g.barbadense_cottongen_reftransV1_0092930, g.barbadense_cottongen_reftransV1_0092930 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092930
Unique Nameg.barbadense_cottongen_reftransV1_0092930
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2655
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: A0A0A0K5U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407730 PE=4 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 3.708e-121
Identity = 234/412 (56.80%), Postives = 288/412 (69.90%), Query Frame = -2
Query:  735 ENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRD---------AEIQSSTQEAVIDN---NESXXXXXXXXXXXVTRTIHANSTVNGL------PGTGSYAR-KNSLQGSSNDGHSPP-GRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 1910
            EN G D    RKE +LNQ VSR S   G E +   KR K+DG F ++Y +EPGRS +++KRSS+GVLAPANW+S++K  +  E ES            E  SS Q+ +      N++KVKKVKL+VGGVTRTI ANS  NG       P  G   + K++ Q + N  HSP   R GL GVPW+DFS+GGF L KE +L GK  G+N++GK G  A T+RKSKRA K+R+LD    +DD+DDEIRYLEKL+TSK    Y++D +EP KKQ+KLS +S++EN+G S      K K RSD  S+D DYEE++E  SD + +G  K KQRKES++  ME KRE+TLTTRQRALQSSK+ASSA G SLIEFPNGLPPAP RKQKEKL++VEQQLKKAEAAQRRRMQVEKA RESE 
Sbjct:   58 ENGGGDGTPGRKELSLNQCVSRGSSASGPESEHFLKRSKKDGSFGSYYRSEPGRSANDNKRSSEGVLAPANWRSTSKVSDGMESESSSIDPYGGRYGGESSSSGQKGLYVEELANDNKVKKVKLRVGGVTRTIQANSPPNGTSKGNSQPSDGHRQQHKHNFQENFNGNHSPSERRGGLHGVPWRDFSRGGFGLEKEETLTGKMPGRNSAGKHG--AETLRKSKRASKKRVLD-GDFDDDDDDEIRYLEKLRTSKAYAGYRDDGEEPSKKQRKLSSISSMENYGAS------KHKVRSDIASDDKDYEEDEESASDIDADGNHK-KQRKESIDTLMEGKREMTLTTRQRALQSSKEASSARGGSLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEA 459          

HSP 2 Score: 166.007 bits (419), Expect = 3.708e-121
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = -3
Query:  305 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQ 643
            AEAIRKILGQDSSRKKRE+K+KKRQEE+AQEKA  A+ L SNTIR VMGP+GT VTFP D+GFP IF S+P SYP  RENCAGPSC NPYKYRDSKSKLPLCSL CYKAIQ+Q
Sbjct:  459 AEAIRKILGQDSSRKKREDKVKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFPNDMGFPSIFESRPCSYPPLRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQ 571          
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: B9I9I0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s11470g PE=4 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 7.762e-111
Identity = 233/432 (53.94%), Postives = 282/432 (65.28%), Query Frame = -2
Query:  735 DSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESXXXXXXXXXXXVTRTIHANSTVNGLPGT-------GSYARKNSLQGSSNDGHSPPGRSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDD----DEPGKKQKKLSRVSNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 1997
            DS ++T++ + S LS +PPSDD+SK SSDENA    N +RKEF LNQ V              H R+       +  +N+          S +G LAPANW+S +K KE  ++ESR A +         + NESK KKVK KVG VT TI+ANST NG+P T        S  R+  +    +D    PG   LQGVPWK+FS+GGF LGKE  LMGKTSGKN +GKQG+     RK+KRAPKR +LDGEF EDD+DDEIRYLEKLK  K+   +KEDD    DE  KKQ+KLS + ++   G S   KD K+  RSD+  ED D  EE+EP+SD E  G KK KQ+KE VE   + KRE+TLT RQRALQSSKD SS P ++LIEFPNGLPPAPS+KQKEKL+EVEQQ KKAEAAQRRR+QVEKA RESE 
Sbjct:   29 DSQTFTDNYDRSSLSISPPSDDMSKASSDENAD---NCRRKEFGLNQSV--------------HPRR-------SVVNNK---------TSREGALAPANWRSKSKLKECMDVESRTANMYCGR-----NGNESKFKKVKFKVGDVTHTINANSTTNGVPSTKNPRFSDTSNTRQKLISHLISDLIIEPG---LQGVPWKEFSRGGFSLGKEDFLMGKTSGKNTAGKQGNKYE--RKNKRAPKRHVLDGEFGEDDDDDEIRYLEKLKL-KVPSGHKEDDGNDDDESSKKQRKLSTLGSI---GASRLVKDGKKISRSDQAPEDED-YEEEEPLSDGEFAGSKK-KQKKEYVESLTDGKRELTLTKRQRALQSSKDGSSVPDANLIEFPNGLPPAPSKKQKEKLTEVEQQSKKAEAAQRRRLQVEKAARESEA 411          

HSP 2 Score: 169.474 bits (428), Expect = 7.762e-111
Identity = 93/117 (79.49%), Postives = 101/117 (86.32%), Query Frame = -3
Query:  293 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMAE 643
            AEAIRKILGQDSSRKKREEK+KKR EE+AQEKA  AEM AS+TIR VMGP GT VTFP+++G P IF+SKP SYP PRE CAGPSC NPYKYRDSKSKLPLCSLQCYKAIQ+Q   E
Sbjct:  411 AEAIRKILGQDSSRKKREEKVKKRLEELAQEKATNAEMHASSTIRWVMGPTGTVVTFPKEMGLPSIFDSKPCSYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAIQQQSQHE 527          
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: K4AXI0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g079350.2 PE=4 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.508e-98
Identity = 218/471 (46.28%), Postives = 272/471 (57.75%), Query Frame = -2
Query:  735 MEESG-SRFNGANNAVXXXXXXXXXXP--DSLSYTESQNHSPLXXXXXXXXXXXXXXDENAGVDANSKRKEFNLNQ-----HVSRISPDIGFEGDKSHKRKKQDGGFNAFYDN-EPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYARKNSLQGS-------SNDGHSPPG----RSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDE---KRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKR-EITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 2075
            M+ESG +RF G N  VRKKRS    RP  +   + E ++ SPL+              EN   DAN+ RK FNLN       VSR+  D  F       +K +DGG +  Y N +PG                + + SS ++               + Q+ V   N++K+KKVKLKVGGVTRTI   +  +G  G G      +L GS       S D  S  G    +SGLQG+  +D  +G F  GK G  MGK    NA  K GD +   RKSKR PKRR+ +  F ED  DDEIRYLEKLKTSKIS  YK+ ++E   K + +SRVS V  F      KDE   + + +S++ SEDT YE E E VSD E EGKKK+KQRKES + S+++ R E+TLTTRQRAL SSKD+S+A  +S IEFPNGLPPAP RKQKEKL++VEQQLKKAEAAQ+RRMQ EKA RESE 
Sbjct:    1 MDESGGTRFEGLNATVRKKRSLMLRRPRPEKPFFHEGRDQSPLTPVSDDFGRVSSD--ENID-DANAGRKMFNLNHCMSRGSVSRVDEDYTF-------KKNKDGGSSLLYSNGDPGDDTY------------SQYGSSLRQ-------------TGTVQDGV--GNDNKLKKVKLKVGGVTRTIQTKTDSHGAYGGGLSTNARALDGSQPRQKSTSQDTSSKDGLSEKKSGLQGIMSRDSPKGSFAAGKGGD-MGKMPMTNAFEKGGDKSDPTRKSKRVPKRRVSEW-FDEDGEDDEIRYLEKLKTSKIS-GYKDFEEESTNK-RSVSRVSKVSKF-----EKDENVGRSRKKSEQGSEDTAYEVE-EFVSDGEAEGKKKQKQRKESSDSSIDAMRGEMTLTTRQRALLSSKDSSAAASASQIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQKRRMQNEKAARESEA 424          

HSP 2 Score: 167.548 bits (423), Expect = 5.508e-98
Identity = 90/116 (77.59%), Postives = 103/116 (88.79%), Query Frame = -3
Query:  296 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMA 643
            AEAIRKILGQDS+RKKRE+KIKKRQEE+AQEKA K +MLA +TIR+VMGP GT VTFP D+G P IF+SKP SYP PRE CAGPSC NPYKYRDSK+KLPLCSLQCYKAI++++ A
Sbjct:  424 AEAIRKILGQDSNRKKREDKIKKRQEELAQEKAAKEQMLAKSTIRVVMGPTGTVVTFPEDMGLPHIFDSKPCSYPPPREQCAGPSCVNPYKYRDSKTKLPLCSLQCYKAIREKEQA 539          
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: M1AI76_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009046 PE=4 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.134e-97
Identity = 194/407 (47.67%), Postives = 238/407 (58.48%), Query Frame = -2
Query:  735 DANSKRKEFNLNQHVSR-----ISPDIGFEGDKSHKRKKQDGGFNAFYDNEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDNNESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYARKNSLQGS-------SNDGHSPPG----RSGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISPAYKEDDDEPGKKQKKLSRVSNVENFGTSSSAKDE---KRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKR-EITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 1895
            DAN+ RK FNLN  +SR     +  D  F       +K +DGG +  Y N                    +    T  +  S L         + Q+ V   N+SK+KKVKLKVGGVTRTI   +  +G  G G      +L GS       S D  S  G    +SGLQG+  +D  +G F  GK    MGKT   NA  K  D +   RKSKR PKRR+ +  F ED+ DDEIRYLEKLKTSKIS  YK+ ++E   K + +SRVS V  F      KDE   + + +S++ SEDT YE E E VSD E EGKKK+KQRKES + S+++ R E+TLTTRQRAL SSKD+S+A   S IEFPNGLPPAP RKQKEKL++VEQQLKKAEAAQ+RRMQ EKA RESE 
Sbjct:   61 DANAGRKMFNLNHCMSRGSASRVDEDYTF-------KKTKDGGSSLLYSN-------------------GDPGDDTYSQHGSSLRQ-----PGTVQDGV--GNDSKLKKVKLKVGGVTRTIQTKTDSHGAYGGGLSTNARALDGSQPRQKSTSQDTSSKDGLSEKKSGLQGIMSRDSPKGSFAAGK--GDMGKTPMTNAFEKGSDKSDPTRKSKRVPKRRVSEW-FDEDEKDDEIRYLEKLKTSKIS-GYKDFEEELTNK-RSVSRVSKVSKF-----EKDENVGRSRKKSEQGSEDTAYEVE-EFVSDGEAEGKKKQKQRKESSDSSIDTMRGEMTLTTRQRALLSSKDSSAASTVSQIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQKRRMQNEKAARESEA 423          

HSP 2 Score: 167.548 bits (423), Expect = 2.134e-97
Identity = 89/116 (76.72%), Postives = 103/116 (88.79%), Query Frame = -3
Query:  296 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQMA 643
            AEAIRKILGQDS+RKKRE+KIKKRQEE+AQEKA K +MLA +T+R+VMGP GT VTFP D+G P IF+SKP SYP PRE CAGPSC NPYKYRDSK+KLPLCSLQCYKAI++++ A
Sbjct:  423 AEAIRKILGQDSNRKKREDKIKKRQEELAQEKAAKEQMLAKSTVRVVMGPTGTVVTFPEDMGLPHIFDSKPCSYPPPREQCAGPSCVNPYKYRDSKTKLPLCSLQCYKAIREKEQA 538          
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Match: F6I4T0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01140 PE=4 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.236e-94
Identity = 220/434 (50.69%), Postives = 277/434 (63.82%), Query Frame = -2
Query:  735 ENAGVDANSKRKEFNLNQHVSRISPDIGFEGDKSHKR-KKQDGGF--------NAFYD--NEPXXXXXXXXXXXXGVLAPANWKSSTKEKEWSELESRDAEIQSSTQEAVIDN--NESXXXXXXXXXXXVTRTIHANSTVNGLPGTGSYA-------------RKNSLQGSSNDGHSPPGR--SGLQGVPWKDFSQGGFRLGKEGSLMGKTSGKNASGKQGDHAGTVRKSKRAPKRRLLDGEFSEDDNDDEIRYLEKLKTSKISP----AYKEDDDEPGKKQKKLSRV----------SNVENFGTSSSAKDEKRKHRSDRVSEDTDYEEEDEPVSDSELEGKKKRKQRKESVEPSMESKREITLTTRQRALQXXXXXXXXXXXSLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAAQRRRMQVEKANRESEV 1910
            EN G  ++S+ KE  LNQ  S+ S  +   G+ + K  K +DGGF        N  +    E   SGS+SKR S+GVLAPANWK   ++   S + S   +   S  EAV+D   NE+K+KKVKLKVGGVT TIHA ST +G    GS +             +K  LQ  S+D +SPP    SGL+GVPWKDFS+ GF + K  SL GK   +  S KQ      VRKSKR PK+R+LDG   ++DND+EI+YLEKLKTSK+S      Y++++++ G+KQ+K+SRV           +V +F  SS    E +K RS R  ED DY EE+E +SD E E KKK K RKE V+ S +SKRE+ +TTRQRALQ+SKD S++ G + IEFPNGLPPAP RKQKEKL+EVEQQLKKAEAAQRRRMQVEKA RESE 
Sbjct:   59 ENTGYVSSSRNKE--LNQCSSKAS-SVNVTGETTQKMFKNEDGGFGESNEASINGSFQGLTEQRHSGSDSKRCSEGVLAPANWK--IRDTHTSGMISGTCD---SGPEAVVDGLGNENKLKKVKLKVGGVTHTIHAKSTSDGASVGGSSSTKSSRASDAPRQRQKLILQDDSDDDNSPPPVKGSGLRGVPWKDFSRSGFSVAKGDSLKGKMPEEGFSMKQAGKYEPVRKSKRVPKKRVLDGAEDDEDNDEEIKYLEKLKTSKVSTDYGAEYEDEEEDGGRKQRKISRVLKRNGNGQYNVDVGDF-GSSKGSKESKKSRSGRAYEDIDYMEEEEALSDGEPETKKK-KLRKEFVDSSGDSKREMAVTTRQRALQTSKDISASIGVNFIEFPNGLPPAPPRKQKEKLTEVEQQLKKAEAAQRRRMQVEKAARESEA 482          

HSP 2 Score: 152.525 bits (384), Expect = 2.236e-94
Identity = 85/115 (73.91%), Postives = 97/115 (84.35%), Query Frame = -3
Query:  299 AEAIRKILGQDSSXXXXXXXXXXXXXEMAQEKAVKAEMLASNTIRLVMGPAGTTVTFPRDLGFPRIFNSKPSSYPAPRENCAGPSCGNPYKYRDSKSKLPLCSLQCYKAIQKQQM 643
            AEAIRKILGQDSSRKKREEKIKKRQEE+AQE+A  A  +++NT+R VMGP GTTVTFP ++G P IF  K SSYP PRE CAGPSC NPYKYRDSKSKLPLCSLQCY+A+  + +
Sbjct:  482 AEAIRKILGQDSSRKKREEKIKKRQEELAQERAANALTISANTVRWVMGPTGTTVTFPNEMGLPSIFEPKLSSYPPPREKCAGPSCMNPYKYRDSKSKLPLCSLQCYRALHAKTL 596          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of g.barbadense_cottongen_reftransV1_0092930 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A0K5U0_CUCSA3.708e-12156.80Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
B9I9I0_POPTR7.762e-11153.94Uncharacterized protein OS=Populus trichocarpa GN=... [more]
K4AXI0_SOLLC5.508e-9846.28Uncharacterized protein OS=Solanum lycopersicum GN... [more]
M1AI76_SOLTU2.134e-9747.67Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
F6I4T0_VITVI2.236e-9450.69Putative uncharacterized protein OS=Vitis vinifera... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 418..448
NoneNo IPR availablePANTHERPTHR21561:SF15SUBFAMILY NOT NAMEDcoord: 9..453
IPR006880INO80 complex subunit B-like conserved regionPFAMPF04795PAPA-1coord: 429..453
e-value: 8.5E-5
score: 23.1
IPR029523INO80 complex, subunit Ies2PANTHERPTHR21561FAMILY NOT NAMEDcoord: 9..453

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092930 ID=g.barbadense_cottongen_reftransV1_0092930; Name=g.barbadense_cottongen_reftransV1_0092930; organism=Gossypium barbadense; type=contig; length=2655bp
GTGGGACTGAATATTGCTTTATAGCTTAAAATTATTAAGCCAAGAAAGAA
AGAATTGTAGCCTCTCTGGATTGGAATGGAGAGGAATTCTTTTATTTATG
GATTATACTAAAATAAACACAACTAAGATTTTCTTGTACCTGTAATAATT
ACATTAATATTACTCCAAAAAGAAGTTTGCATTTGGCTCTATTTTCTAAT
CCGTCCCTGGGTTGAAATGGAACATAAATGTGCAGAATTTACCACATGCA
CAAGAGGGAAGTGCTGGATTTTCAGCAACACTAGCAGGTAGTTTCAGCCA
TCTGCTGTTTTTGAATTGCCTTGTAGCACTGCAGACTACAAAGAGGTAGC
TTCGACTTTGAATCTCGATATTTGTATGGGTTACCACACGATGGACCCGC
ACAGTTCTCTCGAGGAGCAGGGTAACTAGAGGGTTTGGAGTTAAATATAC
GAGGGAAACCCAAATCCCTGGGAAATGTTACTGTTGTTCCTGCAGGACCC
ATGACCAATCTGATGGTATTTGATGCAAGCATCTCCGCTTTAACAGCCTT
CTCCTGTGCCATCTCTTCCTGACGCTTTTTGATTTTTTCTTCCCGCTTCT
TCCTGCTAGAGTCTTGGCCAAGTATTTTTCTAATAGCCTCAGCCTACATC
AATTAATTCAAACACACTCAATTTTTGCATTGTAGTTCTAAAATCCATAT
GCAAAGACATTGTAATCCCGAAGCAACAGAAACAAACCTCAGATTCCCTA
TTGGCCTTCTCAACTTGCATCCTTCGTCTCTGAGCAGCCTCTGCCTTCTT
TAGCTGCTGCTCCACTTCCGAGAGTTTCTCCTTTTGCTTTCTTGATGGGG
CAGGTGGTAGACCATTTGGAAACTCGATTAAGCTTGAGCCAGGCGCAGAA
GAGGCATCTTTGCTAGACTGAAGAGCCCGTTGACGTGTTGTGAGAGTTAT
TTCCCTCTTACTCTCCATTGATGGCTCAACAGATTCTTTCCTTTGCTTCC
TTTTCTTCTTACCTTCAAGCTCACTATCAGATACTGGTTCATCTTCCTCC
TCATAATCGGTATCCTCAGAAACCCTATCTGATCTATGCTTCCTTTTCTC
ATCTTTGGCAGAACTTGAAGTGCCAAAGTTTTCTACGTTGGAAACCCTGG
AGAGTTTTTTCTGTTTCTTGCCTGGTTCATCATCATCTTCCTTATATGCT
GGACTAATCTTCGAAGTTTTAAGTTTTTCCAAGTAACGGATCTCATCATC
ATTGTCATCTTCACTGAATTCCCCATCAAGTAGACGTCTCTTAGGGGCCC
GCTTGCTTTTACGAACCGTGCCGGCATGGTCTCCTTGTTTACCAGAGGCA
TTCTTTCCAGATGTCTTTCCCATCAAAGAACCCTCCTTCCCAAGTCTAAA
ACCACCTTGGGAGAAATCTTTCCAGGGTACACCTTGCAAACCACTCCTAC
CTGGAGGTGAGTGCCCATCATTGCTACTTCCCTGGAGACTGTTCTTCCTT
GCATAGGACCCAGTCCCTGGCAATCCATTAACTGTTGAGTTTGCATGAAT
TGTGCGCGTAACTCCACCAACCTTGAGCTTAACCTTTTTAACCTTGCTTT
CATTATTATCAATAACAGCTTCTTGTGTTGAACTCTGAATCTCCGCATCT
CTTGACTCTAATTCCGACCACTCTTTCTCCTTGGTACTGCTTTTCCAATT
AGCAGGGGCAAGTACACCCTTGCTAGAACGCTTACTATTTGACCCGCTTC
GCCCGGGCTCATTGTCGTAAAATGCATTGAACCCTCCATCTTGTTTCTTT
CTTTTATGGGATTTGTCACCTTCAAAACCAATGTCAGGAGAAATCCTAGA
AACGTGTTGATTAAGATTAAATTCTTTCCGCTTTGAATTAGCATCGACAC
CGGCATTCTCATCACTGGAGACTTTGCTCACATCATCCGAAGGTGGTGTC
GATGACAATGGAGAGTGATTCTGGCTTTCAGTATAAGACAGCGAATCAGG
ACGAGGCCGACGAGAACTCCTCTTCTTCCTCACAGCATTATTTGCGCCGT
TAAACCGACTACCCGACTCTTCCATGGTGGTAAATAACTTTACCAGAAGG
ATAATCTAGCAAGACCGCTAATCCTTCTTGAGCTAACCGTACAGAAGAAA
CCGAGGAAATCAGGGAAGAGAAAAGAAGAGAGAAGAAGAGGAAAGAGAGA
AGGAGAAGGCGGAAGGTAAAATAGATTAGGTGGGAATGTGAAAAAGAATA
AAAGGATTTTCGTAGAGAAGGGGAAAAGAAAGAAAGGGAAGAGATGGGAA
TGGAAGGGTTAAAAAGAAAAAGAGGTTTTAGGGTTAGAGAAGGATAGGCA
GATGTTGTTATAGTAACAATTATCTGCTGGTTCACCATTATTTTGCTATT
GCCACACCACCCCTGTGTTTTCCTTTTTATCGTTTGGGTGTGGGCTGGAA
CTTGGAAGGGTGGGTTTTGAGATTGATTTTTTTGGATATTTGACTCGGTC
ACTCGACTCGCCGAACCGACTCAGCCCCCTTCCCCTCTCTTTCTCGCGCT
TTTCTTTTTTCTTTCATTCCGTTCGTCCTTCTTCGTTTCTTAGTCTTAAC
GATTTTAATTTTTTTTTTACACGGTTTACGCTGCAAGAGCGTGCGTAGGT
TAAAT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR006880INO80B_C
IPR029523INO80B/Ies2
Vocabulary: Cellular Component
TermDefinition
GO:0031011Ino80 complex
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
GO:0006338chromatin remodeling