g.barbadense_cottongen_reftransV1_0094779, g.barbadense_cottongen_reftransV1_0094779 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094779
Unique Nameg.barbadense_cottongen_reftransV1_0094779
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2440
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At09chromosomeg.barbadense_cottongen_reftransV1_0094779:28..2440 .
At09:77631613..77634200 -
Homology
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 2.652e-130
Identity = 288/639 (45.07%), Postives = 385/639 (60.25%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSG-SVEEG----DRQPKQSEDADY-SSSANEGNWKSSXXXXXXXXXXX--XXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRST-AKSGIPM-PLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMG-QPMLSNGMATN------VSTRNGVPE-NIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVN-SEIKG-----SVGFM-PSYDIFNDLNQHKPQN---------WELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNR--NSTVISKAMFSAGDSTGHVNAQNSN-QHLNSLL--DNTVRVKSERVADTA---PAN-LYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            +KGVTHGA DYLIKPVRIEALKNIWQHVVRK++NEW   E SG S+E+     DRQ +  EDAD  SSS NEGN +SS++RK++E ++   +++D+S+LKKPRVVWSVELHQQFVAAVNQLG++                                       +AVPKKILE+MNVPGLTRENVASHLQKYR+YLRRL GVSQH  N+N+SFM  QD +FGPL      DLQ+LA TGQLP QSLA LQAAGLGR T AK G+ + PL+DQR+IF+FENPK+RFG+   Q ++N    NLLHG+PT    +   G                    Q+ Q++ +++ +A    RG           P +L  +G QP+LS+ ++        ++ RN +PE N R      +  T S+ N   N  ++LP +SFPL S PGI S+   V++QE+VN S+ KG     + GF  PSYDIFND  QH+  N         W+L+N+G++F+S+Q + +       + S          + R  ++TV+       G+   ++ + + N  HLN +     +VRVKSERVA+T    PAN L+ + + +EDLMSA LKQ+ I  P+ +N+F+FDGYSIDNI V
Sbjct:  116 LKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVD---------------------------------------KAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPTLAKPGMSVSPLVDQRSIFNFENPKIRFGDGHGQTMNNG---NLLHGVPTGSHMRLRPG--------------------QNVQSSGMMLPVADQLPRG----------GPSMLPSLGQQPILSSSVSRRSDLTGALAVRNSIPETNSRV-----LPTTHSVFN---NFPADLPRSSFPLASAPGI-SVPVSVSYQEEVNSSDAKGGSSAATAGFGNPSYDIFNDFPQHQQHNKNISNKLNDWDLRNMGLVFSSNQDAATATATAAFSTSEAYSSSSTQRKRRETDATVV-------GEHGQNLQSPSRNLYHLNHVFMDGGSVRVKSERVAETVTCPPANTLFHEQYNQEDLMSAFLKQEGI--PSVDNEFEFDGYSIDNIQV 664
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2)

HSP 1 Score: 408.297 bits (1048), Expect = 6.409e-129
Identity = 299/640 (46.72%), Postives = 373/640 (58.28%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEE-GDRQPKQ------------SEDA--DYSSSANEGN-WKSSXXXXXXXXXXX----XXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRS--TAKSGIPM-PLIDQRNIFSFENPKLRFGEA---QQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQA--RG--QMLNDSTVGLAPRLLSPMGQPMLSNGMA--TNVSTRNGVPENIRA--PSYNPVSQTSSMLNFPMNHTS-ELPGNSFPLVSTPGISSLAPK-VAFQEDVNSEIKGSVGF-MPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSN---QHLNSLLD---NTVRVKSERVA-DTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            +KGVTHGA DYLIKPVR+EALKNIWQHVVRKR++EW   E SGS+EE G+RQ +Q             EDA  D SSS NEGN W+SS R++ DE+  +    + +D S LKKPRVVWSVELHQQFVAAVNQLG+E                                       +AVPKKILELMNVPGLTRENVASHLQKYR+YLRRL GVSQH  NLNNSFM  QDA+FGPL      DLQALA TGQLPAQSLA LQAAGLGR    +KSG+P+  ++D+R+IFSF+N K RFGE      Q      Q NLLHG+PT ++ +   G   + Q      +  +  G+ S QNN +LM +A  Q+  RG   ML  S         S + QPMLSN ++  +  S RN +PE+ R    SY  ++   S  + P N+   ELP NSFPL S PGIS    K  ++QE+VNS      GF  PSYD+F      +  +W+L+N+G+ F+S Q       + +       +    S  +R++T +      A    G  + Q  +   QH     D    +VRVKSERVA DTA    +  +  +EDLMSALLKQ+  IAP +  +FDFD YSIDNIPV
Sbjct:  125 LKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVE---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNGFDLQALAVTGQLPAQSLAQLQAAGLGRPAMVSKSGLPVSSIVDERSIFSFDNTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQQQLPMGNRMSIQQ----QIAAVRAGN-SVQNNGMLMPLAGQQSLPRGPPPMLTSSQ--------SSIRQPMLSNRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSSSMPYNNFQPELPVNSFPLASAPGISVPVRKATSYQEEVNSS---EAGFTTPSYDMFTT----RQNDWDLRNIGIAFDSHQ-------DSESAAFSASEAYSSSSMSRHNTTV------AATEHGRNHQQPPSGMVQHHQVYADGNGGSVRVKSERVATDTATMAFHEQYSNQEDLMSALLKQEG-IAPVD-GEFDFDAYSIDNIPV 690
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR14_ARATH (Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.018e-37
Identity = 98/242 (40.50%), Postives = 129/242 (53.31%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-QSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTL-------KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATL 702
            M G+ HGACDYLIKP+R E LKNIWQHVVR++    K+L  S ++E+       ++     S  + E   K   ++K  +   D  D+   L       KK RVVWS+ELHQQFV AVN+LGI+                                       +AVPK+ILELMNVPGL+RENVASHLQK+RLYL+RL G +           N  ++T    ++QAL ++GQL  Q+LA L
Sbjct:  100 MTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGID---------------------------------------KAVPKRILELMNVPGLSRENVASHLQKFRLYLKRLSGEASQS--------NDSESTKRYENIQALVSSGQLHPQTLAAL 294
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR12_ARATH (Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.235e-36
Identity = 95/206 (46.12%), Postives = 121/206 (58.74%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSAN--EGNWKSSXXXXXXXXXXXXXXXTSTL-KKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNS 609
            MKGVTHGACDYL+KPVRIE LKNIWQHVVR R ++ +     GS   GD++     +   +S  N  +GN K   +  +DEDE+ + +D S   KK RVVW+VELH++FVAAVNQLG E                                       +A+PKKIL+LMNV  LTRENVASHLQK+RLYL+R+ GV+   + + NS
Sbjct:  105 MKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNR-----GSNNNGDKRDGSGNEGVGNSDQNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYE---------------------------------------KAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRISGVANQQAIMANS 266
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR18_ARATH (Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 1.721e-29
Identity = 87/235 (37.02%), Postives = 118/235 (50.21%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATF---GPLD-LQALAATGQLPAQSL 693
            MKG+ HGACDYL+KPV ++ L+NIW HVV+K    +  L       E D  P  S       + +     S +   D E    + D + T KKPRVVWS ELHQ+FV+AV QLG++                                       +AVPKKIL+LM++ GLTRENVASHLQKYRLYL+++    Q   N+       +D+++     LD L+   A  Q+P+  L
Sbjct:  105 MKGIIHGACDYLVKPVGLKELQNIWHHVVKKNIKSYAKLLPP---SESDSVPSASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGDGSGTRKKPRVVWSQELHQKFVSAVQQLGLD---------------------------------------KAVPKKILDLMSIEGLTRENVASHLQKYRLYLKKIDEGQQQ--NMTPDAFGTRDSSYFQMAQLDGLRDFTAARQIPSSGL 295
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR11_ARATH (Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.114e-29
Identity = 79/193 (40.93%), Postives = 104/193 (53.89%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANE---GNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRL 570
            MKGV HGACDYL+KP+R++ LK IWQHV+RK+  E +D+E  G  E G     + ++A +     +   G  +     +    +++    +S+ KK RVVWS ELH +FV AVNQ+G +                                       +A PKKIL+LMNVP LTRENVASHLQKYRLYL RL
Sbjct:   99 MKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCG-YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDH--------------------------------------KAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRL 252
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.513e-27
Identity = 79/193 (40.93%), Postives = 101/193 (52.33%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDL---EQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRL 570
            MKGV HGACDYL+KPVRIE LKNIWQHVVRK K +         SG+ ++ +R  K+ E  +       GN               + DD +  KKPRV+W+ ELH +F+AAV+ LG+E                                        AVPKKIL+LMNV  LTRENVASHLQK+R+ L+++
Sbjct:  105 MKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNKSNVSNGSGNCDKANR--KRKEQYEEEEEEERGN---------------DNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVE---------------------------------------RAVPKKILDLMNVDKLTRENVASHLQKFRVALKKV 241
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSI (Two-component response regulator EHD1 OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.268e-21
Identity = 72/214 (33.64%), Postives = 107/214 (50.00%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-----QSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTST--LKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRR-LCGVSQHPSNLNNSFMN 618
            MK V +GA D+L+KPVRIE L NIWQH+ RK+  + K+    G++E+    P      ++  A   S+A E +    +    D+  N   + T    L K R+ W+ +LH+QF+AAVN LG                                         +AVPKKIL +M V  LTRE VASHLQKYR+ L++ +   S+H + L+++ ++
Sbjct:   99 MKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLG---------------------------------------EDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLSSTALD 273
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSJ (Two-component response regulator EHD1 OS=Oryza sativa subsp. japonica GN=EHD1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.309e-21
Identity = 72/214 (33.64%), Postives = 107/214 (50.00%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPK-----QSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTST--LKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRR-LCGVSQHPSNLNNSFMN 618
            MK V +GA D+L+KPVRIE L NIWQH+ RK+  + K+    G++E+    P      ++  A   S+A E +    +    D+  N   + T    L K R+ W+ +LH+QF+AAVN LG                                         +AVPKKIL +M V  LTRE VASHLQKYR+ L++ +   S+H + L+++ ++
Sbjct:   99 MKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLG---------------------------------------EDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLSSTALD 273
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Match: ARR20_ARATH (Putative two-component response regulator ARR20 OS=Arabidopsis thaliana GN=ARR20 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.420e-16
Identity = 63/197 (31.98%), Postives = 90/197 (45.69%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKR--KNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELM----NVPGLTRENVASHLQKYRLYLRRLC 573
            M+ + +GACD+L+KPV  E +  +W+HV RKR  K+      +SG+VE    +    E  +   S  EG+  +   +++           S  KKPR+ W+ ELH +F  AV ++G    SL                                   +A PK IL+ M    NV GLTR NVASHLQKYR   ++ C
Sbjct:  127 MESIKYGACDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGESGTVESDPDEYDDLEQDNLYESNEEGSKNTCDHKEEK----------SPTKKPRMQWTPELHHKFEVAVEKMG----SL----------------------------------EKAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQSSKKTC 275
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2T4M5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G259700 PE=4 SV=1)

HSP 1 Score: 1055.82 bits (2729), Expect = 0.000e+0
Identity = 539/590 (91.36%), Postives = 543/590 (92.03%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLLDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHV+NNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSP GQ MLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSM NFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSS+ SNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLLDNTVRVK ERVAD APANLYPDHFG+EDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV
Sbjct:  122 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVNNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPRGQSMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMFNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSRPSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLLDNTVRVKFERVADAAPANLYPDHFGQEDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 672
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B0MGP4_GOSAR (Two-component response regulator ARR1-like protein OS=Gossypium arboreum GN=F383_21162 PE=4 SV=1)

HSP 1 Score: 1047.34 bits (2707), Expect = 0.000e+0
Identity = 534/591 (90.36%), Postives = 544/591 (92.05%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSL-LDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPL+DQRNIFSFENPKLRFGEAQQ HV+NNKQ NLLHGIPTTMEPKQL+GLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFN+SQHSNSLQGNLDHTQS+LVQQGF +GQNRNSTVISKAMFSAGDSTGHVNAQN NQHLNSL +DNTVRVKSERVAD APANLYPDHFG+EDLMSALLKQQD+IAPAENNDFDFDGYSIDNIPV
Sbjct:  122 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSKRRKDDEDENDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIE---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPSNLNNSFMNPQDATFGPLDLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLVDQRNIFSFENPKLRFGEAQQ-HVNNNKQMNLLHGIPTTMEPKQLSGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNTSQHSNSLQGNLDHTQSVLVQQGFSTGQNRNSTVISKAMFSAGDSTGHVNAQNGNQHLNSLFVDNTVRVKSERVADAAPANLYPDHFGQEDLMSALLKQQDVIAPAENNDFDFDGYSIDNIPV 672
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A061EWK1_THECC (Sensor histidine kinase, putative isoform 1 OS=Theobroma cacao GN=TCM_021300 PE=4 SV=1)

HSP 1 Score: 909.827 bits (2350), Expect = 0.000e+0
Identity = 469/601 (78.04%), Postives = 508/601 (84.53%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSE+ADYSSSANEGNWKSSK+RKDD+DE +ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNLNNSFM+PQ+ATFGPL      DLQ LAATGQLPAQSLAT QAAGLGRSTAKSGI MPL+DQRNIFSFENPKLRFGE QQQH++NNKQ NLLHGIPTTMEPKQLA LHH+AQS+GN+NM V SHG Q SQNN LL+QMAQPQ RGQ+LNDST   APRL S +GQP+LSNG+A NVSTRNG+PENIR P YNPVSQTSS+LNFPMNHTSELPGNSFPL +TPGISSL  K AFQED+NS++KGS GFMPSYDIFNDLNQHKPQNWELQNVGM F++SQHSNSLQGNLD  QSILVQQGF    ++GQNR++ V+SKAMFSAGD T   NAQN N HLN+LL DNT+R+KSERVAD  PANL+PDHFG+EDLMSALLKQQD IAPAE N+FDFDGYS+DNIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEEADYSSSANEGNWKSSKKRKDDDDEAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLNNSFMSPQEATFGPLSPLNGLDLQTLAATGQLPAQSLATFQAAGLGRSTAKSGIAMPLVDQRNIFSFENPKLRFGEGQQQHMNNNKQLNLLHGIPTTMEPKQLASLHHSAQSIGNINMQVTSHGVQGSQNNSLLIQMAQPQPRGQILNDSTGSHAPRLPSTLGQPILSNGIAANVSTRNGIPENIRGPGYNPVSQTSSLLNFPMNHTSELPGNSFPLGTTPGISSLTSKGAFQEDINSDVKGSGGFMPSYDIFNDLNQHKPQNWELQNVGMTFDASQHSNSLQGNLDLAQSILVQQGFSSGQMNGQNRSAAVVSKAMFSAGDCTEQGNAQNVNHHLNNLLVDNTIRIKSERVADAGPANLFPDHFGQEDLMSALLKQQDGIAPAE-NEFDFDGYSMDNIPV 681
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A061ENM9_THECC (Sensor histidine kinase, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_021300 PE=4 SV=1)

HSP 1 Score: 870.537 bits (2248), Expect = 0.000e+0
Identity = 449/577 (77.82%), Postives = 486/577 (84.23%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQ 1698
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKD EQSGSVEEGDRQPKQSE+ADYSSSANEGNWKSSK+RKDD+DE +ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNLNNSFM+PQ+ATFGPL      DLQ LAATGQLPAQSLAT QAAGLGRSTAKSGI MPL+DQRNIFSFENPKLRFGE QQQH++NNKQ NLLHGIPTTMEPKQLA LHH+AQS+GN+NM V SHG Q SQNN LL+QMAQPQ RGQ+LNDST   APRL S +GQP+LSNG+A NVSTRNG+PENIR P YNPVSQTSS+LNFPMNHTSELPGNSFPL +TPGISSL  K AFQED+NS++KGS GFMPSYDIFNDLNQHKPQNWELQNVGM F++SQHSNSLQGNLD  QSILVQQGF    ++GQNR++ V+SKAMFSAGD T   NAQN N HLN+LL DNT+R+KSERVAD  PANL+PDHFG+EDLMSALLKQ
Sbjct:   34 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEEADYSSSANEGNWKSSKKRKDDDDEAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLNNSFMSPQEATFGPLSPLNGLDLQTLAATGQLPAQSLATFQAAGLGRSTAKSGIAMPLVDQRNIFSFENPKLRFGEGQQQHMNNNKQLNLLHGIPTTMEPKQLASLHHSAQSIGNINMQVTSHGVQGSQNNSLLIQMAQPQPRGQILNDSTGSHAPRLPSTLGQPILSNGIAANVSTRNGIPENIRGPGYNPVSQTSSLLNFPMNHTSELPGNSFPLGTTPGISSLTSKGAFQEDINSDVKGSGGFMPSYDIFNDLNQHKPQNWELQNVGMTFDASQHSNSLQGNLDLAQSILVQQGFSSGQMNGQNRSAAVVSKAMFSAGDCTEQGNAQNVNHHLNNLLVDNTIRIKSERVADAGPANLFPDHFGQEDLMSALLKQ 571
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B0M7N9_GOSAR (Two-component response regulator ARR1-like protein OS=Gossypium arboreum GN=F383_10199 PE=4 SV=1)

HSP 1 Score: 802.357 bits (2071), Expect = 0.000e+0
Identity = 431/602 (71.59%), Postives = 474/602 (78.74%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNN-KQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSL-LDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSED DYSSS NEGNWKSSK+RKDDEDE D+RDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVS H  NLNNSFMNPQD TFGPL      DLQ L ATGQLPAQ LATLQAA LGRSTAKS IPMPL++QRNIFSFENPKLRFGE QQQHV+NN KQ NLLHGIPT ME KQL  L HT+QS+GN+NM V  HG+QSSQNN  L++M QP +R Q+LNDSTV L+      +GQP++ NG+A NVSTRNG+PENIRAP YN VSQTSS+LNFPMNH SELP ++F L STPG+S    K AF ED NSEIKGS GF+PSYD+FND  Q+K QNWELQN GM+ + SQHSNSLQGNLD TQS+LVQQGF    ++GQNR+  ++SKAMFSAGDST   N  N N HLN++  DNTVRVKSE VAD  P+NL+ DHFG+EDLM ALLKQQ  IAP E N+FDFDGYS+DNIPV
Sbjct:  124 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDTDYSSSVNEGNWKSSKKRKDDEDETDDRDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSPHSCNLNNSFMNPQDETFGPLSSVHGFDLQTLTATGQLPAQCLATLQAAVLGRSTAKSSIPMPLVNQRNIFSFENPKLRFGEGQQQHVNNNNKQVNLLHGIPTAMESKQLTSLRHTSQSIGNLNMQVAPHGAQSSQNNSSLIEMGQPLSRVQILNDSTVPLS------VGQPIVPNGIAANVSTRNGIPENIRAPGYNLVSQTSSILNFPMNHASELPVDTFSLRSTPGMSDHTSKGAFHEDFNSEIKGSGGFLPSYDVFNDY-QYKSQNWELQNAGMILDDSQHSNSLQGNLDLTQSVLVQQGFPSGQINGQNRSVPIVSKAMFSAGDSTEPGNLLNVNHHLNTIRADNTVRVKSESVADGNPSNLFTDHFGQEDLMIALLKQQQGIAPVE-NEFDFDGYSLDNIPV 678
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0B0MT30_GOSAR (Two-component response regulator ARR1-like protein OS=Gossypium arboreum GN=F383_24767 PE=4 SV=1)

HSP 1 Score: 798.119 bits (2060), Expect = 0.000e+0
Identity = 435/603 (72.14%), Postives = 485/603 (80.43%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLL--MQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SK+RKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L        Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTMEPKQL  L H AQS+GNMNM V  HG+Q+SQNNPLL  M   Q Q+RGQ+L DST+  APRL S MGQP+LSNG+ATNVS+RNG+PENIRAP Y   SQT SMLNFP+NH SELPGNSF L STPG+S L  K AFQEDVNSEIKGS G MPSYD+FNDLNQHKPQ+WELQNVGM F++SQHSNSLQGNLD TQS L QQGF SGQ    NR++ V +KAMFS GD     +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKKRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEPKQLVSLRHAAQSIGNMNMQVPPHGAQNSQNNPLLMQMGQQQQQSRGQILVDSTINHAPRLSSSMGQPILSNGIATNVSSRNGIPENIRAPGY---SQTPSMLNFPVNHASELPGNSFALGSTPGVSILTSKGAFQEDVNSEIKGSGGLMPSYDVFNDLNQHKPQSWELQNVGMAFDTSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVANKAMFSTGDVKELGSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 679
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2UVE1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G196400 PE=4 SV=1)

HSP 1 Score: 793.112 bits (2047), Expect = 0.000e+0
Identity = 438/605 (72.40%), Postives = 484/605 (80.00%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQ----MLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SKRRKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L        Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTME KQL  L H AQS+GNMNM V   G QSSQNNPLLMQM Q Q + Q    +L DST+  APRL S MGQP+LSNGMATNVS+RNG+PENIRAP Y   SQT SMLNFPMNH SELPGN FPL STPG+S+L  K AFQEDVNSEIKGS GFMPSYD+FNDLNQHKPQ+WELQNVG+ F+SSQHSNSLQGNLD TQS L QQGF SGQ    NR++ V SKA+FS GD     +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKRRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEAKQLVSLRHAAQSVGNMNMQVPPPGPQSSQNNPLLMQMGQQQQQQQSRGQILVDSTINHAPRL-SSMGQPILSNGMATNVSSRNGIPENIRAPGY---SQTPSMLNFPMNHASELPGNCFPLGSTPGVSNLTSKGAFQEDVNSEIKGSGGFMPSYDVFNDLNQHKPQSWELQNVGIAFDSSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVASKAVFSTGDVKELRSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 680
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2NHH8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G029200 PE=4 SV=1)

HSP 1 Score: 791.956 bits (2044), Expect = 0.000e+0
Identity = 427/602 (70.93%), Postives = 472/602 (78.41%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPL------DLQALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNN-KQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQMLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGF----LSGQNRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSL-LDNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSS NEGNWKSSK+RKDDEDE ++RDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVS H  N NNSFMNPQD TFGPL      DLQ L ATGQLPAQ LATLQAA LGRSTAKS IPMPL++QRNIFSFENPKLRFGE QQQHV+NN KQ NLLHGIPTTME KQL  L  T+QS+GN++M V  HG+QSSQNN  L++M QP +R Q+LNDSTV L+      +GQP++ NG+A NVSTRNG+PENIRAP YN VSQTSS+LNFPMNH SELP +SF L STPG+S    K AF ED NSEIKGS GF+P+YD+FND  Q+K QNWELQN GM+   SQHSNSLQGNLD  QS+LVQQGF    ++GQNR+  ++SKAMFSAGDST   N  N N HLN++  +NTVRVKS  VAD  P+NL+ DHFG+EDLM ALLKQQ  IAPAE N+FDFDGYS+DNIPV
Sbjct:  124 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSVNEGNWKSSKKRKDDEDETEDRDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSPHSCNPNNSFMNPQDETFGPLSSVHGLDLQTLTATGQLPAQCLATLQAAVLGRSTAKSSIPMPLVNQRNIFSFENPKLRFGEGQQQHVNNNNKQVNLLHGIPTTMESKQLTSLRRTSQSIGNVSMQVAPHGAQSSQNNSSLIEMGQPLSRVQILNDSTVPLS------VGQPIVPNGIAANVSTRNGIPENIRAPGYNLVSQTSSILNFPMNHASELPVDSFSLRSTPGMSDHTSKGAFHEDFNSEIKGSGGFLPTYDVFNDY-QYKSQNWELQNAGMILEDSQHSNSLQGNLDLAQSVLVQQGFPSGQINGQNRSVPIVSKAMFSAGDSTEPGNLLNVNHHLNTIRAENTVRVKSGSVADGNPSNLFADHFGQEDLMIALLKQQQGIAPAE-NEFDFDGYSLDNIPV 678
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2RQ03_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G196400 PE=4 SV=1)

HSP 1 Score: 791.571 bits (2043), Expect = 0.000e+0
Identity = 438/605 (72.40%), Postives = 484/605 (80.00%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQ----MLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SKRRKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI+                                       +AVPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L        Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTME KQL  L H AQS+GNMNM V   G QSSQNNPLLMQM Q Q + Q    +L DST+  APRL S MGQP+LSNGMATNVS+RNG+PENIRAP Y   SQT SMLNFPMNH SELPGN FPL STPG+S+L  K AFQEDVNSEIKGS GFMPSYD+FNDLNQHKPQ+WELQNVG+ F+SSQHSNSLQGNLD TQS L QQGF SGQ    NR++ V SKA+FS GD     +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV
Sbjct:   34 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKRRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGID---------------------------------------KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEAKQLVSLRHAAQSVGNMNMQVPPPGPQSSQNNPLLMQMGQQQQQQQSRGQILVDSTINHAPRL-SSMGQPILSNGMATNVSSRNGIPENIRAPGY---SQTPSMLNFPMNHASELPGNCFPLGSTPGVSNLTSKGAFQEDVNSEIKGSGGFMPSYDVFNDLNQHKPQSWELQNVGIAFDSSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVASKAVFSTGDVKELRSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 593
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Match: A0A0D2TAL1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G196400 PE=4 SV=1)

HSP 1 Score: 791.571 bits (2043), Expect = 0.000e+0
Identity = 437/605 (72.23%), Postives = 483/605 (79.83%), Query Frame = 1 
Query:    1 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWKSSXXXXXXXXXXXXXXXTSTLKKPRVVWSVELHQQFVAAVNQLGIESTSLYSIFFYNLLNVTXXXXXXXXXXXXXXXXXXXXXNTEAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLCGVSQHPSNLNNSFMNPQDATFGPLDL------QALAATGQLPAQSLATLQAAGLGRSTAKSGIPMPLIDQRNIFSFENPKLRFGEAQQQHVSNNKQTNLLHGIPTTMEPKQLAGLHHTAQSMGNMNMPVLSHGSQSSQNNPLLMQMAQPQARGQ----MLNDSTVGLAPRLLSPMGQPMLSNGMATNVSTRNGVPENIRAPSYNPVSQTSSMLNFPMNHTSELPGNSFPLVSTPGISSLAPKVAFQEDVNSEIKGSVGFMPSYDIFNDLNQHKPQNWELQNVGMMFNSSQHSNSLQGNLDHTQSILVQQGFLSGQ----NRNSTVISKAMFSAGDSTGHVNAQNSNQHLNSLL-DNTVRVKSERVADTAPANLYPDHFGREDLMSALLKQQDIIAPAENNDFDFDGYSIDNIPV 1770
            MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK+ EQSGSVEEGDRQPKQS+DADYSSSANEGNWK SKRRKD+E+E DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGI++                                        VPKKILELMNVPGLTRENVASHLQKYRLYLRRL GVSQH SNL+ + ++ QD TFG L        Q LAATGQLPAQSLA LQAAGLGR+TAKSGIP+ L+DQRNIFSFENPKLRFGE QQQH++N +Q NLLHGIPTTME KQL  L H AQS+GNMNM V   G QSSQNNPLLMQM Q Q + Q    +L DST+  APRL S MGQP+LSNGMATNVS+RNG+PENIRAP Y   SQT SMLNFPMNH SELPGN FPL STPG+S+L  K AFQEDVNSEIKGS GFMPSYD+FNDLNQHKPQ+WELQNVG+ F+SSQHSNSLQGNLD TQS L QQGF SGQ    NR++ V SKA+FS GD     +AQN NQHLN+LL DNT+RVKSERV DT+PAN++PDHFG++DLMSALLKQQ+ +A +E N+FDFDGYS++NIPV
Sbjct:  121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKEFEQSGSVEEGDRQPKQSDDADYSSSANEGNWKGSKRRKDEEEETDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDT----------------------------------------VPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLS-TIISAQDPTFGSLSSLSGLDLQTLAATGQLPAQSLARLQAAGLGRATAKSGIPITLVDQRNIFSFENPKLRFGEGQQQHMTNKQQVNLLHGIPTTMEAKQLVSLRHAAQSVGNMNMQVPPPGPQSSQNNPLLMQMGQQQQQQQSRGQILVDSTINHAPRL-SSMGQPILSNGMATNVSSRNGIPENIRAPGY---SQTPSMLNFPMNHASELPGNCFPLGSTPGVSNLTSKGAFQEDVNSEIKGSGGFMPSYDVFNDLNQHKPQSWELQNVGIAFDSSQHSNSLQGNLDLTQSALGQQGFSSGQMNGHNRSAAVASKAVFSTGDVKELRSAQNVNQHLNNLLVDNTIRVKSERVCDTSPANIFPDHFGQDDLMSALLKQQESVASSE-NEFDFDGYSMNNIPV 679
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 21
Match NameE-valueIdentityDescription
ARR2_ARATH2.652e-13045.07Two-component response regulator ARR2 OS=Arabidops... [more]
ARR1_ARATH6.409e-12946.72Two-component response regulator ARR1 OS=Arabidops... [more]
ARR14_ARATH3.018e-3740.50Two-component response regulator ARR14 OS=Arabidop... [more]
ARR12_ARATH7.235e-3646.12Two-component response regulator ARR12 OS=Arabidop... [more]
ARR18_ARATH1.721e-2937.02Two-component response regulator ARR18 OS=Arabidop... [more]
ARR11_ARATH3.114e-2940.93Two-component response regulator ARR11 OS=Arabidop... [more]
ARR10_ARATH1.513e-2740.93Two-component response regulator ARR10 OS=Arabidop... [more]
EHD1_ORYSI2.268e-2133.64Two-component response regulator EHD1 OS=Oryza sat... [more]
EHD1_ORYSJ2.309e-2133.64Two-component response regulator EHD1 OS=Oryza sat... [more]
ARR20_ARATH3.420e-1631.98Putative two-component response regulator ARR20 OS... [more]

Pages

back to top
BLAST of g.barbadense_cottongen_reftransV1_0094779 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2T4M5_GOSRA0.000e+091.36Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0MGP4_GOSAR0.000e+090.36Two-component response regulator ARR1-like protein... [more]
A0A061EWK1_THECC0.000e+078.04Sensor histidine kinase, putative isoform 1 OS=The... [more]
A0A061ENM9_THECC0.000e+077.82Sensor histidine kinase, putative isoform 2 (Fragm... [more]
A0A0B0M7N9_GOSAR0.000e+071.59Two-component response regulator ARR1-like protein... [more]
A0A0B0MT30_GOSAR0.000e+072.14Two-component response regulator ARR1-like protein... [more]
A0A0D2UVE1_GOSRA0.000e+072.40Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2NHH8_GOSRA0.000e+070.93Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2RQ03_GOSRA0.000e+072.40Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2TAL1_GOSRA0.000e+072.23Uncharacterized protein OS=Gossypium raimondii GN=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 2..23
e-value: 1.5E-7
score: 29.6
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 1..27
e-value: 4.9E-11
score: 42.1
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 1..27
NoneNo IPR availablePANTHERPTHR26402RESPONSE REGULATOR OF TWO-COMPONENT SYSTEMcoord: 1..143
NoneNo IPR availablePANTHERPTHR26402:SF617TWO-COMPONENT RESPONSE REGULATOR ARR1-RELATEDcoord: 1..143

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094779 ID=g.barbadense_cottongen_reftransV1_0094779; Name=g.barbadense_cottongen_reftransV1_0094779; organism=Gossypium barbadense; type=contig; length=2440bp
ATGAAGGGCGTTACCCACGGTGCTTGCGATTACCTAATCAAACCAGTTCG
AATTGAGGCACTGAAGAACATATGGCAACATGTGGTTCGGAAGAGGAAGA
ATGAGTGGAAAGACTTGGAGCAGTCGGGAAGTGTAGAAGAAGGAGATCGG
CAGCCAAAACAATCTGAAGATGCAGATTACTCATCCTCAGCTAATGAAGG
GAATTGGAAAAGCTCAAAACGGAGGAAGGACGATGAAGATGAAAATGATG
AGAGGGATGATACATCAACGCTAAAGAAGCCGAGGGTTGTTTGGTCTGTT
GAACTCCATCAACAGTTTGTTGCAGCAGTTAATCAACTAGGCATCGAAAG
TACGAGTCTTTACTCCATTTTCTTTTACAATTTACTGAATGTTACATCTT
CAATAATCGATTGACTATTGTTGTCTTCCCTTTCGTATGATTTTTCTGGT
TGATCTTCTAATACAGAGGCTGTCCCGAAGAAAATTTTGGAGTTGATGAA
CGTTCCCGGACTTACTAGAGAAAATGTTGCCAGCCACCTTCAGAAATATC
GCTTGTATCTTAGAAGGTTGTGTGGGGTATCGCAACACCCGAGTAATCTG
AATAATTCTTTTATGAATCCCCAAGATGCAACTTTTGGGCCACTTGATCT
TCAAGCTCTTGCTGCCACTGGTCAACTTCCCGCACAAAGTCTTGCCACAC
TCCAAGCAGCAGGGCTTGGTCGGTCAACTGCTAAATCAGGCATACCTATG
CCCCTCATTGATCAAAGAAACATTTTTAGCTTCGAAAACCCAAAGTTAAG
ATTTGGAGAAGCGCAGCAACAACATGTGAGCAATAATAAGCAAACGAATT
TACTTCATGGAATTCCAACAACTATGGAGCCAAAACAGCTTGCCGGCTTG
CACCACACGGCGCAATCAATGGGAAACATGAATATGCCAGTCCTTTCCCA
CGGTTCACAAAGTAGCCAAAATAATCCGTTATTGATGCAGATGGCTCAGC
CACAGGCTAGAGGACAAATGCTCAATGATTCCACTGTCGGTCTTGCTCCG
AGACTTCTTTCACCAATGGGGCAGCCCATGTTATCCAATGGAATGGCTAC
AAATGTCTCTACAAGAAATGGGGTTCCGGAAAATATCCGAGCCCCTAGTT
ATAATCCAGTTTCTCAGACCTCTTCAATGTTGAACTTCCCCATGAATCAC
ACTTCAGAACTACCTGGTAACAGTTTCCCTCTTGTAAGTACTCCGGGGAT
TTCTAGTCTAGCACCCAAAGTGGCTTTTCAGGAAGACGTTAACTCAGAAA
TCAAAGGATCAGTGGGTTTTATGCCAAGTTACGATATATTTAATGACTTG
AATCAGCATAAACCCCAAAACTGGGAACTACAGAACGTAGGCATGATGTT
CAATTCCTCTCAGCATTCGAACTCTCTTCAAGGTAACCTTGATCACACAC
AATCGATTTTAGTTCAACAAGGATTCTTGTCCGGACAGAACAGGAATTCA
ACCGTCATAAGTAAGGCAATGTTCTCAGCCGGAGATAGTACTGGCCATGT
GAACGCTCAAAACAGTAATCAACATCTCAACTCCCTTCTTGACAATACAG
TAAGGGTCAAATCCGAGAGAGTTGCTGATACGGCCCCTGCCAATCTATAC
CCTGATCACTTCGGACGAGAGGATCTCATGAGTGCTCTTTTGAAACAGCA
AGACATCATCGCACCGGCTGAAAACAACGATTTCGATTTCGATGGATATT
CCATCGATAATATTCCAGTTTAACAGGACCGGCTAAACAGGTATCTGTTA
CCATTTGGACCGACAATTACAATGCTTGTAAGATATTTCTGCATGATAAT
GCAAAGGCGATCGTGCAAATTTTTGATTGTTTTTTCGGTAACGAAATCGG
GCAGGCCAAAAAACACTAATTTTTAGGGTCTTTTTTCAAGTTGGTGAAGC
ATATTGTTTTTCTAGTCATCAGCAAGATCATAGGAGACTTATTTTCTAAC
TCTAAATAACAGATGAAATTTGATCTTCTATTTTGGTTTTGTTTTTATTG
TTATTCTGTTTTTGTGGAGGAATTGACTGTTATGTATATACACCATTTGA
TTGCTCTACATATAAGCCTGTCTGGGTATTCATTTATAGCTATTTTATTT
ATCAAATTTATCATGAGATCCTCCTATATGTGTTAGGTCTAATTATGATT
TTAGTCCCCATATTATGTTGAAATTTGGAATTTTATCTCTTTATAATTTG
TTTTTTATTAATAAGTTGAAATTGTAGTTGTAAAAATGATAGCGGGTTAG
ATATCTGTATTTAACAGTGCTTCACGCTTGGATGGACCACTTGAATATTT
GAATGTGATTTATTTTTATGGATAATAGGTTCGATATTCATTTAGAAATT
TTAATTCTTTTCGGTCCCTGGAAATTAGGTCTACTTTGGT
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding