g.barbadense_cottongen_reftransV1_0095074, g.barbadense_cottongen_reftransV1_0095074 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0095074
Unique Nameg.barbadense_cottongen_reftransV1_0095074
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3001
Homology
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: REM19_ARATH (B3 domain-containing protein REM19 OS=Arabidopsis thaliana GN=REM19 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.335e-15
Identity = 53/159 (33.33%), Postives = 79/159 (49.69%), Query Frame = 1
Query: 1588 SPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPV 2061
            +PN    NS     + G      RS   E+ S  +R +TA E+  AV  A  FE T NP F +V+RPSY+   C M++PS F  K+L+     + L     K W  +       K   A    GW EF  +N++  GD+CVFEL++  + +++V  + V
Sbjct:   74 NPNPEEVNSS----TPGGDDSENRSKFYESASARKRTVTAEERERAVNAAKTFEPT-NPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKL-QLGEKQWPVRCLY----KAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRV 222          

HSP 2 Score: 70.8626 bits (172), Expect = 4.518e-12
Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            ++RA   A  F  +NP F VV+ PSY+     +++P  F ++YL      +   +  + W V    +   K G+AKF S+ W +F  +N +  GDVCVFEL+     +LEV   R
Sbjct:  112 RERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPV----RCLYKAGRAKF-SQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFR 221          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.272e-14
Identity = 55/164 (33.54%), Postives = 80/164 (48.78%), Query Frame = 1
Query: 1591 PNQHGQNSK----LEVLSSGISSD--AQRSVTTEALSCVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPV 2061
            P + G+  K     E+ SS    D    RS   E+ S  +R +TA E+  A+  A  FE T NP F +V+RPSY+   C M++PS F  K+L+             K W  +       K   A    GW EF  +N+L  GD+CVFEL++  + ++KV  + V
Sbjct:  180 PKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPT-NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGI-SGFIKVQLAEKQWPVRCL----YKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337          

HSP 2 Score: 69.3218 bits (168), Expect = 5.034e-11
Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            ++RA   A  F  +NP F VV+ PSY+     +++P  F ++YL      +   +  + W V    +   K G+AKF S+ W +F  +N L  GDVCVFEL+     +L+V   R
Sbjct:  227 RERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPV----RCLYKAGRAKF-SQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 336          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y1176_ORYSJ (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica GN=Os11g0197600 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.497e-12
Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 1
Query: 1645 SDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVV 2064
            S  QR +T   +S  + +T  EK HA+Q A  F+S +NP  + +M  SYV     M IP  F R+ L      +TL +  GK W   +  Y +  +      GGW +F   N+L   D+CVFEL++   I  KV IY VV
Sbjct:  261 SKGQRQLT--VISQRRPVTEAEKDHALQRAREFKS-KNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSD--RSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNI--KVHIYRVV 393          

HSP 2 Score: 68.1662 bits (165), Expect = 1.524e-10
Identity = 83/359 (23.12%), Postives = 142/359 (39.55%), Query Frame = 1
Query: 1807 RMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLD--------------DSPLDQKTKKKMTSPSFQPCKLMRT--NPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYG--KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMV-LRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            RM IPS+F +         ++L + +G  W A+     E          GW EFV DN +  G   VF   K  +  + V     +   S      +   I+        +  A  + ++ A  P+ +E   +T      +D              ++ + + +++K    S    K+  T  N +  +     +     KS N  +L + + GE+    R   + +       +  PV    K  A   A  F++ NP    ++  SY+     ++IP EFV+  L  + + + L    G+ W V Y   +    G    G   WG+FA  N LE  DVCVFEL+ ++   ++V I+R
Sbjct:   44 RMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEG----FFFVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGIDKISTFSAHPSKNVIIKTESDEGGMVTAAITTEKMA--PALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKRAGASAGKSKVTSTSHNSTRGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRRGRCVSKGQRQLTVISQRRPVTEAEKDHALQRAREFKSKNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGG---WGKFAVGNNLEKFDVCVFELVQKDN--IKVHIYR 391          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y1235_ORYSJ (B3 domain-containing protein Os01g0723500 OS=Oryza sativa subsp. japonica GN=Os01g0723500 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.451e-8
Identity = 43/131 (32.82%), Postives = 60/131 (45.80%), Query Frame = 1
Query: 1696 LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAH--LYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKA 2082
            +   E+  A +IA AF S   P  +I M   +V     M  P+ F+R+ L   + ++ L +  GK W   +        PN    L  GWC F   N L  GD CVFEL+   E   +V I+ VV+ A  A
Sbjct:  267 VATAERQRATEIAHAFRSP-LPYCVIRMSTMHVYYSFMMRFPTGFSRQHLPRERTDVVLRDPGGKVWSVLYI-------PNTRDRLSRGWCAFARGNCLEEGDYCVFELVAAAEF--RVHIFRVVEPAVPA 387          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y6112_ORYSJ (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.485e-8
Identity = 31/88 (35.23%), Postives = 46/88 (52.27%), Query Frame = 1
Query: 1756 NPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELI 2019
            NP F  ++  S++  K +M+IP  F  +          + +S GK+W   +  + + KK +A    GW EF  DN L VGD CVFEL+
Sbjct:   53 NPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKKLDA----GWSEFAVDNRLLVGDACVFELV 136          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y3216_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 6.149e-8
Identity = 44/133 (33.08%), Postives = 64/133 (48.12%), Query Frame = 1
Query: 1675 ALSCV----QRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMF-IPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYP 2058
             L+C+     RLT ++K        A  S E P++  ++R S V GK +   I   +   +L   + N+TL    GK W     R  + +     L  GW  F ++N+L VGDIC+FEL+K  E  M V I P
Sbjct:  900 VLNCILPKHTRLTDMQKQQLESKVGAIHS-EIPIYGCILRKSRVHGKSQTVDICREYADVYLPFKELNMTL-QRHGKNWEV-LCRTKDTR--TKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHIIP 1027          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0B0P1A8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_26429 PE=4 SV=1)

HSP 1 Score: 849.736 bits (2194), Expect = 0.000e+0
Identity = 421/426 (98.83%), Postives = 424/426 (99.53%), Query Frame = 1
Query: 1570 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEI 2847
            KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEK HAVQIASAF+STENPVFM+VMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKV IYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVRNDRERRSSARRCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLI+I
Sbjct:  409 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKTHAVQIASAFKSTENPVFMVVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVQIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVRNDRERRSSARRCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIKI 834          

HSP 2 Score: 289.656 bits (740), Expect = 0.000e+0
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 3
Query: 1149 GAICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSELKDSKLKTQKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQPLTPTEKQRATDIASWSSLRL 1568
            G ICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSELKDSKLKTQKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQPLTPTEKQRATDIASWSSLRL
Sbjct:  252 GDICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSELKDSKLKTQKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQPLTPTEKQRATDIASWSSLRL 391          

HSP 3 Score: 225.328 bits (573), Expect = 2.907e-58
Identity = 118/204 (57.84%), Postives = 143/204 (70.10%), Query Frame = 1
Query: 1651 AQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKK 2262
            A+ SV TE LSC Q+LT  EKA AVQIASAF+STE+PVFM++MRPS V  K RM IP +F  KFL  + CNLTLCNS GKTW   F+R  ++KK +A LYGGW  FV+DN +NVGDICVFELI+ PEILMKV IYP  KNAS AC  QA  SI S+++T SLVS  +  CQQ+  P SS E   L DS +++  +      TK+
Sbjct:  138 ARPSVKTEVLSCPQKLTDTEKAQAVQIASAFKSTEHPVFMVLMRPSSVCYKYRMVIPLDFALKFLPKHNCNLTLCNSAGKTWPVTFYRNTQSKKLSAQLYGGWQTFVKDNRINVGDICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSE---LKDSKLKTQKNIDFQNSTKE 338          

HSP 4 Score: 89.7373 bits (221), Expect = 5.426e-15
Identity = 80/251 (31.87%), Postives = 102/251 (40.64%), Query Frame = 3
Query: 1005 SMFTSKTPHFFKVILQETITHG--RLGIPRNFVRKYGNQLSSHVKL------------------EVPN------------------GAICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSE-----------LKDSKL-----------------------------------KTQKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQ 1505
            S F S     F V+++ +   G  R+ IP NF RK+      ++ L                  + PN                  G ICVFELI+ PEILMKVQIYP  KNAS AC  QA  SI S+++T SLVS  +  CQQ+  P SS E           L DS L                                   K +K+++FQ  TKE+ GE +   +ND    S    C KPD V   Q
Sbjct:  464 SAFKSTENPVFMVVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVQIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVRNDRERRSSARRCPKPDPVYGKQ 714          

HSP 5 Score: 69.3218 bits (168), Expect = 1.338e-8
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 1
Query: 2455 CPKPDPVYGKQRACVGASAFR-TSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSG-EMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIH 2823
            CP+      K +A   ASAF+ T +P F V++ PS +     + IP++F  ++L K    + L    G+ W V + R   +K   A+     W  F KDN++ VGD+CVFEL+ +   L++V I+
Sbjct:  149 CPQKLTDTEKAQAVQIASAFKSTEHPVFMVLMRPSSVCYKYRMVIPLDFALKFLPKHNCNLTLCNSAGKTWPVTFYRNTQSKKLSAQLYG-GWQTFVKDNRINVGDICVFELIRQPEILMKVQIY 272          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2VJR0_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_013G245600 PE=4 SV=1)

HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0
Identity = 309/426 (72.54%), Postives = 342/426 (80.28%), Query Frame = 1
Query: 1570 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEI 2847
            KKMRI+S NQH QNSKLEVLSSG S DAQR+V T+A SCVQRL A EKAHAVQIASAFESTENPVFM VM+PSYV G CRMFIPS+F RKFLT++K NLTLCNSTGKTWHAK + Y  NKKPNAHLYGGW EFVEDNHLNVGDICVFELIK+PEILMK  IYP VKNASKA   Q+LGSIVS+VK R LVSDA+ +CQQS  P SSRE  DLTDS+I++LDDSPLDQKTKKK+T  S QPCK+ RT+ S S QAKGIK EK  KSLNFQY T+E+GG+L +                +PDPVY KQRAC G  AFRTSNPSFSVVIHPS++ S S++HIP EF KRYLKKSGEM+LRV DGR W VEY R+  +   KA F  +SWGQFA DN+ EVGDVCVFELMNENGNLLEV IHRK LLIEI
Sbjct:  111 KKMRIDSSNQHDQNSKLEVLSSGTSPDAQRNVKTKAFSCVQRLAANEKAHAVQIASAFESTENPVFMTVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLY-YLANKKPNAHLYGGWREFVEDNHLNVGDICVFELIKYPEILMKAQIYPGVKNASKARWQQSLGSIVSQVKNRILVSDAEPNCQQS--PSSSRESKDLTDSHIKTLDDSPLDQKTKKKLTRLSVQPCKMTRTSLSGSIQAKGIKHEK-GKSLNFQYSTQELGGDLFWK-------EVRCSEMSEPDPVYQKQRACTGGGAFRTSNPSFSVVIHPSHVRSCSTVHIPEEFGKRYLKKSGEMMLRVADGRSWNVEYERRGRSTSRKAVFEGKSWGQFAMDNEFEVGDVCVFELMNENGNLLEVVIHRKLLLIEI 525          

HSP 2 Score: 81.2629 bits (199), Expect = 1.558e-12
Identity = 65/176 (36.93%), Postives = 80/176 (45.45%), Query Frame = 3
Query: 1002 CSMFTSKTPHFFKVILQETITHG--RLGIPRNFVRKYGNQLSS------------HVKLEV-----PN------------------GAICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSE---LKDSKLKTQKNIDFQNSTKE 1409
             S F S     F  ++Q +   G  R+ IP +F RK+     S            H KL       PN                  G ICVFELI+ PEILMK QIYP  KNAS A   Q+  SI SQ++   LVS  EP+CQQ+  P SS E   L DS +KT  +      TK+
Sbjct:  165 ASAFESTENPVFMTVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLYYLANKKPNAHLYGGWREFVEDNHLNVGDICVFELIKYPEILMKAQIYPGVKNASKARWQQSLGSIVSQVKNRILVSDAEPNCQQS--PSSSRESKDLTDSHIKTLDDSPLDQKTKK 338          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0B0PB32_GOSAR (B3 domain-containing transcription factor VRN1-like protein OS=Gossypium arboreum GN=F383_28292 PE=4 SV=1)

HSP 1 Score: 591.267 bits (1523), Expect = 0.000e+0
Identity = 304/403 (75.43%), Postives = 337/403 (83.62%), Query Frame = 1
Query: 1570 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVF 2778
            KKMRI+S NQHGQNSKL+VLSSG S DAQR+V T+A SCVQRL AIEKAHAVQIASAFESTENP+FMIVM+PSYV G CRMFIPS+F RKFLT++K NLTLCNSTGKTWHAK + +P NKKPNAHL GGW EFVEDNHLNVGDICVFELIKHPEILMKV IYPVVKNASKA G QALGSIVSRVKTRSLVSDA+ +CQQS    S  +  DLTDS+I++L DSPLDQKTKKK+T  S QPCK+ RT+ S S QAKGIK EK  KSLNFQY T+E+GG LK S + D  R+S ARRC KPDPVY KQRAC G  AFRTSNPSFSVVIHPS+IGS S++HIP EF KRYLKK+GEM+LRV DGR W VEY R  +NKG KA FG +SWGQFA DN+LEVGD+  F
Sbjct:  327 KKMRIDSSNQHGQNSKLKVLSSGTSPDAQRTVKTKAFSCVQRLAAIEKAHAVQIASAFESTENPIFMIVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLY-HPANKKPNAHLCGGWREFVEDNHLNVGDICVFELIKHPEILMKVQIYPVVKNASKASGQQALGSIVSRVKTRSLVSDAEPNCQQSPSSSSESK--DLTDSHIKTLHDSPLDQKTKKKLTRSSAQPCKMTRTSLSGSIQAKGIKHEK-GKSLNFQYSTEELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKQRACTGGGAFRTSNPSFSVVIHPSHIGSCSTVHIPEEFGKRYLKKNGEMMLRVADGRSWNVEYERIGTNKGRKAGFGGKSWGQFAMDNELEVGDLLEF 725          

HSP 2 Score: 119.013 bits (297), Expect = 0.000e+0
Identity = 66/116 (56.90%), Postives = 79/116 (68.10%), Query Frame = 3
Query: 1224 NASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSELKDSKL-KTQKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQPLTPTEKQRATDIASWSSLRL 1568
            ++S+  R  A  SI +   T SLVS T    Q+ RCP  S+ELKDSK  K +K +D Q S K+L+ EF C AK+DNGGVSG  GCLKPDL+ + QPL PTEKQRA DI SWSS RL
Sbjct:  195 SSSSTGRVDAQRSIGNTDGTRSLVSDTNSSSQE-RCPSGSTELKDSKFQKRKKRVDSQYSKKDLRDEFICSAKHDNGGVSGACGCLKPDLIGRTQPLAPTEKQRAADIVSWSSSRL 309          

HSP 3 Score: 100.908 bits (250), Expect = 2.238e-18
Identity = 84/248 (33.87%), Postives = 106/248 (42.74%), Query Frame = 3
Query: 1002 CSMFTSKTPHFFKVILQETITHG--RLGIPRNFVRKYGNQLSS------------HVKLEVPN-----------------------GAICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSS-ELKDSKLKT------------------------------------------QKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQ 1505
             S F S     F +++Q +   G  R+ IP +F RK+     S            H KL  P                        G ICVFELI+ PEILMKVQIYP  KNAS A   QA  SI S+++T SLVS  EP+CQQ+    S S +L DS +KT                                           K+++FQ ST+EL G  +  AK D+G  SG   CLKPD V + Q
Sbjct:  381 ASAFESTENPIFMIVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLYHPANKKPNAHLCGGWREFVEDNHLNVGDICVFELIKHPEILMKVQIYPVVKNASKASGQQALGSIVSRVKTRSLVSDAEPNCQQSPSSSSESKDLTDSHIKTLHDSPLDQKTKKKLTRSSAQPCKMTRTSLSGSIQAKGIKHEKGKSLNFQYSTEELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKQ 628          

HSP 4 Score: 95.1301 bits (235), Expect = 1.206e-16
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 3
Query: 1005 SMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIRQPE 1187
            +MFTSKTPHFFKVILQET+  G LGIPR FVRKYGNQLSS VKLEVP+GAI   EL +  E
Sbjct:   11 TMFTSKTPHFFKVILQETLRDGILGIPRKFVRKYGNQLSSPVKLEVPSGAIWQVELAKTDE 71          

HSP 5 Score: 67.781 bits (164), Expect = 3.896e-8
Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 1
Query: 2482 KQRACVGASAFR-TSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLK-KSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIH 2823
            K  A   ASAF  T NP F +V+ PSY+  +  + IP +F +++L      + L    G+ W  +    A+ K      G   W +F +DN L VGD+CVFEL+     L++V I+
Sbjct:  374 KAHAVQIASAFESTENPIFMIVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLYHPANKKPNAHLCGG--WREFVEDNHLNVGDICVFELIKHPEILMKVQIY 487          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2SWF9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071400 PE=4 SV=1)

HSP 1 Score: 486.878 bits (1252), Expect = 5.008e-161
Identity = 252/270 (93.33%), Postives = 256/270 (94.81%), Query Frame = 1
Query: 2038 MKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEI 2847
            MKV  YPVVKNASKACG QALGSIVSRVKTRSLVSDAKRSCQQSAR PS REFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKL RTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELK SV+ND  RRSSARR PKPDPVYGKQRACVGASAFRTSNPSFSVVI PSYIGSSS+LHIPVEFVKRYLKKSGEMVLRV DGRIW+VEYRR ASNKG KAKFGSRSWGQFAKDNQLEVGDVC+FELMNENGNLLEVAIHRKHLLIEI
Sbjct:    1 MKVQTYPVVKNASKACGTQALGSIVSRVKTRSLVSDAKRSCQQSARLPSCREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKL-RTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKCSVKNDSGRRSSARRRPKPDPVYGKQRACVGASAFRTSNPSFSVVIQPSYIGSSSALHIPVEFVKRYLKKSGEMVLRVADGRIWVVEYRRTASNKGRKAKFGSRSWGQFAKDNQLEVGDVCLFELMNENGNLLEVAIHRKHLLIEI 269          

HSP 2 Score: 72.4034 bits (176), Expect = 1.829e-10
Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 1711 KAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYG-GWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055
            K  A   ASAF  T NP F +V++PSY+     + IP  F +++L      + L  + G+ W  ++ R   NK   A      W +F +DN L VGD+C+FEL+     L++V I+
Sbjct:  148 KQRACVGASAFR-TSNPSFSVVIQPSYIGSSSALHIPVEFVKRYLKK-SGEMVLRVADGRIWVVEYRRTASNKGRKAKFGSRSWGQFAKDNQLEVGDVCLFELMNENGNLLEVAIH 261          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2TYV0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071500 PE=4 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 5.479e-114
Identity = 196/316 (62.03%), Postives = 222/316 (70.25%), Query Frame = 1
Query: 1891 TWHA----KFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            TW A    K++  P+NK  NA+LYGGW EFVEDNHLNVGD+CVFELIK PEILMKV+I  +V+N SKAC   A GSI SRV TRSLVSDA+ +CQQS  P SS E  DLTDSYIE+LDDSPLDQ+TKK +T  S QPC                                    ELKYS  +D  R S A+RC KPDPVY KQRAC+G  AFRTSN SFSVVIHPSY+GS S+LHIP EF KRYLK SGEM+LR+ DG+ W VEY R+A NKG KA+F S SWGQF  DN+LEVGDVCVFEL+NENGNLLEVA  +
Sbjct:   49 TWLAIFQHKYYSNPKNKDRNAYLYGGWREFVEDNHLNVGDVCVFELIKLPEILMKVVINLLVENTSKACDSLAFGSIDSRVNTRSLVSDAEPTCQQSLCPSSSGESKDLTDSYIETLDDSPLDQETKK-LTPRSIQPC------------------------------------ELKYSAEDDSGRTSGAQRCLKPDPVYQKQRACIGGGAFRTSNSSFSVVIHPSYVGSCSALHIPKEFGKRYLKNSGEMMLRIEDGKTWTVEYERRARNKGRKAEFKSNSWGQFTIDNELEVGDVCVFELINENGNLLEVAFRK 327          

HSP 2 Score: 92.4337 bits (228), Expect = 1.094e-16
Identity = 59/128 (46.09%), Postives = 74/128 (57.81%), Query Frame = 3
Query: 1149 GAICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSE---LKDSKLKTQKNIDFQNSTKELK------GEFRCLAKNDNGGVSGDWGCLKPDLVSKMQ 1505
            G +CVFELI+ PEILMKV I    +N S AC S A  SI S++ T SLVS  EP CQQ+ CP SS E   L DS ++T  +      TK+L        E +  A++D+G  SG   CLKPD V + Q
Sbjct:   87 GDVCVFELIKLPEILMKVVINLLVENTSKACDSLAFGSIDSRVNTRSLVSDAEPTCQQSLCPSSSGESKDLTDSYIETLDDSPLDQETKKLTPRSIQPCELKYSAEDDSGRTSGAQRCLKPDPVYQKQ 214          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A061DMT4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000519 PE=4 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 8.276e-101
Identity = 204/438 (46.58%), Postives = 274/438 (62.56%), Query Frame = 1
Query: 1570 KKMRINSPNQHGQNSKLEV-----LSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIK-HPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREF-IDLTD------SYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPD------PVYGKQR--ACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAI 2820
            K+M+++SPN+ G + K ++     +  G+S   QRS   E L  V  LTA EK  A+Q AS F+ T+NP FM+VM+PSYV    RM +P  F RK+  M + N+ L  S+G++W AK++  P    P A L  GW EF + N L VGD+CVFEL +  PEIL+KV+I       + A  P A GSI  RVK R L SD + +C Q+   P+ RE+ +  T+      + IE LDD PL+Q TKKK+  P FQPC++M+TNPS   Q KGI+L K+K SL+FQY T E+GGE K+S +++    S A+RC KPD      P+   ++  A   A AF+++NPSF+VV+ PSY+    SL IP +FVKRY KK+GE+ LRV DGR WIV+Y  +   +  K KF SRSW  F  DN L+VGDVCVFEL+  NGN  +V I
Sbjct:  154 KEMKVDSPNEIGTHLKSKISAPAAMGGGVS--GQRSPQIEVLETVGHLTADEKTKALQKASGFK-TKNPFFMVVMQPSYVSFSYRMSVPDGFARKYFKMTQGNVILRISSGQSWPAKYYCRPNIDNPRAQLRDGWQEFAKHNALEVGDVCVFELTRTSPEILLKVVICKRFFEDAIAARPLAGGSIAYRVKKRRLFSDTETNCLQNQ--PAIREYRVPKTEQNENIHTSIEILDDFPLNQITKKKLPFPGFQPCRMMKTNPS---QVKGIELGKQKTSLDFQYSTNELGGEFKFSGKDESVGMSGAQRCSKPDFLGRMQPLTTTEKKIALKRAMAFKSANPSFTVVMQPSYVLPGGSLSIPSQFVKRYFKKNGEVTLRVSDGRTWIVDYNGEGDGQCPKGKFRSRSWRAFVLDNNLKVGDVCVFELIKANGNSFDVVI 583          

HSP 2 Score: 162.925 bits (411), Expect = 9.368e-38
Identity = 135/410 (32.93%), Postives = 192/410 (46.83%), Query Frame = 1
Query: 1645 SDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYG-GWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTN---------PSE---------SNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVG--------ASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKS--GEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELM 2787
            S AQR    + L  +Q LT  EK  A++ A AF+S  NP F +VM+PSYVL    + IPS F +++       +TL  S G+TW   +    + + P        W  FV DN+L VGD+CVFELIK       V+I+P    AS  C    L              D++  C+++             +  IE L+ +   QKT++K +    +P K+M+ N          SE          N+A GIKLE+ K S +     +EVG  LK               CP+   +   Q+            A AF + NP F VVI PS+I  +  + IP  F ++Y  K+  GE VL + DG+ W V+Y R+  +   + +F S  W +FA DN L VGDVCVFEL+
Sbjct:  449 SGAQRCSKPDFLGRMQPLTTTEKKIALKRAMAFKSA-NPSFTVVMQPSYVLPGGSLSIPSQFVKRYFKK-NGEVTLRVSDGRTWIVDYNGEGDGQCPKGKFRSRSWRAFVLDNNLKVGDVCVFELIKANGNSFDVVIFPDANIAS--CSSSKL--------------DSRYQCKEAE-----------DEGSIEILECTAPCQKTREKSSIQCPRPQKMMKINMINKTEKILESEYIDPRFRPFCNKACGIKLEEPKGSTSSSCCKQEVG--LK-PATRTGTSTEKGWECPEQAEILRSQKLTAKVKAKTLRIAKAFNSKNPFFLVVIQPSHISRNYKMCIPSNFARKYFTKTHGGETVLCLSDGKSWSVKYYRRGDDGNPRGQF-SGGWKKFALDNNLVVGDVCVFELL 825          

HSP 3 Score: 111.309 bits (277), Expect = 1.513e-21
Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 1
Query: 1690 QRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLT-MYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVL 2049
            Q+LTA  KA  ++IA AF S +NP F++V++PS++    +M IPSNF RK+ T  +     LC S GK+W  K++R  ++  P     GGW +F  DN+L VGD+CVFEL+K  +I  KVL
Sbjct:  716 QKLTAKVKAKTLRIAKAFNS-KNPFFLVVIQPSHISRNYKMCIPSNFARKYFTKTHGGETVLCLSDGKSWSVKYYRRGDDGNPRGQFSGGWKKFALDNNLVVGDVCVFELLKGADISFKVL 835          

HSP 4 Score: 90.1225 bits (222), Expect = 5.420e-15
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 3
Query:  990 TEDDCSMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIR 1178
            ++++ SMFTSKTPHFFKVIL ET   G+LGIP NFVRKYG QLSS ++LEVP+GA+   EL +
Sbjct:    8 SDNEHSMFTSKTPHFFKVILDETFRDGKLGIPTNFVRKYGRQLSSPIRLEVPSGAVWQVELTK 70          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2T1X7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071600 PE=4 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 1.437e-78
Identity = 131/157 (83.44%), Postives = 140/157 (89.17%), Query Frame = 1
Query: 1576 MRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKV 2046
            MRI++ NQH QNSKLEVLSSG S DAQRSV T+A SCVQRL AIEKAHAVQIASAFESTENPVFMIVM+PSYV G  RMFIPS+F RKFLT++K NLTLCNSTGKTWHAK + YP NKKPNAHLYGGW EFVEDNHLNVGDICVFELIK+PEILMK 
Sbjct:    1 MRIDASNQHEQNSKLEVLSSGTSPDAQRSVKTKAFSCVQRLAAIEKAHAVQIASAFESTENPVFMIVMQPSYVRG--RMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLY-YPANKKPNAHLYGGWREFVEDNHLNVGDICVFELIKYPEILMKT 154          

HSP 2 Score: 261.536 bits (667), Expect = 6.731e-75
Identity = 137/193 (70.98%), Postives = 154/193 (79.79%), Query Frame = 1
Query: 2269 TSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEI 2847
            T  S Q CK+ RT+ S S QAKGIK EK  KSLNFQY T+E+GG LK S + D  R+S ARRC KPDPVY K+RAC G  AFRTSNPSFSVVIHPS++GS S++HIP EF KRYLKKSGEM+LRV DGR W VEY R+  +KG KA FG +SWGQFA DN+LEVGDVCVFELMNENGNLLEV IHRK LL+EI
Sbjct:  154 TRSSVQHCKMTRTSLSGSIQAKGIKHEK-GKSLNFQYSTEELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKRRACTGGGAFRTSNPSFSVVIHPSHVGSCSTVHIPEEFGKRYLKKSGEMMLRVADGRSWNVEYERRGRSKGRKAVFGGKSWGQFAMDNELEVGDVCVFELMNENGNLLEVVIHRKLLLVEI 345          

HSP 3 Score: 70.4774 bits (171), Expect = 1.487e-9
Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 1
Query: 1621 EVLSSGISSDAQ--RSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGG--WCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055
            E L  G+ + A+      + A  C++     +K  A     AF  T NP F +V+ PS+V     + IP  F +++L      + L  + G++W+ ++ R   +K   A ++GG  W +F  DN L VGD+CVFEL+     L++V+I+
Sbjct:  192 EELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKRRACTGGGAFR-TSNPSFSVVIHPSHVGSCSTVHIPEEFGKRYLKK-SGEMMLRVADGRSWNVEYERRGRSKGRKA-VFGGKSWGQFAMDNELEVGDVCVFELMNENGNLLEVVIH 337          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2PQB5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071600 PE=4 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 5.932e-78
Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 1
Query: 1570 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKV 2046
            KKMRI++ NQH QNSKLEVLSSG S DAQRSV T+A SCVQRL AIEKAHAVQIASAFESTENPVFMIVM+PSYV G  RMFIPS+F RKFLT++K NLTLCNSTGKTWHAK + YP NKKPNAHLYGGW EFVEDNHLNVGDICVFELIK+PEILMK 
Sbjct:  134 KKMRIDASNQHEQNSKLEVLSSGTSPDAQRSVKTKAFSCVQRLAAIEKAHAVQIASAFESTENPVFMIVMQPSYVRG--RMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLY-YPANKKPNAHLYGGWREFVEDNHLNVGDICVFELIKYPEILMKT 289          

HSP 2 Score: 260.381 bits (664), Expect = 6.243e-73
Identity = 137/193 (70.98%), Postives = 154/193 (79.79%), Query Frame = 1
Query: 2269 TSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEI 2847
            T  S Q CK+ RT+ S S QAKGIK EK  KSLNFQY T+E+GG LK S + D  R+S ARRC KPDPVY K+RAC G  AFRTSNPSFSVVIHPS++GS S++HIP EF KRYLKKSGEM+LRV DGR W VEY R+  +KG KA FG +SWGQFA DN+LEVGDVCVFELMNENGNLLEV IHRK LL+EI
Sbjct:  289 TRSSVQHCKMTRTSLSGSIQAKGIKHEK-GKSLNFQYSTEELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKRRACTGGGAFRTSNPSFSVVIHPSHVGSCSTVHIPEEFGKRYLKKSGEMMLRVADGRSWNVEYERRGRSKGRKAVFGGKSWGQFAMDNELEVGDVCVFELMNENGNLLEVVIHRKLLLVEI 480          

HSP 3 Score: 93.2041 bits (230), Expect = 2.245e-16
Identity = 46/60 (76.67%), Postives = 49/60 (81.67%), Query Frame = 3
Query: 1008 MFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIRQPE 1187
            MFTSKTPHFFKVILQET+  G LGIPR FVRKYGNQLSS VKLEVP+GAI   EL +  E
Sbjct:    1 MFTSKTPHFFKVILQETLRDGILGIPRKFVRKYGNQLSSPVKLEVPSGAIWQVELAKTDE 60          

HSP 4 Score: 70.0922 bits (170), Expect = 4.125e-9
Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 1
Query: 1621 EVLSSGISSDAQ--RSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGG--WCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055
            E L  G+ + A+      + A  C++     +K  A     AF  T NP F +V+ PS+V     + IP  F +++L      + L  + G++W+ ++ R   +K   A ++GG  W +F  DN L VGD+CVFEL+     L++V+I+
Sbjct:  327 EELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKRRACTGGGAFR-TSNPSFSVVIHPSHVGSCSTVHIPEEFGKRYLKK-SGEMMLRVADGRSWNVEYERRGRSKGRKA-VFGGKSWGQFAMDNELEVGDVCVFELMNENGNLLEVVIH 472          

HSP 5 Score: 69.3218 bits (168), Expect = 6.653e-9
Identity = 77/326 (23.62%), Postives = 123/326 (37.73%), Query Frame = 1
Query: 1816 IPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFR-TSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLK-KSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELM 2787
            IP  F RK+       + L   +G  W  +  +  E  +    L  GW EF E   L +G   VF    +      VLI+                                +S  ++  P +S E  D++             +K+K+K   P   P K MR + S  ++          ++   + L+     + + SV+           C +      K  A   ASAF  T NP F +V+ PSY+     + IP +F +++L      + L    G+ W  +    A+ K     +G   W +F +DN L VGD+CVFEL+
Sbjct:   25 IPRKFVRKYGNQLSSPVKLEVPSGAIWQVELAKTDERVR----LQNGWREFAEHYSLELGSFVVFRYEGNDHF--HVLIF-------------------------------DKSASETEYPHTSTEGNDVS-------------RKSKEKSHLPCPLPQKKMRIDASNQHE----------QNSKLEVLSSGTSPDAQRSVKTKAFS------CVQRLAAIEKAHAVQIASAFESTENPVFMIVMQPSYV--RGRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLYYPANKKPNAHLYGG--WREFVEDNHLNVGDICVFELI 280          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2RB72_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071300 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.253e-40
Identity = 124/393 (31.55%), Postives = 186/393 (47.33%), Query Frame = 1
Query: 1684 CVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYI-ESLDDSPLDQKTKKKMTSP------SFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKK-SGEMVLRVV-DGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNL--LEVAIHR 2826
            C+ R +T +EKA A+  AS F+S +NP F +VM+P Y++ +C + IP  F  + L   K    L  S G+TW  KF         +   +  W  F  DN+L VGD+CVFELI   E   KV I+     A+ +  PQA  +  S+V +++ +             P      D  + Y   S DD+   Q   K    P       F  C +   N S + Q   I  ++ ++ +     T+  G                    P+      K +A   AS F++ NP F+V + PSY+ +   L IP++F ++YL+  SG  +L +V DG+ W+ +Y R+A     +AK     W  FAKDN LE+GDVCVFE++N  G    L VAI++
Sbjct:  359 CLMRPMTPVEKARAILKASNFKS-KNPFFKVVMQPRYLILRCSLGIPYKFVNRHLDEEKEEAILRVSDGRTWVVKFTVKVFTGGQHKAEFSTWRAFARDNNLEVGDVCVFELINRHENSFKVSIFSAAPGANSSLSPQADDAEASQVASKNCLV------------PRIEADDDFGNCYAGNSTDDAIASQVASKDWLVPKIEADDDFGKCHV--GNSSSAAQFPAIGYQETEEEVQPTISTRPRG--------------------PQRLQAGEKAKALQRASGFKSQNPFFTVAMQPSYVSNGYRLAIPLDFSRKYLRNGSGNAILSMVGDGKTWLTKYHREAKGTNPRAKLID-GWKTFAKDNNLEIGDVCVFEMINSEGYQLSLNVAIYK 715          

HSP 2 Score: 116.316 bits (290), Expect = 2.850e-23
Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 1705 IEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRY-PENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076
            IE   A+Q AS+F S ENP F+++M+PSY+    +M IP  FT KFL     +LTLC S GKTW  +++RY   NK   A ++ GW +F+ DN+L  GD+CVFELI   E ++KV+IY V ++ S
Sbjct:  205 IEYDKALQRASSFRS-ENPFFLVIMQPSYINPGRKMCIPKEFTMKFLKENLGDLTLCTSEGKTWSTQYWRYISRNKYTKAIIHIGWRQFMLDNNLEAGDVCVFELISQTESMLKVIIYRVRQDTS 328          

HSP 3 Score: 96.2857 bits (238), Expect = 5.087e-17
Identity = 94/369 (25.47%), Postives = 160/369 (43.36%), Query Frame = 1
Query: 1747 STENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTS-----PSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYG---KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            +++ P F  ++  + +  K ++ IP  F RK+      ++ L   +G TWHA+  +             GW  F E   L  G   VF    + + L  VLI+ +  +AS+   P            +S + D     Q   +  +     D  D    +L ++P  ++T+KK        P  +P K ++T   + N+      + E +S +   +  +V                     P+ +  +G     +A   AS+FR+ NP F V++ PSYI     + IP EF  ++LK++ G++ L   +G+ W  +Y R  S            W QF  DN LE GDVCVFEL+++  ++L+V I+R
Sbjct:    3 ASKTPHFFKIILEATIRDK-KLGIPRKFVRKYGKGLSSSVLLTVPSGDTWHAQLTK----SDGVVWFQNGWQAFAEYYSLQYGHFLVFRYEGNGKFL--VLIFDM--SASEIEYP-----------CKSHIEDHNSDDQVCLKLVNKEAKDDTCDG---TLYETPPCKETRKKKKKKRSRPPCSKPRKKLKTTQKDKNEK-----DWEDESTSEDDMQTKV---------------------PRDEHAFGVIEYDKALQRASSFRSENPFFLVIMQPSYINPGRKMCIPKEFTMKFLKENLGDLTLCTSEGKTWSTQYWRYISRNKYTKAIIHIGWRQFMLDNNLEAGDVCVFELISQTESMLKVIIYR 322          

HSP 4 Score: 72.0182 bits (175), Expect = 1.715e-9
Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 3
Query: 1008 MFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNG 1151
            MF SKTPHFFK+IL+ TI   +LGIPR FVRKYG  LSS V L VP+G
Sbjct:    1 MFASKTPHFFKIILEATIRDKKLGIPRKFVRKYGKGLSSSVLLTVPSG 48          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2SWH2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071300 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.295e-40
Identity = 124/393 (31.55%), Postives = 186/393 (47.33%), Query Frame = 1
Query: 1684 CVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYI-ESLDDSPLDQKTKKKMTSP------SFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKK-SGEMVLRVV-DGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNL--LEVAIHR 2826
            C+ R +T +EKA A+  AS F+S +NP F +VM+P Y++ +C + IP  F  + L   K    L  S G+TW  KF         +   +  W  F  DN+L VGD+CVFELI   E   KV I+     A+ +  PQA  +  S+V +++ +             P      D  + Y   S DD+   Q   K    P       F  C +   N S + Q   I  ++ ++ +     T+  G                    P+      K +A   AS F++ NP F+V + PSY+ +   L IP++F ++YL+  SG  +L +V DG+ W+ +Y R+A     +AK     W  FAKDN LE+GDVCVFE++N  G    L VAI++
Sbjct:  370 CLMRPMTPVEKARAILKASNFKS-KNPFFKVVMQPRYLILRCSLGIPYKFVNRHLDEEKEEAILRVSDGRTWVVKFTVKVFTGGQHKAEFSTWRAFARDNNLEVGDVCVFELINRHENSFKVSIFSAAPGANSSLSPQADDAEASQVASKNCLV------------PRIEADDDFGNCYAGNSTDDAIASQVASKDWLVPKIEADDDFGKCHV--GNSSSAAQFPAIGYQETEEEVQPTISTRPRG--------------------PQRLQAGEKAKALQRASGFKSQNPFFTVAMQPSYVSNGYRLAIPLDFSRKYLRNGSGNAILSMVGDGKTWLTKYHREAKGTNPRAKLID-GWKTFAKDNNLEIGDVCVFEMINSEGYQLSLNVAIYK 726          

HSP 2 Score: 116.316 bits (290), Expect = 2.929e-23
Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 1705 IEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRY-PENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076
            IE   A+Q AS+F S ENP F+++M+PSY+    +M IP  FT KFL     +LTLC S GKTW  +++RY   NK   A ++ GW +F+ DN+L  GD+CVFELI   E ++KV+IY V ++ S
Sbjct:  216 IEYDKALQRASSFRS-ENPFFLVIMQPSYINPGRKMCIPKEFTMKFLKENLGDLTLCTSEGKTWSTQYWRYISRNKYTKAIIHIGWRQFMLDNNLEAGDVCVFELISQTESMLKVIIYRVRQDTS 339          

HSP 3 Score: 96.2857 bits (238), Expect = 5.460e-17
Identity = 95/364 (26.10%), Postives = 152/364 (41.76%), Query Frame = 1
Query: 1747 STENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYG---KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            +++ P F  ++  + +  K ++ IP  F RK+      ++ L   +G TWHA+  +             GW  F E   L  G   VF    + + L  VLI+ +  +AS+   P            +S + D     Q   +  +     D  D  +   +  P  +  KKK    S  PC   R            KL+  +K  N +    E   E                + P+ +  +G     +A   AS+FR+ NP F V++ PSYI     + IP EF  ++LK++ G++ L   +G+ W  +Y R  S            W QF  DN LE GDVCVFEL+++  ++L+V I+R
Sbjct:   14 ASKTPHFFKIILEATIRDK-KLGIPRKFVRKYGKGLSSSVLLTVPSGDTWHAQLTK----SDGVVWFQNGWQAFAEYYSLQYGHFLVFRYEGNGKFL--VLIFDM--SASEIEYP-----------CKSHIEDHNSDDQVCLKLVNKEAKDDTCDGTL--YETPPCKETRKKKKKKRSRPPCSKPRK-----------KLKTTQKDKNEKDWEDESTSE-----------DDMQTKVPRDEHAFGVIEYDKALQRASSFRSENPFFLVIMQPSYINPGRKMCIPKEFTMKFLKENLGDLTLCTSEGKTWSTQYWRYISRNKYTKAIIHIGWRQFMLDNNLEAGDVCVFELISQTESMLKVIIYR 333          

HSP 4 Score: 73.559 bits (179), Expect = 6.047e-10
Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 3
Query: 1005 SMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNG 1151
            SMF SKTPHFFK+IL+ TI   +LGIPR FVRKYG  LSS V L VP+G
Sbjct:   11 SMFASKTPHFFKIILEATIRDKKLGIPRKFVRKYGKGLSSSVLLTVPSG 59          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
REM19_ARATH2.335e-1533.33B3 domain-containing protein REM19 OS=Arabidopsis ... [more]
VRN1_ARATH1.272e-1433.54B3 domain-containing transcription factor VRN1 OS=... [more]
Y1176_ORYSJ1.497e-1236.43B3 domain-containing protein Os11g0197600 OS=Oryza... [more]
Y1235_ORYSJ1.451e-832.82B3 domain-containing protein Os01g0723500 OS=Oryza... [more]
Y6112_ORYSJ1.485e-835.23B3 domain-containing protein Os06g0112300 OS=Oryza... [more]
Y3216_ORYSJ6.149e-833.08Putative B3 domain-containing protein Os03g0621600... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0P1A8_GOSAR2.907e-5898.83Uncharacterized protein OS=Gossypium arboreum GN=F... [more]
A0A0D2VJR0_GOSRA1.558e-1272.54Uncharacterized protein (Fragment) OS=Gossypium ra... [more]
A0A0B0PB32_GOSAR2.238e-1875.43B3 domain-containing transcription factor VRN1-lik... [more]
A0A0D2SWF9_GOSRA5.008e-16193.33Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2TYV0_GOSRA5.479e-11462.03Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061DMT4_THECC8.276e-10146.58Uncharacterized protein OS=Theobroma cacao GN=TCM_... [more]
A0A0D2T1X7_GOSRA1.437e-7883.44Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2PQB5_GOSRA5.932e-7883.65Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2RB72_GOSRA1.253e-4031.55Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2SWH2_GOSRA1.295e-4031.55Uncharacterized protein OS=Gossypium raimondii GN=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 64..163
e-value: 2.4E-13
score: 60.3
coord: 320..419
e-value: 1.1E-20
score: 84.7
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 321..418
e-value: 6.6E-17
score: 61.1
coord: 64..152
e-value: 2.0E-18
score: 66.0
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 320..419
score: 13.916
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 64..161
score: 13.578
IPR015300DNA-binding pseudobarrel domainGENE3D2.40.330.10coord: 58..158
e-value: 2.2E-21
score: 75.0
coord: 311..418
e-value: 7.7E-21
score: 73.2
IPR015300DNA-binding pseudobarrel domainSUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 315..413
IPR015300DNA-binding pseudobarrel domainSUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 59..161
NoneNo IPR availablePANTHERPTHR31920:SF16SUBFAMILY NOT NAMEDcoord: 2..254
NoneNo IPR availablePANTHERPTHR31920:SF16SUBFAMILY NOT NAMEDcoord: 282..417
NoneNo IPR availablePANTHERPTHR31920FAMILY NOT NAMEDcoord: 282..417
coord: 2..254

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0095074 ID=g.barbadense_cottongen_reftransV1_0095074; Name=g.barbadense_cottongen_reftransV1_0095074; organism=Gossypium barbadense; type=contig; length=3001bp
GGAATCGAATATCTTGGATTCGAAAAGCTAACATTTTTCCCCATTCAGGT
ATGCTATTGATTTCCTTATACCATTATGTATGAAGCCTGTGCTTCTCTGA
GTCTTGGATTCATCAGTTTTCTTCAAGTATCTCTAAACCGTGTCTAACGC
ATATCTGAACAAGAGTATTAGGATACCTAAATTCCGGATCGAAGAAATAT
ATAGAAGGTCAATGAAAATAATTGATCTGGACATAATGTATTTGGTTGGG
TCGCTTCGGTTTTCTATGGCATTTGATTTCGATCGATTTGGCTATGGAAT
TCAACTGGTTTTGGTTTGACTTGAAAAAATTAGATTCCAAAACCAAATCA
AACAGAACTGATACCATTTGTAATTGAACAACCTTGAGTGCAAATTCCAT
TACATGGAAATGGCTTTACCTATGGAAATGGCTTTACCTAAAATTATGGT
GTCTTGTGTGCCAAAACACATGATTCAATTAAAAGATTTTTCCTGTATCA
GAGATTTCATTTTTTCTGGGATTTGTGTACTATTTTCAGGAAAAGCTATC
ACAGCATTTCCTATAGAATCTCTTTCCCAGCTTCTAAAAGTGGTAAAAGT
TGATTTGGTTTAAAGCCTCCCCAGGCCCCTACATTAAACCATGAAAGAAC
CCAGAGTTTGTTTTCTTAAGGTATGGATTTATGTTCAGTCATTGCTTCAT
AAGCATGGAGTATATGGTGAAAATGTTTGACAAATGTCAGCATTTTTACT
GTCATACAGCAGCTTGCTTGTCCTTGGTCAACAACTTGGAAACAGGAGTA
TTTTGGGGCTTACATTATCCTATTAGCCCCTAACAAGAGAAGGTGAAAGT
GACCCGGCAGCTTTAGCAAAAGCTAGCAGAAAGTCAGTACTGGAGTGGAG
CTAGCTCCTCAACTGTTTGTCTATTTGTTTATGTAGGCTACCATTGAACA
TACTCCTCAACAGCCTTCCACCATGACTTCTCACCTTGTACAGAAGATGA
CTGTTCCATGTTTACTTCCAAAACTCCCCATTTTTTCAAAGTCATTCTTC
AGGAAACTATAACTCATGGGAGACTTGGGATTCCTAGAAATTTTGTGAGA
AAATATGGAAACCAGCTCTCAAGCCATGTTAAGCTTGAGGTCCCCAATGG
TGCAATATGTGTCTTTGAGTTAATTAGGCAACCTGAAATCTTAATGAAAG
TGCAGATCTACCCGGCTGCCAAAAATGCAAGCAATGCCTGCAGATCACAG
GCTGATAATAGCATTGCCAGTCAACTTAGAACCGGGAGCTTGGTCAGTGT
TACTGAACCTGATTGTCAACAAACTCGATGCCCCTACAGCTCCAGTGAAC
TTAAAGACTCAAAGCTCAAAACACAAAAGAACATCGATTTCCAAAATTCA
ACAAAAGAACTTAAGGGTGAATTCAGATGTTTAGCAAAAAATGATAATGG
AGGGGTTTCAGGTGATTGGGGATGTCTGAAACCTGACCTTGTGAGCAAGA
TGCAACCATTGACTCCAACTGAGAAACAAAGAGCTACTGATATTGCAAGT
TGGTCTTCCTTAAGATTAGAAGAAAATGAGAATCAATTCTCCTAATCAAC
ATGGACAAAATTCAAAGTTAGAGGTTTTATCTTCAGGCATTAGCTCTGAT
GCTCAGAGAAGTGTGACAACTGAGGCTTTAAGTTGTGTGCAACGGCTGAC
AGCCATTGAAAAGGCGCATGCTGTTCAGATAGCTAGTGCTTTTGAAAGTA
CTGAAAACCCAGTTTTTATGATAGTCATGCGACCATCATACGTTCTTGGT
AAATGCAGAATGTTTATACCATCGAACTTCACAAGGAAATTTTTGACAAT
GTACAAGTGTAATCTGACCTTGTGCAATTCCACTGGGAAAACTTGGCATG
CCAAGTTCTTTAGATATCCAGAAAATAAAAAACCAAATGCACACCTCTAC
GGTGGGTGGTGTGAATTTGTGGAAGATAATCATCTTAATGTTGGTGACAT
TTGTGTTTTTGAGCTAATTAAGCATCCTGAAATCTTAATGAAAGTGCTAA
TCTATCCGGTTGTCAAAAATGCAAGCAAGGCCTGCGGGCCACAAGCTCTC
GGGAGCATAGTCAGTCGAGTTAAAACTAGGAGCTTGGTCAGTGATGCTAA
ACGTAGTTGTCAACAAAGTGCACGTCCCCCCAGCTCCAGAGAATTTATAG
ACCTAACAGACTCGTACATTGAGAGCTTGGATGACTCTCCACTAGACCAG
AAAACGAAGAAGAAAATGACATCTCCAAGTTTTCAGCCTTGTAAGTTGAT
GAGAACCAATCCAAGTGAAAGCAATCAAGCTAAGGGGATTAAGCTGGAGA
AAGAAAAGAAGAGCTTGAATTTCCAATATTTAACAAAAGAAGTTGGAGGT
GAACTCAAATATTCTGTAAGGAATGATAGGGAAAGGAGGTCAAGTGCACG
GAGATGTCCGAAACCTGATCCTGTATACGGGAAACAAAGAGCTTGCGTAG
GAGCTAGTGCTTTCAGAACTTCAAATCCCTCTTTCAGTGTTGTGATACAT
CCGTCATACATTGGTTCTTCTAGTTCTCTGCATATACCGGTGGAATTTGT
CAAGAGATATTTGAAGAAAAGCGGAGAAATGGTGCTGAGAGTTGTAGATG
GGAGGATTTGGATAGTTGAGTACAGAAGAAAAGCAAGTAATAAAGGTGGA
AAAGCAAAGTTTGGGAGTAGGAGTTGGGGACAGTTTGCGAAAGACAATCA
ACTGGAGGTGGGAGACGTTTGTGTGTTTGAGCTGATGAATGAAAATGGAA
ACTTGTTGGAAGTCGCCATTCATCGCAAGCATTTACTCATCGAAATTGCT
TAACTGAAAAAACACAAGTCAAAGTATTTTAATCCAAATTGGAGCTGTTT
GATGAAGTTGACAACCAACATTGTATTTGATGGTTTGTTCTTGGAGCTAT
TTTAGATTTATTATGCTTATTATTATTTACTAATTTTTAATATCGCATAC
A
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding