g.barbadense_cottongen_reftransV1_0093367, g.barbadense_cottongen_reftransV1_0093367 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0093367
Unique Name	g.barbadense_cottongen_reftransV1_0093367
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	1892

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
At05	chromosome	g.barbadense_cottongen_reftransV1_0093367:1..1892 . At05:4831557..4835634 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Match: CIPKQ_ARATH (CBL-interacting serine/threonine-protein kinase 26 OS=Arabidopsis thaliana GN=CIPK26 PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.847e-63
Identity = 120/207 (57.97%), Postives = 134/207 (64.73%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            M++PK++RRVGKYE+G+T+G+GTFAKV+ A NTETGE VALKILDKEKVLKHKMAEQI+REI TMKLI HPNVVRLYEV+ SKTKI+IVLE+ TGGELFDKIV                                                  H   LK  N R       +YF QLIN VDYCHSRGVYHRDLKPENLLLDA GNL
Sbjct:    1 MNRPKVQRRVGKYEVGKTLGQGTFAKVRCAVNTETGERVALKILDKEKVLKHKMAEQIRREICTMKLINHPNVVRLYEVLASKTKIYIVLEFGTGGELFDKIV--------------------------------------------------HDGRLKEENAR-------KYFQQLINAVDYCHSRGVYHRDLKPENLLLDAQGNL 150

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BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 7.099e-60
Identity = 110/199 (55.28%), Postives = 131/199 (65.83%), Query Frame = 1

Query: 1294 RVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            RVG+YE+G+TIGEG+FAKVK AR+T TG+ +A+K+LD+  VL+HKM EQIKREI+TMKLIKHPNVV+L+EVM SK+KI++VLEYV GGELFDKIV            +S R+G                                             EDEARRYFHQLIN VDYCHSRGVYHRDLKPENLLLD++G L
Sbjct:   23 RVGRYELGKTIGEGSFAKVKVARDTRTGDTLAIKVLDRNHVLRHKMVEQIKREISTMKLIKHPNVVQLHEVMASKSKIYMVLEYVDGGELFDKIV------------NSGRLG---------------------------------------------EDEARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDSHGAL 164

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BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Match: CIPK3_ARATH (CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.794e-51
Identity = 91/100 (91.00%), Postives = 99/100 (99.00%), Query Frame = 1

Query: 1282 KIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS 1581
            ++KRRVGKYE+GRTIGEGTFAKVKFARN+ETGEPVALKILDKEKVLKHKMAEQI+REIATMKLIKHPNVV+LYEVM SKTKIFI+LEYVTGGELFDKIV+
Sbjct:    6 QVKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREIATMKLIKHPNVVQLYEVMASKTKIFIILEYVTGGELFDKIVN 105

HSP 2 Score: 102.064 bits (253), Expect = 9.041e-22
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 1

Query: 1747 VNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            VN+GRM+EDEARRYF QLI+ VDYCHSRGVYHRDLKPENLLLD+YGNL
Sbjct:  104 VNDGRMKEDEARRYFQQLIHAVDYCHSRGVYHRDLKPENLLLDSYGNL 151

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 3.047e-51
Identity = 91/104 (87.50%), Postives = 100/104 (96.15%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS 1581
            MS  K+KRRVGKYE+GRTIGEGTFAKVKFAR+TETG+PVA+KILDKEKVLKHKM EQIKREI+TMKLIKHPNVVR+YEVMGSKTKI+IVLEYVTGGELFD IV+
Sbjct:    1 MSTTKVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTIVN 104

HSP 2 Score: 105.531 bits (262), Expect = 6.232e-23
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 1

Query: 1747 VNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            VN+GRMREDEARRYF QLIN VDYCHSRGVYHRDLKPENLLLD+YGNL
Sbjct:  103 VNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNL 150

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.234e-50
Identity = 90/104 (86.54%), Postives = 99/104 (95.19%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS 1581
            MS  K+KRRVGKYE+GRTIGEGTFAKVKFAR+TETG+PVA+KILDKEKVLKHKM EQIKREI+TMKLIKHPNVVR+YEVMGSKT I+IVLEYVTGGELFD IV+
Sbjct:    1 MSTTKVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTNIYIVLEYVTGGELFDTIVN 104

HSP 2 Score: 105.531 bits (262), Expect = 8.031e-23
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 1

Query: 1747 VNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            VN+GRMREDEARRYF QLIN VDYCHSRGVYHRDLKPENLLLD+YGNL
Sbjct:  103 VNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNL 150

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BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.024e-45
Identity = 81/106 (76.42%), Postives = 94/106 (88.68%), Query Frame = 1

Query: 1264 REMSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS 1581
            R    PK+KRRVGKYE+GRTIGEGTFAKV+FA+NTE  EPVA+KILDKEKV KH++ EQI+REI TMKL+KHPNVVRL+EVMGSK +IFIVLEYVTGGELF+ I +
Sbjct:    6 RAALSPKVKRRVGKYELGRTIGEGTFAKVRFAKNTENDEPVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIAT 111

HSP 2 Score: 90.8929 bits (224), Expect = 5.104e-18
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 1

Query: 1753 NGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            NGR++E+EAR+YF QLIN VDYCHSRGVYHRDLK ENLLLDA GNL
Sbjct:  112 NGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNL 157

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BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 8.233e-42
Identity = 77/104 (74.04%), Postives = 92/104 (88.46%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS 1581
            MS    + RVG+YE+GRT+GEGTFAKVKFARN ++GE VA+KILDK+KVLKHKM  QIKREI+TMKLI+HPNV+R++EVM SKTKI+IV+E VTGGELFDKI S
Sbjct:    1 MSVSGGRTRVGRYELGRTLGEGTFAKVKFARNADSGENVAIKILDKDKVLKHKMIAQIKREISTMKLIRHPNVIRMHEVMASKTKIYIVMELVTGGELFDKIAS 104

HSP 2 Score: 91.2781 bits (225), Expect = 4.029e-18
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 1

Query: 1756 GRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            GR++ED+AR+YF QLIN VDYCHSRGVYHRDLKPENLLLDA G L
Sbjct:  106 GRLKEDDARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDASGTL 150

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.774e-41
Identity = 71/96 (73.96%), Postives = 90/96 (93.75%), Query Frame = 1

Query: 1291 RRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIV 1578
            RRVGKYE+GRTIGEGTFAKVKFA+NTE+GE VA+K++D+  +LKHKMA+QIKREI+ MKL++HPNVVRL+EV+ S+ KIFI+LE++TGGELFDKI+
Sbjct:    8 RRVGKYEVGRTIGEGTFAKVKFAQNTESGESVAMKVVDRSSILKHKMADQIKREISIMKLVRHPNVVRLHEVLASRKKIFIILEFITGGELFDKII 103

HSP 2 Score: 83.5741 bits (205), Expect = 1.209e-15
Identity = 34/48 (70.83%), Postives = 42/48 (87.50%), Query Frame = 1

Query: 1747 VNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            + +GR+ E +ARRYF QLI+ VD+CHS+GVYHRDLKPENLLLD+ GNL
Sbjct:  103 IRHGRLNEADARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNL 150

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 7.385e-41
Identity = 90/204 (44.12%), Postives = 115/204 (56.37%), Query Frame = 1

Query: 1288 KRRV--GKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHK-MAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            +RRV  GKYEMGR +G+GTFAKV + +    GE VA+K+++K++V+K   M EQIKREI+ MKL++HPN+V L EVM +KTKIF V+E+                           V G  L C                               K++ G++ ED ARRYF QLI+ VDYCHSRGV HRDLKPENLLLD  G+L
Sbjct:    4 ERRVLFGKYEMGRLLGKGTFAKVYYGKEIIGGECVAIKVINKDQVMKRPGMMEQIKREISIMKLVRHPNIVELKEVMATKTKIFFVMEF---------------------------VKGGELFC-------------------------------KISKGKLHEDAARRYFQQLISAVDYCHSRGVSHRDLKPENLLLDENGDL 149

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Match: CIPKO_ORYSJ (CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.008e-41
Identity = 89/201 (44.28%), Postives = 115/201 (57.21%), Query Frame = 1

Query: 1288 KRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            K+RVG+YE+GRTIG+GTFAKVKFA + +TG  VA+K+LDK+ +L H+M  QIKREI+ MK+++HPN+VRL EV+  KTKI+I+LE +TGGELFDKI                                       R+   R   +  +F  L          +A  Y H          S+GVYHRDLKPENLLLD+ GNL
Sbjct:   12 KKRVGRYEVGRTIGQGTFAKVKFAVDADTGAAVAMKVLDKDTILNHRMLHQIKREISIMKIVRHPNIVRLNEVLAGKTKIYIILELITGGELFDKIA--------------------------------------RQGKLRENEARKYFQQLI---------DAINYCH----------SKGVYHRDLKPENLLLDSRGNL 155

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BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Match: G2XLC6_ORYGL (Non-specific serine/threonine protein kinase OS=Oryza glaberrima GN=Ogl12g0051E04_12 PE=4 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 1.743e-78
Identity = 138/207 (66.67%), Postives = 148/207 (71.50%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            MS  K+KRRVGKYE+GRTIGEGTFAKVKFAR+TETG+PVA+KILDKEKVLKHKM EQIKREI+TMKLIKHPNVVR+YEVMGSKTKI+IVLEYVTGGELFD IVS           DS  V                                        N+GRMREDEARRYF QLIN VDYCHSRGVYHRDLKPENLLLD+YGNL
Sbjct:    1 MSTTKVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTIVS-----------DSAMV----------------------------------------NHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNL 156

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Match: G2XMN1_ORYGL (Non-specific serine/threonine protein kinase OS=Oryza glaberrima GN=Ogl11g0031P10_15 PE=4 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.309e-75
Identity = 137/216 (63.43%), Postives = 147/216 (68.06%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQ---------IKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            MS  K+KRRVGKYE+GRTIGEGTFAKVKFAR+TETG+PVA+KILDKEKVLKHKM EQ         IKREI+TMKLIKHPNVVR+YEVMGSKT I+IVLEYVTGGELFD IVS           DS  V                                        N+GRMREDEARRYF QLIN VDYCHSRGVYHRDLKPENLLLD+YGNL
Sbjct:    1 MSTTKVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQVTVKHQLTTIKREISTMKLIKHPNVVRIYEVMGSKTNIYIVLEYVTGGELFDTIVS-----------DSAMV----------------------------------------NHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNL 165

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Match: A0A0E0MJA5_ORYPU (Non-specific serine/threonine protein kinase OS=Oryza punctata PE=4 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.127e-73
Identity = 135/208 (64.90%), Postives = 143/208 (68.75%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYE-VMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            MS  K+KRRVGKYE+GRTIGEGTFAKVKFAR+TETG+PVA+KILDKEKVLKHKM EQIKREI+TMKLIKHPNVVR+YE VMGSKTKI+IVLEYVTGGELFD IV                                                 NH        GRMREDEARRYF QLIN VDYCHSRGVYHRDLKPENLLLD YGNL
Sbjct:  159 MSTTKVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVVMGSKTKIYIVLEYVTGGELFDTIV-------------------------------------------------NH--------GRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDTYGNL 309

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Match: A0A0E0BNH9_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.987e-69
Identity = 124/195 (63.59%), Postives = 132/195 (67.69%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLK 1854
            MS  K+KRRVGKYE+GRTIGEGTFAKVKFAR+TETG+PVA+KILDKEKVLKHKM EQIKREI+TMKLIKHPNVVR+YEVMGSKTKI+IVLEYVTGGELFD IV                                                 NH        GRMREDEARRYF QLIN VDYCHSRGVYHRDLK
Sbjct:    1 MSTTKVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTIV-------------------------------------------------NH--------GRMREDEARRYFQQLINAVDYCHSRGVYHRDLK 138

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Match: W1PE91_AMBTC (Non-specific serine/threonine protein kinase OS=Amborella trichopoda GN=AMTR_s00018p00244280 PE=4 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 5.791e-64
Identity = 117/207 (56.52%), Postives = 137/207 (66.18%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            MS P  + RVGKYE+GRT+GEG+FAKVKFARN +TG+ VA+K++DKE+VLKHKM EQIKREI+TMKLIKHPNVV+L+EVM SKTKI+IV+E+V GGELFDKI                                                  NH        GR++EDEARRYF QLIN VDYCHSRGVYHRDLKPENLLLD++G L
Sbjct:    1 MSLPGTRTRVGKYELGRTLGEGSFAKVKFARNVDTGDCVAIKVVDKEQVLKHKMVEQIKREISTMKLIKHPNVVQLFEVMASKTKIYIVIEFVEGGELFDKIA-------------------------------------------------NH--------GRLKEDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSFGVL 150

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Match: R0FEN4_9BRAS (Non-specific serine/threonine protein kinase OS=Capsella rubella GN=CARUB_v10000979mg PE=4 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.667e-62
Identity = 120/207 (57.97%), Postives = 137/207 (66.18%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            M++PK++RRVGKYE+G+T+G+GTFAKV+ A +TETGE VALKILDKEKVLKHKMAEQI+REI+TMKLI HPNVVRLYEV+ SKTKI+IVLE+VTGGELFDKIV                                                  H   LK  N R       +YF QLIN VDYCHSRGVYHRDLKPENLLLDA+GNL
Sbjct:    1 MNRPKVQRRVGKYEVGKTLGQGTFAKVRCAVDTETGERVALKILDKEKVLKHKMAEQIRREISTMKLINHPNVVRLYEVLASKTKIYIVLEFVTGGELFDKIV--------------------------------------------------HDGRLKEENAR-------KYFQQLINAVDYCHSRGVYHRDLKPENLLLDAHGNL 150

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Match: A0A0A7LU83_ALBBR (Non-specific serine/threonine protein kinase OS=Albuca bracteata GN=CIPK-4 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.790e-62
Identity = 117/201 (58.21%), Postives = 133/201 (66.17%), Query Frame = 1

Query: 1288 KRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            K RVG+YE+GRT+GEGTFAKVKFA+N ETGE VA+KILDKEKVL+HKM EQIKREI TMKLI+HPN++R++EVM SKTKI+IVLEYVTGGELFDKI                                             SC             GR++EDEAR+YF QLIN VDYCHSRGV+HRDLKPENLLLDA G L
Sbjct:    7 KTRVGRYELGRTLGEGTFAKVKFAKNAETGENVAIKILDKEKVLRHKMIEQIKREITTMKLIRHPNIIRMHEVMASKTKIYIVLEYVTGGELFDKI---------------------------------------------SC------------RGRLKEDEARKYFQQLINAVDYCHSRGVFHRDLKPENLLLDAGGML 150

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Match: W1NUE6_AMBTC (Non-specific serine/threonine protein kinase OS=Amborella trichopoda GN=AMTR_s00092p00095660 PE=4 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.198e-62
Identity = 118/207 (57.00%), Postives = 135/207 (65.22%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            MS    + RVGKYE+GRT+GEGTFAKVKFARN ETG  VA+KILDKEKVL+HKM  QIKREI+TMKLIKHPNV++++EVM SKTKI+IV+E+VTGGELFDKIV                                                 NH        GR++EDEAR+YF QLIN VDYCHSRGVYHRDLKPENLLLD+ G L
Sbjct:    1 MSLQVTRTRVGKYELGRTLGEGTFAKVKFARNVETGNNVAIKILDKEKVLRHKMIGQIKREISTMKLIKHPNVIQMHEVMASKTKIYIVMEFVTGGELFDKIV-------------------------------------------------NH--------GRLKEDEARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDSSGVL 150

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Match: A0A0E0JBR1_ORYNI (Non-specific serine/threonine protein kinase OS=Oryza nivara PE=4 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.767e-61
Identity = 115/207 (55.56%), Postives = 134/207 (64.73%), Query Frame = 1

Query: 1270 MSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            MS    + RVG+YE+GRT+GEGTFAKVKFARN ++GE VA+KILDK+KVLKHKM  QIKREI+TMKLI+HPNV+R++EVM SKTKI+IV+E VTGGELFDKI                                             SC             GR++ED+AR+YF QLIN VDYCHSRGVYHRDLKPENLLLDA G L
Sbjct:    1 MSVSGGRTRVGRYELGRTLGEGTFAKVKFARNADSGENVAIKILDKDKVLKHKMIAQIKREISTMKLIRHPNVIRMHEVMASKTKIYIVMELVTGGELFDKIA--------------------------------------------SC-------------GRLKEDDARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDASGTL 150

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Match: M8BDT7_AEGTA (Non-specific serine/threonine protein kinase OS=Aegilops tauschii GN=F775_07286 PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 3.973e-61
Identity = 120/209 (57.42%), Postives = 142/209 (67.94%), Query Frame = 1

Query: 1264 REMSQPKIKRRVGKYEMGRTIGEGTFAKVKFARNTETGEPVALKILDKEKVLKHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEYVTGGELFDKIVS**YL*YLHIMLDSHRVGGAALICFXXXXXXXXXXXXXREANFRSCISLNHFLILKVNNGRMREDEARRYFHQLINVVDYCHSRGVYHRDLKPENLLLDAYGNL 1890
            R  +  K++RRVGKYE+GRTIGEGTFAKV+FA++TE+G+PVA+KILDK KV KH + EQI+REI TMKLI+HPNVVRL+EVMGSK +IFIVLEYVTGGEL D I                    AA           Y   ++   ++     + H   LK   G ++EDEARRYF QLIN VDYCHSRGVYHRDLK ENLLLD  GNL
Sbjct:  193 RRQASLKVRRRVGKYELGRTIGEGTFAKVRFAKDTESGDPVAIKILDKAKVHKHGLVEQIRREICTMKLIQHPNVVRLHEVMGSKARIFIVLEYVTGGELHDII--------------------AARGSLKEDEARRYFQQLINAVDYCHSRGVYH-RDLKAARGSLKEDEARRYFQQLINAVDYCHSRGVYHRDLKLENLLLDTAGNL 380

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
CIPKQ_ARATH	2.847e-63	57.97	CBL-interacting serine/threonine-protein kinase 26...	[more]
CIPK9_ORYSJ	7.099e-60	55.28	CBL-interacting protein kinase 9 OS=Oryza sativa s...	[more]
CIPK3_ARATH	1.794e-51	91.00	CBL-interacting serine/threonine-protein kinase 3 ...	[more]
CIPKW_ORYSJ	3.047e-51	87.50	CBL-interacting protein kinase 32 OS=Oryza sativa ...	[more]
CIPKX_ORYSJ	1.234e-50	86.54	CBL-interacting protein kinase 33 OS=Oryza sativa ...	[more]
CIPKV_ORYSJ	1.024e-45	76.42	CBL-interacting protein kinase 31 OS=Oryza sativa ...	[more]
CIPKN_ORYSJ	8.233e-42	74.04	CBL-interacting protein kinase 23 OS=Oryza sativa ...	[more]
CIPK8_ORYSJ	2.774e-41	73.96	CBL-interacting protein kinase 8 OS=Oryza sativa s...	[more]
CIPK5_ARATH	7.385e-41	44.12	CBL-interacting serine/threonine-protein kinase 5 ...	[more]
CIPKO_ORYSJ	8.008e-41	44.28	CBL-interacting protein kinase 24 OS=Oryza sativa ...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0093367 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
G2XLC6_ORYGL	1.743e-78	66.67	Non-specific serine/threonine protein kinase OS=Or...	[more]
G2XMN1_ORYGL	7.309e-75	63.43	Non-specific serine/threonine protein kinase OS=Or...	[more]
A0A0E0MJA5_ORYPU	7.127e-73	64.90	Non-specific serine/threonine protein kinase OS=Or...	[more]
A0A0E0BNH9_9ORYZ	3.987e-69	63.59	Uncharacterized protein OS=Oryza glumipatula PE=4 ...	[more]
W1PE91_AMBTC	5.791e-64	56.52	Non-specific serine/threonine protein kinase OS=Am...	[more]
R0FEN4_9BRAS	2.667e-62	57.97	Non-specific serine/threonine protein kinase OS=Ca...	[more]
A0A0A7LU83_ALBBR	2.790e-62	58.21	Non-specific serine/threonine protein kinase OS=Al...	[more]
W1NUE6_AMBTC	3.198e-62	57.00	Non-specific serine/threonine protein kinase OS=Am...	[more]
A0A0E0JBR1_ORYNI	3.767e-61	55.56	Non-specific serine/threonine protein kinase OS=Or...	[more]
M8BDT7_AEGTA	3.973e-61	57.42	Non-specific serine/threonine protein kinase OS=Ae...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000719	Protein kinase domain	SMART	SM00220	serkin_6	coord: 13..104 e-value: 0.0041 score: -92.6
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 13..102 e-value: 2.6E-22 score: 79.3
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 13..104 score: 18.817
None	No IPR available	GENE3D	3.30.200.20		coord: 4..103 e-value: 5.8E-37 score: 126.6
None	No IPR available	PANTHER	PTHR24343	SERINE/THREONINE KINASE	coord: 5..103
None	No IPR available	PANTHER	PTHR24343:SF189	CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3	coord: 5..103
IPR017441	Protein kinase, ATP binding site	PROSITE	PS00107	PROTEIN_KINASE_ATP	coord: 19..42
IPR011009	Protein kinase-like domain	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 9..103

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0093367 ID=g.barbadense_cottongen_reftransV1_0093367; Name=g.barbadense_cottongen_reftransV1_0093367; organism=Gossypium barbadense; type=contig; length=1892bp
CAAAAGCTTGTCTGGTTATAGTCTCAGCTGAGTCTTTTATTTCGGCTTTT
CTTATTTATGTCCGCCTCTTGAACTAACTCAAAAGCCATTTTTCCTTTTT
CCGCTCAGCCTCAAGAAGCTCGTAATTCTTCCTTTCTTATCCACTTCTCT
TCTCAAGTATATCCCTTTTTCTTTTTTCTCCTCCAATAATGATCATTCTT
TCAATCATATACGAATAAATAATTATTCTTTTATTATTTAATTGCTATAT
ATACTACTTAGAATTCTATACTTTCTAGTTTGTAGTGCCGTTATCGAATT
TGCTTCGAAGCTTGTACATTTTCGTACAAAAGAGATTGGATTTTTTACTG
TTGGTTGATGTTTCTTGACCCTTATAGGCCTTAGCTCAGCCTTTTCTGAT
ATCAATTCAACCCCCAAATTTATTTTGCTTTTCTGGGTAATTCTCGAGTT
CCTTAAACCAGCAAAAGCTTTACACTTGATTTTGTCCCTAGTGTGGACGA
TTAGTTTAAATTTCATGGCTTTGGGGGCGTAATGCATGCATTTCTCGCTT
TAAAAAATTTAATTGTTTTTATTATGATGTATTTTTTAATACCAACAAAG
AATTCGTGGTTGTAAGCAAGGGGAAAAGATCTAGGGGGTAATATTTTATG
TAGTAATTCATTTGTTTATGTCAATTTGTTAGCTGTTGATTATTTTATTA
TCTATGATGAGGTTGATACAAAGTACTTTTTTACTCTCTCTCTCTCTTAT
TTAAGCTGAATTTTCCAGATTTCTGCATCATTTGAAAAAAAAATAATTTA
AAGGACATGCCTCTGTACTTTTGAGGTTCTTAGCAAAAAAATCTATTGAG
TGTTAATTGTGAGTAGTTTACTCCATTTGGCTGTTTTATTTTGCCGAGAT
TTTACCTTTTTTTTTCTCGTTTTGATCATAAGTTTATTTTTTTATGTCTG
ATGCCATTTCAATGACAATTACCTTTCATATTCTAGGGATTAGATCAGTT
TTATTGCTTCAAATTGAATTTCCACCAATTTTTCTACTTGAACTGAGATT
CGCATATTCCAGATAATGTTCTTGTGCTATATGTTAATGAGGAGTTTTTA
AAGATTGAATAGTCACTTTTCAACGTTCCTTTTGCTTCATAATTTGGTGT
TTTAAGCCCTTCTTTTTATGATTTGATGCTGTGTGATACTGCAAAATTGA
GTGATAAAGATGCTCGTCTCAGGAACAGGTTTTAAGAGCTTGCAAAAGTG
AAGTAAAGATATAAGAGAAATGAGTCAACCTAAAATTAAGCGGCGCGTGG
GTAAATATGAGATGGGAAGGACAATTGGGGAAGGAACATTTGCTAAAGTG
AAGTTTGCAAGAAATACAGAGACTGGAGAACCTGTGGCACTTAAGATCCT
TGATAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAACAGATCAAGAGGG
AAATAGCAACAATGAAGTTGATAAAGCATCCAAATGTTGTCCGTTTATAC
GAGGTAATGGGAAGCAAGACAAAGATATTTATTGTTTTGGAGTATGTCAC
CGGGGGAGAGCTCTTTGACAAAATTGTAAGTTGATGATATCTGTGATACT
TGCATATTATGTTAGATTCTCATCGTGTTGGTGGAGCTGCACTAATATGT
TTCCTAGTTTCAGTACTGATTTAATATTTGTACCTTGTTTTAAGAGAAGC
TAACTTTAGATCTTGTATATCTTTAAACCATTTCTTAATTCTGAAGGTAA
ACAACGGAAGGATGAGAGAAGATGAGGCACGAAGATATTTCCACCAGCTC
ATTAATGTTGTTGATTACTGCCATAGCAGAGGCGTCTACCATAGGGATCT
TAAGCCTGAAAATTTGCTGTTGGATGCATATGGTAACCTCAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR000719	Prot_kinase_dom
IPR017441	Protein_kinase_ATP_BS
IPR011009	Kinase-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0004672	protein kinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

Search form

g.barbadense_cottongen_reftransV1_0093367, g.barbadense_cottongen_reftransV1_0093367 (contig) Gossypium barbadense

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