g.barbadense_cottongen_reftransV1_0094656, g.barbadense_cottongen_reftransV1_0094656 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094656
Unique Nameg.barbadense_cottongen_reftransV1_0094656
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1998
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At10chromosomeg.barbadense_cottongen_reftransV1_0094656:1..1998 .
At10:56182100..56184321 -
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A0D2UTW9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G158100 PE=4 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 0.000e+0
Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = -3
Query:  314 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYKEFTQ 931
            +FVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRL+IGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYKEFTQ
Sbjct:  562 KFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLVIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYKEFTQ 767          

HSP 2 Score: 403.675 bits (1036), Expect = 0.000e+0
Identity = 246/299 (82.27%), Postives = 247/299 (82.61%), Query Frame = -2
Query: 1005 YNLKQRYVPPNYAXXXXXXXXXXXXXXXXLGHGFHRXXXXXXXKERHTVALQVMNELVKTACPYKFSERET-DIHFDPRITGEAQGEEAETDKRKGTCLQQHQHANLGQKSLSAGTQHNEGWI*CS*VYWLFVHAY*CCKPITGCSIKEGTVTVAPMESFLKEYRIIGXXXXXXXXXXXKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1898
            YNLKQRYVPPNYASIILSLKFFLNLLLIVLGHGFHRIKKIIIKKERHTVALQVMNELVKTA PYKFSERET DIHFDPRITGEAQG EAETDK+                                                TGCS KEGTVTVAPMESFLKEYRIIGSVDSKSSKYSVKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK
Sbjct:  312 YNLKQRYVPPNYASIILSLKFFLNLLLIVLGHGFHRIKKIIIKKERHTVALQVMNELVKTASPYKFSERETTDIHFDPRITGEAQGVEAETDKK------------------------------------------------TGCSNKEGTVTVAPMESFLKEYRIIGSVDSKSSKYSVKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 562          
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A0D2VMU8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G158100 PE=4 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 0.000e+0
Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = -3
Query:  314 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYKEFTQ 931
            +FVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRL+IGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYKEFTQ
Sbjct:  563 KFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLVIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYKEFTQ 768          

HSP 2 Score: 403.675 bits (1036), Expect = 0.000e+0
Identity = 246/299 (82.27%), Postives = 247/299 (82.61%), Query Frame = -2
Query: 1005 YNLKQRYVPPNYAXXXXXXXXXXXXXXXXLGHGFHRXXXXXXXKERHTVALQVMNELVKTACPYKFSERET-DIHFDPRITGEAQGEEAETDKRKGTCLQQHQHANLGQKSLSAGTQHNEGWI*CS*VYWLFVHAY*CCKPITGCSIKEGTVTVAPMESFLKEYRIIGXXXXXXXXXXXKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1898
            YNLKQRYVPPNYASIILSLKFFLNLLLIVLGHGFHRIKKIIIKKERHTVALQVMNELVKTA PYKFSERET DIHFDPRITGEAQG EAETDK+                                                TGCS KEGTVTVAPMESFLKEYRIIGSVDSKSSKYSVKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK
Sbjct:  313 YNLKQRYVPPNYASIILSLKFFLNLLLIVLGHGFHRIKKIIIKKERHTVALQVMNELVKTASPYKFSERETTDIHFDPRITGEAQGVEAETDKK------------------------------------------------TGCSNKEGTVTVAPMESFLKEYRIIGSVDSKSSKYSVKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 563          
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A061EJU7_THECC (Ankyrin repeat-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_020329 PE=4 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 1.776e-143
Identity = 160/203 (78.82%), Postives = 177/203 (87.19%), Query Frame = -3
Query:  323 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYKE 931
            +FVK+S++KHL  HY  N K+QTPKQIFTETHK LVKDGS WLTKTSESCSL+AALIATVAFAT+A IPGGV  + G PVL DEPAF VF I+SL+ALCFSVTALVFFLAILTSRFEEKDFA KLP +LI GLT+LFTSI A+LVSFCAGHFFEL+D LKFAA PIY  TCLP+SFFALAQLPLYFDLL AI + +PQRSYKE
Sbjct:  618 KFVKKSLAKHLLGHY--NNKDQTPKQIFTETHKTLVKDGSEWLTKTSESCSLIAALIATVAFATAANIPGGV--SHGKPVLRDEPAFDVFAISSLVALCFSVTALVFFLAILTSRFEEKDFANKLPRKLIWGLTSLFTSIAAMLVSFCAGHFFELRDELKFAAFPIYTATCLPISFFALAQLPLYFDLLWAICQKVPQRSYKE 816          

HSP 2 Score: 218.009 bits (554), Expect = 1.776e-143
Identity = 148/300 (49.33%), Postives = 182/300 (60.67%), Query Frame = -2
Query: 1005 KQRYVPPNYAXXXXXXXXXXXXXXXXLGHGFHRXXXXXXXKERHTVALQVMNELVKTACPYKFSERETDIHFDPRITGEAQGEEAETDKRKGTCLQQHQHANLGQ--KSLSAGTQ---HNEGWI*CS*VYWLFVHAY*CCKPITGCSIKEGTVTVAPMESFLKEYRIIGXXXXXXXXXXXKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1889
            +  YVP NY + I   KF    +++VLG GF RIKKI  KK+RHT A QVM++L++ A  YK+S  +T    D        G   E           HQ  N G   KS + G Q   HNE                      TG S  EG    AP+E +L EY I G+VDSK SK++V++  E    ++  + +TP L AA  GITEMVE ILDKFPV+IQD+D + KNV+LLAVENRQTHTFQFL+ R+  LHES+FR+ D+QGNNALHLAA YG YRPWLIPGSALQMQW +KWYK
Sbjct:  352 RTDYVPENYTTFIQFFKFVTKFVMVVLGLGFQRIKKITTKKQRHTWASQVMDKLIENASTYKYSGGQTGTSID--------GTTEEFPPNPSLTSASHQDTNTGNGSKSETLGKQGECHNE----------------------TGSSKMEGND--APVEKYLGEYHITGTVDSKISKHTVQIKLETKAAVESTKQKTPILTAASKGITEMVEKILDKFPVAIQDVDTENKNVMLLAVENRQTHTFQFLVERKG-LHESVFRQRDNQGNNALHLAATYGNYRPWLIPGSALQMQWAIKWYK 618          
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A061EKB6_THECC (Ankyrin repeat-containing protein, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_020329 PE=4 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 4.294e-143
Identity = 160/203 (78.82%), Postives = 177/203 (87.19%), Query Frame = -3
Query:  323 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYKE 931
            +FVK+S++KHL  HY  N K+QTPKQIFTETHK LVKDGS WLTKTSESCSL+AALIATVAFAT+A IPGGV  + G PVL DEPAF VF I+SL+ALCFSVTALVFFLAILTSRFEEKDFA KLP +LI GLT+LFTSI A+LVSFCAGHFFEL+D LKFAA PIY  TCLP+SFFALAQLPLYFDLL AI + +PQRSYKE
Sbjct:  470 KFVKKSLAKHLLGHY--NNKDQTPKQIFTETHKTLVKDGSEWLTKTSESCSLIAALIATVAFATAANIPGGV--SHGKPVLRDEPAFDVFAISSLVALCFSVTALVFFLAILTSRFEEKDFANKLPRKLIWGLTSLFTSIAAMLVSFCAGHFFELRDELKFAAFPIYTATCLPISFFALAQLPLYFDLLWAICQKVPQRSYKE 668          

HSP 2 Score: 218.394 bits (555), Expect = 4.294e-143
Identity = 146/298 (48.99%), Postives = 183/298 (61.41%), Query Frame = -2
Query: 1005 KQRYVPPNYAXXXXXXXXXXXXXXXXLGHGFHRXXXXXXXKERHTVALQVMNELVKTACPYKFSERETDIHFDPRITGEAQGEEAETDKRKGTCLQQHQHANLGQKSLSAGTQ---HNEGWI*CS*VYWLFVHAY*CCKPITGCSIKEGTVTVAPMESFLKEYRIIGXXXXXXXXXXXKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1889
            +  YVP NY + I   KF    +++VLG GF RIKKI  KK+RHT A QVM++L++ A  YK+S  +T    D         EE   +    +   Q  +   G KS + G Q   HNE                      TG S  EG    AP+E +L EY I G+VDSK SK++V++  E    ++  + +TP L AA  GITEMVE ILDKFPV+IQD+D + KNV+LLAVENRQTHTFQFL+ R+  LHES+FR+ D+QGNNALHLAA YG YRPWLIPGSALQMQW +KWYK
Sbjct:  204 RTDYVPENYTTFIQFFKFVTKFVMVVLGLGFQRIKKITTKKQRHTWASQVMDKLIENASTYKYSGGQTGTSID------GTTEEFPPNPSLTSASHQDTNTGNGSKSETLGKQGECHNE----------------------TGSSKMEGND--APVEKYLGEYHITGTVDSKISKHTVQIKLETKAAVESTKQKTPILTAASKGITEMVEKILDKFPVAIQDVDTENKNVMLLAVENRQTHTFQFLVERKG-LHESVFRQRDNQGNNALHLAATYGNYRPWLIPGSALQMQWAIKWYK 470          
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: V4S1L9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006513mg PE=4 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 8.725e-119
Identity = 137/202 (67.82%), Postives = 168/202 (83.17%), Query Frame = -3
Query:  326 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931
            QFVK+S+ +H     ++N   +TPK++FTETHK LVK+G  WLTKTSESCS+VAALIATVAFATSAT+PGGV + SG P+ E+EP F++F I+SL+ALCFSVTALVFFL ILTSR++EKDFA  LP +L++GLT LFTSI AIL+SFC+GH F LKD ++ AA PIY  TCLP++FFALAQLPLYFDL+ AI K +PQRSYK
Sbjct:  501 QFVKKSMPRHF--FTRFNDNGKTPKEVFTETHKDLVKEGKEWLTKTSESCSVVAALIATVAFATSATVPGGVDQESGKPIFENEPVFNIFSISSLVALCFSVTALVFFLTILTSRYQEKDFAKDLPRKLLLGLTTLFTSIAAILISFCSGHSFMLKDEMRSAAYPIYAATCLPMTFFALAQLPLYFDLIWAIFKKVPQRSYK 700          

HSP 2 Score: 184.882 bits (468), Expect = 8.725e-119
Identity = 131/300 (43.67%), Postives = 171/300 (57.00%), Query Frame = -2
Query: 1005 PPNYAXXXXXXXXXXXXXXXXLGHGFHRXXXXXXXKERHTVALQVMNELVKTACPYKFSERETDIHFDPRITGEAQGEEA----ETDKRKGTCLQQHQ-----HANLGQKSLSAGTQHNEGWI*CS*VYWLFVHAY*CCKPITGCSIKEGTVTVAPM-ESFLKEYRIIGXXXXXXXXXXXKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1874
            PPNYA+ +L  K  +  +LIVLG G  RI  I  KKERHT A+QVM ELV+ A  YK+ +         R +G  + EEA    ET     T    HQ     H  +   S  +GT+  +  I                       +    + V  M + FLK Y  +    + S K  V + FEK    +    ETP LIAA+MG+TEMVE IL  FPV+I DLD+D KNV+LLA+ENRQT  ++ L+NR+  L ESIFR+ D QGN+ALHLAAK+G++RPWL+PG+ALQMQWE+KWY+
Sbjct:  230 PPNYATCVLLFKVMMKAMLIVLGLGIWRINHITEKKERHTWAIQVMCELVQHASLYKYEDNGPK----RRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIENGSAQSGTEKMDNKI-----------------------LLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKNAQQSGRKETPILIAARMGVTEMVEQILGTFPVAIHDLDSDRKNVVLLAIENRQTSIYKLLLNRKI-LGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQ 501          
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A067KWK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01125 PE=4 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.310e-116
Identity = 139/202 (68.81%), Postives = 169/202 (83.66%), Query Frame = -3
Query:  326 QFVKRSISKHLPIHYKYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931
             FVK+S+  H  +  K+N K QTPK+IFTETHK LV  GS WLTKTSESCS+VAALIATVAFATSAT+PGG+ + +G P L+DEPAF+VF IASL+ALCFSVTAL+FFL ILTSR++E DFA  LP +L +GLT+LFTSI ++L+SFCAGH F LK+ L++AA P+Y  TCLPV+FFALAQLPLYFDL  AI+K++PQRSYK
Sbjct:  608 NFVKKSMPPHFFV--KHNSKGQTPKEIFTETHKDLVTRGSEWLTKTSESCSVVAALIATVAFATSATVPGGLNQNNGQPTLKDEPAFNVFAIASLVALCFSVTALIFFLTILTSRYQENDFAVDLPRKLFLGLTSLFTSIASVLLSFCAGHVFVLKENLRYAAYPLYAATCLPVTFFALAQLPLYFDLASAILKEVPQRSYK 807          

HSP 2 Score: 157.532 bits (397), Expect = 2.310e-116
Identity = 119/306 (38.89%), Postives = 172/306 (56.21%), Query Frame = -2
Query: 1008 RYVPPNYAXXXXXXXXXXXXXXXXLGHGFHRXXXXXXXKERHTVALQVMNELVKTACP--YKFSERETDIHFDPRITGEAQGEEA----ETDKRKGTCLQQHQHANLGQKSLSAGTQ-HNEGWI*CS*VYWLFVHAY*CCKPITGCSIKEGTVTVAP-------MESFLKEYRIIGXXXXXXXXXXXKMAFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWY 1883
            R  PPN+A+     +F  N++LI+LG G  +IK I  KKERH  A+Q+M+ELV+ A    YK++ +     +  R    ++  +A    E D++  +    H     G  +L+A  + H +G                  +   G    +  V VA        +  F++ Y       +   K  V + +EK    K  + ETP L+AAKMGITE+V+ +L+ FPV+IQDLD+D KNV+LLAVE RQT  +  L+ R   L ES+FR+ D+ GN+ALHLAAK+G++RPWLIPG+ALQMQWE+KWY
Sbjct:  325 RIYPPNFATCFQFCQFMANMILIILGFGISKIKHIKEKKERHVWAVQIMHELVQRASSQGYKYNGQNPKTSWPNRDGDASEVSKALLSSEFDEKSESRDANHD----GLSTLTADQEEHQKG------------------RDEHGKEKNDKPVLVAANLGVTEMVNKFIEAYPYAIQELNTLQKNLVLLTYEKKKTPKFCQKETPILMAAKMGITEIVDKVLNTFPVAIQDLDSDKKNVVLLAVEQRQTDVYNLLLKRAM-LKESVFRQLDNDGNSALHLAAKFGDHRPWLIPGAALQMQWEIKWY 607          
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A022RLJ2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020415mg PE=4 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 7.004e-112
Identity = 135/204 (66.18%), Postives = 172/204 (84.31%), Query Frame = -3
Query:  326 QFVKRSISKHLPIHY--KYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931
            +FVK S    +P+H+  +YN+K QTP++IF+E+H+ L+K+G  WLT TSESCS+VAALIATVAFATSAT+PGGVK   GTP LE++PAFS+F IASLIALCFSVTA+V FLAILTSR++E+DF   LP +L++GLT+LF SI ++LVSFCAGHFF LK +L++AA P+Y VTCLPV+FFA+AQ PLYFDL+RA  + +PQRSYK
Sbjct:  435 EFVKNS----MPMHFFIRYNQKGQTPREIFSESHQKLLKEGGEWLTSTSESCSVVAALIATVAFATSATVPGGVKSDIGTPTLENQPAFSIFAIASLIALCFSVTAVVMFLAILTSRYQERDFGKDLPRKLLVGLTSLFVSIASMLVSFCAGHFFVLKKKLQYAAFPVYAVTCLPVTFFAVAQFPLYFDLVRATFRKVPQRSYK 634          

HSP 2 Score: 144.05 bits (362), Expect = 7.004e-112
Identity = 67/116 (57.76%), Postives = 91/116 (78.45%), Query Frame = -2
Query: 1005 EKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1352
            E+   ++ ++ ETP LIAA+ GITE+V  IL+ FPV+I D++ + KNV+LLAVENRQ H ++FL+ R+  + E+IFRK D  GN+ALHLAA  GE +PWLIPG+ALQMQWE+KWY+
Sbjct:  321 ERKTDVEMEKRETPILIAARNGITEIVAKILELFPVAIHDMNNERKNVVLLAVENRQPHVYEFLMKRKI-MKETIFRKMDKDGNSALHLAAMLGENKPWLIPGAALQMQWEIKWYE 435          
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A067FML6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004365mg PE=4 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 9.759e-112
Identity = 135/204 (66.18%), Postives = 169/204 (82.84%), Query Frame = -3
Query:  326 QFVKRSISKHLPIHY--KYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931
            +FVK S    +P H+  +YNK+N++PK +FTETHK LV+ G  WLT TSESCS+VAALIATVAFATSAT+PGGVKE SG P LE++PAF+VF I+SL+ALCFSVTA+V FLAILTSR++E DF   LP +L++GLT+LF SI ++LVSFCAGHFF L+++LK+AA P+Y VTCLPV+ FA+AQ PLYFDL+ A  K +PQRSYK
Sbjct:  556 EFVKES----MPFHFFVRYNKQNKSPKDVFTETHKELVQAGGQWLTNTSESCSVVAALIATVAFATSATVPGGVKEDSGEPTLENQPAFNVFAISSLVALCFSVTAVVMFLAILTSRYQEGDFRSDLPGKLLLGLTSLFVSIASMLVSFCAGHFFVLREKLKYAAFPVYAVTCLPVTLFAIAQFPLYFDLIWATFKKVPQRSYK 755          

HSP 2 Score: 147.902 bits (372), Expect = 9.759e-112
Identity = 66/105 (62.86%), Postives = 88/105 (83.81%), Query Frame = -2
Query: 1005 ETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1319
            ETP LIAAK GITE+VE IL+ FPV+I D++++ KN++LLAVENRQ H +Q L+ + T + +S+FRK D QGN+ALHLAA  G+++PWLIPG+ALQMQWEL+WY+
Sbjct:  453 ETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLL-KTTIMKDSVFRKVDDQGNSALHLAATLGDHKPWLIPGAALQMQWELRWYE 556          
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A0D2QTW1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077300 PE=4 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 8.692e-109
Identity = 133/204 (65.20%), Postives = 164/204 (80.39%), Query Frame = -3
Query:  326 QFVKRSISKHLPIHY--KYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931
            +FVK S    +P+H+  +YN +N+TPK IFT+THK LV  G  WLT TSESCS+VAALIATVAFATS T+PGGVK  SG P LE+ PAF VF I+SLIALCFSVTA+V FL+ILTSR++E+DF   LP +L++GLT+LF SI ++LVSFCAGHFF LKD+LK+AA P+Y VTCLPV+ FA+AQ PLY DL  A+ K +PQRSY+
Sbjct:  577 EFVKHS----MPVHFFARYNTENKTPKDIFTDTHKQLVDKGGEWLTNTSESCSVVAALIATVAFATSTTVPGGVKSESGKPTLENHPAFDVFAISSLIALCFSVTAVVMFLSILTSRYQERDFGIDLPRKLLLGLTSLFVSIASVLVSFCAGHFFILKDKLKYAAFPVYAVTCLPVTLFAIAQFPLYLDLAWALFKKVPQRSYE 776          

HSP 2 Score: 143.28 bits (360), Expect = 8.692e-109
Identity = 65/118 (55.08%), Postives = 91/118 (77.12%), Query Frame = -2
Query: 1005 AFEKNVILKQKETETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1358
            A EK    +  + ETP LIAAK GITEMV+ IL +FPV+I +++++ KN++LLAVENRQ H +Q L+ +   + +S+FR  D +GN+ALHLAA  G+++PWLIPG+ALQMQWE+KWY+
Sbjct:  461 AGEKKKTKEVAKRETPILIAAKSGITEMVDQILQRFPVAIHEMNSENKNIVLLAVENRQPHVYQLLLKKNI-MKDSVFRAVDEKGNSALHLAAMLGDHKPWLIPGAALQMQWEIKWYE 577          
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Match: A0A0D2P8I3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077300 PE=4 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 1.018e-108
Identity = 133/204 (65.20%), Postives = 164/204 (80.39%), Query Frame = -3
Query:  326 QFVKRSISKHLPIHY--KYNKKNQTPKQIFTETHKLLVKDGSAWLTKTSESCSLVAALIATVAFATSATIPGGVKETSGTPVLEDEPAFSVFCIASLIALCFSVTALVFFLAILTSRFEEKDFACKLPWRLIIGLTALFTSITAILVSFCAGHFFELKDRLKFAALPIYIVTCLPVSFFALAQLPLYFDLLRAIIKDIPQRSYK 931
            +FVK S    +P+H+  +YN +N+TPK IFT+THK LV  G  WLT TSESCS+VAALIATVAFATS T+PGGVK  SG P LE+ PAF VF I+SLIALCFSVTA+V FL+ILTSR++E+DF   LP +L++GLT+LF SI ++LVSFCAGHFF LKD+LK+AA P+Y VTCLPV+ FA+AQ PLY DL  A+ K +PQRSY+
Sbjct:  576 EFVKHS----MPVHFFARYNTENKTPKDIFTDTHKQLVDKGGEWLTNTSESCSVVAALIATVAFATSTTVPGGVKSESGKPTLENHPAFDVFAISSLIALCFSVTAVVMFLSILTSRYQERDFGIDLPRKLLLGLTSLFVSIASVLVSFCAGHFFILKDKLKYAAFPVYAVTCLPVTLFAIAQFPLYLDLAWALFKKVPQRSYE 775          

HSP 2 Score: 143.28 bits (360), Expect = 1.018e-108
Identity = 62/105 (59.05%), Postives = 86/105 (81.90%), Query Frame = -2
Query: 1005 ETPFLIAAKMGITEMVESILDKFPVSIQDLDADGKNVLLLAVENRQTHTFQFLINRETPLHESIFRKWDHQGNNALHLAAKYGEYRPWLIPGSALQMQWELKWYK 1319
            ETP LIAAK GITEMV+ IL +FPV+I +++++ KN++LLAVENRQ H +Q L+ +   + +S+FR  D +GN+ALHLAA  G+++PWLIPG+ALQMQWE+KWY+
Sbjct:  473 ETPILIAAKSGITEMVDQILQRFPVAIHEMNSENKNIVLLAVENRQPHVYQLLLKKNI-MKDSVFRAVDEKGNSALHLAAMLGDHKPWLIPGAALQMQWEIKWYE 576          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of g.barbadense_cottongen_reftransV1_0094656 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2UTW9_GOSRA0.000e+099.03Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2VMU8_GOSRA0.000e+099.03Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061EJU7_THECC1.776e-14378.82Ankyrin repeat-containing protein, putative isofor... [more]
A0A061EKB6_THECC4.294e-14378.82Ankyrin repeat-containing protein, putative isofor... [more]
V4S1L9_9ROSI8.725e-11967.82Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067KWK9_JATCU2.310e-11668.81Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A022RLJ2_ERYGU7.004e-11266.18Uncharacterized protein OS=Erythranthe guttata GN=... [more]
A0A067FML6_CITSI9.759e-11266.18Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A0D2QTW1_GOSRA8.692e-10965.20Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2P8I3_GOSRA1.018e-10865.20Uncharacterized protein OS=Gossypium raimondii GN=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026961PGG domainPFAMPF13962PGGcoord: 56..167
e-value: 3.5E-26
score: 91.1
NoneNo IPR availablePANTHERPTHR24177:SF30SUBFAMILY NOT NAMEDcoord: 16..217
NoneNo IPR availablePANTHERPTHR24177FAMILY NOT NAMEDcoord: 16..217
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 168..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 202..221
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..100
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..201
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..139
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.818
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
NoneNo IPR availableTMHMMTMhelixcoord: 142..164
NoneNo IPR availableTMHMMTMhelixcoord: 179..201

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094656 ID=g.barbadense_cottongen_reftransV1_0094656; Name=g.barbadense_cottongen_reftransV1_0094656; organism=Gossypium barbadense; type=contig; length=1998bp
GTAATGTGCCATGCAGTTTGCCAATTCCCCATGTTTGTGTGTCTGTGAAT
GTTGTCAGGTTCTAGAATTATTCGAGTTCTTTATTTTCTCTAAAATATAT
GTAAATGCTTCTATTAGATCCGGAGATCTGATATGAAAACATTTCTAAAT
ATATTAGGAAACTTCAAAAAGTTCGGTTTATTCGTATTGAATTCAATTTG
GTAACATTACAAGAAAGCAGTAGCATACATATCAAAATTTATTATACTAT
ATCTCTTAAGAAACACCCAATGAAGTTGATGATAAACATGAAAAATGCTA
AGCAATTTAGTTATTGAGTAAACTCCTTATAACTACGCTGTGGGATATCC
TTGATGATTGCCCGTAAAAGATCGAAGTAGAGGGGCAACTGTGCAAGTGC
AAAGAAGGAAACAGGCAAACATGTTACTATGTAAATAGGTAAAGCTGCAA
ACTTTAGCCTATCTTTAAGTTCGAAGAAATGGCCTGCACAAAATGAGACT
AGTATTGCAGTTATTGAAGTGAACAATGCTGTTAGGCCGATAATGAGTCT
CCAAGGCAATTTACAAGCAAAATCTTTCTCTTCAAATCGGGAAGTCAGGA
TTGCTAGGAAAAATACCAGGGCTGTCACGGAGAAGCAAAGGGCTATTAAG
GATGCAATGCAAAACACAGAGAATGCGGGCTCATCCTCAAGAACTGGTGT
GCCAGAGGTTTCCTTAACTCCACCTGGGATAGTTGCTGATGTTGCAAATG
CTACTGTGGCTATCAATGCTGCTACGAGTGAGCAAGATTCAGAGGTTTTC
GTGAGCCATGCGCTACCGTCTTTGACAAGCAATTTGTGTGTTTCCGTGAA
GATTTGCTTTGGGGTTTGATTCTTCTTGTTGTACTTGTAATGAATAGGCA
AATGCTTTGAAATGGATCGCTTGACAAACTGCAATACCGATGGAACTAAG
ATTAAAAAAAGGAAAGCAAAAGACAATTCAAAAATAGAGCTCTACGACAT
ATACCTTATACCACTTGAGCTCCCATTGCATTTGTAAAGCAGATCCTGGA
ATGAGCCAAGGACGATATTCTCCATATTTGGCAGCAAGGTGCAATGCATT
GTTCCCTTGATGATCCCACTTTCGGAAAATGCTTTCATGCAACGGGGTTT
CTCTGTTGATTAGGAACTGAAAAGTATGCGTTTGCCTATTCTCCACTGCT
AAAAGCAACACGTTTTTGCCATCAGCATCCAAGTCCTGAATAGAAACAGG
GAACTTGTCTAAAATACTTTCCACCATTTCTGTGATTCCCATCTTTGCTG
CTATCAAGAAAGGCGTCTCTGTCTCTTTTTGTTTAAGAATTACGTTCTTT
TCAAATGCCATTTTCACCGAATACTTTGAGCTCTTAGAATCCACCGACCC
TATTATCCTGTATTCTTTAAGAAAGCTCTCCATTGGTGCTACTGTGACTG
TCCCTTCCTTGATGGAGCAACCTGTTATGGGTTTACAACATCAATATGCA
TGGACAAAGAGCCAATACACTTAACTACATCAAATCCAACCCTCATTGTG
TTGGGTTCCAGCTGATAGGGATTTTTGGCCGAGGTTTGCATGTTGGTGTT
GTTGGAGACACGTACCTTTCCTCTTATCGGTCTCAGCCTCCTCACCTTGA
GCCTCCCCCGTAATGCGAGGGTCAAAATGAATGTCAGTCTCTCTTTCACT
AAATTTGTATGGACAAGCTGTCTTCACTAATTCATTCATGACTTGCAGTG
CAACTGTGTGTCTCTCTTTCTTTATTATGATTTTCTTTATTCTGTGAAAC
CCATGTCCCAAAACTATTAGCAGCAAATTCAGGAAAAACTTAAGAGATAG
GATAATCGAGGCATAATTGGGTGGAACATAGCGTTGCTTGAGATTGTATT
TTTCCTCTTCCTTGTCTTTTGATTCACCTTTATCTTCTAAAGATTACAAC
ATTAAAACAAAGGAAGCTTAAAGACAATTTTATGGTTATACACAAAGG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR026961PGG_dom