDDLVLLELDEKLLSDVLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFP KLVYHCLNVYGSRV EEAM GGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPA+RFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR Sbjct: 1 MMEQPHSCCKGAEVLLNLQPTSSVSIQYHPFFGPHDDLVLLELDEKLLSDVLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPCKLVYHCLNVYGSRVEEEAMGGGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPAERFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 386
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Match: A0A0B0NEV4_GOSAR (Sister chromatid cohesion DCC1 OS=Gossypium arboreum GN=F383_06580 PE=4 SV=1) HSP 1 Score: 735.332 bits (1897), Expect = 0.000e+0 Identity = 377/385 (97.92%), Postives = 379/385 (98.44%), Query Frame = -3 Query: 451 MMEQPHSCCKGAEVLLNLQPTSSVSIQYHPFFGSHXXXXXXXXXXXXXXXXLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 1605 MMEQPHSCCKGAE+LLNLQPTSSVSIQYHPFFG HDDLVLLELDEKLLSDVLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPAD ST HESGGENY QQV TASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIV EKYMDVILRMLLHNSVLNDWSLDSLVEDKVV+VLESDGFPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR Sbjct: 1 MMEQPHSCCKGAEMLLNLQPTSSVSIQYHPFFGPHDDLVLLELDEKLLSDVLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADYSTLHESGGENYNQQVPTASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVHEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVNVLESDGFPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 385
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Match: A0A0B0MZ26_GOSAR (Sister chromatid cohesion protein DCC1 OS=Gossypium arboreum GN=F383_01428 PE=4 SV=1) HSP 1 Score: 695.656 bits (1794), Expect = 0.000e+0 Identity = 359/367 (97.82%), Postives = 361/367 (98.37%), Query Frame = -3 Query: 451 QPTSSVSIQYHPFFGSHXXXXXXXXXXXXXXXXLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 1551 +PTSSVSIQYHPFFG HDDLVLLELDEKLLSDVLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPAD ST HESGGENY QQV TASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIV EKYMDVILRMLLHNSVLNDWSLDSLVEDKVV+VLESDGFPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR Sbjct: 3 KPTSSVSIQYHPFFGPHDDLVLLELDEKLLSDVLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADYSTLHESGGENYNQQVPTASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVHEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVNVLESDGFPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 369
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Match: A0A061FKD8_THECC (Zinc ion binding isoform 1 OS=Theobroma cacao GN=TCM_042348 PE=4 SV=1) HSP 1 Score: 626.32 bits (1614), Expect = 0.000e+0 Identity = 327/398 (82.16%), Postives = 350/398 (87.94%), Query Frame = -3 Query: 451 MMEQPHSCCKGAEVLLNLQPTSSVSIQYHPFFGSHXXXXXXXXXXXXXXXXLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPAD----CSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEA---------STAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 1605 MMEQP CCKGAEVLLNLQPTSSV IQYH FG HDDLVLLELDEKLL DVLYQRVTLRGQPDEDAV CTKSKTYSVK VGTSNSVFL+P AD C S + GE+YKQQV ASVIKVA GNMELVEVAPRLDKLKSI+SENLYSSDEA +M LY WDDL N VQASDDEL++GL+ALSA+EIDGYWRIVD+KYMD+ILRMLLHNSVLNDWSL++L+ED+VVSVLESDGFPRKL YHCL+VYGSRVEE MD GVWR+DARRVCVHFAR ILREGKRKMESFMEEW R IPEEMQ SFDMLEGEVLTEK+GVETWV A SVSSLP+TPA+RFSILFKER KWEWKDLEPY+RDLNVPGLSSEALLLKYTRR+QP+IDAEPVFSAR Sbjct: 1 MMEQPQPCCKGAEVLLNLQPTSSVWIQYHRLFGPHDDLVLLELDEKLLPDVLYQRVTLRGQPDEDAVFCTKSKTYSVKLVGTSNSVFLVPHADYSTFCENSQDCDGEDYKQQVG-ASVIKVASGNMELVEVAPRLDKLKSIISENLYSSDEALVMEDLEFMERSMRRLYTWDDLTNMVQASDDELRSGLKALSALEIDGYWRIVDQKYMDMILRMLLHNSVLNDWSLNTLIEDEVVSVLESDGFPRKLAYHCLHVYGSRVEEVMDKGVWRMDARRVCVHFAREILREGKRKMESFMEEWTRKIPEEMQASFDMLEGEVLTEKVGVETWVHAFSVSSLPSTPAERFSILFKERPKWEWKDLEPYVRDLNVPGLSSEALLLKYTRRTQPTIDAEPVFSAR 397
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Match: F6GVH5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00090 PE=4 SV=1) HSP 1 Score: 524.628 bits (1350), Expect = 9.293e-177 Identity = 284/397 (71.54%), Postives = 325/397 (81.86%), Query Frame = -3 Query: 451 MEQPHS-CCKGAEVLLNLQPTSSVSIQYHPFFGSHXXXXXXXXXXXXXXXXLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHES---GGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAM---------GDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRVEEAMDGGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 1602 MEQ S C GAE +LNLQP SS+SI YHP FG HDDL+LLE+D+KLL DVL+QRVTLRGQP+EDAVLCT+SKTYS+KFVG SNSVFLIPP D S HE E Q ASVIKVAPGNMELVEVAPRLDKLK +L EN ++S+E S +L+KW+DLI++VQASDDEL++GL+ALSAVEIDGYWRIVDEKYM IL MLLHNSVLNDWSLD+L ED+VV VLESDGFPR L HCL VYGS+V+E + VW+LD RR+C+HFAR IL++GKRKMESFMEEW++ IP+ MQ SFDMLEGEVLTEK GVETWVRA SVSSLP+ PA RFS+LF+ER KWEWKDL+PYIRDL VPGLSSE LLLKYTR++QP+ DAEPVFSAR Sbjct: 1 MEQKQSGCTGGAEAVLNLQPNSSISITYHPHFGPHDDLILLEIDDKLLPDVLHQRVTLRGQPNEDAVLCTQSKTYSIKFVGNSNSVFLIPPVDQSALHEHPQYSDEKDDDQRVVASVIKVAPGNMELVEVAPRLDKLKLLLLENPFTSEEVSEKEELEGMEEQKTNLFKWNDLIDRVQASDDELRSGLRALSAVEIDGYWRIVDEKYMGTILNMLLHNSVLNDWSLDALGEDEVVGVLESDGFPRTLGLHCLQVYGSKVDEGVGSCVWKLDERRLCIHFAREILKDGKRKMESFMEEWIQKIPDGMQASFDMLEGEVLTEKFGVETWVRAFSVSSLPSNPAARFSMLFQERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRKTQPNSDAEPVFSAR 397
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Match: A0A067H062_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015967mg PE=4 SV=1) HSP 1 Score: 523.087 bits (1346), Expect = 4.462e-176 Identity = 276/398 (69.35%), Postives = 324/398 (81.41%), Query Frame = -3 Query: 451 MEQPHSCCKGAEVLLNLQPTSSVSIQYHPFFGSHXXXXXXXXXXXXXXXXLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPAD----CSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEA---------STAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRVEEAMDGG-VWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 1602 MEQ HS C+ AE +LNLQ SS+SI YHP FG +DDL+LLELDEKLLSDVLYQRV+LRGQPDEDAVLCT+SKT+++KFVGTSNSVFLIPP+D C + + G+N QQ + ASVIKVAPGNMELVEVAPR+DKLK +LSEN YSS+EA + LY W+DL++KVQASDDEL++GL ALSAVE+ GYWRIVDE+YM +L MLLHNSVLNDWSLD+L+ED+VV+VL SDGFP L HCL VYGS+V+E +W+LD +RVCVHFAR IL G+RKMESFMEEW R IPE MQ SF++LEGEVLTE+LGV+ W+RA SVSSLP PA+RFSILF ER KWEWKDL+PYIRDL VPG S E LLLKYTRR+QP++DAEPV+SAR Sbjct: 1 MEQQHSGCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQ-SIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Match: V4U969_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020482mg PE=4 SV=1) HSP 1 Score: 523.087 bits (1346), Expect = 4.462e-176 Identity = 276/398 (69.35%), Postives = 324/398 (81.41%), Query Frame = -3 Query: 451 MEQPHSCCKGAEVLLNLQPTSSVSIQYHPFFGSHXXXXXXXXXXXXXXXXLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPAD----CSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEA---------STAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRVEEAMDGG-VWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 1602 MEQ HS C+ AE +LNLQ SS+SI YHP FG +DDL+LLELDEKLLSDVLYQRV+LRGQPDEDAVLCT+SKT+++KFVGTSNSVFLIPP+D C + + G+N QQ + ASVIKVAPGNMELVEVAPR+DKLK +LSEN YSS+EA + LY W+DL++KVQASDDEL++GL ALSAVE+ GYWRIVDE+YM +L MLLHNSVLNDWSLD+L+ED+VV+VL SDGFP L HCL VYGS+V+E +W+LD +RVCVHFAR IL G+RKMESFMEEW R IPE MQ SF++LEGEVLTE+LGV+ W+RA SVSSLP PA+RFSILF ER KWEWKDL+PYIRDL VPG S E LLLKYTRR+QP++DAEPV+SAR Sbjct: 1 MEQQHSGCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQ-SIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Match: B9SKI3_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0658930 PE=4 SV=1) HSP 1 Score: 518.079 bits (1333), Expect = 3.262e-174 Identity = 272/403 (67.49%), Postives = 315/403 (78.16%), Query Frame = -3 Query: 451 MEQPHSCCKGAEVLLNLQPTSSVSIQYHPFFGSHXXXXXXXXXXXXXXXXLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIP----------PADCSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSD--------EASTAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRVEEAMDGG-VWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 1602 M Q C GAE +LNLQP SSV++ YHP FGSHDDL+LLELD LL DVL+QRVTLRGQPDEDAVLCT+SKTYS+KFVGTSNS FLIP P DC + +Q+ A +IK+APGNMEL EV+PRLDKL+ +LSEN Y SD + LY WDDL+ VQAS++EL++GLQALSAVEIDGYWRIVDEKYMD ILRMLLHNS+LNDWSLD L ED+V ++L SDGFP KL +HCLNVYG++V + G VW+LD RRVCVHFAR LR GK+KME FM EWL+ IP+ M+ FDMLEGEVLTEKLGVETWVR S+SSLP+TPA+RFS+LF+ER+KWEWKDL PYIRDL VPGLSSEALLLKYTRR+QPS+DAEP+FSAR Sbjct: 1 MGQAEVGCSGAEAVLNLQPNSSVAVGYHPLFGSHDDLILLELDHNLLPDVLHQRVTLRGQPDEDAVLCTQSKTYSIKFVGTSNSSFLIPQSGQFSMYDYPEDCD------ARVHARQLF-APIIKLAPGNMELTEVSPRLDKLRLLLSENPYKSDGVLDMEDLDTGKDKTGLYTWDDLVGMVQASNNELRSGLQALSAVEIDGYWRIVDEKYMDTILRMLLHNSILNDWSLDFLNEDEVTNLLASDGFPHKLAHHCLNVYGTKVNGGVGTGYVWKLDERRVCVHFARETLRAGKKKMEDFMGEWLKKIPDGMEAKFDMLEGEVLTEKLGVETWVRPFSISSLPSTPAERFSMLFRERSKWEWKDLHPYIRDLKVPGLSSEALLLKYTRRTQPSLDAEPIFSAR 396
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Match: M5X5V2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025294mg PE=4 SV=1) HSP 1 Score: 510.375 bits (1313), Expect = 4.536e-171 Identity = 274/398 (68.84%), Postives = 308/398 (77.39%), Query Frame = -3 Query: 451 MEQPHSCCKGAEVLLNLQPTSSVSIQYHPFFGSHXXXXXXXXXXXXXXXXLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPADCSTSHESG---GENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEASTAMGDL----------YKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRVEEAMD-GGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 1602 ME P C GAE +LNL+P+SS+ I YHP FG HDDL+LLELD+KLL DVL+QRVT+RGQPDEDAVLCT+SKTY++K VGTSNSVFLIPP+ ES ENY + ASVIK+A GNMELVEVAPRLDKL+S+L EN Y +E M DL Y WDDLI KVQASDDEL+ GLQA SAVEI GYWRIVDEKYMD ILRMLLHNSVLNDWSL L ED VV+ LESDGFP KL HCL+VYGS+V E + +W+LD R+VCVHFAR ILR+G RKME FME+W R +PE M S DMLEGEVL EKLG ETW+RA SVSSLP PA+RFS+LFKER KWEWKDL PYI DL VPGLS+E LLLKYTRR+QP+ DAEPVFS R Sbjct: 1 MEPPSPDCNGAEAVLNLKPSSSIPITYHPLFGPHDDLILLELDQKLLPDVLHQRVTIRGQPDEDAVLCTESKTYAIKSVGTSNSVFLIPPSSQFNYFESPICCDENYHDPQSVASVIKIATGNMELVEVAPRLDKLRSLLFENPYRFEE-DVEMVDLEEMEGKNTGLYSWDDLIEKVQASDDELRTGLQAFSAVEIYGYWRIVDEKYMDRILRMLLHNSVLNDWSLSCLNEDDVVNALESDGFPHKLANHCLHVYGSKVIEGVSTSSIWKLDERKVCVHFARDILRDGNRKMERFMEDWARKVPEGMPASLDMLEGEVLIEKLGAETWIRAFSVSSLPYNPAERFSVLFKERPKWEWKDLHPYISDLRVPGLSAEGLLLKYTRRTQPTADAEPVFSIR 397
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Match: A0A067KEG2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16205 PE=4 SV=1) HSP 1 Score: 504.597 bits (1298), Expect = 7.765e-169 Identity = 273/397 (68.77%), Postives = 321/397 (80.86%), Query Frame = -3 Query: 451 MEQPHSCCKGAEVLLNLQPTSSVSIQYHPFFGSHXXXXXXXXXXXXXXXXLYQRVTLRGQPDEDAVLCTKSKTYSVKFVGTSNSVFLIPPAD----CSTSHESGGENYKQQVATASVIKVAPGNMELVEVAPRLDKLKSILSENLYSSDEA--------STAMGDLYKWDDLINKVQASDDELKAGLQALSAVEIDGYWRIVDEKYMDVILRMLLHNSVLNDWSLDSLVEDKVVSVLESDGFPRKLVYHCLNVYGSRVEEAMD-GGVWRLDARRVCVHFARGILREGKRKMESFMEEWLRMIPEEMQPSFDMLEGEVLTEKLGVETWVRALSVSSLPTTPADRFSILFKERAKWEWKDLEPYIRDLNVPGLSSEALLLKYTRRSQPSIDAEPVFSAR 1602 MEQ C GAE +LNLQP SS++I YHP FG+HDDL+LLELDEKLL +VL QRVTLRGQPDEDAVLCT+SKTY++KFVGTSNS FLIPP+D +S + G+ + QQ+ A VIKVAPGNMELVEV+P+LDKLK +L +N S+E LY+WDDL+++VQAS+DEL+ L ALSAVEIDGYWR+VDEKYMD+ILRMLLHN VLNDWS D+L E +VVSVL SDGFP KL HCL+VYGS+++ + +W+LD RRVCVHFAR IL+ GK+KME+FM EWL+ IP+ MQ SFDMLEGEVLTEKLGV+ WVRA SVSSLP+TPA+RF +LF+ERAKWEWKDL PYIRDL VPGLSSEALLLKYTRRSQPS DAEP+FSAR Sbjct: 1 MEQAEPGCSGAEAVLNLQPNSSIAIAYHPLFGTHDDLMLLELDEKLLPEVLQQRVTLRGQPDEDAVLCTQSKTYAIKFVGTSNSSFLIPPSDQFALSESSLDCNGKFHDQQL-LAPVIKVAPGNMELVEVSPKLDKLKLLLLQNPLRSEEVLETQDLDVEKNTTGLYRWDDLVDRVQASNDELRTSLLALSAVEIDGYWRVVDEKYMDIILRMLLHNLVLNDWSFDALNEGEVVSVLASDGFPAKLARHCLDVYGSKIDGVVGTSNMWKLDERRVCVHFAREILKAGKKKMENFMGEWLKEIPDGMQASFDMLEGEVLTEKLGVDMWVRAFSVSSLPSTPAERFLMLFRERAKWEWKDLYPYIRDLKVPGLSSEALLLKYTRRSQPSPDAEPIFSAR 396 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 7
BLAST of g.barbadense_cottongen_reftransV1_0094846 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094846 ID=g.barbadense_cottongen_reftransV1_0094846; Name=g.barbadense_cottongen_reftransV1_0094846; organism=Gossypium barbadense; type=contig; length=2294bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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