g.barbadense_cottongen_reftransV1_0092935, g.barbadense_cottongen_reftransV1_0092935 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092935
Unique Nameg.barbadense_cottongen_reftransV1_0092935
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1925
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.994e-35
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSI 829
            GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR+NLNRRRRRSSLFDITTDSVS+
Sbjct:   94 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSV 166

HSP 2 Score: 51.9878 bits (123), Expect = 3.994e-35
Identity = 35/74 (47.30%), Postives = 41/74 (55.41%), Query Frame = 3 
Query:  345 IMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNA--------------DAGYAS--DDVLHGSGIGRSRERKRGI 518
            IMLFGVRV     RKSVS+N+LSQ++ P  +N               D GYAS  D V H S  G  RERKRG+
Sbjct:   24 IMLFGVRVKVDPMRKSVSLNDLSQYEHPNANNNNNGGDNNESSKVAQDEGYASADDAVQHQSNSG--RERKRGV 95
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BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.661e-21
Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVS 826
            GVPWTEEEHKLFL+GL+K GKGDWR ISRNFV TRTPTQVASHAQKYF+R+ +  + +RR+S+ DITT ++S
Sbjct:  131 GVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLS 202
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BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 6.605e-8
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 2 
Query:  620 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 754
            WT+EEH  FL G+Q  GKG W+ I++ FV TRTPTQ+ SHAQKY+
Sbjct:  379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYY 422
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BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A0A0D2R5A7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G371900 PE=4 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 1.560e-82
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 3 
Query: 1326 FINSTILEEDEVAHQENVSSPQMNGFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA 1733
            FINSTILEEDEVAHQENVSSPQMNGFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA
Sbjct:  171 FINSTILEEDEVAHQENVSSPQMNGFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA 306

HSP 2 Score: 184.496 bits (467), Expect = 2.320e-71
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 3 
Query:  213 MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518
            MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNGSGGSGGGEEKGIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRG+
Sbjct:    1 MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNGSGGSGGGEEKGIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGV 102

HSP 3 Score: 114.39 bits (285), Expect = 2.320e-71
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820
            GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTP QVASHAQKYFLRRNNLNRRRRRSSLFDITTDS
Sbjct:  101 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPIQVASHAQKYFLRRNNLNRRRRRSSLFDITTDS 170
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A0A0B0N943_GOSAR (Transcription factor MYB1R1 OS=Gossypium arboreum GN=F383_15785 PE=4 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.021e-75
Identity = 129/136 (94.85%), Postives = 130/136 (95.59%), Query Frame = 3 
Query: 1326 FINSTILEEDEVAHQENVSSPQMNGFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA 1733
            FINSTILEEDEV HQENVSSPQMNGFSMPTTFPATLSLTDLSVTENN S EN ISRPPSPKANTSSY+I PIPVLP PPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA
Sbjct:  171 FINSTILEEDEVVHQENVSSPQMNGFSMPTTFPATLSLTDLSVTENNYSTENRISRPPSPKANTSSYLIRPIPVLPVPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA 306

HSP 2 Score: 182.57 bits (462), Expect = 1.042e-70
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 3 
Query:  213 MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518
            MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNGSGGSG G EKGIMLFGVRVMEGSFRKSVSMNNLSQFDQP VSNADAGYASDDVLHGSGIGRSRERKRG+
Sbjct:    1 MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNGSGGSGEGGEKGIMLFGVRVMEGSFRKSVSMNNLSQFDQPHVSNADAGYASDDVLHGSGIGRSRERKRGV 102

HSP 3 Score: 114.39 bits (285), Expect = 1.042e-70
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820
            GVPWTEEEHKLFLLGL+KVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITTDS
Sbjct:  101 GVPWTEEEHKLFLLGLKKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITTDS 170
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A0A061E7E9_THECC (Myb-like transcription factor family protein OS=Theobroma cacao GN=TCM_010118 PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.924e-58
Identity = 73/98 (74.49%), Postives = 76/98 (77.55%), Query Frame = 3 
Query:  225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518
            MSRSCS CGNNGHNSRTCGEV  G     +G         IMLFGVRV EGSFRKSVSMNNLSQFDQPQ SNADAGYASDDV+H S  GRSRERKRG+
Sbjct:    1 MSRSCSQCGNNGHNSRTCGEVAGGGGGGENG---------IMLFGVRVTEGSFRKSVSMNNLSQFDQPQDSNADAGYASDDVVHAS--GRSRERKRGV 87

HSP 2 Score: 115.546 bits (288), Expect = 8.924e-58
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820
            GVPWTEEEH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTDS
Sbjct:   86 GVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDS 155

HSP 3 Score: 143.28 bits (360), Expect = 9.689e-35
Identity = 96/148 (64.86%), Postives = 105/148 (70.95%), Query Frame = 3 
Query: 1326 FINSTILEEDEVAHQENVSSP----------QMNGFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQST--AAAHSSTLVVMSNGDNNSIISVA 1733
            F+NSTILEED+V HQENVS P          QM+ F M +TFP TLS   L V   NNS ENL +   SP ANTS  +I PIP+LP PPSSKMADLNL QK   D LPLSLKLSTPSADEQST  AAAHSST   MS+GD+NSIISVA
Sbjct:  156 FMNSTILEEDQV-HQENVSLPLPLPQSQAQAQMSRFPM-STFPVTLSPVVLPVAGENNSMENL-TLGTSPNANTSPKLIRPIPILPVPPSSKMADLNLKQKIPVDPLPLSLKLSTPSADEQSTAAAAAHSSTFQAMSSGDSNSIISVA 300
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BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A5C631_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01050 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.494e-53
Identity = 66/99 (66.67%), Postives = 73/99 (73.74%), Query Frame = 3 
Query:  225 MSRSCSHCGNNGHNSRTCGEVV-AGDASNXXXXXXXXXXXXIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518
            MSRSCS CGNNGHNSRTC E   AG A+N            IMLFGVR+ EG+FRKS SM NLSQ++QPQ SNADAGYASDDV+H S   RSRERKRG+
Sbjct:    1 MSRSCSQCGNNGHNSRTCTESGGAGAAAND-----------IMLFGVRITEGAFRKSASMTNLSQYEQPQDSNADAGYASDDVVHAS--ARSRERKRGV 86

HSP 2 Score: 112.079 bits (279), Expect = 7.494e-53
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820
            GVPWTEEEH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDIT D+
Sbjct:   85 GVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITADT 154

HSP 3 Score: 94.7449 bits (234), Expect = 5.801e-18
Identity = 67/150 (44.67%), Postives = 89/150 (59.33%), Query Frame = 3 
Query: 1326 FINSTILEEDEVAHQENVSSPQMN--------GFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAA--HSSTLVVMSNGDNNS----IISVA 1733
            F+ STILEED+V HQE VS PQ++        GF +PT FP T++   L V  N + +  +++   S +A   + +I PIP+LP PPSSKMADLNLN  +  D LPLSLK S+ ++    +  A  HSS    MS   N+S    IISVA
Sbjct:  155 FMGSTILEEDQV-HQETVSPPQLHSHLNGSAGGFPVPT-FPVTMAPVVLPVASNGSME--ILTLGQSNQAKGPTKLIRPIPILPVPPSSKMADLNLNIPSTADPLPLSLKPSSSTSTSPQSPTATRHSSAFQAMSESFNSSTGDNIISVA 300
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: B9S2H1_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0699450 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.539e-52
Identity = 72/103 (69.90%), Postives = 76/103 (73.79%), Query Frame = 3 
Query:  225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRV-MEG-SFRKSVSMNNLSQFDQPQVSNAD---AGYASDDVLHGSGIGRSRERKRGI 518
            MSRSCS CGNNGHNSRTCGE   G A+          E GIMLFGVRV MEG SFRKSVSMNNLSQ+DQPQ  NAD   AGY SDDV+H S  GRSRERKRG+
Sbjct:    1 MSRSCSQCGNNGHNSRTCGENSGGSAAG---------ESGIMLFGVRVMMEGASFRKSVSMNNLSQYDQPQDPNADVAAAGYESDDVVHAS--GRSRERKRGV 92

HSP 2 Score: 114.005 bits (284), Expect = 1.539e-52
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820
            GVPWTEEEH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTD+
Sbjct:   91 GVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDT 160

HSP 3 Score: 63.929 bits (154), Expect = 1.001e-7
Identity = 55/144 (38.19%), Postives = 74/144 (51.39%), Query Frame = 3 
Query: 1326 FINSTILEEDEVAHQENVSS----PQ---------MNGFSMPTTFPATLSLTDLSVT-ENNNSKENL-----------------ISRP-PSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAE--EDRLPLSLKLSTPSADE 1655
            F+ STI EE  V HQE  ++    PQ         + GF   +TF  +LS   L V  + NNS E+L                 +S P P PK      +I PIP++P   SS++ +LNL+Q +   E+ LPLSLKLSTPS+DE
Sbjct:  161 FLGSTIEEEQVVMHQETATALPLPPQPHLSNNNLGVGGFPK-STFAVSLSPAVLPVKGDINNSMESLSLGPMISIISSSSKAKTLSNPLPPPK------LIRPIPIIPVAASSRIGELNLDQNSPTTEETLPLSLKLSTPSSDE 297
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: W9RHA0_9ROSA (Transcription factor OS=Morus notabilis GN=L484_011012 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.607e-52
Identity = 67/99 (67.68%), Postives = 73/99 (73.74%), Query Frame = 3 
Query:  225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGS-FRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518
            MSR+CS CGNNGHNSRTC E         + G GGG E  IMLFGVRV EGS FRKS SM NLSQ+D+ Q SNAD GYASDDV+H S  GRSRERKRG+
Sbjct:    1 MSRTCSQCGNNGHNSRTCTEACGDGNGAAAAGGGGGGENAIMLFGVRVTEGSSFRKSASMINLSQYDRAQDSNADTGYASDDVVHAS--GRSRERKRGV 97

HSP 2 Score: 114.775 bits (286), Expect = 9.607e-52
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820
            GVPWTEEEH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTD+
Sbjct:   96 GVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITTDT 165

HSP 3 Score: 83.1889 bits (204), Expect = 4.902e-14
Identity = 60/121 (49.59%), Postives = 73/121 (60.33%), Query Frame = 3 
Query: 1413 TTFPATLSLTDLSV-TENNNSKEN--------LISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEE--DRLPLSLKLSTPSADEQST---AAAHSSTLVVMSNGDNNSIISVA 1733
            +TFP TL+   L + T   NS E+        L ++PP P     + +I PIP+ P PPSSKMA+LNLN K+    D LPLSLKLSTPS DE+S+      H ST   MSNGD  SIISVA
Sbjct:  211 STFPMTLAPVVLPIATTAENSSESPALDSCVQLAAKPPPP-----TKLIRPIPLHPIPPSSKMANLNLNSKSPTVADPLPLSLKLSTPS-DEKSSPPPPPPHQSTFQAMSNGD--SIISVA 323
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: V4VGV4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032167mg PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.717e-51
Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 3 
Query:  225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGS--FRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518
            MSRSCS CGNNGHNSRTC E   G +S       G     IMLFGVRV EGS  FRKS+SM+NLSQFDQPQ SNADAGYASDD++H S  GRSRERKRG+
Sbjct:    1 MSRSCSQCGNNGHNSRTCAEAGGGGSSGAGSEENG-----IMLFGVRVTEGSSSFRKSISMDNLSQFDQPQDSNADAGYASDDIVHAS--GRSRERKRGV 93

HSP 2 Score: 110.923 bits (276), Expect = 1.717e-51
Identity = 64/77 (83.12%), Postives = 68/77 (88.31%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSIYKYL 841
            GVPWTE+EH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR N N+RRRRSSLFDIT  S   +  L
Sbjct:   92 GVPWTEDEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRFNQNKRRRRSSLFDITASSTDTFMGL 168

HSP 3 Score: 98.5969 bits (244), Expect = 4.137e-19
Identity = 70/144 (48.61%), Postives = 86/144 (59.72%), Query Frame = 3 
Query: 1344 LEEDEVAHQENVS----SPQMN----GFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKA---EEDRLPLSLKLSTP--SADEQSTAAAHSS-TLVVMSNGDNNSIISVA 1733
            +EE++   QE ++     PQ+N    GF + + +P   S   L VT    S ENL   P S K  TS  +I PIP+ P PPSSK+  LNLNQKA   + D LPLSLKLSTP  S+DEQS    HSS     MS+GD+NSIISVA
Sbjct:  170 MEEEQARQQETITVPLPQPQLNRHPGGFPV-SAYPLKHSAVVLPVT-GQKSMENLTIGP-SNKPRTSPKLIRPIPIHPVPPSSKLGGLNLNQKATHVDVDTLPLSLKLSTPSSSSDEQSAQTPHSSAAFQAMSSGDSNSIISVA 310
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A0A067H574_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021351mg PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.929e-51
Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 3 
Query:  225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGS--FRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518
            MSRSCS CGNNGHNSRTC E   G +S       G     IMLFGVRV EGS  FRKS+SM+NLSQFDQPQ SNADAGYASDD++H S  GRSRERKRG+
Sbjct:    1 MSRSCSQCGNNGHNSRTCAEAGGGGSSGAGSEENG-----IMLFGVRVTEGSSSFRKSISMDNLSQFDQPQDSNADAGYASDDIVHAS--GRSRERKRGV 93

HSP 2 Score: 110.923 bits (276), Expect = 1.929e-51
Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSIYKY 838
            GVPWTE+EH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR N N+RRRRSSLFDIT  S    ++
Sbjct:   92 GVPWTEDEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRFNQNKRRRRSSLFDITASSTDTARH 167

HSP 3 Score: 92.0485 bits (227), Expect = 4.960e-17
Identity = 66/141 (46.81%), Postives = 80/141 (56.74%), Query Frame = 3 
Query: 1353 DEVAHQENVS----SPQMN----GFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKA---EEDRLPLSLKLSTP--SADEQSTAAAHSS-TLVVMSNGDNNSIISVA 1733
            D   HQE ++     PQ+N    GF + + +P   S   L  T   +     I   PS K  TS  +I PIP+ P PPSSK+  LNLNQKA   + D LPLSLKLSTP  S+DEQS    HSS     MS+GD+NSIISVA
Sbjct:  163 DTARHQETITVPLPQPQLNRHPGGFPV-SAYPVKHSAVVLPFTGEKSMGNLTIG--PSNKPRTSPKLIRPIPIHPVPPSSKLGGLNLNQKATHVDVDTLPLSLKLSTPSSSSDEQSAQTPHSSAAFQAMSSGDSNSIISVA 300
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A0A067GVG8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021351mg PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.195e-51
Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 3 
Query:  225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGS--FRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518
            MSRSCS CGNNGHNSRTC E   G +S       G     IMLFGVRV EGS  FRKS+SM+NLSQFDQPQ SNADAGYASDD++H S  GRSRERKRG+
Sbjct:    1 MSRSCSQCGNNGHNSRTCAEAGGGGSSGAGSEENG-----IMLFGVRVTEGSSSFRKSISMDNLSQFDQPQDSNADAGYASDDIVHAS--GRSRERKRGV 93

HSP 2 Score: 110.153 bits (274), Expect = 3.195e-51
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSIY 832
            GVPWTE+EH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR N N+RRRRSSLFDIT  S   +
Sbjct:   92 GVPWTEDEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRFNQNKRRRRSSLFDITASSTDTF 165

HSP 3 Score: 98.2117 bits (243), Expect = 5.290e-19
Identity = 70/150 (46.67%), Postives = 88/150 (58.67%), Query Frame = 3 
Query: 1326 FINSTILEEDEVAHQENVS----SPQMN----GFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKA---EEDRLPLSLKLSTP--SADEQSTAAAHSS-TLVVMSNGDNNSIISVA 1733
            F+ ST +EE++  HQE ++     PQ+N    GF + + +P   S   L  T   +     I   PS K  TS  +I PIP+ P PPSSK+  LNLNQKA   + D LPLSLKLSTP  S+DEQS    HSS     MS+GD+NSIISVA
Sbjct:  165 FMGST-MEEEQARHQETITVPLPQPQLNRHPGGFPV-SAYPVKHSAVVLPFTGEKSMGNLTIG--PSNKPRTSPKLIRPIPIHPVPPSSKLGGLNLNQKATHVDVDTLPLSLKLSTPSSSSDEQSAQTPHSSAAFQAMSSGDSNSIISVA 310
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BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: V4TEN6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032167mg PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.341e-51
Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 3 
Query:  225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGS--FRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518
            MSRSCS CGNNGHNSRTC E   G +S       G     IMLFGVRV EGS  FRKS+SM+NLSQFDQPQ SNADAGYASDD++H S  GRSRERKRG+
Sbjct:    1 MSRSCSQCGNNGHNSRTCAEAGGGGSSGAGSEENG-----IMLFGVRVTEGSSSFRKSISMDNLSQFDQPQDSNADAGYASDDIVHAS--GRSRERKRGV 93

HSP 2 Score: 109.383 bits (272), Expect = 4.341e-51
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 2 
Query:  611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSV 823
            GVPWTE+EH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR N N+RRRRSSLFDIT  S 
Sbjct:   92 GVPWTEDEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRFNQNKRRRRSSLFDITASST 162

HSP 3 Score: 101.293 bits (251), Expect = 4.892e-20
Identity = 74/152 (48.68%), Postives = 91/152 (59.87%), Query Frame = 3 
Query: 1320 LQFINSTILEEDEVAHQENVS----SPQMN----GFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKA---EEDRLPLSLKLSTP--SADEQSTAAAHSS-TLVVMSNGDNNSIISVA 1733
            LQF+  T +EE++   QE ++     PQ+N    GF + + +P   S   L VT    S ENL   P S K  TS  +I PIP+ P PPSSK+  LNLNQKA   + D LPLSLKLSTP  S+DEQS    HSS     MS+GD+NSIISVA
Sbjct:  166 LQFMGLT-MEEEQARQQETITVPLPQPQLNRHPGGFPV-SAYPLKHSAVVLPVT-GQKSMENLTIGP-SNKPRTSPKLIRPIPIHPVPPSSKLGGLNLNQKATHVDVDTLPLSLKLSTPSSSSDEQSAQTPHSSAAFQAMSSGDSNSIISVA 313
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
MY1R1_SOLTU3.994e-3597.26Transcription factor MYB1R1 OS=Solanum tuberosum P... [more]
DIV_ANTMA6.661e-2172.22Transcription factor DIVARICATA OS=Antirrhinum maj... [more]
MYBJ_DICDI6.605e-862.22Myb-like protein J OS=Dictyostelium discoideum GN=... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2R5A7_GOSRA1.560e-82100.00Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0N943_GOSAR2.021e-7594.85Transcription factor MYB1R1 OS=Gossypium arboreum ... [more]
A0A061E7E9_THECC8.924e-5874.49Myb-like transcription factor family protein OS=Th... [more]
A5C631_VITVI7.494e-5366.67Putative uncharacterized protein OS=Vitis vinifera... [more]
B9S2H1_RICCO1.539e-5269.90Transcription factor, putative OS=Ricinus communis... [more]
W9RHA0_9ROSA9.607e-5267.68Transcription factor OS=Morus notabilis GN=L484_01... [more]
V4VGV4_9ROSI1.717e-5169.00Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067H574_CITSI1.929e-5169.00Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A067GVG8_CITSI3.195e-5169.00Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4TEN6_9ROSI4.341e-5169.00Uncharacterized protein OS=Citrus clementina GN=CI... [more]

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Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092935 ID=g.barbadense_cottongen_reftransV1_0092935; Name=g.barbadense_cottongen_reftransV1_0092935; organism=Gossypium barbadense; type=contig; length=1925bp
GCACATTGGAGGGTCCTGATTCATGATCTAGAAAATCAAGATTTTATGGT
AGATATTGAACTTCAGTAAGACATGATGTAGCTTTCAGTGAGTCCTTGTA
AAGCACTGGTTAATTTGCACTATATATGAACCACAGCATCCCTTTAGTTA
TCTTTTCTTATATTCCATTTTTCTTCTTCTTCATTTAGGATTCAACGATT
CTCTTCCCTTTCATGACCACGAGTATGTCTCGTAGCTGCTCTCACTGTGG
AAACAACGGCCACAACTCTCGTACGTGCGGTGAAGTTGTTGCCGGTGATG
CAAGCAATGGCAGCGGTGGAAGTGGAGGAGGAGAAGAGAAGGGTATCATG
TTATTCGGTGTTCGAGTCATGGAAGGGTCGTTCAGGAAAAGTGTTAGCAT
GAATAATCTTTCTCAGTTCGATCAACCTCAGGTTTCTAACGCCGATGCTG
GCTATGCTTCTGATGACGTTCTTCATGGATCTGGAATAGGAAGAAGCCGT
GAACGCAAGAGAGGTATAATAATTCAAATATTCATGATCGAATTACATAT
TAATGAATAGATTAATGTTGATTTTTTAGTTTTTATTTTGAAATTTTGAT
TTTGTTTATAGGTGTACCATGGACGGAAGAGGAACATAAATTATTTTTAT
TGGGGTTGCAAAAAGTAGGGAAAGGGGATTGGAGAGGAATTTCAAGAAAT
TTTGTGAAGACACGTACACCTACCCAAGTGGCTAGTCATGCTCAAAAGTA
TTTTCTTAGGAGAAATAACTTGAATAGGAGGCGTCGTAGATCTAGTCTTT
TTGATATAACAACTGATTCGGTAAGCATCTATAAATATTTATTTAAATTT
GGTTTTTGTTATTAATTCTAAACTTGTCAATGAGTCGGGTCAAACCCTAA
CAAAATTTTAGATTCATTTGATAGGTCCAGGCTTGAACAAAAAATGGGCC
TAAACTTTTGCCAAAACTCAATTCGGATTATAAATGTTAAACTCGAGCAC
GGCTTAACCTGTATTCGAGCCCAAAAACCTTACGACTTAGCTCGTATTCA
GACCCTAACAAAAATAGTGGAAAAACAACAGTAAAATAGTAAGTTTTTTT
TTTACCAATTCGGGCCGAACTCTAATCAAAAAATCCTACCCGAGGCTTAA
CTCATTTTCTGAACTGGTCTTATTTTTTGCTCAAGCTCATTTTTCGAGTT
TATATTTTTATCTAAACCCTCCTATTTTTTAGGCGGATTTTCAACCCGAC
CCATGGATAGGTATCATATTCAATCCTACGGTTCATAAATTTTAATATAT
TTGATTTTCGTGATGAATCCTGCAGTTCATAAATTCGACCATATTGGAAG
AAGATGAAGTCGCCCATCAAGAAAACGTTTCGTCACCACAGATGAATGGA
TTTTCTATGCCGACAACGTTTCCGGCAACTCTAAGTTTGACTGATTTATC
AGTAACAGAAAATAATAACTCGAAGGAGAATCTCATATCAAGGCCGCCGA
GCCCCAAAGCGAACACCTCTTCTTATGTTATCTGTCCAATACCGGTTCTT
CCCGCTCCTCCATCATCGAAAATGGCTGATCTTAATTTAAACCAGAAAGC
CGAAGAAGACCGTTTACCTCTATCGCTAAAACTCTCGACACCATCCGCCG
ATGAGCAATCAACAGCAGCGGCACACTCGTCTACTCTCGTCGTCATGTCA
AATGGGGATAACAATAGCATCATCAGCGTTGCTTGAAAATTAAATGAAGT
AAATAATTAGGTGAAAAAATTATTGGAGTATTTGGTAATTAGGTGAAATT
CCTTGTTTTGTACAGCATAATTATTACTGAGATTGCATTAGATTGAAAAA
AATTATTAGACTGTTGGGTAATTAGGTGAAATTCCTTGTTTTGTACAGCA
TAATTATTACTGAGATTGCATTAGA
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