g.barbadense_cottongen_reftransV1_0093386, g.barbadense_cottongen_reftransV1_0093386 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JMJ16_ARATH (Putative lysine-specific demethylase JMJ16 OS=Arabidopsis thaliana GN=JMJ16 PE=2 SV=1) HSP 1 Score: 505.368 bits (1300), Expect = 9.843e-157 Identity = 264/364 (72.53%), Postives = 305/364 (83.79%), Query Frame = 1 Query: 2272 EQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDS-GSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNE-KYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 +QN ++ LPKGV+RGC EC DCQKV ARWHP+EA RP +EDAPVFYP+E+EFEDTLNYIA IRP+AEKYGICRIVPP SWKPPCPLKEK +WE ++F TRVQRVDKLQNR+SM+K+SK+ N MR+K+R+ M+M +D ++ G SA E+E FGFEPGP FTL FQKYAD+FKAQYF++ E D + KV D E ++E++EGEYWRIV+KATEEIEVLYGADLETGVFGSGFPK SS +S+E KY SGWNLNNFPRLPGS+L YE SDISGVLVPWLY+GMCFSSFCWHVEDHHLYSLN+MHWGAPK+WYGV GKDA KLEEAM+KHLPDLF+EQPDLLHKLVTQLSP Sbjct: 103 DQNCDVKPALPKGVVRGCEECKDCQKVTARWHPDEARRPDLEDAPVFYPSEEEFEDTLNYIAKIRPEAEKYGICRIVPPPSWKPPCPLKEKQVWEGSKFTTRVQRVDKLQNRSSMKKISKLPNQMRKKKRKCMKMGMDSVTNGMGDPCSASTGMNELETFGFEPGPGFTLKDFQKYADEFKAQYFKKSETSTDDKCKVDNSIDCWEPALEDVEGEYWRIVDKATEEIEVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKYEGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRKHLPDLFEEQPDLLHKLVTQLSP 466 HSP 2 Score: 69.3218 bits (168), Expect = 1.740e-10 Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDC 2083 MGTELMR+CVKE++DD+P VPPGFESYA+FTL R + A I SV+ Q + E+ + E+ R++RRRPWIN+ D D+ DC Sbjct: 1 MGTELMRICVKEDSDDLPSVPPGFESYATFTLKRVVPATTSDK--------AKTPAIESVSATEQAKMEVESDEAKA-ARALRRRPWINHSGCD----DDGDC 90
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JM703_ORYSJ (Lysine-specific demethylase JMJ703 OS=Oryza sativa subsp. japonica GN=JMJ703 PE=1 SV=1) HSP 1 Score: 483.026 bits (1242), Expect = 3.398e-148 Identity = 237/360 (65.83%), Postives = 273/360 (75.83%), Query Frame = 1 Query: 2278 NQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 + R R LPKGV+RGC EC+DCQKVIA+W+P A RP +++APVFYPTE+EFEDTL YI SIRP AE YGICRIVPPSSWKPPC LK+K+IWE ++F+TRVQ+VDKLQNR S +K + RRK + + +G S ERFGFEPGPEFTL FQKYADDF QYFR+ D M+ +P SVE+IEGEYWRIVE TEEIEV+YGADLETG FGSGFPK S + + +KY SGWNLNN PRL GSVL++E DISGVLVPW+YVGMCFSSFCWHVEDHHLYSLN+MHWGAPK+WYGVPGKDA LE AM+KHLP+LF+EQPDLLH LVTQ SP Sbjct: 113 STRRRQQLPKGVLRGCAECSDCQKVIAKWNPAGARRPVLDEAPVFYPTEEEFEDTLKYIESIRPMAEPYGICRIVPPSSWKPPCLLKDKSIWEGSKFSTRVQKVDKLQNRKSSKKGRRGGMMKRRKLAESEENSATAHTQTGMQQSP-------ERFGFEPGPEFTLQTFQKYADDFSKQYFRK---DTSMDS----VP-----SVEDIEGEYWRIVEVPTEEIEVIYGADLETGTFGSGFPKLSPETKSDAEDKYAQSGWNLNNLPRLQGSVLSFEGGDISGVLVPWVYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVPGKDAVNLESAMRKHLPELFEEQPDLLHNLVTQFSP 453
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JMJ18_ARATH (Lysine-specific demethylase JMJ18 OS=Arabidopsis thaliana GN=JMJ18 PE=2 SV=1) HSP 1 Score: 390.578 bits (1002), Expect = 7.238e-118 Identity = 206/352 (58.52%), Postives = 248/352 (70.45%), Query Frame = 1 Query: 2305 KGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSD-SGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 K I P +KV+ARW P+EA RP + DAPVF P+ +EF D L YI IRP AE YGICRI+PPS+WKPPC LKEK+IWE +F TR+Q VD LQNR M+K K RR+ R S + S S +A E+FGF G +FTLD+F+KYA FK YF +K++ D+ V P SV++IEGEYWRIVE+ T+E+EV YGADLE GV GSGF K++ + + E+Y SGWNLNN PRLPGSVL++E DISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+ H+G PK+WYGVPG +A LE+AM+KHLPDLF+EQPDLLH LVTQ SP Sbjct: 27 KDTIMEQPSSPRHRKVVARWLPDEAQRPIINDAPVFTPSLEEFVDPLAYIEKIRPLAEPYGICRIIPPSTWKPPCRLKEKSIWEQTKFPTRIQTVDLLQNREPMKKKPKSRKRKRRRNSRMGSSKRRSGSSPAESTSSPEAE----EKFGFNSGSDFTLDEFEKYALHFKDSYFEKKDSGGDI---VKWTP-----SVDDIEGEYWRIVEQPTDEVEVYYGADLENGVLGSGFYKRAEKFTGSDMEQYTLSGWNLNNLPRLPGSVLSFEDCDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMRKHLPDLFEEQPDLLHGLVTQFSP 366
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JMJ14_ARATH (Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 PE=1 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 4.648e-117 Identity = 192/339 (56.64%), Postives = 240/339 (70.80%), Query Frame = 1 Query: 2347 KVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRN--SMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 K+ ARW+P EACRP V+DAP+FYPT ++F+D L YI +R KAE YGICRIVPP +W+PPCPLKEK IWEN++F TR+Q +D LQNR +K R + Y R D D+ S S+D+ +FGF+ GP+FTL++FQKY + FK YF+ + D G + V+++EGEYWRIVE+AT+E+EV YGADLET FGSGFPK ++ ++Y GWNLNN RLPGSVL +ES DISGV+VPWLYVGMCFS+FCWHVEDHHLYS+N++H G PK+WYG+PG A E MKK LPDLF+EQPDLLH+LVTQLSP Sbjct: 38 KITARWNPSEACRPLVDDAPIFYPTNEDFDDPLGYIEKLRSKAESYGICRIVPPVAWRPPCPLKEKKIWENSKFPTRIQFIDLLQNREPIKKSTKTKKRKRRRISKIGYTRRKRDSGCDTASSGSSDSE----GKFGFQTGPDFTLEEFQKYDEYFKECYFQSE----DHPGSKASENKKFKPKVKDLEGEYWRIVEQATDEVEVYYGADLETKKFGSGFPKYKPGYPISEADQYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRLPDLFEEQPDLLHQLVTQLSP 368
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JMJ15_ARATH (Lysine-specific demethylase JMJ15 OS=Arabidopsis thaliana GN=JMJ15 PE=2 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 1.237e-114 Identity = 205/367 (55.86%), Postives = 246/367 (67.03%), Query Frame = 1 Query: 2266 SFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMS-KVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNE--KYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 S E +R H KG P KV+ARW P RP + +APVF+PT +EFEDTL YI IRP AE +GICRIVPPS+W PPC LK +IW+N F TRVQ VD LQNR ++K + K R K R + S S S+ + A E E FGFE GPEFTL+KF+KYA DFK YF RK+N + + SVE IEGEYWRI+EK T E++VLYG DLE + GSGF K ++ N+ KYI+SGWNLNN RL GS+L++E +ISGV VPWLYVGMCFS+FCWHVED+HLYSLN+ H+G PK+WYGVPG A LE+AM+KHLPDLFDEQPDLLH+LVTQ SP Sbjct: 16 SVEPPRRRCHRKNKGTNVEPPSSPYHPKVLARWDPANEKRPDIGEAPVFHPTSEEFEDTLAYIEKIRPLAESFGICRIVPPSNWSPPCRLKGDSIWKNKNFPTRVQFVDLLQNRGPVKKKTPKGRKRKRGKYSRTVAPKKRNGSVSKSVSTPKA--TEEENFGFESGPEFTLEKFEKYAQDFKDSYFERKDN-------------VGDPSVEEIEGEYWRIIEKETNEVKVLYGTDLENPILGSGF-SKGVKIPTRRNDMDKYISSGWNLNNLARLQGSLLSFEDCEISGVQVPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPKVWYGVPGSHATGLEKAMRKHLPDLFDEQPDLLHELVTQFSP 366
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JMJ19_ARATH (Probable inactive lysine-specific demethylase JMJ19 OS=Arabidopsis thaliana GN=JMJ19 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 9.311e-64 Identity = 139/322 (43.17%), Postives = 180/322 (55.90%), Query Frame = 1 Query: 2392 VEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 +E+APVF PTE+EF DTL+YI+S+R +AE YGIC +VPP SWKPPC LKEK IWE + F +VQ +Q N RK+ K + +DS S + C VER GP +TL F+ +AD +K +F K+ + E L +E V +IE EY +IVE EI VLYG DL+T FGSGFP + S +SGWNLN+ +LPGS+L+ E D V VP L VGMC SS W E LYSL ++H GAP++WY V G K + AMK + ++ EQP H V +SP Sbjct: 105 LEEAPVFNPTEEEFRDTLSYISSLRDRAEPYGICCVVPPPSWKPPCLLKEKQIWEASTFFPQVQLFG-IQTEN--RKIKK-----------------EVDADSNDAASEGVQLCRVER-----GPGYTLKSFKNFADTYKKSHFGMKDEVLGSENSSPSLKP-NELIVADIEKEYRQIVESPLIEIGVLYGNDLDTATFGSGFP-----LSAPSESSKYSSGWNLNSTAKLPGSLLSLE--DCESVCVPRLSVGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGCHRSKFKAAMKSFILEMSGEQPKKSHNPVMMMSP 393
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5_DROME (Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.981e-55 Identity = 103/207 (49.76%), Postives = 133/207 (64.25%), Query Frame = 1 Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 E FGFE E+TL +F + AD FK +YFR+ +H E +E E+WRIV E++ V YGADL T GSGFP KSS L +++Y S WNLNN P L S+L + ++DISG+ PW+YVGMCF++FCWH EDH YS+N++HWG PK WYGVPG A + EE MK+ P+LF QPDLLH+LVT ++P Sbjct: 505 EAFGFEQAEREYTLQQFGQMADQFKQEYFRKP---------------VHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNP 696 HSP 2 Score: 63.5438 bits (153), Expect = 1.083e-8 Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619 + PVF PT +EF++ L YI+ IR AEK GI +I+PP++W PP + + RF RVQR+++L+ + ++ Sbjct: 160 ECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWSPPFAVDVDKL----RFVPRVQRLNELEAKTRVK 229
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5A_MOUSE (Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.172e-54 Identity = 107/208 (51.44%), Postives = 136/208 (65.38%), Query Frame = 1 Query: 2740 ERFGFEPG-PEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVG-LASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 E FGFE E+TL F + AD+FK+ YF +P +H E +E E+WR+V E++ V YGAD+ + FGSGFPKK Q L E+Y SGWNLNN P L SVL + + DISG+ VPWLYVGMCFSSFCWH+EDH YS+N++HWG PK WYGVP A +LEE M++ P+LF+ QPDLLH+LVT ++P Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYFN--------------MP-VHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPKKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNP 542 HSP 2 Score: 66.6254 bits (161), Expect = 1.502e-9 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619 + PVF P+ +EF D L++I IRP AEK GIC+I PP W+PP + K RF RVQR+++L+ +R Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPFAEKTGICKIRPPKDWQPPFACEVKTF----RFTPRVQRLNELEAMTRVR 87
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5D_CANFA (Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.651e-54 Identity = 107/208 (51.44%), Postives = 135/208 (64.90%), Query Frame = 1 Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLA-SNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 E FGFE E+TL F + AD FKA YF +P +H E +E E+WR+V E++ V YGAD+ + FGSGFP SSQ L+ E+Y SGWNLN P L SVL + ++DISG+ VPWLYVGM FS+FCWH+EDH YS+N++HWG PK WYGVP A +LEE MK+ P+LFD QPDLLH+LVT ++P Sbjct: 374 EAFGFEQATQEYTLQSFGEMADSFKADYFS--------------MP-VHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSQRILSPEEEEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEQLEEVMKRLTPELFDSQPDLLHQLVTLMNP 566 HSP 2 Score: 70.0922 bits (170), Expect = 1.089e-10 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619 + PVF PT EF D L+YI IRP AEK GIC+I PP+ W+PP ++ +N RF R+QR+++L+ + ++ Sbjct: 13 ECPVFEPTWAEFRDPLDYITKIRPIAEKSGICKIRPPADWQPPFAVE----VDNFRFTPRIQRLNELEAQTRVK 82
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5B_HUMAN (Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3) HSP 1 Score: 210.305 bits (534), Expect = 6.818e-54 Identity = 102/208 (49.04%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLA-SNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 E FGFE ++TL F + AD FK+ YF +P +H E +E E+WR+V E++ V YGAD+ + FGSGFP + ++ L+ E+Y++SGWNLNN P + SVL + ++DI G+ +PWLYVGMCFSSFCWH+EDH YS+N++HWG PK WYGVPG A +LE MKK P+LF QPDLLH+LVT ++P Sbjct: 366 EAFGFEQAARDYTLRTFGEMADAFKSDYFN--------------MP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNP 558
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2R0C8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G276200 PE=4 SV=1) HSP 1 Score: 719.153 bits (1855), Expect = 0.000e+0 Identity = 359/366 (98.09%), Postives = 361/366 (98.63%), Query Frame = 1 Query: 2260 CHSFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 C +QNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGS WSADA FCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKV+VLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP Sbjct: 103 CEKLDQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGSSWSADAGFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVSVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 468 HSP 2 Score: 225.328 bits (573), Expect = 7.197e-57 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 2 Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVA+PVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ Sbjct: 1 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVASPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 108
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2PFN0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G276200 PE=4 SV=1) HSP 1 Score: 718.768 bits (1854), Expect = 0.000e+0 Identity = 359/366 (98.09%), Postives = 361/366 (98.63%), Query Frame = 1 Query: 2260 CHSFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 C +QNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGS WSADA FCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKV+VLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP Sbjct: 103 CEKLDQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGSSWSADAGFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVSVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 468 HSP 2 Score: 225.713 bits (574), Expect = 2.577e-57 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 2 Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVA+PVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ Sbjct: 1 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVASPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 108
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2R0D2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G276200 PE=4 SV=1) HSP 1 Score: 718.768 bits (1854), Expect = 0.000e+0 Identity = 359/366 (98.09%), Postives = 361/366 (98.63%), Query Frame = 1 Query: 2260 CHSFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 C +QNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGS WSADA FCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKV+VLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP Sbjct: 118 CEKLDQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGSSWSADAGFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVSVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 483 HSP 2 Score: 232.261 bits (591), Expect = 5.054e-59 Identity = 112/123 (91.06%), Postives = 116/123 (94.31%), Query Frame = 2 Query: 1730 LGCWDAELILN*AILMGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098 + C + L+ AILMGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVA+PVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ Sbjct: 1 MQCLNCHLLSCVAILMGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVASPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 123
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A061F0P4_THECC (Transcription factor jumonji family protein / zinc finger family protein isoform 1 OS=Theobroma cacao GN=TCM_026189 PE=4 SV=1) HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0 Identity = 320/367 (87.19%), Postives = 339/367 (92.37%), Query Frame = 1 Query: 2260 CHSFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWS-ADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 C +QN RLR NLPKGVIRGCPECNDCQKV ARW PEEACRP +EDAPVFYPTE+EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RF TRVQRVDKLQNR+SMRKMSKVNN+MRRKRRR MRMAVDC SDSGSI ADA FCEVERFGFEPGPEFTL+KFQKYADDFKAQY RR+EN VDMEG++T+L + E SVENIEGEYWR+VEKATEEIEVLYGADLETGVFGSGFPKK SQV SNEKYI SGWNLNNFPRLPGSVL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MHWGAPKIWYGVPGKDA KLEEAM+KHLPDLFDEQPDLLHKLVTQLSP Sbjct: 100 CGKLDQNLRLRLNLPKGVIRGCPECNDCQKVTARWRPEEACRPDLEDAPVFYPTEEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNVWENSRFTTRVQRVDKLQNRDSMRKMSKVNNNMRRKRRRCMRMAVDCGSDSGSISGSADAGFCEVERFGFEPGPEFTLEKFQKYADDFKAQYLRRRENGVDMEGRMTILQEHPEPSVENIEGEYWRVVEKATEEIEVLYGADLETGVFGSGFPKKPSQVEFVSNEKYIKSGWNLNNFPRLPGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKIWYGVPGKDASKLEEAMRKHLPDLFDEQPDLLHKLVTQLSP 466 HSP 2 Score: 156.762 bits (395), Expect = 2.271e-35 Identity = 81/108 (75.00%), Postives = 89/108 (82.41%), Query Frame = 2 Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098 MGTELMRVCVKEENDDIP VPPGFESYASFTL R AQ+ K E+DNV CSA A+T S +PV+KETELGN + KITRS+RRRPWINYGRYDNS E+E DC KLDQ Sbjct: 1 MGTELMRVCVKEENDDIPSVPPGFESYASFTLKR-AQDTEKQESDNVMCCSAPAST--SETSPVKKETELGNRGNAKITRSLRRRPWINYGRYDNSSEEEPDCGKLDQ 105
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A061F2J5_THECC (Transcription factor jumonji family protein / zinc finger family protein isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_026189 PE=4 SV=1) HSP 1 Score: 582.408 bits (1500), Expect = 0.000e+0 Identity = 296/367 (80.65%), Postives = 315/367 (85.83%), Query Frame = 1 Query: 2260 CHSFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDC-SSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 C +QN RLR NLPKGVIRGCPECNDCQKV ARW PEEACRP +EDAPVFYPTE+EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RF TRVQRVDKLQNR+SMRKMSKVNN+MRRKRRR MRMAVDC S SADA FCEVERFGFEPGPEFTL+KFQKYADDFKAQY RR+EN VDMEG++T+L + E SVENIEGEYWR+VEKATEEIEVLYGADLETGVFGSGFPKK SQV VL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MHWGAPKIWYGVPGKDA KLEEAM+KHLPDLFDEQPDLLHKLVTQLSP Sbjct: 3 CGKLDQNLRLRLNLPKGVIRGCPECNDCQKVTARWRPEEACRPDLEDAPVFYPTEEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNVWENSRFTTRVQRVDKLQNRDSMRKMSKVNNNMRRKRRRCMRMAVDCGSDSGSISGSADAGFCEVERFGFEPGPEFTLEKFQKYADDFKAQYLRRRENGVDMEGRMTILQEHPEPSVENIEGEYWRVVEKATEEIEVLYGADLETGVFGSGFPKKPSQVEF----------------------VLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKIWYGVPGKDASKLEEAMRKHLPDLFDEQPDLLHKLVTQLSP 347
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2SGH6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G187600 PE=4 SV=1) HSP 1 Score: 577.015 bits (1486), Expect = 0.000e+0 Identity = 282/344 (81.98%), Postives = 311/344 (90.41%), Query Frame = 1 Query: 2326 PECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 P+ +V ARW PEEACRP +ED PVFYPT++EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RFATRVQRVDKLQNR+ MRKMS+ NN++RRKRRR MRMA+DC DSGSI +DA E+E FGFE GPEFTLD+FQKYAD+FK QYFR KENDV+MEGK+T+L D HE S++NIEGEYWRIVEKATEEIEVLYGADLETGVFGSGF KK +QVGLAS+EKYI SGWNLNNFPRL GSVL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MH GAPKIWYGVPGKDA KLE+AM+KHLPDLFDEQPDLLHKLVTQLSP Sbjct: 67 PDHGKLNQVTARWRPEEACRPDIEDVPVFYPTDEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNMWENSRFATRVQRVDKLQNRDPMRKMSEANNNIRRKRRRCMRMAIDCGPDSGSISESDAGLSELEGFGFEVGPEFTLDRFQKYADNFKTQYFRLKENDVNMEGKMTILQDHHEPSIQNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFHKKLNQVGLASDEKYIKSGWNLNNFPRLSGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHLGAPKIWYGVPGKDASKLEKAMRKHLPDLFDEQPDLLHKLVTQLSP 410 HSP 2 Score: 75.8702 bits (185), Expect = 1.426e-10 Identity = 48/110 (43.64%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 1781 TELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSV--RRRPWINYGRYDNSPEDELDCEKLDQVS 2104 EL+RVC++E+NDDI VPP S+ A V+K T L N ES+KITRS+ RRRPWINYG+YDNS EDE D KL+QV+ Sbjct: 1 MELVRVCLEEKNDDISSVPPA----------------------------------STRAILVEKGTGLANDESSKITRSMSMRRRPWINYGQYDNSSEDEPDHGKLNQVT 76
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2VFL5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G187600 PE=4 SV=1) HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0 Identity = 282/344 (81.98%), Postives = 311/344 (90.41%), Query Frame = 1 Query: 2326 PECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 P+ +V ARW PEEACRP +ED PVFYPT++EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RFATRVQRVDKLQNR+ MRKMS+ NN++RRKRRR MRMA+DC DSGSI +DA E+E FGFE GPEFTLD+FQKYAD+FK QYFR KENDV+MEGK+T+L D HE S++NIEGEYWRIVEKATEEIEVLYGADLETGVFGSGF KK +QVGLAS+EKYI SGWNLNNFPRL GSVL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MH GAPKIWYGVPGKDA KLE+AM+KHLPDLFDEQPDLLHKLVTQLSP Sbjct: 96 PDHGKLNQVTARWRPEEACRPDIEDVPVFYPTDEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNMWENSRFATRVQRVDKLQNRDPMRKMSEANNNIRRKRRRCMRMAIDCGPDSGSISESDAGLSELEGFGFEVGPEFTLDRFQKYADNFKTQYFRLKENDVNMEGKMTILQDHHEPSIQNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFHKKLNQVGLASDEKYIKSGWNLNNFPRLSGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHLGAPKIWYGVPGKDASKLEKAMRKHLPDLFDEQPDLLHKLVTQLSP 439 HSP 2 Score: 119.783 bits (299), Expect = 5.675e-24 Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 1781 TELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITR--SVRRRPWINYGRYDNSPEDELDCEKLDQVS 2104 EL+RVC++E+NDDI VPPGFE ASFTL AQ+ +HE DN+ CSAS I V+K T L N ES+KITR S+RRRPWINYG+YDNS EDE D KL+QV+ Sbjct: 1 MELVRVCLEEKNDDISSVPPGFEPRASFTLKTEAQDTKRHERDNLICCSASTRAIL-----VEKGTGLANDESSKITRSMSMRRRPWINYGQYDNSSEDEPDHGKLNQVT 105
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2U3J2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G187600 PE=4 SV=1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 281/338 (83.14%), Postives = 310/338 (91.72%), Query Frame = 1 Query: 2344 QKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 ++V ARW PEEACRP +ED PVFYPT++EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RFATRVQRVDKLQNR+ MRKMS+ NN++RRKRRR MRMA+DC DSGSI +DA E+E FGFE GPEFTLD+FQKYAD+FK QYFR KENDV+MEGK+T+L D HE S++NIEGEYWRIVEKATEEIEVLYGADLETGVFGSGF KK +QVGLAS+EKYI SGWNLNNFPRL GSVL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MH GAPKIWYGVPGKDA KLE+AM+KHLPDLFDEQPDLLHKLVTQLSP Sbjct: 3 KQVTARWRPEEACRPDIEDVPVFYPTDEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNMWENSRFATRVQRVDKLQNRDPMRKMSEANNNIRRKRRRCMRMAIDCGPDSGSISESDAGLSELEGFGFEVGPEFTLDRFQKYADNFKTQYFRLKENDVNMEGKMTILQDHHEPSIQNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFHKKLNQVGLASDEKYIKSGWNLNNFPRLSGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHLGAPKIWYGVPGKDASKLEKAMRKHLPDLFDEQPDLLHKLVTQLSP 340
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2W7D3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G187600 PE=4 SV=1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 281/338 (83.14%), Postives = 310/338 (91.72%), Query Frame = 1 Query: 2344 QKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 ++V ARW PEEACRP +ED PVFYPT++EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RFATRVQRVDKLQNR+ MRKMS+ NN++RRKRRR MRMA+DC DSGSI +DA E+E FGFE GPEFTLD+FQKYAD+FK QYFR KENDV+MEGK+T+L D HE S++NIEGEYWRIVEKATEEIEVLYGADLETGVFGSGF KK +QVGLAS+EKYI SGWNLNNFPRL GSVL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MH GAPKIWYGVPGKDA KLE+AM+KHLPDLFDEQPDLLHKLVTQLSP Sbjct: 124 KQVTARWRPEEACRPDIEDVPVFYPTDEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNMWENSRFATRVQRVDKLQNRDPMRKMSEANNNIRRKRRRCMRMAIDCGPDSGSISESDAGLSELEGFGFEVGPEFTLDRFQKYADNFKTQYFRLKENDVNMEGKMTILQDHHEPSIQNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFHKKLNQVGLASDEKYIKSGWNLNNFPRLSGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHLGAPKIWYGVPGKDASKLEKAMRKHLPDLFDEQPDLLHKLVTQLSP 461 HSP 2 Score: 117.472 bits (293), Expect = 2.394e-23 Identity = 64/108 (59.26%), Postives = 76/108 (70.37%), Query Frame = 2 Query: 1781 TELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITR--SVRRRPWINYGRYDNSPEDELDCEKLDQ 2098 EL+RVC++E+NDDI VPPGFE ASFTL AQ+ +HE DN+ CSAS I V+K T L N ES+KITR S+RRRPWINYG+YDNS EDE D KL+Q Sbjct: 1 MELVRVCLEEKNDDISSVPPGFEPRASFTLKTEAQDTKRHERDNLICCSASTRAIL-----VEKGTGLANDESSKITRSMSMRRRPWINYGQYDNSSEDEPDHGKLNQ 103
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A067DSI0_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0443881mg PE=4 SV=1) HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0 Identity = 283/363 (77.96%), Postives = 311/363 (85.67%), Query Frame = 1 Query: 2275 QNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSI-WSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLH-EASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 QN R LPKGVIRGCP C+DCQKV ARW PE++CRP +EDAPVFYPTE+EF+DTL YIASIRPKAE YGICRIVPPSSWKPPCPLKEK IW+++ F TRVQRVDKLQNRNSMRK+S+++N RRKRRR RMAVDC SDSG++ S D E ERFGFEPGP FTL+ FQKYAD FKAQYF R +ND G T + + H E VENIEGEYWRIVEKATEEIEVLYGADLET VFGSGFPK +QVG AS+E+YI SGWNLNNFPRLPGSVL+YES DISGVLVPWLY+GMCFSSFCWHVEDHHLYSLN+MHWGAPK+WYGVPGKDA KLEEAM+KHL DLF+EQPDLLHKLVTQLSP Sbjct: 104 QNFTARPCLPKGVIRGCPTCSDCQKVTARWRPEDSCRPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTRVQRVDKLQNRNSMRKVSRIHNHSRRKRRRSTRMAVDCGSDSGNVSASGDVGCYEDERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSP 466 HSP 2 Score: 95.9005 bits (237), Expect = 5.763e-17 Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 2 Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098 MGTELMRVC+KEEND++P VPPGFES+ASFTL R Q+ KH+ D S SA+ +S + V ETE+ ++ K R +RRRP INYG D+S EDE D KL Q Sbjct: 1 MGTELMRVCIKEENDEVPSVPPGFESFASFTLKR-VQDTEKHDCD---ITSCSASASASESLSVHMETEVKVADAAKAARPLRRRPGINYGLLDHSSEDESDSGKLGQ 104 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0093386 ID=g.barbadense_cottongen_reftransV1_0093386; Name=g.barbadense_cottongen_reftransV1_0093386; organism=Gossypium barbadense; type=contig; length=3359bpback to top |