g.barbadense_cottongen_reftransV1_0092930, g.barbadense_cottongen_reftransV1_0092930 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: A0A0B0PMF4_GOSAR (INO80 complex subunit B OS=Gossypium arboreum GN=F383_10249 PE=4 SV=1) HSP 1 Score: 723.005 bits (1865), Expect = 0.000e+0 Identity = 442/447 (98.88%), Postives = 443/447 (99.11%), Query Frame = -2 Query: 735 MEESGSRFNGANNAVXXXXXXXXXXPDSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 2075 MEE GSRFNGANNAVRKKRSSRRPRPDSLSYTESQNHSPLSSTPPSDDVSKVSSDENA V+ANSKRKEFNLNQHVSRISPDIGFE DKSHKRKKQDGGFNAFYDNEPGRSGSNSKRSSKGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESKVKKVKLKVGGVTRTIHANSTVNGLPGTGSYARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQSSKDASSAPGSSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESE Sbjct: 1 MEELGSRFNGANNAVRKKRSSRRPRPDSLSYTESQNHSPLSSTPPSDDVSKVSSDENAVVNANSKRKEFNLNQHVSRISPDIGFEVDKSHKRKKQDGGFNAFYDNEPGRSGSNSKRSSKGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESKVKKVKLKVGGVTRTIHANSTVNGLPGTGSYARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQSSKDASSAPGSSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEA 447 HSP 2 Score: 214.157 bits (544), Expect = 0.000e+0 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = -3 Query: 293 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 643 AEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFP IFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE Sbjct: 447 AEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPSIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 563
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: A0A0D2PZ24_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G144600 PE=4 SV=1) HSP 1 Score: 721.079 bits (1860), Expect = 0.000e+0 Identity = 438/447 (97.99%), Postives = 442/447 (98.88%), Query Frame = -2 Query: 735 MEESGSRFNGANNAVXXXXXXXXXXPDSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 2075 MEESGSRFNGANNAVRKKRSSRRPRPDSLSYTESQNHSPLSSTPPSDDVSKVSSDENAGVDA+SKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFN FYDNEPGRSGSNSKRSSKGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESKVKKVKLKVGGVTRTIHANSTVNGLPGTGS ARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRK+KRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVS +ENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPV+DSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQSSKDASSAP SSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESE Sbjct: 1 MEESGSRFNGANNAVRKKRSSRRPRPDSLSYTESQNHSPLSSTPPSDDVSKVSSDENAGVDASSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNVFYDNEPGRSGSNSKRSSKGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESKVKKVKLKVGGVTRTIHANSTVNGLPGTGSSARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKNKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSIIENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVTDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQSSKDASSAPASSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEA 447 HSP 2 Score: 118.627 bits (296), Expect = 1.382e-24 Identity = 72/74 (97.30%), Postives = 72/74 (97.30%), Query Frame = -3 Query: 422 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSY 643 AEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFP IFNSKPS Y Sbjct: 447 AEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPSIFNSKPSRY 520
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: A0A0D2QQH9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G144600 PE=4 SV=1) HSP 1 Score: 721.079 bits (1860), Expect = 0.000e+0 Identity = 438/447 (97.99%), Postives = 442/447 (98.88%), Query Frame = -2 Query: 735 MEESGSRFNGANNAVXXXXXXXXXXPDSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 2075 MEESGSRFNGANNAVRKKRSSRRPRPDSLSYTESQNHSPLSSTPPSDDVSKVSSDENAGVDA+SKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFN FYDNEPGRSGSNSKRSSKGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESKVKKVKLKVGGVTRTIHANSTVNGLPGTGS ARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRK+KRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVS +ENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPV+DSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQSSKDASSAP SSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESE Sbjct: 1 MEESGSRFNGANNAVRKKRSSRRPRPDSLSYTESQNHSPLSSTPPSDDVSKVSSDENAGVDASSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNVFYDNEPGRSGSNSKRSSKGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESKVKKVKLKVGGVTRTIHANSTVNGLPGTGSSARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKNKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSIIENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVTDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQSSKDASSAPASSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEA 447 HSP 2 Score: 214.157 bits (544), Expect = 0.000e+0 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = -3 Query: 293 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 643 AEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFP IFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE Sbjct: 447 AEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPSIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 563
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: A0A0D2PRG5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G144600 PE=4 SV=1) HSP 1 Score: 716.842 bits (1849), Expect = 0.000e+0 Identity = 438/448 (97.77%), Postives = 442/448 (98.66%), Query Frame = -2 Query: 735 MEESGSRFNGANNAVXXXXXXXXXXPDSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYARKNSLQ-GSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 2075 MEESGSRFNGANNAVRKKRSSRRPRPDSLSYTESQNHSPLSSTPPSDDVSKVSSDENAGVDA+SKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFN FYDNEPGRSGSNSKRSSKGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESKVKKVKLKVGGVTRTIHANSTVNGLPGTGS ARKNSLQ GSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRK+KRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVS +ENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPV+DSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQSSKDASSAP SSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESE Sbjct: 1 MEESGSRFNGANNAVRKKRSSRRPRPDSLSYTESQNHSPLSSTPPSDDVSKVSSDENAGVDASSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNVFYDNEPGRSGSNSKRSSKGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESKVKKVKLKVGGVTRTIHANSTVNGLPGTGSSARKNSLQVGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKNKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSIIENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVTDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQSSKDASSAPASSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEA 448 HSP 2 Score: 214.157 bits (544), Expect = 0.000e+0 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = -3 Query: 293 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 643 AEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFP IFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE Sbjct: 448 AEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPSIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 564
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: A0A0D2LYT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G144600 PE=4 SV=1) HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0 Identity = 404/447 (90.38%), Postives = 410/447 (91.72%), Query Frame = -2 Query: 735 MEESGSRFNGANNAVXXXXXXXXXXPDSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 2075 MEESGSRFNGANNAVRKKRSSRRPRPDSLSYTESQNHSPLSSTPPSDDVSKVSSDENAGVDA+SKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFN FYDNEPGRSGSNSKRSSKGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESK +K L+GSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRK+KRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVS +ENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPV+DSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQSSKDASSAP SSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESE Sbjct: 1 MEESGSRFNGANNAVRKKRSSRRPRPDSLSYTESQNHSPLSSTPPSDDVSKVSSDENAGVDASSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNVFYDNEPGRSGSNSKRSSKGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESK------------------------------VKKVKLKGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKNKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSIIENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVTDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQSSKDASSAPASSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEA 417 HSP 2 Score: 214.157 bits (544), Expect = 0.000e+0 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = -3 Query: 293 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 643 AEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFP IFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE Sbjct: 417 AEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPSIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 533
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: A0A061DZ49_THECC (HIT zinc finger,PAPA-1-like conserved region isoform 1 OS=Theobroma cacao GN=TCM_004823 PE=4 SV=1) HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0 Identity = 368/459 (80.17%), Postives = 404/459 (88.02%), Query Frame = -2 Query: 735 MEE-SGSRFNGANNAVXXXXXXXXXXP--DSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEI--------QSSTQEAVIDNNESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYARKNSLQGSSNDGHSPPG-RSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 2075 MEE SG+RF+G NNAVRKKR+ RP DS S+ ESQ+HSPLSSTPPSDDVSKVSSDENAG DANSKRKEFNLNQ V ISP +G EG+K++KRKK+DGGFNAFY+NEPGRSGSN+KRSS+GVLAPANWKS++K KEWS ESR+ +I QSS Q AVID NESKVKKVKLKVGG+TRTIHANS NG+PG+GS RKN+LQGS+++GHSPP RSGLQGVPWKDFS+GGF GKE SLMGKTSGKN SGKQGD AG VRKSKR PKRR+LDG+F EDD D+EIRYLE+LKTSKISPAYKEDD E GKKQKKLSRVSN ENFG+S S+KDEKRKHRSDR+S DTDYEEEDEPVSDSELEGKKK+KQRKESV+ ME+KRE+TLTTRQRALQSSKDASSAPGSSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKA RESE Sbjct: 1 MEEFSGTRFDGMNNAVRKKRTQTSRRPRPDSQSFAESQDHSPLSSTPPSDDVSKVSSDENAGGDANSKRKEFNLNQCV-WISPAVGVEGEKTNKRKKEDGGFNAFYNNEPGRSGSNNKRSSEGVLAPANWKSTSKAKEWSVSESRNVDIYGGRNGEFQSSVQGAVIDGNESKVKKVKLKVGGITRTIHANSAANGMPGSGSSTRKNNLQGSTDEGHSPPDKRSGLQGVPWKDFSKGGFNFGKEDSLMGKTSGKNISGKQGDQAGLVRKSKRVPKRRVLDGDFGEDDEDEEIRYLERLKTSKISPAYKEDD-ESGKKQKKLSRVSNPENFGSSRSSKDEKRKHRSDRISGDTDYEEEDEPVSDSELEGKKKKKQRKESVDTLMENKREMTLTTRQRALQSSKDASSAPGSSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKAARESEA 457 HSP 2 Score: 187.963 bits (476), Expect = 0.000e+0 Identity = 101/117 (86.32%), Postives = 109/117 (93.16%), Query Frame = -3 Query: 293 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 643 AEAIRKILGQDSSRKKREEK+KKRQEE+AQ KA AEMLASNT+RLVMGP GTTVTFPRD+GFP +F+SKPSSYP PRENCAGPSC NPYKYRDSKSKLPLCSLQCYKAIQ+Q +AE Sbjct: 457 AEAIRKILGQDSSRKKREEKMKKRQEELAQGKAANAEMLASNTVRLVMGPTGTTVTFPRDMGFPSLFDSKPSSYPPPRENCAGPSCNNPYKYRDSKSKLPLCSLQCYKAIQEQLLAE 573
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: A0A061DRF0_THECC (HIT zinc finger,PAPA-1-like conserved region isoform 3 OS=Theobroma cacao GN=TCM_004823 PE=4 SV=1) HSP 1 Score: 492.656 bits (1267), Expect = 3.283e-162 Identity = 338/432 (78.24%), Postives = 377/432 (87.27%), Query Frame = -2 Query: 819 MEE-SGSRFNGANNAVXXXXXXXXXXP--DSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEI--------QSSTQEAVIDNNESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYARKNSLQGSSNDGHSPPG-RSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQK-EKLS 2075 MEE SG+RF+G NNAVRKKR+ RP DS S+ ESQ+HSPLSSTPPSDDVSKVSSDENAG DANSKRKEFNLNQ V ISP +G EG+K++KRKK+DGGFNAFY+NEPGRSGSN+KRSS+GVLAPANWKS++K KEWS ESR+ +I QSS Q AVID NESKVKKVKLKVGG+TRTIHANS NG+PG+GS RKN+LQGS+++GHSPP RSGLQGVPWKDFS+GGF GKE SLMGKTSGKN SGKQGD AG VRKSKR PKRR+LDG+F EDD D+EIRYLE+LKTSKISPAYKEDD E GKKQKKLSRVSN ENFG+S S+KDEKRKHRSDR+S DTDYEEEDEPVSDSELEGKKK+KQRKESV+ ME+KRE+TLTTRQRALQSSKDASSAPGSSLIEFPNGLPPAPSR++ +KLS Sbjct: 1 MEEFSGTRFDGMNNAVRKKRTQTSRRPRPDSQSFAESQDHSPLSSTPPSDDVSKVSSDENAGGDANSKRKEFNLNQCV-WISPAVGVEGEKTNKRKKEDGGFNAFYNNEPGRSGSNNKRSSEGVLAPANWKSTSKAKEWSVSESRNVDIYGGRNGEFQSSVQGAVIDGNESKVKKVKLKVGGITRTIHANSAANGMPGSGSSTRKNNLQGSTDEGHSPPDKRSGLQGVPWKDFSKGGFNFGKEDSLMGKTSGKNISGKQGDQAGLVRKSKRVPKRRVLDGDFGEDDEDEEIRYLERLKTSKISPAYKEDD-ESGKKQKKLSRVSNPENFGSSRSSKDEKRKHRSDRISGDTDYEEEDEPVSDSELEGKKKKKQRKESVDTLMENKREMTLTTRQRALQSSKDASSAPGSSLIEFPNGLPPAPSRRRNFQKLS 430
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: M5W6G0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003322mg PE=4 SV=1) HSP 1 Score: 373.244 bits (957), Expect = 1.480e-140 Identity = 272/443 (61.40%), Postives = 330/443 (74.49%), Query Frame = -2 Query: 735 DSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEI-------QSSTQEAVIDN--NESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYAR------------KNSLQGSSNDGHSPPGR-SGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 1997 DS Y E + S LSS PSDD SKVSSDENAG DANSKRKE +LN+ ++R+S +G G+K HK +DG FN+FY+NEPGR+G N+KRSS+GVLAPANWKS++ K+ ESR A+ ST+ + +D NE+KVKKVKLKVGGVTRTI ANS NG GS + K +L +S+D HSP + SGL+G+PWKDFS+ GF LG++ MG+ SGKN SGK+GD + VRKSKR PKRR+LDGEF +D+ DDEIRYLEKLKTSK++ Y+E+D+E KK +KLS VSN +N G S KD K+K R+DR S DTDYEE+++ +SD ELEGKK KQ+KESV+ M+ K+E+TLTTRQRALQSSKD SS+PGSSLIEFPNGLPPAPSRKQK KLS+VEQQLKKAEAAQRRRMQVEKA RESE Sbjct: 31 DSQPYNELHDQSSLSSATPSDDQSKVSSDENAGCDANSKRKECSLNECMARVSSAVG-NGEKPHKNDSKDGEFNSFYNNEPGRNGINNKRSSEGVLAPANWKSTSIMKDGLISESRSADAFDGMNGESPSTRLSGLDGFGNENKVKKVKLKVGGVTRTIQANSAFNGTAEGGSSTKTSRLSDVSRQRQKPNLPENSDDNHSPSDKKSGLKGIPWKDFSRSGFSLGRDNCSMGRISGKNTSGKEGDRSEPVRKSKRVPKRRVLDGEFGDDEEDDEIRYLEKLKTSKVTAGYRENDEESSKKHRKLSAVSNSDNAGASRLGKDLKKKSRTDRASGDTDYEEDEDSLSDGELEGKK--KQKKESVDSLMDGKKEMTLTTRQRALQSSKDVSSSPGSSLIEFPNGLPPAPSRKQKGKLSDVEQQLKKAEAAQRRRMQVEKAARESEA 470 HSP 2 Score: 157.147 bits (396), Expect = 1.480e-140 Identity = 88/116 (75.86%), Postives = 97/116 (83.62%), Query Frame = -3 Query: 296 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMA 643 AEAIRKILGQDSSRKKRE+KIKKRQEE+AQEKA L SN+IR VMGP GT V F D+G P +F+SKP SYP PRENCAGPSC NPYKYRDSKSKLPLCSL+CYKAIQ++ A Sbjct: 470 AEAIRKILGQDSSRKKREDKIKKRQEELAQEKAANMLTLPSNSIRYVMGPTGTVVIFSNDMGLPSLFDSKPCSYPPPRENCAGPSCTNPYKYRDSKSKLPLCSLKCYKAIQEKMQA 585
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: K7KGE4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 352.443 bits (903), Expect = 5.237e-136 Identity = 280/467 (59.96%), Postives = 330/467 (70.66%), Query Frame = -2 Query: 735 GSRFNGANNAVXXXXXXXXXXP--DSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVID-----------NNESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYARKNS---------LQGSSNDGHSPPG-RSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLL-DGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 2063 G++F+G +NAVR+KRS RP DS +E Q SPLSSTP D S EN G DANSKRKEFNLN VS+ S G E +KSHK+ K+DGGF+ FY NEP RSGSN+KR S+GVLAPANWK S+K K+ + E R+A++ + NE++VKKVKLKVGGVTRTI ANS NG G+G+ + S Q +S+D +SP RS LQGVPWKDFS+GGF LGKE SLMGK SGKN + K GD + VRKSKR PKRR+L +DD DDEIRYLEKLKTSK+S Y+ D++E KK +KLS VSN+EN S KD K++ RSDRV EDTDYE+EDE SD ELE KKK+KQRKESV+ M+SKRE+TLTTRQRALQ S +SA +S+IEFPNGLPPAP RKQKEKLSEV+QQLKKAEAAQRRRMQVEKA RESE Sbjct: 6 GTQFDGLSNAVRRKRSQTSRRPRPDSQHASEGQELSPLSSTPSEDAGKASSD-ENVGYDANSKRKEFNLNHCVSQTSSGTGAEDEKSHKKSKKDGGFHTFYSNEPVRSGSNNKRCSEGVLAPANWKGSSKTKDSLDSELRNADLYGGRNPESMSLAQFGGSQDGLGNENRVKKVKLKVGGVTRTIQANSATNGASGSGTTMKSRSSDASRPRQKQQSNSDDNNSPSDKRSRLQGVPWKDFSRGGFGLGKEESLMGKISGKNTTSKLGDKSEPVRKSKRVPKRRVLDGEFGDDDDEDDEIRYLEKLKTSKVSAVYR-DEEELNKKHRKLSSVSNLEN-AAPRSGKDGKKRSRSDRVYEDTDYEDEDESGSDGELEDKKKKKQRKESVDVLMDSKREMTLTTRQRALQ-SSKDASASSASVIEFPNGLPPAPPRKQKEKLSEVDQQLKKAEAAQRRRMQVEKAARESEA 468 HSP 2 Score: 162.925 bits (411), Expect = 5.237e-136 Identity = 92/117 (78.63%), Postives = 100/117 (85.47%), Query Frame = -3 Query: 293 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 643 AEAIRKILGQDSSRKKREEKIKKRQEE+AQE+A A MLASNTIR MGP GT VTF ++G P I NSKP SYP PRE CAGPSC NPYKYRDSKSKLPLCSLQCYKA+Q++ +AE Sbjct: 468 AEAIRKILGQDSSRKKREEKIKKRQEELAQERAANALMLASNTIRYTMGPTGTFVTFSEEMGLPSILNSKPVSYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAVQEKVVAE 584
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: W9QMD5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009737 PE=4 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 4.226e-135 Identity = 276/475 (58.11%), Postives = 346/475 (72.84%), Query Frame = -2 Query: 735 MEESG--SRFNGANNAVXXXXXXXXXXP--DSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEI--------QSSTQEAVIDN--NESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYA-------------RKNSLQGSSNDG-HSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 2075 MEE G +RF+G N VRKKRS RP DS ++ E+ + SP+SSTPPSDDV+K SSDENAG D+NS RKEF+LNQ +S++S G R ++DGGFN ++ NEPGRSGSN+KRSS+GVLAPANWK S+ K+ E ESR A++ SS Q ++D NE+KVKKVKLKVGGVTRTI ANS NG+ G + +K+S+Q S++ S RSGLQG+PWKDFS+ GF + ++ SLMGK SGK++SG++GD + VRKSKR PKRR+LDG+ +D+ DDEIRYLEKLKTSK++P Y+EDD+EP KK +KLS VSN+E G S SAKD K+K R DR+S DTDYEE++E KK++KQRKE+V+ M+ KRE+TLTTRQRALQ S +S G+SLIEFPNGLPPAP R+QKEKL++VEQQLKKAEAAQRRR+QVEKANRE+E Sbjct: 1 MEEFGVAARFDGIGNTVRKKRSQTCRRPRPDSQTHVENNDESPMSSTPPSDDVNKASSDENAGYDSNSNRKEFSLNQCMSKVSSAAG--------RDRKDGGFNLYHSNEPGRSGSNNKRSSEGVLAPANWKGSSTGKDGVESESRGADVLSGRNGESSSSRQSVMLDGFGNENKVKKVKLKVGGVTRTIQANSASNGMSGGTGSSSKSSRASDASRPRQKHSIQADSDEYISSSDKRSGLQGIPWKDFSRAGFSIRRDDSLMGKASGKSSSGREGDKSEPVRKSKRVPKRRVLDGD-FDDEEDDEIRYLEKLKTSKVAPGYREDDEEPSKKHRKLSVVSNIEIGGPSRSAKDGKKKLRLDRLSGDTDYEEDEESSDGEIDGKKKRKKQRKETVDSLMDGKREMTLTTRQRALQ-SSKDASTSGTSLIEFPNGLPPAPPRRQKEKLTDVEQQLKKAEAAQRRRLQVEKANRETEA 465 HSP 2 Score: 177.948 bits (450), Expect = 4.226e-135 Identity = 97/117 (82.91%), Postives = 105/117 (89.74%), Query Frame = -3 Query: 293 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 643 AEAIRKILGQDSSRKKRE+KIKKRQEE+AQEKA A +LASNTIR VMGP GT VTFP ++GFP IFNSKPSSYP PRENCAGP C NPYKYRDSKSKLPLCSLQCYKAIQ++ +AE Sbjct: 465 AEAIRKILGQDSSRKKREDKIKKRQEELAQEKAANALLLASNTIRWVMGPTGTVVTFPNEMGFPSIFNSKPSSYPPPRENCAGPLCSNPYKYRDSKSKLPLCSLQCYKAIQEKMLAE 581 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092930 ID=g.barbadense_cottongen_reftransV1_0092930; Name=g.barbadense_cottongen_reftransV1_0092930; organism=Gossypium barbadense; type=contig; length=2655bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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