g.barbadense_cottongen_reftransV1_0093631, g.barbadense_cottongen_reftransV1_0093631 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A0B0NK56_GOSAR (Histone acetyltransferase OS=Gossypium arboreum GN=F383_01658 PE=4 SV=1) HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0 Identity = 321/324 (99.07%), Postives = 321/324 (99.07%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLNQKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQFCLSPKLPCSELTGRMKRVGS 2081 AEYMDIKTLWDRTNDAINTIIR DESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLNQKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQ HIAQNSNRGTDKFPF SNTSPLASNVEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQFCLSPKLPCSELTGRMKRVGS Sbjct: 73 AEYMDIKTLWDRTNDAINTIIRRDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLNQKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQNHIAQNSNRGTDKFPFVSNTSPLASNVEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQFCLSPKLPCSELTGRMKRVGS 396 HSP 2 Score: 155.221 bits (391), Expect = 2.557e-37 Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLP+VVLKAE+IMYSKANSE + T W Sbjct: 1 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPVVVLKAEEIMYSKANSEAEYMDIKTLW 82
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A0D2RUZ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G058400 PE=4 SV=1) HSP 1 Score: 643.654 bits (1659), Expect = 0.000e+0 Identity = 312/327 (95.41%), Postives = 315/327 (96.33%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN---QKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQFCLSPKLPCSELTGRMKRVGS 2081 AEYMDIKTLWDRTNDAINTIIR DESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN QKAEGTT GNLITNSHCMAS SSFLKHTT+NMTDMGSEAQKHIAQN NRGTDKF FASN SPLASNVEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSN +EPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNK SYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHM+VDATLSKRKTIYG PVDQQFCLSPKLPCSELTGRMKRVGS Sbjct: 73 AEYMDIKTLWDRTNDAINTIIRRDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLNPGAQKAEGTTLGNLITNSHCMASDSSFLKHTTVNMTDMGSEAQKHIAQNGNRGTDKFSFASNNSPLASNVEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNTVEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKFSYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMDVDATLSKRKTIYGPPVDQQFCLSPKLPCSELTGRMKRVGS 399 HSP 2 Score: 151.754 bits (382), Expect = 4.216e-36 Identity = 71/82 (86.59%), Postives = 74/82 (90.24%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 MPRPGPRPYVCERRAWHSDRHQPMRGSLI+EIFRVVNEIHSSATKKNKEWQEKLP VVLKAE+IMYSKANSE + T W Sbjct: 1 MPRPGPRPYVCERRAWHSDRHQPMRGSLIQEIFRVVNEIHSSATKKNKEWQEKLPDVVLKAEEIMYSKANSEAEYMDIKTLW 82
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A061GJ72_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_036994 PE=4 SV=1) HSP 1 Score: 464.537 bits (1194), Expect = 3.158e-151 Identity = 236/333 (70.87%), Postives = 264/333 (79.28%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN---QKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASN-----VEKHPP-NTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQFCLSPKLPCSELTGRMKRVGS 2081 AEYMD+K+LWDRTNDAINTII+ DESTETGELLQPCIEAALNLGCT RRTLRSQRNC+PR YL+ Q+AE TTQ NL TN + MASYS F+K T MN+T +GSE+QKHIAQ+SN T KFPFAS PL SN +EK+PP N YSVYPL+YGNHLK EE +HG+GI PKS SN +EPA MGVI +LFS DVDSSN MNQTDV NTSNNPHE CDLSLRLGPLS PCLS G SR + I++T ST LEWN+ LTP ID+ LSS PRSNRD PLN N +LEG H+NVDAT+ KRKT+YG VDQQFCL PKLP S LTGRMK GS Sbjct: 115 AEYMDLKSLWDRTNDAINTIIKRDESTETGELLQPCIEAALNLGCTPRRTLRSQRNCNPRCYLSPGTQEAENTTQANLTTNPNFMASYSGFMKSTIMNVTHLGSESQKHIAQDSNCTTYKFPFASENGPLPSNSQCLPMEKYPPPNLYSVYPLYYGNHLKFEEMQHGFGIFPKSISNTVEPAKMGVIDNLFSSDVDSSNNMNQTDVSNTSNNPHENACDLSLRLGPLSIPCLSVGKSRPQVIEDTGSTSLEWNRFGDLTPSIDKMLSSFPRSNRDDPLNSSLNRWSLEGEHVNVDATMRKRKTVYGPTVDQQFCLPPKLPYSHLTGRMKSAGS 447 HSP 2 Score: 157.918 bits (398), Expect = 7.181e-38 Identity = 89/133 (66.92%), Postives = 97/133 (72.93%), Query Frame = 1 Query: 493 MKKENQKA*ASVEQPTSFSIQPDLAKPLFYFSSKKPRVXXXXXXXXXXXXKMPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFFTFWPLF 891 MKKENQK + S +P L LF F K +S F S S KMPRPGPRPYVCERRAWHSDRHQPMRGSLI+EIFRVVNEIHSSATKKNKEWQEKLP+VVLKAE+IMYSKANSE + L+ Sbjct: 1 MKKENQK-----HKLPQVSTEPGL---LFLFEETKAFLSSPFLLHSKSL-KMPRPGPRPYVCERRAWHSDRHQPMRGSLIQEIFRVVNEIHSSATKKNKEWQEKLPVVVLKAEEIMYSKANSEAEYMDLKSLW 124
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A061GIV2_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_036994 PE=4 SV=1) HSP 1 Score: 420.239 bits (1079), Expect = 1.175e-134 Identity = 219/333 (65.77%), Postives = 245/333 (73.57%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN---QKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASN-----VEKHPP-NTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQFCLSPKLPCSELTGRMKRVGS 2081 AEYMD+K+LWDRTNDAINTII+ DESTETGELLQPCIEAALNLGCT RRTLRSQRNC+PR YL+ Q+AE TTQ NL TN + MASYS F+K T MN+T +GSE+QKHIAQ+SN T KFPFAS PL SN +EK+PP N YSVYPL+YGNHLK EE +HG+GI PKS SN +EPA MGVI +LFS DVDSSN MNQTDV NTSNNPHE CDLSLRLGPLS PCLS G SR + I++T ST LEWN+ S LEG H+NVDAT+ KRKT+YG VDQQFCL PKLP S LTGRMK GS Sbjct: 115 AEYMDLKSLWDRTNDAINTIIKRDESTETGELLQPCIEAALNLGCTPRRTLRSQRNCNPRCYLSPGTQEAENTTQANLTTNPNFMASYSGFMKSTIMNVTHLGSESQKHIAQDSNCTTYKFPFASENGPLPSNSQCLPMEKYPPPNLYSVYPLYYGNHLKFEEMQHGFGIFPKSISNTVEPAKMGVIDNLFSSDVDSSNNMNQTDVSNTSNNPHENACDLSLRLGPLSIPCLSVGKSRPQVIEDTGSTSLEWNRWS------------------------------LEGEHVNVDATMRKRKTVYGPTVDQQFCLPPKLPYSHLTGRMKSAGS 417 HSP 2 Score: 157.918 bits (398), Expect = 4.266e-38 Identity = 89/133 (66.92%), Postives = 97/133 (72.93%), Query Frame = 1 Query: 493 MKKENQKA*ASVEQPTSFSIQPDLAKPLFYFSSKKPRVXXXXXXXXXXXXKMPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFFTFWPLF 891 MKKENQK + S +P L LF F K +S F S S KMPRPGPRPYVCERRAWHSDRHQPMRGSLI+EIFRVVNEIHSSATKKNKEWQEKLP+VVLKAE+IMYSKANSE + L+ Sbjct: 1 MKKENQK-----HKLPQVSTEPGL---LFLFEETKAFLSSPFLLHSKSL-KMPRPGPRPYVCERRAWHSDRHQPMRGSLIQEIFRVVNEIHSSATKKNKEWQEKLPVVVLKAEEIMYSKANSEAEYMDLKSLW 124
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A061GJX6_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_036994 PE=4 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 8.865e-108 Identity = 175/238 (73.53%), Postives = 194/238 (81.51%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN---QKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASN-----VEKHPP-NTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSR 1796 AEYMD+K+LWDRTNDAINTII+ DESTETGELLQPCIEAALNLGCT RRTLRSQRNC+PR YL+ Q+AE TTQ NL TN + MASYS F+K T MN+T +GSE+QKHIAQ+SN T KFPFAS PL SN +EK+PP N YSVYPL+YGNHLK EE +HG+GI PKS SN +EPA MGVI +LFS DVDSSN MNQTDV NTSNNPHE CDLSLRLGPLS PCLS G SR Sbjct: 115 AEYMDLKSLWDRTNDAINTIIKRDESTETGELLQPCIEAALNLGCTPRRTLRSQRNCNPRCYLSPGTQEAENTTQANLTTNPNFMASYSGFMKSTIMNVTHLGSESQKHIAQDSNCTTYKFPFASENGPLPSNSQCLPMEKYPPPNLYSVYPLYYGNHLKFEEMQHGFGIFPKSISNTVEPAKMGVIDNLFSSDVDSSNNMNQTDVSNTSNNPHENACDLSLRLGPLSIPCLSVGKSR 352 HSP 2 Score: 158.303 bits (399), Expect = 1.241e-38 Identity = 89/133 (66.92%), Postives = 97/133 (72.93%), Query Frame = 1 Query: 493 MKKENQKA*ASVEQPTSFSIQPDLAKPLFYFSSKKPRVXXXXXXXXXXXXKMPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFFTFWPLF 891 MKKENQK + S +P L LF F K +S F S S KMPRPGPRPYVCERRAWHSDRHQPMRGSLI+EIFRVVNEIHSSATKKNKEWQEKLP+VVLKAE+IMYSKANSE + L+ Sbjct: 1 MKKENQK-----HKLPQVSTEPGL---LFLFEETKAFLSSPFLLHSKSL-KMPRPGPRPYVCERRAWHSDRHQPMRGSLIQEIFRVVNEIHSSATKKNKEWQEKLPVVVLKAEEIMYSKANSEAEYMDLKSLW 124
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A0D2R678_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_010G115300 PE=4 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 3.863e-101 Identity = 186/332 (56.02%), Postives = 218/332 (65.66%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN---QKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASN-----VEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQFCLSPKLPCSELTGRMKRVGS 2081 AEYMD+KTLWDRTNDAINTIIR DES ETGELLQPCIEAALNLGCT RRTLRSQRNC+PR YLN ++ + +GN + NS M S F+K T+N+T +G E QKH +N TDKFPF L N +EK+PP+ YSV+PLFYGN L+ EE +H + PK SN +EP+ G IH+L P+VDSSNKM T V NTS PHE+ CDLSLRLGPLST S G S+ EI T STF LTP ID++ SS RS RD PL SN ++EG D T+ K KT Y VDQQFCL LP S L+GRM+ GS Sbjct: 45 AEYMDLKTLWDRTNDAINTIIRRDESNETGELLQPCIEAALNLGCTPRRTLRSQRNCNPRCYLNPSTREVDDIARGNPLANSRSMTRCSGFMKPETVNVTHLGFEYQKH----TNCTTDKFPFVFENGSLPINKPCLPIEKYPPSLYSVFPLFYGNRLRYEEMQHDLSVFPKLVSNTVEPSKTGYIHNLLFPNVDSSNKMKHTGVTNTS-KPHELACDLSLRLGPLSTSSPSVGTSQPHEIGKTGSTF-------DLTPEIDKTKSSFLRSKRDDPLKSSSNGCSIEGE----DVTMRKGKTGYCPAVDQQFCLPSNLPYSHLSGRMESAGS 360 HSP 2 Score: 80.8777 bits (198), Expect = 5.719e-13 Identity = 40/50 (80.00%), Postives = 42/50 (84.00%), Query Frame = 1 Query: 742 FRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 FRVVNEIH SATKKNKEWQEKLPIVVLKAE+IMYSKANSE + T W Sbjct: 5 FRVVNEIHCSATKKNKEWQEKLPIVVLKAEEIMYSKANSEAEYMDLKTLW 54
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A0D2SR46_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G115300 PE=4 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 6.972e-99 Identity = 183/329 (55.62%), Postives = 215/329 (65.35%), Query Frame = 3 Query: 1119 MDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN---QKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASN-----VEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQFCLSPKLPCSELTGRMKRVGS 2081 MD+KTLWDRTNDAINTIIR DES ETGELLQPCIEAALNLGCT RRTLRSQRNC+PR YLN ++ + +GN + NS M S F+K T+N+T +G E QKH +N TDKFPF L N +EK+PP+ YSV+PLFYGN L+ EE +H + PK SN +EP+ G IH+L P+VDSSNKM T V NTS PHE+ CDLSLRLGPLST S G S+ EI T STF LTP ID++ SS RS RD PL SN ++EG D T+ K KT Y VDQQFCL LP S L+GRM+ GS Sbjct: 1 MDLKTLWDRTNDAINTIIRRDESNETGELLQPCIEAALNLGCTPRRTLRSQRNCNPRCYLNPSTREVDDIARGNPLANSRSMTRCSGFMKPETVNVTHLGFEYQKH----TNCTTDKFPFVFENGSLPINKPCLPIEKYPPSLYSVFPLFYGNRLRYEEMQHDLSVFPKLVSNTVEPSKTGYIHNLLFPNVDSSNKMKHTGVTNTS-KPHELACDLSLRLGPLSTSSPSVGTSQPHEIGKTGSTF-------DLTPEIDKTKSSFLRSKRDDPLKSSSNGCSIEGE----DVTMRKGKTGYCPAVDQQFCLPSNLPYSHLSGRMESAGS 313
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A0D2LQM6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G033800 PE=4 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.336e-90 Identity = 170/313 (54.31%), Postives = 203/313 (64.86%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN---QKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNP-HEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPL--NPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQFCLS 2030 AEYMD+KTLWDRTNDAINTIIR +ESTETG++LQPCIEAALNLGCTARRT R+QRNCSPR YLN Q+ E TTQGN +TN HC+ SYS F E++KH N +KF AS L N + YSVYPL+YGN LK EE +HG+GI K S+ +EPA M IH L S DV+SSN MNQ D RNT NNP H+ CDLSLRLGPLSTPCLS GN R P ID+SL S R NR+ PL + SN +++EG H++VDA++ KRKT+ +D++ CLS Sbjct: 73 AEYMDLKTLWDRTNDAINTIIRRNESTETGKVLQPCIEAALNLGCTARRTSRNQRNCSPRCYLNPGTQETENTTQGNPMTNPHCLGSYSGF-------------ESEKHTGWNGYFAANKFHIASENGSLPINKKCLSLQKYSVYPLYYGNDLKTEELQHGFGIIHKMISDTVEPAKMVAIHKLLSLDVESSNGMNQIDARNTCNNPHHKSACDLSLRLGPLSTPCLSVGNDR---------------------PAIDKSLPSFHRRNRNDPLNSSSKSNNQSVEGEHIHVDASMRKRKTVNDPTMDRRHCLS 351 HSP 2 Score: 141.354 bits (355), Expect = 9.557e-33 Identity = 65/82 (79.27%), Postives = 74/82 (90.24%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 MPRPGPRPYV E+++WHSDRHQP+RGSL++EIFRVVNEIHSSATKKNKEWQEKLP+VVLKAE+IMYSKANSE + T W Sbjct: 1 MPRPGPRPYVFEKKSWHSDRHQPIRGSLVQEIFRVVNEIHSSATKKNKEWQEKLPVVVLKAEEIMYSKANSEAEYMDLKTLW 82
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A0B0MTV3_GOSAR (Histone acetyltransferase OS=Gossypium arboreum GN=F383_30922 PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.033e-84 Identity = 167/307 (54.40%), Postives = 194/307 (63.19%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN---QKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPC-DLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAP--LNPYSNERNLEGGHMNVDATLSKRKTIYGSPVD 2012 AEYMD+KTL DRTNDAINTIIR +ESTETG++LQPCIEAALNLGCTARRT R+QRNCSPR YLN Q+ E TTQ N +TN HC+ASYS F E++KH N +KF AS L N + P YSVYPL+YGN LK EE HG+GI K S+ +EPA M IH L S DV+SSN MNQ D RNT NNPH DLSLRLGPLSTPCLS GN R P ID+SL S R NR+ P L+ SN +++EG HM VDA++ KRKT+ +D Sbjct: 73 AEYMDLKTLRDRTNDAINTIIRRNESTETGKVLQPCIEAALNLGCTARRTSRNQRNCSPRCYLNPSTQETENTTQRNPMTNPHCLASYSGF-------------ESEKHTGWNGYFTANKFHIASENDSLPINKKCLPLQKYSVYPLYYGNDLKTEELEHGFGIIHKMISDTVEPAKMVAIHKLLSLDVESSNGMNQIDARNTCNNPHHKSARDLSLRLGPLSTPCLSVGNDR---------------------PAIDKSLPSFHRRNRNDPLNLSSNSNNQSVEGEHMYVDASMRKRKTVNDPTMD 345 HSP 2 Score: 139.428 bits (350), Expect = 2.796e-32 Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFFTFWPL 888 MPRPGPRPYV E+++WHSD HQP+RGSL++EIFRVVNEIHSSATKKNKEWQEKLP+VVLKAE+IMYSKANSE + L Sbjct: 1 MPRPGPRPYVFEKKSWHSDGHQPIRGSLVQEIFRVVNEIHSSATKKNKEWQEKLPVVVLKAEEIMYSKANSEAEYMDLKTL 81
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: D7SUU9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05520 PE=4 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.442e-80 Identity = 156/338 (46.15%), Postives = 211/338 (62.43%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLNQKA-----------EGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASN----VEKHPP-NTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTF-LEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPV-DQQFCLSPKLPCSELTGRMK 2069 AEYMD+KTLWDR NDAINTIIR DESTETGE LQPCIEA+LNLGC RR RSQRN +PR YL E + QGN T S M+ Y++F+K ++M++ G E N++ T KF F+S P + N +E +P N +VYPL+ GN L+ EE + G+G+ SN +EPA MG I +LFS +D + K +QTD + + N +I CDLSLRLGPLS PC+S NS +E ++ S+ E +K S L+P +D+ PR N D PL+ ++R+ EG ++N++AT+ KRK + P+ D+QFC PKLP + L GRM+ Sbjct: 73 AEYMDLKTLWDRANDAINTIIRRDESTETGEFLQPCIEASLNLGCPQRRASRSQRNNNPRCYLTPSTQEPISISPSILENSPQGNHTTISQVMSRYATFIKPSSMSVIQPGLEPHSTAFHNNDCPTSKFLFSSENCPPSGNKCLQMEVYPASNVCAVYPLYDGNQLQCEESQCGFGVQSHPKSNPMEPAGMGTIQNLFSYAIDPTKKPSQTDFGHVTENSPKIDCDLSLRLGPLSIPCVSVENSWPQEFEDVGSSCSREGSKFSDLSPQVDKQFPFFPRGNTDDPLDSCLSKRSSEGENLNMEATMRKRKAVISYPLEDRQFCCQPKLPYNYLPGRMR 410 HSP 2 Score: 145.976 bits (367), Expect = 8.871e-34 Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 MPRPGPRPY C RRAWHSDRHQP+RGSLI+EIFRVVNEIHSSATKKNKEWQEKLPIVVLKAE+IMYSKANSE + T W Sbjct: 1 MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEEIMYSKANSEAEYMDLKTLW 82 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0093631 ID=g.barbadense_cottongen_reftransV1_0093631; Name=g.barbadense_cottongen_reftransV1_0093631; organism=Gossypium barbadense; type=contig; length=2607bpback to top |