g.barbadense_cottongen_reftransV1_0094274, g.barbadense_cottongen_reftransV1_0094274 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0094274
Unique Name	g.barbadense_cottongen_reftransV1_0094274
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2888

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
At12	chromosome	g.barbadense_cottongen_reftransV1_0094274:1..2888 . At12:86551515..86556437 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RGAPX_ARATH (Uncharacterized Rho GTPase-activating protein At5g61530 OS=Arabidopsis thaliana GN=At5g61530 PE=1 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 7.537e-84
Identity = 135/170 (79.41%), Postives = 154/170 (90.59%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            + AKKTAQKSKTILTDIERWQKGVAS+DVFGV IE+TVQRQ++ +PIPLILV+CADYLIL+G+NS  LFKAEGD+K+I+QLVSAYNQD  ASIPEGVNP+DVAAL KYY+ASLP PLTTFELY+EIK ARSSIH MR  L+ L +VNY TLEFITALLLRVSQKS+LNK+
Sbjct:  108 EAAKKTAQKSKTILTDIERWQKGVASSDVFGVAIEITVQRQESSRPIPLILVKCADYLILTGLNSPNLFKAEGDRKLIQQLVSAYNQDPRASIPEGVNPVDVAALLKYYLASLPTPLTTFELYNEIKDARSSIHRMRQSLQKLSNVNYNTLEFITALLLRVSQKSLLNKM 277

HSP 2 Score: 160.614 bits (405), Expect = 5.371e-41
Identity = 75/98 (76.53%), Postives = 88/98 (89.80%), Query Frame = 3

Query:  324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617
            MPS ++QQWQE+ +GFFSSSG KL+EA QTAG+FVGEVAKDAK NV DVAERVGS+ K+RWA L+QPATRHAVQE LI+AAATTGTF+RKGIT TK++
Sbjct:    1 MPSLISQQWQERTSGFFSSSGTKLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSRWAILQQPATRHAVQEHLITAAATTGTFVRKGITETKEK 98

HSP 3 Score: 150.214 bits (378), Expect = 1.665e-37
Identity = 67/102 (65.69%), Postives = 78/102 (76.47%), Query Frame = 1

Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517
            MD+ SLAMEMAPVIMW++D +PESYR+YW  P +SP K +   T T   WD+L D+GE  DASS IPLDD   VDFGA+EV+QCLIE HN IFTDA ETVWR
Sbjct:  277 MDSHSLAMEMAPVIMWREDNRPESYREYWRRPSRSPKKSNDFETAT--PWDLLSDEGEGPDASSSIPLDDIARVDFGAVEVVQCLIEHHNAIFTDAAETVWR 376

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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: GACJJ_DICDI (Rho GTPase-activating protein gacJJ OS=Dictyostelium discoideum GN=gacJJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.148e-14
Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 1

Query: 1378 VFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSAR------SSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKVGV 1809
            VFGVPIE TV     I   P ++++  DY+    ++   +F+  G    IEQ  + Y++     + + V+P  VA L K Y+  LP+PL T+E YD   +A+      S I  +++++K LP VNY  L ++ A + +V+  S  NK+ V
Sbjct:  425 VFGVPIEKTVSGNNEI---PAVVLQTIDYIEKKAMDIVGIFRLSGSVLTIEQWKAKYDKGEKVDLFQEVDPHAVAGLLKLYLRELPDPLLTYEKYDNFIAAQSIDDFPSRIKLIKHLVKSLPPVNYAVLSYLMAFVGKVATHSAANKMQV 571

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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG35_RAT (Rho GTPase-activating protein 35 OS=Rattus norvegicus GN=Arhgap35 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.433e-14
Identity = 42/154 (27.27%), Postives = 81/154 (52.60%), Query Frame = 1

Query: 1357 KGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPID-VAALAKYYIASLPEPLTTFELY------DEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLN 1797
            K    ++ FGVP+   V  +   KPIP+ + RC +Y+  +G++++ +++  G+K  +E L   ++QD N  + E    ++ VA   K + + LP+PL  + +        +I      +HA++ VLK  P  N+   +++ + L RVS  + +N
Sbjct: 1239 KATWESNYFGVPLTTVVTPE---KPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYSMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNRVSHNNKVN 1389

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG35_HUMAN (Rho GTPase-activating protein 35 OS=Homo sapiens GN=ARHGAP35 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 2.035e-13
Identity = 41/154 (26.62%), Postives = 81/154 (52.60%), Query Frame = 1

Query: 1357 KGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPID-VAALAKYYIASLPEPLTTFELY------DEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLN 1797
            K    ++ FGVP+   V  +   KPIP+ + RC +Y+  +G++++ +++  G+K  +E L   ++QD N  + E    ++ VA   K + + LP+PL  + +        +I      +HA++ VLK  P  N+   +++ + L +VS  + +N
Sbjct: 1239 KATWESNYFGVPLTTVVTPE---KPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVN 1389

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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG35_MOUSE (Rho GTPase-activating protein 35 OS=Mus musculus GN=Arhgap35 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 2.105e-13
Identity = 41/154 (26.62%), Postives = 81/154 (52.60%), Query Frame = 1

Query: 1357 KGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPID-VAALAKYYIASLPEPLTTFELY------DEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLN 1797
            K    ++ FGVP+   V  +   KPIP+ + RC +Y+  +G++++ +++  G+K  +E L   ++QD N  + E    ++ VA   K + + LP+PL  + +        +I      +HA++ VLK  P  N+   +++ + L +VS  + +N
Sbjct: 1239 KATWESNYFGVPLTTVVTPE---KPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYSMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVN 1389

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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG35_CANFA (Rho GTPase-activating protein 35 OS=Canis familiaris GN=ARHGAP35 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.716e-13
Identity = 41/154 (26.62%), Postives = 81/154 (52.60%), Query Frame = 1

Query: 1357 KGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPID-VAALAKYYIASLPEPLTTFELY------DEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLN 1797
            K    ++ FGVP+   V  +   KPIP+ + RC +Y+  +G++++ +++  G+K  +E L   ++QD N  + E    ++ VA   K + + LP+PL  + +        +I      +HA++ VLK  P  N+   +++ + L +VS  + +N
Sbjct: 1240 KATWESNYFGVPLTTVVTPE---KPIPVFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVN 1390

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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG05_MOUSE (Rho GTPase-activating protein 5 OS=Mus musculus GN=Arhgap5 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.210e-12
Identity = 45/151 (29.80%), Postives = 81/151 (53.64%), Query Frame = 1

Query: 1372 TDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFN---ASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSA------RSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLN 1797
            ++ FG+P++  V    A KPIPL + +C +++  +G+ ++ L++  G+K   + +   ++QD N   AS+   VN   VA   K + A LP+PL  + L+ E+  A          HA++ ++K    VNY    ++   L RVSQ++ +N
Sbjct: 1256 SNYFGMPLQDLVT---AEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLASMEVTVNA--VAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERFHALKEIVKKFHPVNYDVFRYVITHLNRVSQQNKIN 1401

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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RG68F_DROME (Rho GTPase-activating protein 68F OS=Drosophila melanogaster GN=RhoGAP68F PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.901e-12
Identity = 52/162 (32.10%), Postives = 83/162 (51.23%), Query Frame = 1

Query: 1354 QKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSG-INSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEI-------KSARSSIHAMRNVLKM----LPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            Q  +A+T  FGVP++  V     +  IP I+ +C D L ++G I+++ +F+  G+   I  L    N+  +  + + VN   +A L K ++  L EPL TFELY+++       K  RS     RNV ++    LP  NY   ++I   L+RV     LNK+
Sbjct:  265 QHKMATTHQFGVPLKFIVMNSPCLNSIPPIVRKCVDSLSITGVIDTEGIFRRSGNHSEIMALKERVNRGEDVDL-KSVNVHVIAGLLKSFLRDLAEPLLTFELYEDVTGFLDWPKEERS-----RNVTQLIREKLPEENYELFKYIVEFLVRVMDCEDLNKM 420

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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG05_HUMAN (Rho GTPase-activating protein 5 OS=Homo sapiens GN=ARHGAP5 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.392e-11
Identity = 44/151 (29.14%), Postives = 80/151 (52.98%), Query Frame = 1

Query: 1372 TDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFN---ASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSA------RSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLN 1797
            ++ FG+P++  V    A KPIPL + +C +++  +G+ ++ L++  G+K   + +   ++QD N    S+   VN   VA   K + A LP+PL  + L+ E+  A         +HA++ ++K    VNY    ++   L RVSQ+  +N
Sbjct: 1257 SNYFGMPLQDLVT---AEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTVNA--VAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKIN 1402

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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Match: RHG25_MOUSE (Rho GTPase-activating protein 25 OS=Mus musculus GN=Arhgap25 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.044e-10
Identity = 46/177 (25.99%), Postives = 82/177 (46.33%), Query Frame = 1

Query: 1339 DIERWQK------GVASTDVFGVPIEVTVQRQQAIKP--IPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELY------------DEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKVGV 1809
            ++E W K      G  S  VFG  ++ TV  +Q   P  +P+++ +CA++++  G++ + +F+  G   +++QL  A++     S     +   VA+L K Y+  LPEP+  +  Y            DE K+ +  +      L  LP  NY  L +I   L  +     +NK+ V
Sbjct:  138 EMEEWVKFLRRVAGTPSGAVFGQRLDETVAYEQKFGPHLVPILVEKCAEFILEHGVSEEGIFRLPGQDNLVKQLRDAFDAGERPSFDRDTDVHTVASLLKLYLRDLPEPVVPWSQYEGFLLCGQLMNADEAKAQQELVKQ----LSTLPRDNYNLLSYICRFLHEIQLNCAVNKMSV 310

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BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A0D2TA56_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G215000 PE=4 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 6.487e-105
Identity = 167/170 (98.24%), Postives = 170/170 (100.00%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            +VAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILV+CADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNK+
Sbjct:  108 EVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVKCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKM 277

HSP 2 Score: 231.106 bits (588), Expect = 5.865e-64
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 1

Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517
            MDARSLA+EMAPVIMWQKDRKPESYRKYWSHP KSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR
Sbjct:  277 MDARSLALEMAPVIMWQKDRKPESYRKYWSHPLKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 378

HSP 3 Score: 197.978 bits (502), Expect = 3.626e-52
Identity = 96/98 (97.96%), Postives = 98/98 (100.00%), Query Frame = 3

Query:  324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617
            MPSAV+QQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVK+RWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR
Sbjct:    1 MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKSRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 98

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A0B0NPG4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_03900 PE=4 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.982e-104
Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            +VAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQD NASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNK+
Sbjct:  108 EVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDLNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKM 277

HSP 2 Score: 236.884 bits (603), Expect = 5.733e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1

Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517
            MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR
Sbjct:  277 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 378

HSP 3 Score: 200.675 bits (509), Expect = 4.428e-53
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 3

Query:  324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617
            MPSAV+QQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR
Sbjct:    1 MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 98

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A0D2U777_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G215000 PE=4 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 7.423e-97
Identity = 167/198 (84.34%), Postives = 170/198 (85.86%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQ----------------------------DFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            +VAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILV+CADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQ                            DFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNK+
Sbjct:  108 EVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVKCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQGILHVICYNLTRNYSIWIVIICRHMYITDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKM 305

HSP 2 Score: 218.394 bits (555), Expect = 4.361e-59
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 1

Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517
            MDARSLA+EMAPVIMWQKDRKPESYRKYWSHP KSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR
Sbjct:  305 MDARSLALEMAPVIMWQKDRKPESYRKYWSHPLKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 406

HSP 3 Score: 197.978 bits (502), Expect = 5.872e-52
Identity = 96/98 (97.96%), Postives = 98/98 (100.00%), Query Frame = 3

Query:  324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617
            MPSAV+QQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVK+RWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR
Sbjct:    1 MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKSRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 98

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A061FZY2_THECC (Small G protein family protein / RhoGAP family protein isoform 3 OS=Theobroma cacao GN=TCM_014873 PE=4 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 4.151e-93
Identity = 151/170 (88.82%), Postives = 161/170 (94.71%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            +VAKKTAQKSK ILTDIERWQKGVASTDVFGVPIE TVQRQQ+ +PIPLILV+CADYLILSG+NSQYLFKAEGDKKVI+QLVS YNQDFNASIPEGV+ IDVAALAKYYIASLPEPLTTFELY+EIK ARSSIHAMRNVLK LPSVNYMTLEF+TALLL VSQKSVLN +
Sbjct:   69 EVAKKTAQKSKIILTDIERWQKGVASTDVFGVPIEDTVQRQQSNRPIPLILVKCADYLILSGLNSQYLFKAEGDKKVIQQLVSTYNQDFNASIPEGVSAIDVAALAKYYIASLPEPLTTFELYNEIKGARSSIHAMRNVLKKLPSVNYMTLEFVTALLLCVSQKSVLNNM 238

HSP 2 Score: 217.624 bits (553), Expect = 1.182e-59
Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 1

Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVW 2514
            MDARSLAMEMAPVIMW+K +KPESYRKYWS PPKSPSKGSMDSTP Y+AWDML DDGEDMDASSHIPLDDG+PVDFGAIEVIQCLIEQHNPIFTDANETVW
Sbjct:  238 MDARSLAMEMAPVIMWEKGQKPESYRKYWSRPPKSPSKGSMDSTPAYTAWDMLADDGEDMDASSHIPLDDGMPVDFGAIEVIQCLIEQHNPIFTDANETVW 338

HSP 3 Score: 114.005 bits (284), Expect = 1.113e-23
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 3

Query:  444 DAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617
            DAKGNV DVAERVGSMVK+RWA LRQPATRHAVQESLISAAATTGTFLRKGITGTKD+
Sbjct:    2 DAKGNVADVAERVGSMVKSRWAVLRQPATRHAVQESLISAAATTGTFLRKGITGTKDK 59

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A061G703_THECC (Small G protein family protein / RhoGAP family protein isoform 1 OS=Theobroma cacao GN=TCM_014873 PE=4 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 9.528e-93
Identity = 151/170 (88.82%), Postives = 161/170 (94.71%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            +VAKKTAQKSK ILTDIERWQKGVASTDVFGVPIE TVQRQQ+ +PIPLILV+CADYLILSG+NSQYLFKAEGDKKVI+QLVS YNQDFNASIPEGV+ IDVAALAKYYIASLPEPLTTFELY+EIK ARSSIHAMRNVLK LPSVNYMTLEF+TALLL VSQKSVLN +
Sbjct:  108 EVAKKTAQKSKIILTDIERWQKGVASTDVFGVPIEDTVQRQQSNRPIPLILVKCADYLILSGLNSQYLFKAEGDKKVIQQLVSTYNQDFNASIPEGVSAIDVAALAKYYIASLPEPLTTFELYNEIKGARSSIHAMRNVLKKLPSVNYMTLEFVTALLLCVSQKSVLNNM 277

HSP 2 Score: 218.394 bits (555), Expect = 1.949e-59
Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 1

Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVW 2514
            MDARSLAMEMAPVIMW+K +KPESYRKYWS PPKSPSKGSMDSTP Y+AWDML DDGEDMDASSHIPLDDG+PVDFGAIEVIQCLIEQHNPIFTDANETVW
Sbjct:  277 MDARSLAMEMAPVIMWEKGQKPESYRKYWSRPPKSPSKGSMDSTPAYTAWDMLADDGEDMDASSHIPLDDGMPVDFGAIEVIQCLIEQHNPIFTDANETVW 377

HSP 3 Score: 189.119 bits (479), Expect = 5.147e-49
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 3

Query:  324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617
            MPSAV+QQWQEKATGFFSSSGVKLKEASQTAGTFVGEVA DAKGNV DVAERVGSMVK+RWA LRQPATRHAVQESLISAAATTGTFLRKGITGTKD+
Sbjct:    1 MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAMDAKGNVADVAERVGSMVKSRWAVLRQPATRHAVQESLISAAATTGTFLRKGITGTKDK 98

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: M5X394_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009450mg PE=4 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 4.162e-91
Identity = 143/171 (83.63%), Postives = 159/171 (92.98%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKVG 1806
            +VAKKTAQKSKTIL+DIERWQKGVASTDVFGVPIEVTVQRQQ+ +PIP ILV+CADYLILSG+N+ YLFK EGDKKVI+QLVS YNQD NAS+PEG+NPIDVAAL K Y+A+LPEPLTTFELY+EIK ARSSIHAMRN+L+ LP+VNY TLEFITALLLRVSQKSVLNK G
Sbjct:  108 EVAKKTAQKSKTILSDIERWQKGVASTDVFGVPIEVTVQRQQSSRPIPHILVKCADYLILSGLNTPYLFKGEGDKKVIQQLVSLYNQDSNASLPEGINPIDVAALIKCYLATLPEPLTTFELYNEIKGARSSIHAMRNMLRRLPTVNYTTLEFITALLLRVSQKSVLNKAG 278

HSP 2 Score: 151.754 bits (382), Expect = 7.414e-37
Identity = 72/98 (73.47%), Postives = 85/98 (86.73%), Query Frame = 3

Query:  324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617
            MPSA + +WQEKA+GFFS+SGVKLKEA Q+AGTFV EV KDAK NVTD+A RVGSM K+RWA L+QP+TRHAVQE LI+AAATTGT  RKG++ TKD+
Sbjct:    1 MPSATSPRWQEKASGFFSTSGVKLKEAGQSAGTFVEEVTKDAKVNVTDMAGRVGSMFKSRWALLQQPSTRHAVQERLITAAATTGTLFRKGLSETKDK 98

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A067DUP8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017326mg PE=4 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.747e-90
Identity = 143/170 (84.12%), Postives = 158/170 (92.94%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            + AKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQ  KP+P ILV+CADYL+LSG+NSQ+LFKAEGDKKVI+ LVS YNQD NAS+PEGVNP DVAALAKYY+ASLPEPLTTFELYDEIK ARSSIHAMRN LK L +VN+MTLE++TALLLRVSQKS+LNK+
Sbjct:  104 EAAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDVAALAKYYLASLPEPLTTFELYDEIKGARSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKM 273

HSP 2 Score: 137.887 bits (346), Expect = 1.044e-31
Identity = 67/98 (68.37%), Postives = 80/98 (81.63%), Query Frame = 3

Query:  324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617
            MPSA++  WQEKA+ FFSSSG KL+EA Q+    VGEVAKDAKGN  DVAERVGS VK+RWA L++P+T+HAVQE LISAAA TG FLR+G + TKD+
Sbjct:    1 MPSAISPPWQEKASEFFSSSGSKLREAGQS----VGEVAKDAKGNAADVAERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLRRGFSETKDK 94

HSP 3 Score: 82.0333 bits (201), Expect = 2.289e-13
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 1

Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDML 2370
            MDARSLAMEMAPVIMWQK+RKPE YR+YW+H  +S SK    +TP +  WDML
Sbjct:  273 MDARSLAMEMAPVIMWQKERKPEFYRQYWNHASRSSSKNMEPATP-HGEWDML 324

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A067DQN1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017326mg PE=4 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 2.916e-90
Identity = 143/170 (84.12%), Postives = 158/170 (92.94%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            + AKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQ  KP+P ILV+CADYL+LSG+NSQ+LFKAEGDKKVI+ LVS YNQD NAS+PEGVNP DVAALAKYY+ASLPEPLTTFELYDEIK ARSSIHAMRN LK L +VN+MTLE++TALLLRVSQKS+LNK+
Sbjct:   23 EAAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDVAALAKYYLASLPEPLTTFELYDEIKGARSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKM 192

HSP 2 Score: 172.94 bits (437), Expect = 3.181e-44
Identity = 75/102 (73.53%), Postives = 87/102 (85.29%), Query Frame = 1

Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517
            MDARSLAMEMAPVIMWQK+RKPE YR+YW+H  +S SK    +TP +  WDML D+ E+MDASS IPLDDG+P+DFGAIEV+QCL+EQHN IFTDANETVWR
Sbjct:  192 MDARSLAMEMAPVIMWQKERKPEFYRQYWNHASRSSSKNMEPATP-HGEWDMLADESEEMDASSAIPLDDGMPIDFGAIEVVQCLMEQHNAIFTDANETVWR 292

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: A0A067DR22_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017326mg PE=4 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.001e-89
Identity = 143/170 (84.12%), Postives = 158/170 (92.94%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            + AKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQ  KP+P ILV+CADYL+LSG+NSQ+LFKAEGDKKVI+ LVS YNQD NAS+PEGVNP DVAALAKYY+ASLPEPLTTFELYDEIK ARSSIHAMRN LK L +VN+MTLE++TALLLRVSQKS+LNK+
Sbjct:  104 EAAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDVAALAKYYLASLPEPLTTFELYDEIKGARSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKM 273

HSP 2 Score: 173.326 bits (438), Expect = 1.389e-43
Identity = 75/102 (73.53%), Postives = 87/102 (85.29%), Query Frame = 1

Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517
            MDARSLAMEMAPVIMWQK+RKPE YR+YW+H  +S SK    +TP +  WDML D+ E+MDASS IPLDDG+P+DFGAIEV+QCL+EQHN IFTDANETVWR
Sbjct:  273 MDARSLAMEMAPVIMWQKERKPEFYRQYWNHASRSSSKNMEPATP-HGEWDMLADESEEMDASSAIPLDDGMPIDFGAIEVVQCLMEQHNAIFTDANETVWR 373

HSP 3 Score: 137.502 bits (345), Expect = 2.476e-31
Identity = 67/98 (68.37%), Postives = 80/98 (81.63%), Query Frame = 3

Query:  324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617
            MPSA++  WQEKA+ FFSSSG KL+EA Q+    VGEVAKDAKGN  DVAERVGS VK+RWA L++P+T+HAVQE LISAAA TG FLR+G + TKD+
Sbjct:    1 MPSAISPPWQEKASEFFSSSGSKLREAGQS----VGEVAKDAKGNAADVAERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLRRGFSETKDK 94

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Match: V4S7M6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005197mg PE=4 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.315e-88
Identity = 141/170 (82.94%), Postives = 158/170 (92.94%), Query Frame = 1

Query: 1294 QVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEGDKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSIHAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKV 1803
            + AKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQ  KP+P ILV+CADYL+LSG++SQ+LFKAEGDKKVI+ LVS YNQD NAS+PEGVNP+DVAALAKYY+ASLPEPLTTFELYDEIK ARSSIHAMRN LK L +VN+MTLE++TALLLR SQKS+LNK+
Sbjct:  104 EAAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLSSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPVDVAALAKYYLASLPEPLTTFELYDEIKGARSSIHAMRNTLKKLSNVNFMTLEYVTALLLRFSQKSLLNKM 273

HSP 2 Score: 173.711 bits (439), Expect = 1.362e-43
Identity = 75/102 (73.53%), Postives = 87/102 (85.29%), Query Frame = 1

Query: 2212 MDARSLAMEMAPVIMWQKDRKPESYRKYWSHPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQCLIEQHNPIFTDANETVWR 2517
            MDARSLAMEMAPVIMWQK+RKPE YR+YW+H  +S SK    +TP +  WDML D+ E+MDASS IPLDDG+P+DFGAIEV+QCL+EQHN IFTDANETVWR
Sbjct:  273 MDARSLAMEMAPVIMWQKERKPEFYRQYWNHASRSSSKNMEPATP-HGEWDMLADESEEMDASSAIPLDDGMPIDFGAIEVVQCLMEQHNAIFTDANETVWR 373

HSP 3 Score: 137.502 bits (345), Expect = 2.499e-31
Identity = 67/98 (68.37%), Postives = 80/98 (81.63%), Query Frame = 3

Query:  324 MPSAVTQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNRWAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDR 617
            MPSA++  WQEKA+ FFSSSG KL+EA Q+    VGEVAKDAKGN  DVAERVGS VK+RWA L++P+T+HAVQE LISAAA TG FLR+G + TKD+
Sbjct:    1 MPSAISPPWQEKASEFFSSSGSKLREAGQS----VGEVAKDAKGNAADVAERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLRRGFSETKDK 94

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
RGAPX_ARATH	7.537e-84	79.41	Uncharacterized Rho GTPase-activating protein At5g...	[more]
GACJJ_DICDI	4.148e-14	33.33	Rho GTPase-activating protein gacJJ OS=Dictyosteli...	[more]
RHG35_RAT	6.433e-14	27.27	Rho GTPase-activating protein 35 OS=Rattus norvegi...	[more]
RHG35_HUMAN	2.035e-13	26.62	Rho GTPase-activating protein 35 OS=Homo sapiens G...	[more]
RHG35_MOUSE	2.105e-13	26.62	Rho GTPase-activating protein 35 OS=Mus musculus G...	[more]
RHG35_CANFA	2.716e-13	26.62	Rho GTPase-activating protein 35 OS=Canis familiar...	[more]
RHG05_MOUSE	4.210e-12	29.80	Rho GTPase-activating protein 5 OS=Mus musculus GN...	[more]
RG68F_DROME	4.901e-12	32.10	Rho GTPase-activating protein 68F OS=Drosophila me...	[more]
RHG05_HUMAN	1.392e-11	29.14	Rho GTPase-activating protein 5 OS=Homo sapiens GN...	[more]
RHG25_MOUSE	2.044e-10	25.99	Rho GTPase-activating protein 25 OS=Mus musculus G...	[more]

Pages

BLAST of g.barbadense_cottongen_reftransV1_0094274 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2TA56_GOSRA	6.487e-105	98.24	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B0NPG4_GOSAR	1.982e-104	98.24	Uncharacterized protein OS=Gossypium arboreum GN=F...	[more]
A0A0D2U777_GOSRA	7.423e-97	84.34	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061FZY2_THECC	4.151e-93	88.82	Small G protein family protein / RhoGAP family pro...	[more]
A0A061G703_THECC	9.528e-93	88.82	Small G protein family protein / RhoGAP family pro...	[more]
M5X394_PRUPE	4.162e-91	83.63	Uncharacterized protein OS=Prunus persica GN=PRUPE...	[more]
A0A067DUP8_CITSI	1.747e-90	84.12	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A067DQN1_CITSI	2.916e-90	84.12	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A067DR22_CITSI	1.001e-89	84.12	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
V4S7M6_9ROSI	1.315e-88	82.94	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000198	Rho GTPase-activating protein domain	SMART	SM00324	RhoGAP_3	coord: 32..178 e-value: 4.6E-13 score: 59.4
IPR000198	Rho GTPase-activating protein domain	PFAM	PF00620	RhoGAP	coord: 35..174 e-value: 5.1E-25 score: 87.9
IPR000198	Rho GTPase-activating protein domain	GENE3D	1.10.555.10		coord: 5..174 e-value: 5.6E-35 score: 120.0
IPR000198	Rho GTPase-activating protein domain	PROSITE	PS50238	RHOGAP	coord: 19..183 score: 26.256
None	No IPR available	PANTHER	PTHR23176	RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN	coord: 1..157
None	No IPR available	PANTHER	PTHR23176:SF32	SUBFAMILY NOT NAMED	coord: 1..157
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 146..156
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 126..145
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 157..178
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..125
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 179..183
None	No IPR available	TMHMM	TMhelix		coord: 157..176
IPR008936	Rho GTPase activation protein	SUPERFAMILY	48350	GTPase activation domain, GAP	coord: 14..174

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0094274 ID=g.barbadense_cottongen_reftransV1_0094274; Name=g.barbadense_cottongen_reftransV1_0094274; organism=Gossypium barbadense; type=contig; length=2888bp
TTTTAAATTGAACTTAATATTAAAATTGAACTGTTACAGCTATAAAAAGA
AAAGTAGCACTTTCGACTTTCGCTATCACCTACCGATTCATCTAGCCAAA
AAGAAAAGTTCGTCTTTGATCGTTGCTTCATTTAAGCAACACCAAAAGGT
AAGTATTTTTTTTTTCAGTTTTCCGTCAAAAATTAGGGCTCTGTATCGAT
CATTTATTTTTTTGATCACTAAAAACGATTATGTATCAATTCAATATCGC
TTATTTTCTCCCAAGTTTCAAATCTTTGCTTTTTTGGTAGTTCCTTTTTT
TCGGTTTGCGTTAATCGGAAGCGATGCCTTCAGCTGTAACGCAGCAGTGG
CAAGAGAAGGCGACTGGTTTTTTTTCTTCCTCAGGGGTGAAGCTGAAGGA
AGCTAGCCAAACCGCCGGCACGTTTGTTGGAGAAGTTGCAAAGGATGCCA
AAGGCAACGTCACTGACGTGGCGGAACGAGTTGGTTCCATGGTCAAAAAC
CGATGGGCGTTTCTCCGGCAGCCAGCGACAAGACATGCTGTGCAAGAGAG
TCTTATATCGGCTGCTGCAACGACCGGAACCTTTTTGAGGAAAGGCATCA
CCGGGACTAAAGACAGGGTTGTTGTTGGGAAAACAAAAGTTGAAGAGGTA
AAAAGAAAAGAATCTCTAAGAGTAACTTTAATTGATCCCTTTTTAATAAA
AAGGATCTTACGGACTATTATATATGTTGTTCAACGTATTAATAATCAAT
TACATCGTGAGAGAGGATGGGCTACCATTTAAATTTTGATGTTTCCTGTA
GCATTTGATATATCTGCCTATAGTGTTATGCCACTGGAATCTTATTCCGT
GCTTGACCAATTATTCTTAATTGTGATTGTTTGTTTTTTAGACTCTGTTT
CTTTTCTGTCTAATTTCCTGCTTTGTAGATTGCCTTTCATTCGGTTCTTT
ACTCTGATAGGTTAAGCTTGTGCTGTTATCAAAATTTTGTACACCACGGA
AAGGGTTTTAGTTGCTTCTTCTTTTTCCATTGGGTATTATTACTTGATTC
ACTTCTCTTATTGCAGAACTATCAAGGTTTCAAGTAACTAGTGAATTTCG
GACCTCTCTATCCATTCGTGTTATTATGATATTTGTTGATGTTACAGTTG
ACCTTGTATAATTAAGAATGCAATATATTGATGCTTAAACAAGGCATTGA
TGTAACTATTTTTTGTCTTACAGACTAGGCTAACCTAGGCCTCTACAGAA
ATCATGGTAAAAAATGACTTATATGTAATGGTGAATTTGTTTACAGGTGG
CAAAAAAGACTGCACAGAAAAGCAAGACAATTTTGACAGATATAGAACGA
TGGCAGAAGGGTGTTGCCAGCACTGATGTATTTGGAGTTCCTATTGAGGT
TACTGTGCAGCGGCAGCAAGCCATCAAGCCCATCCCTCTTATATTGGTGA
GATGTGCAGATTATCTCATATTATCAGGTATAAATTCTCAATACTTGTTT
AAAGCTGAAGGAGATAAGAAGGTCATTGAGCAATTGGTTTCTGCATACAA
CCAAGATTTTAATGCCTCCATACCAGAGGGTGTGAATCCAATTGATGTAG
CAGCTCTAGCCAAATATTATATTGCTAGTCTTCCTGAGCCATTGACCACC
TTTGAGCTTTATGATGAGATCAAAAGTGCCCGTTCTAGCATACATGCTAT
GAGGAATGTACTAAAAATGCTTCCTAGTGTAAATTACATGACTCTTGAGT
TCATCACTGCATTGCTGCTTCGTGTTAGCCAGAAATCAGTCCTTAACAAA
GTAGGAGTTATCTGTTTCTCTCTCTCTATCTGTCTGTTTATCTCTTTGCT
TTCATGCATTTCATTTAAAGGTGGTTTCGAGTAAGGTTGGATATAATTGT
GAAAGCTTATATTTCTCCACATATGTGAGTTGCCATTCAGACCTGATGAA
TTTCTATATTGCCTTGTACTGATGGGCTAAAGCTAACTTGATGATCAAAA
TGATCTCTGTTTCGTGGAAAATTTATCTCTCTGAGGTCATTGTTAGCATC
TTTTTATTAGTCTTATGAACAAAATACCTATATAAATAAAGCAATTTCCT
GGTTTCTTCACTTCCCCATCCCTCCAAACAGTTGTCTTGCAGTTATGTGC
TTATTATTATCTGATAGACAAGTTGTACCTTTAACAATGTTTTATTGTTA
TCTTCCAATAGATGGATGCACGAAGCCTTGCCATGGAAATGGCCCCTGTT
ATTATGTGGCAGAAGGATAGAAAACCAGAATCTTATAGGAAATACTGGAG
CCATCCACCCAAAAGTCCTTCTAAGGGTAGCATGGATTCAACCCCTACTT
ATAGTGCATGGGACATGCTTGAAGATGATGGAGAAGATATGGATGCTTCC
TCCCACATTCCTTTGGATGATGGTATCCCGGTTGATTTTGGTGCCATTGA
GGTCATTCAATGCCTCATAGAACAACACAATCCCATATTTACAGACGCTA
ATGAGACAGTCTGGAGATGACCGAGACTAGATGATTCCTTGTGGGCAGCC
AAGTCAATCATATCCGGGAAAAAGACGAGGACAGAGTAAATATATAAATT
CTTTGAAGGTCTATTTGCCACCTGTTTTGTAACTTTTAACAGAAATAAAG
GCAAATTGGCAATAGTGAATATTTTCACATGAACAAGTTGACACTTACAA
GAATCCTCTGCAAATGCGTTTCACATAAAGTTTTAAATTGCATCACTCTT
GCTTATTCTCATATTTGGGTTTGACATAGTGTAATGGCAAGTAATGCTAC
TTTGACTGAGGTGTAATTATAGGACTTGTAAATGTGTAATTATAAATTTT
AATTTTCTATTAAAAATAGTAATTTGACTAAATGTGTG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR000198	RhoGAP_dom
IPR008936	Rho_GTPase_activation_prot

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

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g.barbadense_cottongen_reftransV1_0094274, g.barbadense_cottongen_reftransV1_0094274 (contig) Gossypium barbadense

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