g.barbadense_cottongen_reftransV1_0094251, g.barbadense_cottongen_reftransV1_0094251 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094251
Unique Nameg.barbadense_cottongen_reftransV1_0094251
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2004
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC6_ARATH (Protein BASIC PENTACYSTEINE6 OS=Arabidopsis thaliana GN=BPC6 PE=1 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 6.640e-129
Identity = 230/354 (64.97%), Postives = 277/354 (78.25%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLM-HQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASG---NISSCPPGFHISRGVKHMQHPQQNVHH----LPHISEVPYNSREMHASDVLPVTP---GTSEAAKSRQGKRA--KEAKVIASNXXXXXXXXXXKQENEDS-DKLMSGKS-HEWKGGQDVGGAGDDLNKQ-LVTTKSDWKGKDL-GLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEG-YDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDDGGHRENGR KA      QGQWLM HQPSMKQ+M+I+AERDAAIQERNLA+SEKKAA+AERDMAFLQRD AIAERNNAI ERD+A+  LQYRENS+ +    N+S+CPPG  ISRGVKH+ HP  + HH    +P ++E  Y +REM  +D LP +P    T E+AK ++GKR   K     A+NK+  K  +KVK+E+ED  +K+M  K+ H++          +D +K  L+ +KSDWK +++ GLNQVV+D++TM PPVCSCTGVLRQCYKWGNGGWQSSCCTT+LSMYPLPA+PNKRHAR+GGRKMSGSAFNKLL+RLAAEG +DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDGGHRENGRHKA----AVQGQWLMQHQPSMKQVMSIIAERDAAIQERNLAISEKKAAVAERDMAFLQRDTAIAERNNAIMERDSALTALQYRENSMVTAPAANMSACPPGCQISRGVKHLHHPHMHHHHQQHHIPQLTENAYETREMEPNDGLPTSPPAGSTLESAKPKRGKRVNPKATTQTAANKRGPKNQRKVKKESEDDLNKIMFVKTTHDY--------TDEDSSKHILIGSKSDWKSQEMVGLNQVVYDETTMPPPVCSCTGVLRQCYKWGNGGWQSSCCTTTLSMYPLPALPNKRHARVGGRKMSGSAFNKLLSRLAAEGHHDLSNPVDLKDHWAKHGTNRYITIK 342
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BBRD_ORYSJ (Barley B recombinant-like protein D OS=Oryza sativa subsp. japonica GN=Os06g0130600 PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 3.073e-93
Identity = 180/349 (51.58%), Postives = 228/349 (65.33%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMHQPSMK-------QIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLP---HISEVPYN-SREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVG--GAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MD+ GHRENGR + DQY+    QW+M Q            ++A+M +RD AI+ER+ AL+EKKAAIAERDMAF QRDAA+AERN A+ ERDNA+A L+    +  + N  +  P   +S G K++ H  Q  H       +++ PY+ +REMH S+  P++     A K+   KR K+    AS  K      +  ++           S +WK   +VG  G GDD +      K++WK ++LGLNQV FDDSTM  P CSCTG LRQCYKWGNGGWQSSCCT ++SMYPLP +PNKRHAR+GGRKMSG AF KLL+RLAAEG+DLS PVDLK HWAKHGTNRYITI+
Sbjct:    1 MDNLGHRENGRQRPDQYKGLHTQWMMPQTQRHLKDHQSMNLLALMNDRDNAIRERDHALAEKKAAIAERDMAFTQRDAAMAERNAAVVERDNALAALELARTNGLNMNNGNGFPQGSLS-GSKNIHHHDQLSHAQSSPLQLADSPYDHAREMHISEAYPISTAPGSAGKA---KRPKKNSSQASPLKRPSGVLRKTKK----------PSGDWK---NVGMSGCGDD-SAHASVMKNEWKDQNLGLNQVAFDDSTMPAPACSCTGKLRQCYKWGNGGWQSSCCTMNISMYPLPVMPNKRHARMGGRKMSGGAFTKLLSRLAAEGHDLSTPVDLKDHWAKHGTNRYITIR 331
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC4_ARATH (Protein BASIC PENTACYSTEINE4 OS=Arabidopsis thaliana GN=BPC4 PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.248e-78
Identity = 157/352 (44.60%), Postives = 206/352 (58.52%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLM---HQPSM--------KQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQ-GKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVT----TKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            M++GG  +N R K D ++ AQ  W M   HQ           K+IM+I+AERDAA+ ERN A+S KK A+A RD A  QRD A++ER+ A+ ERDNA A LQ+ ENSL           F +S G K +              +  +   E H  +V P++    E   ++   KR KE K                                 +G   V   G+DLN+++      +++DW  +D+GLN V FD++TM  P+CSCTG  RQCYKWGNGGWQSSCCTT+LS YPLP +PNKRH+R+GGRKMSG+ F++LL+RL+AEGYDLS PVDLK +WA+HGTNRYITIK
Sbjct:    1 MENGGQYDNARFKPDYFKGAQSMWNMIPQHQIKEQHNALVMNKKIMSILAERDAAVHERNQAVSAKKEAVAARDEALQQRDKALSERDKALIERDNAYAALQHHENSL----------NFALSGG-KCVD------------GDDCFGIGEPHKLEVFPLSTIPPEVTNTKVVNKRKKENK---------------------------------QGLSKVKKVGEDLNRRVPAPGKKSRTDWDSQDVGLNLVTFDETTMPVPMCSCTGSTRQCYKWGNGGWQSSCCTTTLSQYPLPQMPNKRHSRMGGRKMSGNVFSRLLSRLSAEGYDLSCPVDLKDYWARHGTNRYITIK 296
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC5_ARATH (Protein BASIC PENTACYSTEINE5 OS=Arabidopsis thaliana GN=BPC5 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.674e-73
Identity = 151/347 (43.52%), Postives = 203/347 (58.50%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMHQPSM-------KQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVT----TKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            M+ GG  ENGR K D Y+  Q   +M +          K+I++I+AERDAA++ERN A++  K A+A RD A  QRD A++ER+NAI E ++A+  L+YREN+L    I SC       RG       +++  HLP+ S               P++    EAA +R  KR KE+K                           GK             G+DLN+ + +    ++ DW   D+    V FD+ TM  P+C+CTG  RQCYKWGNGGWQSSCCTT+LS YPLP +PNKRH+R+GGRKMSGS F++LL+RLA EG++LS+PVDLK++WA+HGTNRYITIK
Sbjct:    1 MESGGQYENGRYKPDYYKGTQSVNVMPKKEQHNALVMNKKIISILAERDAAVKERNEAVAATKEALASRDEALEQRDKALSERDNAIMETESALNALRYRENNL--NYILSC-----AKRGGSQRFITEES--HLPNPS---------------PISTIPPEAANTRPTKRKKESK--------------------------QGKK-----------MGEDLNRPVASPGKKSRKDWDSNDV---LVTFDEMTMPVPMCTCTGTARQCYKWGNGGWQSSCCTTTLSEYPLPQMPNKRHSRVGGRKMSGSVFSRLLSRLAGEGHELSSPVDLKNYWARHGTNRYITIK 283
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC7_ARATH (Protein BASIC PENTACYSTEINE7 OS=Arabidopsis thaliana GN=BPC7 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.605e-43
Identity = 71/115 (61.74%), Postives = 87/115 (75.65%), Query Frame = -3 
Query:  566 TKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 910
            TK + K  D+ ++   FD S + PPVCSCTGV R CYKWG GGWQSSCCT S+S YPLP    +  AR+ GRKMS  A+ KLL RLA EGYDLS+P+DLK+HWA+HGTN+++TIK
Sbjct:  112 TKREKKNLDINIDISSFDTSGVPPPVCSCTGVSRVCYKWGMGGWQSSCCTISISTYPLPMSTTRPGARLAGRKMSNGAYVKLLARLADEGYDLSHPLDLKNHWARHGTNKFVTIK 226
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC3_ARATH (Protein BASIC PENTACYSTEINE3 OS=Arabidopsis thaliana GN=BPC3 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.211e-39
Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = -3 
Query:  566 KGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 895
            K  ++ +N V  D   +  PVCSCTG+ +QCY+WG GGWQS+CCTT++SMYPLP    +R ARI GRKMS  AF K+L +L+++G+D SNP+DLK HWAKHGTN+++TI+
Sbjct:  160 KCIEMVINGVSMDIGGLPVPVCSCTGMPQQCYRWGCGGWQSACCTTNVSMYPLPVNTKRRGARIAGRKMSQGAFRKVLEKLSSDGFDFSNPIDLKSHWAKHGTNKFVTIR 269
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BBR_HORVU (Protein Barley B recombinant OS=Hordeum vulgare GN=BBR PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.137e-39
Identity = 65/115 (56.52%), Postives = 86/115 (74.78%), Query Frame = -3 
Query:  566 TKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 910
            ++   K  ++ +N + FD S +  PVCSCTG  +QCY+WG GGWQS+CCTTS+S YPLP    +R ARI GRKMS  AF K+L +LA EGY+L+NP+DLK  WAKHGTN+++TI+
Sbjct:  236 SRGPLKPVEMVINGIDFDISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 350
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC2_ARATH (Protein BASIC PENTACYSTEINE2 OS=Arabidopsis thaliana GN=BPC2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.271e-38
Identity = 61/110 (55.45%), Postives = 84/110 (76.36%), Query Frame = -3 
Query:  566 KGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 895
            K  DL +N V  D S +  P+C+CTG  +QCY+WG GGWQS+CCTT++SM+PLP    +R ARI GRKMS  AF K+L +LA++G++  NP+DLK HWA+HGTN+++TI+
Sbjct:  170 KSVDLVINGVSMDISGLPVPICTCTGAPQQCYRWGCGGWQSACCTTNISMHPLPMSTKRRGARISGRKMSQGAFKKVLEKLASDGFNFGNPIDLKSHWARHGTNKFVTIR 279
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BPC1_ARATH (Protein BASIC PENTACYSTEINE1 OS=Arabidopsis thaliana GN=BPC1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.252e-38
Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = -3 
Query:  566 KGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 895
            K  DL +N V  D S +  PVC+CTG  +QCY+WG GGWQS+CCTT++S+YPLP    +R ARI GRKMS  AF K+L +L+ EGY   N +DLK HWA+HGTN+++TI+
Sbjct:  174 KSVDLVINGVSMDISGLPVPVCTCTGTPQQCYRWGCGGWQSACCTTNISVYPLPMSTKRRGARISGRKMSQGAFKKVLEKLSTEGYSFGNAIDLKSHWARHGTNKFVTIR 283
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Match: BBRB_ORYSJ (Barley B recombinant-like protein B OS=Oryza sativa subsp. japonica GN=Os10g0115200 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.548e-37
Identity = 63/110 (57.27%), Postives = 84/110 (76.36%), Query Frame = -3 
Query:  566 KDLGL--NQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 889
            K++G+  N +  D S +  P+CSCTG  +QCY+WG GGWQS+CCTT++S YPLP    +R ARI GRKMS  AF K+L +LA EGY+L+NP+DLK  WAKHGTN+++TI+
Sbjct:  232 KNIGMVINGIDLDLSRIPTPICSCTGAPQQCYRWGAGGWQSACCTTTISTYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 341
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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: A0A0B0NBF7_GOSAR (Basic pentacysteine6-like protein OS=Gossypium arboreum GN=F383_14599 PE=4 SV=1)

HSP 1 Score: 651.744 bits (1680), Expect = 0.000e+0
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDDGGHRENGRLKADQYRTAQGQWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDAAIAERNNAIAERDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNKKATKPPKKVKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK
Sbjct:    1 MDDGGHRENGRLKADQYRTAQGQWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDAAIAERNNAIAERDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNKKATKPPKKVKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 336
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: A0A0D2Q547_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G124900 PE=4 SV=1)

HSP 1 Score: 649.432 bits (1674), Expect = 0.000e+0
Identity = 335/336 (99.70%), Postives = 336/336 (100.00%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDDGGHRENGRLKADQYRTAQGQWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDAAIAERNNAIAERDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQ+VHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNKKATKPPKKVKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK
Sbjct:    1 MDDGGHRENGRLKADQYRTAQGQWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDAAIAERNNAIAERDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQHVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNKKATKPPKKVKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 336
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: A0A0D2MA32_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G124900 PE=4 SV=1)

HSP 1 Score: 620.157 bits (1598), Expect = 0.000e+0
Identity = 325/336 (96.73%), Postives = 326/336 (97.02%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDDGGHRENGRLKADQYRTAQGQ          IMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDAAIAERNNAIAERDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQ+VHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNKKATKPPKKVKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK
Sbjct:    1 MDDGGHRENGRLKADQYRTAQGQ----------IMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDAAIAERNNAIAERDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQHVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNKKATKPPKKVKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 326
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: A0A061FDZ3_THECC (Basic pentacysteine 6 OS=Theobroma cacao GN=TCM_034171 PE=4 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 304/336 (90.48%), Postives = 319/336 (94.94%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDD GHRENGRLK DQYRTAQGQWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDAAIAERN+AIAERDNAIANLQYRENSLA+GN+ SCPPG  ISRGVKHMQHPQQNVHHLPHI+E PYNSREMH+SD LPVTPGTSE+AKS+QGKR KEAKVIAS+KKA KP KKVK+ENED +K+M GKSHEWKGGQD GG GDDLNKQLV TKSDWKG+DLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTT+LSMYPLPAVPNKRH RIGGRKMSGSAFNKLL+RLAAEG+DLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDSGHRENGRLKTDQYRTAQGQWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDAAIAERNSAIAERDNAIANLQYRENSLATGNMPSCPPGCQISRGVKHMQHPQQNVHHLPHINEAPYNSREMHSSDTLPVTPGTSESAKSKQGKRGKEAKVIASSKKAPKPLKKVKRENEDLNKIMFGKSHEWKGGQDAGGGGDDLNKQLVATKSDWKGQDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTTLSMYPLPAVPNKRHTRIGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 336
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: A0A067KPK2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08249 PE=4 SV=1)

HSP 1 Score: 528.865 bits (1361), Expect = 1.325e-180
Identity = 269/337 (79.82%), Postives = 297/337 (88.13%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMH-QPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDDGGHRENGR KADQY+TAQGQWLM  QPSMKQIMAIMAERDAAI ERN+A+SEKKAAIAERDMAF+QRDAAIAERNNAI +RD+AIA LQYRENSL  GN+SSCPPG  ISRGVKHM HPQQ+  HLPH SEV Y +REM  SD +PV+P   EAAKSR+GKR+K+AK +  NKK +K P+KVK+E+ED  K+M GKSH+WK GQD+ G GDDLNKQLV +KSDWKG DLGLNQ+ FDDSTM  PVCSCTGV RQCYKWGNGGWQSSCCTT+LSMYPLPAVPNKRHAR+GGRKMSGSAF+KLL+RLAAEGYDLSNPVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDGGHRENGRHKADQYKTAQGQWLMQAQPSMKQIMAIMAERDAAIHERNMAISEKKAAIAERDMAFIQRDAAIAERNNAILDRDSAIATLQYRENSLTGGNMSSCPPGCQISRGVKHMHHPQQHAQHLPHSSEVSYGTREMQTSDTVPVSPVGPEAAKSRRGKRSKDAKAMPPNKKTSKSPRKVKRESEDLTKVMFGKSHDWKNGQDLAGGGDDLNKQLVVSKSDWKGNDLGLNQIAFDDSTMPAPVCSCTGVHRQCYKWGNGGWQSSCCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFSKLLSRLAAEGYDLSNPVDLKEHWAKHGTNRYITIK 337
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: B9R849_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1596660 PE=4 SV=1)

HSP 1 Score: 520.005 bits (1338), Expect = 4.488e-177
Identity = 267/339 (78.76%), Postives = 300/339 (88.50%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMH-QPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNI-SSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVT-TKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDDGGHRENGR KADQY+TAQGQWLM  QPSMKQIMAIMAERDAAI ERN+A+SEKKAAIAERDMAFLQRD+AIAERNNAI ERDNAIA LQYRENS+ SGN+ SSCPPG  ISRGVKHM HPQQ+ HH+PH SE  Y++REM  SD LP++P  SEAAK R+ KR+K+AK+  SNKK +K P+K+K+E+ED +K+M GKSHEWK GQD+GG  DDLNKQLV  +KSDWKG DLGLNQ+ FD+STM  PVCSCTGV RQCYKWGNGGWQSSCCTT+LSM+PLPAVPNKRHAR+GGRKMSGSAF+KLL+RLAAEGYDLS+PVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDGGHRENGRHKADQYKTAQGQWLMQAQPSMKQIMAIMAERDAAIHERNMAISEKKAAIAERDMAFLQRDSAIAERNNAIMERDNAIATLQYRENSIPSGNMPSSCPPGCQISRGVKHMHHPQQHAHHMPHSSEASYSTREMQTSDTLPMSPVGSEAAKPRRVKRSKDAKMAPSNKKTSKSPRKIKRESEDLNKVMFGKSHEWKNGQDMGGGADDLNKQLVVASKSDWKGHDLGLNQIAFDESTMPAPVCSCTGVFRQCYKWGNGGWQSSCCTTTLSMHPLPAVPNKRHARVGGRKMSGSAFSKLLSRLAAEGYDLSSPVDLKEHWAKHGTNRYITIK 339
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: V4TA25_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001400mg PE=4 SV=1)

HSP 1 Score: 517.694 bits (1332), Expect = 2.035e-175
Identity = 270/342 (78.95%), Postives = 295/342 (86.26%), Query Frame = -3 
Query:  566 FLESSMDDGGHRENGRLKADQYRTAQGQWLMH-QPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1588
            F  S MDDGGHRENGR KADQY+ AQGQWLMH QPSMKQIM IMAERDAA+QERNLA+SEKKAAIAERDMAFLQRD AIAERNNAI ERDNAIA+LQYRENSL  GN+SSCPPG  ISRGVKHM HPQQ+VH L H+SE  Y SREMH  D LPV+PG SEAAK R+ KRAKE KV++ NKK  K P+KVK+ENED +K++ GK  EWK  QD+ G  DD+NKQ   +KSDWKG+ LGLNQV FD+STM PP CSCTGVLRQCYKWGNGGWQS+CCTTSLSMYPLPAVPNKRHAR+GGRKMSGSAFNKLLTRLAAEG+DLS+PVDLK HWAKHGTNRYITIK
Sbjct:   56 FCASQMDDGGHRENGRHKADQYKAAQGQWLMHHQPSMKQIMTIMAERDAALQERNLAISEKKAAIAERDMAFLQRDTAIAERNNAILERDNAIASLQYRENSLG-GNMSSCPPGCQISRGVKHMHHPQQHVHQLHHVSEAAY-SREMHTGDALPVSPGASEAAKPRRYKRAKEPKVLSPNKKTAKSPRKVKRENEDLNKVVFGKPSEWKSVQDLDGGDDDVNKQSTASKSDWKGQVLGLNQVTFDESTMPPPACSCTGVLRQCYKWGNGGWQSACCTTSLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLTRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 395
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: A0A067H1J8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018368mg PE=4 SV=1)

HSP 1 Score: 515.768 bits (1327), Expect = 3.650e-175
Identity = 270/344 (78.49%), Postives = 295/344 (85.76%), Query Frame = -3 
Query:  566 NNFLESSMDDGGHRENGRLKADQYRTAQGQWLMH-QPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1594
            + F  S MDDGGHRENGR KADQY+ AQGQWLMH QPSMKQIM IMAERDAA+QERNLA SEKKAAIAERDMAFLQRD AIAERNNAI ERDNAIA+LQYRENSL  GN+SSCPPG  ISRGVKHM HPQQ+VH L H+SE  Y SREMH  D LPV+PG SEAAK R+ KRAKE KV++ NKK  K P+KVK+ENED +K++ GK  EWK  QD+ G  DD+NKQ   +KSDWKG+ LGLNQV FD+STM PP CSCTGVLRQCYKWGNGGWQS+CCTTSLSMYPLPAVPNKRHAR+GGRKMSGSAFNKLLTRLAAEG+DLS+PVDLK HWAKHGTNRYITIK
Sbjct:   16 STFCASQMDDGGHRENGRHKADQYKAAQGQWLMHHQPSMKQIMTIMAERDAALQERNLATSEKKAAIAERDMAFLQRDTAIAERNNAILERDNAIASLQYRENSLG-GNMSSCPPGCQISRGVKHMHHPQQHVHQLHHVSEAAY-SREMHTGDALPVSPGASEAAKPRRYKRAKEPKVLSPNKKTAKSPRKVKRENEDLNKVVFGKPSEWKSVQDLDGGDDDVNKQSTASKSDWKGQVLGLNQVTFDESTMPPPACSCTGVLRQCYKWGNGGWQSACCTTSLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLTRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 357
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: V4TFC0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001400mg PE=4 SV=1)

HSP 1 Score: 513.457 bits (1321), Expect = 1.322e-174
Identity = 268/337 (79.53%), Postives = 293/337 (86.94%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMH-QPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDDGGHRENGR KADQY+ AQGQWLMH QPSMKQIM IMAERDAA+QERNLA+SEKKAAIAERDMAFLQRD AIAERNNAI ERDNAIA+LQYRENSL  GN+SSCPPG  ISRGVKHM HPQQ+VH L H+SE  Y SREMH  D LPV+PG SEAAK R+ KRAKE KV++ NKK  K P+KVK+ENED +K++ GK  EWK  QD+ G  DD+NKQ   +KSDWKG+ LGLNQV FD+STM PP CSCTGVLRQCYKWGNGGWQS+CCTTSLSMYPLPAVPNKRHAR+GGRKMSGSAFNKLLTRLAAEG+DLS+PVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDGGHRENGRHKADQYKAAQGQWLMHHQPSMKQIMTIMAERDAALQERNLAISEKKAAIAERDMAFLQRDTAIAERNNAILERDNAIASLQYRENSLG-GNMSSCPPGCQISRGVKHMHHPQQHVHQLHHVSEAAY-SREMHTGDALPVSPGASEAAKPRRYKRAKEPKVLSPNKKTAKSPRKVKRENEDLNKVVFGKPSEWKSVQDLDGGDDDVNKQSTASKSDWKGQVLGLNQVTFDESTMPPPACSCTGVLRQCYKWGNGGWQSACCTTSLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLTRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 335
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Match: A0A067HAT9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018368mg PE=4 SV=1)

HSP 1 Score: 512.301 bits (1318), Expect = 3.082e-174
Identity = 268/337 (79.53%), Postives = 292/337 (86.65%), Query Frame = -3 
Query:  566 MDDGGHRENGRLKADQYRTAQGQWLMH-QPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDXXXXXXXXXXXXRDNAIANLQYRENSLASGNISSCPPGFHISRGVKHMQHPQQNVHHLPHISEVPYNSREMHASDVLPVTPGTSEAAKSRQGKRAKEAKVIASNXXXXXXXXXXKQENEDSDKLMSGKSHEWKGGQDVGGAGDDLNKQLVTTKSDWKGKDLGLNQVVFDDSTMAPPVCSCTGVLRQCYKWGNGGWQSSCCTTSLSMYPLPAVPNKRHARIGGRKMSGSAFNKLLTRLAAEGYDLSNPVDLKHHWAKHGTNRYITIK 1573
            MDDGGHRENGR KADQY+ AQGQWLMH QPSMKQIM IMAERDAA+QERNLA SEKKAAIAERDMAFLQRD AIAERNNAI ERDNAIA+LQYRENSL  GN+SSCPPG  ISRGVKHM HPQQ+VH L H+SE  Y SREMH  D LPV+PG SEAAK R+ KRAKE KV++ NKK  K P+KVK+ENED +K++ GK  EWK  QD+ G  DD+NKQ   +KSDWKG+ LGLNQV FD+STM PP CSCTGVLRQCYKWGNGGWQS+CCTTSLSMYPLPAVPNKRHAR+GGRKMSGSAFNKLLTRLAAEG+DLS+PVDLK HWAKHGTNRYITIK
Sbjct:    1 MDDGGHRENGRHKADQYKAAQGQWLMHHQPSMKQIMTIMAERDAALQERNLATSEKKAAIAERDMAFLQRDTAIAERNNAILERDNAIASLQYRENSLG-GNMSSCPPGCQISRGVKHMHHPQQHVHQLHHVSEAAY-SREMHTGDALPVSPGASEAAKPRRYKRAKEPKVLSPNKKTAKSPRKVKRENEDLNKVVFGKPSEWKSVQDLDGGDDDVNKQSTASKSDWKGQVLGLNQVTFDESTMPPPACSCTGVLRQCYKWGNGGWQSACCTTSLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLTRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 335
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 12
Match NameE-valueIdentityDescription
BPC6_ARATH6.640e-12964.97Protein BASIC PENTACYSTEINE6 OS=Arabidopsis thalia... [more]
BBRD_ORYSJ3.073e-9351.58Barley B recombinant-like protein D OS=Oryza sativ... [more]
BPC4_ARATH1.248e-7844.60Protein BASIC PENTACYSTEINE4 OS=Arabidopsis thalia... [more]
BPC5_ARATH1.674e-7343.52Protein BASIC PENTACYSTEINE5 OS=Arabidopsis thalia... [more]
BPC7_ARATH3.605e-4361.74Protein BASIC PENTACYSTEINE7 OS=Arabidopsis thalia... [more]
BPC3_ARATH3.211e-3957.27Protein BASIC PENTACYSTEINE3 OS=Arabidopsis thalia... [more]
BBR_HORVU6.137e-3956.52Protein Barley B recombinant OS=Hordeum vulgare GN... [more]
BPC2_ARATH2.271e-3855.45Protein BASIC PENTACYSTEINE2 OS=Arabidopsis thalia... [more]
BPC1_ARATH5.252e-3856.36Protein BASIC PENTACYSTEINE1 OS=Arabidopsis thalia... [more]
BBRB_ORYSJ1.548e-3757.27Barley B recombinant-like protein B OS=Oryza sativ... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0094251 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0NBF7_GOSAR0.000e+0100.00Basic pentacysteine6-like protein OS=Gossypium arb... [more]
A0A0D2Q547_GOSRA0.000e+099.70Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2MA32_GOSRA0.000e+096.73Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061FDZ3_THECC0.000e+090.48Basic pentacysteine 6 OS=Theobroma cacao GN=TCM_03... [more]
A0A067KPK2_JATCU1.325e-18079.82Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
B9R849_RICCO4.488e-17778.76Putative uncharacterized protein OS=Ricinus commun... [more]
V4TA25_9ROSI2.035e-17578.95Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067H1J8_CITSI3.650e-17578.49Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4TFC0_9ROSI1.322e-17479.53Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067HAT9_CITSI3.082e-17479.53Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..88
NoneNo IPR availablePANTHERPTHR31421:SF2PROTEIN BASIC PENTACYSTEINE6coord: 6..194
coord: 215..340
IPR010409GAGA-binding transcriptional activatorSMARTSM01226GAGA_bind_2coord: 5..340
e-value: 4.2E-169
score: 577.8
IPR010409GAGA-binding transcriptional activatorPFAMPF06217GAGA_bindcoord: 5..340
e-value: 8.4E-102
score: 341.3
IPR010409GAGA-binding transcriptional activatorPANTHERPTHR31421FAMILY NOT NAMEDcoord: 6..194
coord: 215..340

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094251 ID=g.barbadense_cottongen_reftransV1_0094251; Name=g.barbadense_cottongen_reftransV1_0094251; organism=Gossypium barbadense; type=contig; length=2004bp
GATCCATTTAGTAATGGGACTAATTTGATACAGTCCTTACAATACAGTTT
GATACAGTCCTTACAATACAGGGACTTCCCAGGTACTTAATTCTTTATTT
ATATGGTTACCTAAAACCTCTGGTTATCAAATTGTCATCCTACCTATTAG
AGAAGCAAATTTGGTGGATTAAGCTAATAAACTGAAACTTGATTCAAGTA
CAACAAGACGTTTGAGGTACAGTACTTTTACAATTAAGTAGAGAGCTACA
GTCAACATAGTGCCAAGTTGACAACCCCATCATTTTTCCAAGCTTGGATG
TGCCAATGGTAATGGATACTTTCTCCTCTCTTCAAATACCAGGCTTGCTA
ATGGAGGATCGAGGCATATCGGAGGGGGCGTTTCCAGGGAAACCCAAAAT
TAAGTTGGCATTACCCACCTACTACTATTCCTTACTACAGTTATTTCCGG
ATCATTTATTTTTCCTACACTGCTACAATGACTAACGAAAGAAACATGAG
CCATGGCTGACTCTTCTCTACTTCTCCATACCATCCCATTTGCATTTGGT
ATCTTGAGCAACCTACTTGATGGTGATGTAGCGGTTTGTCCCATGCTTGG
CCCAGTGGTGCTTAAGATCAACAGGGTTGGACAAATCATAACCTTCTGCT
GCAAGCCGAGTAAGCAGCTTGTTGAAAGCGCTTCCACTCATCTTTCTGCC
TCCGATTCGGGCATGTCTTTTGTTGGGAACTGCTGGCAAAGGATACATTG
ACAAGGAGGTTGTGCAACATGAAGATTGCCATCCCCCGTTTCCCCATTTA
TAGCACTGTCTTAGGACTCCGGTGCAGGAACAAACAGGCGGTGCCATAGT
CGAGTCATCAAATACAACTTGATTCAACCCCAGATCCTTACCTTTCCAAT
CAGACTTCGTTGTCACTAGCTGTTTGTTGAGATCATCACCTGCACCACCC
ACATCTTGTCCACCCTTCCACTCATGTGACTTGCCAGACATAAGCTTATC
CGAGTCCTCGTTCTCTTGTTTTACCTTTTTTGGAGGCTTTGTAGCCTTCT
TGTTAGATGCAATTACCTTGGCCTCTTTTGCTCGTTTACCCTGTCTTGAC
TTTGCAGCTTCAGAGGTACCTGGCGTCACTGGTAGGACATCACTTGCATG
CATTTCCCTTGAGTTATAAGGAACTTCACTAATGTGGGGCAGATGGTGAA
CGTTCTGCTGTGGATGTTGCATGTGCTTCACTCCACGTGAGATATGGAAC
CCTGGAGGACAAGAGGATATATTGCCAGATGCCAAGGAGTTCTCTCGATA
CTGCAGATTTGCTATGGCATTATCACGTTCCGCTATAGCATTATTTCGCT
CAGCAATCGCTGCATCTCGCTGCAAGAATGCCATATCTCTCTCAGCAATA
GCTGCCTTCTTCTCAGAAAGTGCTAAATTCCTTTCTTGAATAGCTGCGTC
TCGTTCAGCCATAATGGCCATTATCTGCTTCATTGATGGCTGATGCATCA
GCCACTGGCCCTGAGCTGTTCTATACTGATCTGCTTTAAGTCTTCCATTT
TCACGATGCCCACCATCATCCATCGAAGACTCCAGGAAATTGTTGAGGTC
GACAAATACAGTCTCAGAACTCCGCTGTGAGGGTTGTATTAGTCAAGCAA
GCATCGCATCGCATCACTTTGGGGCAGACAATCCTTACTATCGAAAGGCG
TATGAGGAGCAAAACCACATCCTTTTAGCAGCTGATCTTCCCTGAATTAC
AACAGTGGAAGAATTAAAGAGGAAATAGATGGGAAATCAAGACATGAATT
TTGATAAGTTGAAGAAATATGTGGAAAGGAAGAGTGGAAAGAAAGGAAAA
ACAGAGGAATTTTTCCTTACTTTTTGTGTCCTGAGACCTTGATTTTCCAC
TGTAGTGTCGTCACGTTCCGCGGGTGGGCTATAAACCTAAGCACTCAATC
ACACAATCCATCGCCTAAGGCTAATCCATTTTTGTTTTAATAAAACTTGG
AATT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR010409GAGA-bd_tscrpt_act