g.barbadense_cottongen_reftransV1_0094108, g.barbadense_cottongen_reftransV1_0094108 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094108
Unique Nameg.barbadense_cottongen_reftransV1_0094108
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1949
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy Swiss-Prot
Match: CDI_ARATH (Protein CDI OS=Arabidopsis thaliana GN=CDI PE=2 SV=1)

HSP 1 Score: 438.728 bits (1127), Expect = 8.987e-149
Identity = 202/255 (79.22%), Postives = 228/255 (89.41%), Query Frame = 3 
Query:  816 MTLANGEAHQVT-NNGDLSK-PFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNA 1574
            MT++NG+    T NNG   K PF+IFVGYDPREDLAY+VC HSI KRSS+PVEITPI+QSDLR+KGLYWRER +LESTEFSFSRFLTP+L++Y GWA+F+DCDFLYLADIKEL +LIDDKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK L+PE+VN QTGAFLHRFQWLED+EIGSIP +WNFLEGHN+VVE D  T PKA+HYTRGGPWF+AWK+CEFADLWLNEM +Y +E K  A
Sbjct:    1 MTISNGDVKSETCNNGSSEKKPFRIFVGYDPREDLAYQVCHHSITKRSSIPVEITPIIQSDLRKKGLYWRERGQLESTEFSFSRFLTPHLSDYQGWAMFVDCDFLYLADIKELTDLIDDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKTLSPEIVNTQTGAFLHRFQWLEDEEIGSIPFVWNFLEGHNRVVEKDPTTQPKAVHYTRGGPWFDAWKDCEFADLWLNEMEEYNKENKKEA 255
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: A0A0D2S600_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G255800 PE=4 SV=1)

HSP 1 Score: 533.487 bits (1373), Expect = 0.000e+0
Identity = 253/254 (99.61%), Postives = 254/254 (100.00%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNAS 1577
            MTLANGEA+QVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNAS
Sbjct:    1 MTLANGEAYQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNAS 254
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: A0A061F0N1_THECC (Nucleotide-diphospho-sugar transferases superfamily protein OS=Theobroma cacao GN=TCM_025564 PE=4 SV=1)

HSP 1 Score: 493.041 bits (1268), Expect = 3.163e-168
Identity = 225/253 (88.93%), Postives = 243/253 (96.05%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNA 1574
            MTLANG AHQVT+NGD+SK FKIFVGYDPREDLAYEVC+HSILKRSS+PVEITPIVQSDLR+KGLYWRER +LESTEFSFSRFLTPYLANY+GWA+F+DCDFLYLADIKEL ELIDDKYAIMCVHHDY+PKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNKGLTPEVVN QTGAFLHRFQWLEDDEIGS+P +WNFLEGHNKVVENDS TFPKA+HYTRGGPWF+AWKNCEFADLWLNEM +Y+E+ K NA
Sbjct:    1 MTLANGNAHQVTSNGDVSKTFKIFVGYDPREDLAYEVCQHSILKRSSIPVEITPIVQSDLRKKGLYWRERGQLESTEFSFSRFLTPYLANYDGWAMFVDCDFLYLADIKELTELIDDKYAIMCVHHDYSPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKGLTPEVVNTQTGAFLHRFQWLEDDEIGSVPFVWNFLEGHNKVVENDSTTFPKAVHYTRGGPWFDAWKNCEFADLWLNEMQEYMEKNKFNA 253
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: A0A0D2MJU6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G058000 PE=4 SV=1)

HSP 1 Score: 466.848 bits (1200), Expect = 7.267e-158
Identity = 210/248 (84.68%), Postives = 232/248 (93.55%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEE 1559
            MT ANG A QVTNNGD+ KPFKIF+GYDPRED AYEVCRHSILKR+S+PVEITPIVQSDLR KGLYWR R++ ESTEFSF+RFLTPYLANY+GWA+F+DCDFLYLADIKEL ELI+DKYA+MCVHHDY PKE TKMDGAVQT+YPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWL+D+EIGS+P +WNFLEGHN+VVEND KTFPKAIHYTRGGPWFEAWK CEFADLWL EM +Y+++
Sbjct:    1 MTSANGNASQVTNNGDVRKPFKIFIGYDPREDQAYEVCRHSILKRTSIPVEITPIVQSDLRAKGLYWRSRDQFESTEFSFTRFLTPYLANYDGWAMFVDCDFLYLADIKELTELINDKYAVMCVHHDYFPKEKTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLDDNEIGSVPCVWNFLEGHNEVVENDPKTFPKAIHYTRGGPWFEAWKTCEFADLWLKEMQEYMKK 248
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: A0A0B0NVF3_GOSAR (Ribosome maturation factor rimM OS=Gossypium arboreum GN=F383_20856 PE=4 SV=1)

HSP 1 Score: 466.463 bits (1199), Expect = 9.225e-158
Identity = 210/248 (84.68%), Postives = 232/248 (93.55%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEE 1559
            MT ANG A QVTNN D+ KPFKIF+GYDPRED AYEVCRHSILKR+S+PVEITPIVQSDLR KGLYWR R++ ESTEFSF+RFLTPYLANY+GWA+F+DCDFLYLADIKEL ELI+DKYA+MCVHHDY+PKE TKMDGAVQT+YPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWL+D+EIGS+P +WNFLEGHNKVVEND KTFPKAIHYTRGGPWFEAWK CEFADLWL EM +Y+++
Sbjct:    1 MTSANGNASQVTNNDDVRKPFKIFIGYDPREDQAYEVCRHSILKRTSIPVEITPIVQSDLRAKGLYWRSRDQFESTEFSFTRFLTPYLANYDGWAMFVDCDFLYLADIKELTELINDKYAVMCVHHDYSPKEKTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLDDNEIGSVPCVWNFLEGHNKVVENDPKTFPKAIHYTRGGPWFEAWKTCEFADLWLKEMEEYMKK 248
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: M5VXU2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010282mg PE=4 SV=1)

HSP 1 Score: 450.669 bits (1158), Expect = 1.590e-151
Identity = 209/251 (83.27%), Postives = 230/251 (91.63%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLS-KPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETK 1565
            M+L++G+ H V++NGD+  KPFKIFVGYDPREDLAYEVCRHSILKRSS+PVEITPI QSDLR+ GLYWRER K ESTEFSFSRFLTP+LANY GWA+F+DCDFLYLADIKEL +LID+KYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK LTPEVVN +TGAFLHRF WLED EIGSIP +WNFLEGHNKVVEND +T PKA+HYTRGGPWFEAWKNCEFADLWLNEM +  +ETK
Sbjct:    1 MSLSDGKIHPVSSNGDIKDKPFKIFVGYDPREDLAYEVCRHSILKRSSIPVEITPIKQSDLRKDGLYWRERGKFESTEFSFSRFLTPHLANYEGWAMFVDCDFLYLADIKELRDLIDEKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEVVNTETGAFLHRFSWLEDGEIGSIPFVWNFLEGHNKVVENDPQTRPKAVHYTRGGPWFEAWKNCEFADLWLNEMEECTQETK 251
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: B9HZT1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s11830g PE=4 SV=2)

HSP 1 Score: 449.899 bits (1156), Expect = 2.471e-151
Identity = 208/254 (81.89%), Postives = 229/254 (90.16%), Query Frame = 3 
Query:  810 LSMTLANGEAHQVTNNGDLS--KPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETK 1565
            ++MT+ NGE H VT NG  +  KPFKIFVGYDPRED+AYEVC HSILKRSS+PVEITPIVQSDLR  GLYWRER +LESTEFSF+RFLTP+LANY+GWA+F+DCDFLYLADIKEL +LIDDKYAIMCV HDYTPKE TKMDGAVQT+YPRKNWSSMVLYNCGHPKNK LTPEVVN QTGAFLHRFQWLED+EIGSIP +WNFLEGHNKVVE D+ TFPKAIHYTRGGPWFEAWKNCEFA+LWL E  + ++E K
Sbjct:    1 MTMTVTNGEVHPVTANGGFTIDKPFKIFVGYDPREDIAYEVCHHSILKRSSIPVEITPIVQSDLRTNGLYWRERGQLESTEFSFTRFLTPHLANYDGWAMFVDCDFLYLADIKELRDLIDDKYAIMCVQHDYTPKEATKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEVVNTQTGAFLHRFQWLEDEEIGSIPFVWNFLEGHNKVVEGDTTTFPKAIHYTRGGPWFEAWKNCEFAELWLKEKDECVKEEK 254
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: A0A067KTJ9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02571 PE=4 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 4.041e-150
Identity = 206/250 (82.40%), Postives = 226/250 (90.40%), Query Frame = 3 
Query:  822 LANGEAHQVTNNGDLS--KPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETK 1565
            + NGE H V+ NG ++  KPFKIFVGYDPRED+AYEVC HSI+KRSS+PVEI PI+QS+LR+K LYWRER KLESTEFSFSRFLTPYLANY GWA+F+DCDFLYLADIKEL +LIDDKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK LTPEVVN QTGAFLHRFQWLED++IGSIP +WNFLEGHNKVVE D+ TFPKAIHYTRGGPWF+AWKNCEFADLWL EM +Y  E K
Sbjct:    1 MTNGEIHTVSTNGGITIEKPFKIFVGYDPREDIAYEVCHHSIMKRSSIPVEICPIIQSELRKKNLYWRERGKLESTEFSFSRFLTPYLANYEGWAMFVDCDFLYLADIKELRDLIDDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEVVNTQTGAFLHRFQWLEDEDIGSIPFVWNFLEGHNKVVEGDTTTFPKAIHYTRGGPWFDAWKNCEFADLWLKEMEEYNNEKK 250
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: B9IPX3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s05940g PE=4 SV=2)

HSP 1 Score: 445.277 bits (1144), Expect = 1.714e-149
Identity = 206/251 (82.07%), Postives = 227/251 (90.44%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLS--KPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEET 1562
            MT  NGE H VT NG  +  KPFKIFVGYDP ED+AYEVCRHSILKRSS+PV+ITPIVQS+LR KGLYWRER +LESTEFSFSRFLTP+LANY+GWA+F+DCDFLYLADIKEL +LIDDKYAIMCVHHDY PKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK LTPEVVN QTGAFLHRFQWLED+EIGSIP +WNFLEGHNKVVE D+ TFPKAIHYTRGGPWFEAWK+CEFA++WL E  + ++E 
Sbjct:    1 MTATNGEVHSVTANGGFTNEKPFKIFVGYDPCEDVAYEVCRHSILKRSSIPVDITPIVQSELRTKGLYWRERGQLESTEFSFSRFLTPHLANYDGWAMFVDCDFLYLADIKELRDLIDDKYAIMCVHHDYAPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEVVNTQTGAFLHRFQWLEDEEIGSIPFVWNFLEGHNKVVEGDTTTFPKAIHYTRGGPWFEAWKHCEFAEMWLKEKDECVKEA 251
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: B9S269_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1328320 PE=4 SV=1)

HSP 1 Score: 441.039 bits (1133), Expect = 8.019e-148
Identity = 202/241 (83.82%), Postives = 221/241 (91.70%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLS--KPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWL 1532
            MT+ NGE H V+ NG L+  K FK FVGYDPRED+AY+VCRHSILKRSS+PVEI PI+QS+LR+K LYWRER +LESTEFSFSRFLTPYLANY GWA+F+DCDFLYLAD+KEL +LIDDKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK LTPEVVN QTGAFLHRFQWLED++IGSIP +WNFLEGHNKVVE D+ TFPKAIHYTRGGPWFEAWKNCEFADLWL
Sbjct:    1 MTMTNGEVHTVSANGGLTSNKSFKFFVGYDPREDIAYQVCRHSILKRSSIPVEIIPIIQSELRKKNLYWRERGQLESTEFSFSRFLTPYLANYEGWAVFVDCDFLYLADVKELRDLIDDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPEVVNAQTGAFLHRFQWLEDEDIGSIPFVWNFLEGHNKVVEGDATTFPKAIHYTRGGPWFEAWKNCEFADLWL 241
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: D7KZ33_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475501 PE=4 SV=1)

HSP 1 Score: 439.884 bits (1130), Expect = 2.578e-147
Identity = 202/255 (79.22%), Postives = 229/255 (89.80%), Query Frame = 3 
Query:  816 MTLANGEAHQVT-NNGDL-SKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNA 1574
            MT++NG+    T NNG    KPF+IFVGYDPREDLAY+VCRHS+ KRSS+PVEI PIVQSDLR+KGLYWRER +LESTEFSFSRFLTP+L++Y GWA+F+DCDFLYLADIKEL +LIDDKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK L+PE+VN QTGAFLHRFQWLED+EIGSIP +WNFLEGHN+VVE D  T PKA+HYTRGGPWF+AWK+CEFADLWLNEM +Y +E+K  A
Sbjct:    1 MTISNGDVKSDTCNNGSSEKKPFRIFVGYDPREDLAYQVCRHSVTKRSSIPVEIIPIVQSDLRKKGLYWRERGQLESTEFSFSRFLTPHLSDYQGWAMFVDCDFLYLADIKELTDLIDDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKTLSPEIVNTQTGAFLHRFQWLEDEEIGSIPFVWNFLEGHNRVVEKDPTTQPKAVHYTRGGPWFDAWKDCEFADLWLNEMEEYNKESKKEA 255
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
CDI_ARATH8.987e-14979.22Protein CDI OS=Arabidopsis thaliana GN=CDI PE=2 SV... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2S600_GOSRA0.000e+099.61Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061F0N1_THECC3.163e-16888.93Nucleotide-diphospho-sugar transferases superfamil... [more]
A0A0D2MJU6_GOSRA7.267e-15884.68Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0NVF3_GOSAR9.225e-15884.68Ribosome maturation factor rimM OS=Gossypium arbor... [more]
M5VXU2_PRUPE1.590e-15183.27Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9HZT1_POPTR2.471e-15181.89Uncharacterized protein OS=Populus trichocarpa GN=... [more]
A0A067KTJ9_JATCU4.041e-15082.40Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
B9IPX3_POPTR1.714e-14982.07Uncharacterized protein OS=Populus trichocarpa GN=... [more]
B9S269_RICCO8.019e-14883.82Putative uncharacterized protein OS=Ricinus commun... [more]
D7KZ33_ARALL2.578e-14779.22Putative uncharacterized protein OS=Arabidopsis ly... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 97..270
e-value: 5.3E-7
score: 28.6
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 49..271
NoneNo IPR availablePANTHERPTHR35105FAMILY NOT NAMEDcoord: 28..277
NoneNo IPR availablePANTHERPTHR35105:SF2SUBFAMILY NOT NAMEDcoord: 28..277
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..281
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094108 ID=g.barbadense_cottongen_reftransV1_0094108; Name=g.barbadense_cottongen_reftransV1_0094108; organism=Gossypium barbadense; type=contig; length=1949bp
CAGGAAAAAGCGAATAACTGGCTCCCTTTCCCTCGTTTCATTTCACCGCT
AAATCCTCGCCACAACACATTCATACAAAAATTTCTATTGAATCTAAAAT
AAAAATTGGATAATTTCGAAATTTTAGAGATTAATTTTCTGTTCTTTGAG
TTCCCATTTCTATAAGTAGTCTTCCAAGAGTCTACCTCTTCCCCTTTATT
CTTAATAAACTTTTAGTTCTCTTTCTTCTTTCTTCACTGTCAAGAATTTC
GAGATCCCGCGTTTTCTTCATTTTCTCAGGTATCTCTTTGTTTTGGTTTT
TGGGTCCTCTCTCTCTCTCTCTCTTTTTAGTTTAATTATTGTTTTTCTTT
TCTGGGTTTTAAGCGTATATTTTTGCTGATCTGATTTTTTTTCGTTAATG
GTGCCATGTTTTCTTTGAATTTATGGAATTTTCTGCTAAGTTGGGTTTTT
ATTTATTTGTTTGTTTGATGGATGTGTAGCATTGTGTTGACTGAATTTGA
ATCTCTGTTTCTATTGTTTTAGATTTACGTTTTTCTATGCTTTTCTTGGT
TCCTTTTTACATTAATGGATGCAATGTTAATTCAATAATAAGAGAAATCT
TAAAGTTTCCCTTTCTTGGTTTTGTTTGGCTTCCAAGAATCCACAAGAGA
AAAAAAACAAGTAAAAGAAAAAAAAAGAGTGATATTTCAGTGTGCCATTC
TTAACTAACTGATCCTAGAAAATTTCCCCTTTTTTTGGGGTTTATTTTAT
TATTTTTACTGAATTTTAAAAACTGTGCAGATCTGTGTTATAGTAGAAAA
AAACTGCTGCTATCAATGACTTTGGCTAATGGCGAAGCTCATCAAGTGAC
TAACAATGGCGATTTAAGCAAACCCTTCAAAATCTTTGTCGGTTACGATC
CGCGTGAAGATCTAGCCTATGAGGTCTGCCGCCATTCTATCTTGAAACGT
TCATCGGTTCCTGTCGAGATCACTCCCATTGTTCAATCAGATCTCCGGGA
AAAAGGCCTTTACTGGCGCGAGCGGAACAAGCTCGAGAGTACCGAGTTCT
CGTTTTCCCGGTTCCTGACTCCCTACTTGGCGAATTACAATGGTTGGGCG
CTGTTCATTGACTGTGATTTCCTTTACTTAGCTGATATAAAGGAATTAAT
GGAGTTGATTGATGATAAATATGCGATCATGTGCGTTCATCATGATTATA
CCCCGAAAGAGACCACGAAAATGGATGGTGCAGTGCAGACTTTGTATCCT
CGAAAGAATTGGTCCTCGATGGTGTTGTACAATTGCGGTCATCCGAAGAA
CAAGGGTCTGACTCCAGAAGTTGTAAACAATCAAACGGGCGCTTTTCTTC
ATAGGTTCCAGTGGCTCGAAGATGATGAAATCGGATCGATCCCGTCTATT
TGGAATTTCCTTGAAGGGCATAACAAGGTTGTCGAGAATGACTCAAAAAC
GTTTCCTAAAGCCATACATTATACTCGTGGAGGGCCATGGTTTGAGGCAT
GGAAGAATTGTGAGTTTGCCGATCTTTGGCTGAATGAGATGCATGACTAC
ATCGAAGAAACGAAGTTGAATGCAAGTTAATCAGAATCGGCATGGTGCAT
TGGTAATTTCCTAATTACATGTCAATTTATTCATGCTCCATTTTTATGTT
ATATTCATATATTGAATCTATCTTTGTGTATCCTAGTTCCAATTATGCTT
TAGAGTATATCAGGACGGCTATATATCGATATCGATGCCTCGTGTATGTA
GTTTTTCAATTTTTTTCATTTGTTTCAGTGACTACATATGGGAATATATG
ATCCTTGGAATGTTGGGCAGTATCTTTAGTTGATTAATGAAAGGTCTTTC
ATTTGTTTGTGAATTATGCTTGGTTGGTTGCTGCAAATATTTCTATTTTG
GGTTTCAATTGCTTCAAATAGCGGTCTCGGGATGGCATTCATTAGCGAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans