g.barbadense_cottongen_reftransV1_0092928, g.barbadense_cottongen_reftransV1_0092928 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092928
Unique Nameg.barbadense_cottongen_reftransV1_0092928
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1998
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At05chromosomeg.barbadense_cottongen_reftransV1_0092928:1..1998 .
At05:31124694..31130712 -
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092928 vs. ExPASy TrEMBL
Match: V4VEQ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031658mg PE=4 SV=1)

HSP 1 Score: 464.537 bits (1194), Expect = 2.582e-154
Identity = 235/421 (55.82%), Postives = 319/421 (75.77%), Query Frame = -2
Query:  186 MGFLDLLLVALIPVIKVLFITGVGLFLALDHVNLLGPDARNHLNKIVFYVFGPALVATNLAQTITYESLVTLWFMPVNILLTFMIGSALAWLLIKITRTPKHLQGMVIGCCSAGNLGNLPLIIVPSVCEESNNPFGESSTCFSNAQAYASLSMATGAIFIWSYVYGIMRSYAN-NYKEAGLT----ININSSQKNSYSESDLETCREPLLPSKDWVAASDEYSVQQQPHGNFETQEKISALRKRFQCITMTMKKINLKEVFAPSAIAGMVGFFIGTVSPIRQILIGADAPLRVIENSINLLGDPTVACMTLLVGANLLKGLTRSDIRPSXXXXXIAVRNVFMPLLGIGVVNAAQHLGLVGTDALFQFVLMLQYALPPAMAVGTMTQLFQMGQSESSVIMLWTYVVAAFSLTLWSTVFMWLL 1433
            M  LDL  VAL+P++KVL +T +GL LA+D ++LLG    + LN +VFYVF PAL+ +NLA+TITY+SL++LWFMPVNILL+F+IGSALAW+LIKITRTP HLQG+VIGCCSAGN+GNL LIIVP+VCEESN+PFG++S C S  +AYASLSMA GAI+IW+YVY +M  Y N +  +AG      I+I SS ++S ++  LE+ R+PLL S D   + D+  +Q +      T+ +   L K  Q I    +KI+LK +FAPS IA ++GF IGT+SP R++++G  APLRV+++S  L+G+  +  MTL++GANLL GL RS +  S+I+GIIA+R + +PLLGI +V AA   G +G+D+L+QF+L+LQYA+PPA+AVGT+ QLF+  +SE SVI+LWTY VAAF+LTLW T ++WLL
Sbjct:    1 MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESS-TDIFLESSRKPLLHSSDR-HSPDDSQIQAETR---STKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLL 416          
BLAST of g.barbadense_cottongen_reftransV1_0092928 vs. ExPASy TrEMBL
Match: F6I0B4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01850 PE=4 SV=1)

HSP 1 Score: 463.766 bits (1192), Expect = 5.882e-154
Identity = 233/418 (55.74%), Postives = 302/418 (72.25%), Query Frame = -2
Query:  186 MGFLDLLLVALIPVIKVLFITGVGLFLALDHVNLLGPDARNHLNKIVFYVFGPALVATNLAQTITYESLVTLWFMPVNILLTFMIGSALAWLLIKITRTPKHLQGMVIGCCSAGNLGNLPLIIVPSVCEESNNPFGESSTCFSNAQAYASLSMATGAIFIWSYVYGIMRSYANNYKEAGLTININSSQKNSYS--ESDLETCREPLLPSKDWVAASDEYSVQQQPHGNFETQEKISALRKRFQCITMTMKKINLKEVFAPSAIAGMVGFFIGTVSPIRQILIGADAPLRVIENSINLLGDPTVACMTLLVGANLLKGLTRSDIRPSXXXXXIAVRNVFMPLLGIGVVNAAQHLGLVGTDALFQFVLMLQYALPPAMAVGTMTQLFQMGQSESSVIMLWTYVVAAFSLTLWSTVFMWLL 1433
            MGF  L + AL+P++KVL +TG+GLF+AL+ ++LLGP AR+HLN +VFY+F PALVA+NLA T+T  SL T+WFMPVNILLTF+IGSAL W+LIKITR P+HL  +++GCCSAGN+GNL  II+P++CEES+NPFG SS C ++  AYASLS A GAI +W+YVY IMR  A   K      N  +S + S    E   + C E LLP +D   + +    ++ PH   E + ++    K  Q + + M+K N K+VF PS I  + GFFIG + PIR+++IG  APLRVIE+S  LLG+  +   TL++GANLL GL  SD+   +I+GI+AVR +F+PLLG+ VV AA H GLVG++ LFQFVLMLQYA+PPAM  G + QLFQ GQSE SVIMLWTY VA F+LTLWST FMWL+
Sbjct:    1 MGFWSLFVTALMPILKVLVVTGIGLFIALERIDLLGPTARHHLNTLVFYIFYPALVASNLADTVTASSLATMWFMPVNILLTFIIGSALGWILIKITRPPQHLHALILGCCSAGNMGNLFFIIIPAICEESDNPFG-SSDCSTDGDAYASLSSALGAIGVWTYVYMIMRMSATKCKGEINLCNSTTSVRTSREALEISSDCCTEALLPPRDSPRSGNWSDEEELPHDGSEEKSEVPFSEKIKQKVKIFMEKTNFKQVFTPSTIGVIFGFFIGLIPPIRKLIIGDSAPLRVIESSATLLGEAAIPSTTLIMGANLLSGLKGSDVSIVVILGIVAVRYIFLPLLGVVVVKAATHFGLVGSNLLFQFVLMLQYAVPPAMGTGVICQLFQFGQSECSVIMLWTYAVAGFALTLWSTFFMWLV 417          
BLAST of g.barbadense_cottongen_reftransV1_0092928 vs. ExPASy TrEMBL
Match: A0A067FRQ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014841mg PE=4 SV=1)

HSP 1 Score: 463.381 bits (1191), Expect = 6.472e-154
Identity = 235/421 (55.82%), Postives = 318/421 (75.53%), Query Frame = -2
Query:  186 MGFLDLLLVALIPVIKVLFITGVGLFLALDHVNLLGPDARNHLNKIVFYVFGPALVATNLAQTITYESLVTLWFMPVNILLTFMIGSALAWLLIKITRTPKHLQGMVIGCCSAGNLGNLPLIIVPSVCEESNNPFGESSTCFSNAQAYASLSMATGAIFIWSYVYGIMRSYAN-NYKEAGLT----ININSSQKNSYSESDLETCREPLLPSKDWVAASDEYSVQQQPHGNFETQEKISALRKRFQCITMTMKKINLKEVFAPSAIAGMVGFFIGTVSPIRQILIGADAPLRVIENSINLLGDPTVACMTLLVGANLLKGLTRSDIRPSXXXXXIAVRNVFMPLLGIGVVNAAQHLGLVGTDALFQFVLMLQYALPPAMAVGTMTQLFQMGQSESSVIMLWTYVVAAFSLTLWSTVFMWLL 1433
            M  LDL  VAL+P++KVL +T +GL LA+D ++LLG    + LN +VFYVF PAL+ +NLA+TITY+SL++LWFMPVNILL+F+IGSALAW+LIKITRTP HLQG+VIGCCSAGN+GNL LIIVP+VCEESN+PFG++S C S  +AYASLSMA GAI+IW+YVY +M  Y N +  +AG      I+I SS ++S +   LE+ R+PLL S D   + D+  +Q +      T+ +   L K  Q I    +KI+LK +FAPS IA ++GF IGT+SP R++++G  APLRV+++S  L+G+  +  MTL++GANLL GL RS +  S+I+GIIA+R + +PLLGI +V AA   G +G+D+L+QF+L+LQYA+PPA+AVGT+ QLF+  +SE SVI+LWTY VAAF+LTLW T ++WLL
Sbjct:    1 MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSMAVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESS-TNIFLESSRKPLLHSSDR-RSPDDSQIQAETR---STKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLL 416          
BLAST of g.barbadense_cottongen_reftransV1_0092928 vs. ExPASy TrEMBL
Match: A0A059CF35_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01141 PE=4 SV=1)

HSP 1 Score: 461.84 bits (1187), Expect = 3.869e-153
Identity = 241/421 (57.24%), Postives = 319/421 (75.77%), Query Frame = -2
Query:  186 MGFLDLLLVALIPVIKVLFITGVGLFLALDHVNLLGPDARNHLNKIVFYVFGPALVATNLAQTITYESLVTLWFMPVNILLTFMIGSALAWLLIKITRTPKHLQGMVIGCCSAGNLGNLPLIIVPSVCEESNNPFGESSTCFSNAQAYASLSMATGAIFIWSYVYGIMRSYANNYKE----AGLTININSSQKNSYSESDLETCREPLLPSKDWVAASDEYSVQQQ-PHGNFETQEKISALRKRFQCITMTMKKINLKEVFAPSAIAGMVGFFIGTVSPIRQILIGADAPLRVIENSINLLGDPTVACMTLLVGANLLKGLTRSDIRPSXXXXXIAVRNVFMPLLGIGVVNAAQHLGLVGTDALFQFVLMLQYALPPAMAVGTMTQLFQMGQSESSVIMLWTYVVAAFSLTLWSTVFMWLL 1433
            MG LDL +VAL+PV+KVL +T VG  LA++ VNLLG DA+ H+N +VFY+F P+L+A+ LA TIT  SLVTLWFMPVNILLTF+IGSALAW+LIK+TRTP+HLQ +VIGCC+AGNLGNL LII+P+VC E+N+PFG+SSTC +  +AYASLSMA GA++IW YVY +MR  A    E       T ++N+ +  S    ++ T  EPLL S+D  +  D  S + +     FE + KI  L+K  Q IT   + I++K++FAPS IA ++GF IG  SPIR+++IG DAPLRVI N+ +LLG+  + C+TL++GANLL+GL RS + P +IIG+I +R + +PL+GIGVV AA H G+VG+DAL+QF LMLQ+ALPPAM VGT+TQL + G++E S+IMLWTY VA+ SLTLWST FMW++
Sbjct:    1 MGVLDLFVVALMPVLKVLLVTAVGSLLAMERVNLLGRDAKQHVNNLVFYIFSPSLIASKLADTITLSSLVTLWFMPVNILLTFIIGSALAWVLIKLTRTPRHLQSLVIGCCAAGNLGNLLLIILPAVCTETNSPFGDSSTCSTYGEAYASLSMAIGAVYIWCYVYPLMRISAEKRAEETDPKDSTASLNADEVISGGLPEIIT--EPLLASEDSPSPMDCISQEDEICQTRFEGKTKILCLKKIRQHITTITEHIDIKKLFAPSTIAVIIGFIIGVASPIRKLIIGDDAPLRVIYNATDLLGEAAIPCITLIIGANLLRGLKRSTVSPVVIIGVITIRYIALPLIGIGVVKAAHHFGMVGSDALYQFTLMLQFALPPAMNVGTITQLLEAGENECSIIMLWTYAVASLSLTLWSTFFMWIV 419          
BLAST of g.barbadense_cottongen_reftransV1_0092928 vs. ExPASy TrEMBL
Match: A0A067FRM7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014841mg PE=4 SV=1)

HSP 1 Score: 457.218 bits (1175), Expect = 2.049e-151
Identity = 234/421 (55.58%), Postives = 317/421 (75.30%), Query Frame = -2
Query:  186 MGFLDLLLVALIPVIKVLFITGVGLFLALDHVNLLGPDARNHLNKIVFYVFGPALVATNLAQTITYESLVTLWFMPVNILLTFMIGSALAWLLIKITRTPKHLQGMVIGCCSAGNLGNLPLIIVPSVCEESNNPFGESSTCFSNAQAYASLSMATGAIFIWSYVYGIMRSYAN-NYKEAGLT----ININSSQKNSYSESDLETCREPLLPSKDWVAASDEYSVQQQPHGNFETQEKISALRKRFQCITMTMKKINLKEVFAPSAIAGMVGFFIGTVSPIRQILIGADAPLRVIENSINLLGDPTVACMTLLVGANLLKGLTRSDIRPSXXXXXIAVRNVFMPLLGIGVVNAAQHLGLVGTDALFQFVLMLQYALPPAMAVGTMTQLFQMGQSESSVIMLWTYVVAAFSLTLWSTVFMWLL 1433
            M  LDL  VAL+P++KVL +T +GL LA+D ++LLG    + LN +VFYVF PAL+ +NLA+TITY+SL++LWFMPVNILL+F+IGSALAW+LIKITRTP HLQG+VIGCCSAGN+GNL LIIVP+VCEESN+PFG++S C S  +AYASLSM  GAI+IW+YVY +M  Y N +  +AG      I+I SS ++S +   LE+ R+PLL S D   + D+  +Q +      T+ +   L K  Q I    +KI+LK +FAPS IA ++GF IGT+SP R++++G  APLRV+++S  L+G+  +  MTL++GANLL GL RS +  S+I+GIIA+R + +PLLGI +V AA   G +G+D+L+QF+L+LQYA+PPA+AVGT+ QLF+  +SE SVI+LWTY VAAF+LTLW T ++WLL
Sbjct:    1 MEILDLFEVALMPILKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWFMPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDTSVCSSYGKAYASLSM-VGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESS-TNIFLESSRKPLLHSSDR-RSPDDSQIQAETR---STKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLL 415          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092928 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of g.barbadense_cottongen_reftransV1_0092928 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V4VEQ4_9ROSI2.582e-15455.82Uncharacterized protein OS=Citrus clementina GN=CI... [more]
F6I0B4_VITVI5.882e-15455.74Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A067FRQ6_CITSI6.472e-15455.82Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A059CF35_EUCGR3.869e-15357.24Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A067FRM7_CITSI2.049e-15155.58Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004776Membrane transport proteinPFAMPF03547Mem_transcoord: 31..428
e-value: 1.6E-67
score: 227.4
NoneNo IPR availablePANTHERPTHR31651:SF6SUBFAMILY NOT NAMEDcoord: 22..436
NoneNo IPR availablePANTHERPTHR31651FAMILY NOT NAMEDcoord: 22..436
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 368..378
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 296..314
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 315..333
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 187..274
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 345..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 437..437
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 415..436
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 334..344
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 379..403
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 404..414
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 148..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 275..295
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 275..297
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 412..434
NoneNo IPR availableTMHMMTMhelixcoord: 346..368
NoneNo IPR availableTMHMMTMhelixcoord: 378..400
NoneNo IPR availableTMHMMTMhelixcoord: 312..333
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092928 ID=g.barbadense_cottongen_reftransV1_0092928; Name=g.barbadense_cottongen_reftransV1_0092928; organism=Gossypium barbadense; type=contig; length=1998bp
TTTTGATAAATACTCCATTTCAAAATAATAATCGGAATAAATCTACCTAT
AGGAGATGGTAGGAAGAGAGAAGGAATTTGATTTCCATGTCAATGAGATT
CAGTACTTGAGAAAAAGTAAAATATTAAGTTCGTCAATAGAGAAACATGT
ATATGTGAACCAATAATTTCCAAACCAAATCAAAATAAAAGCCACATGAA
AACCGTTGACCAAAGGGTGAGGGAGAATGCTGCTACAACATATGTCCATA
GCATTATTACTGAACTTTCACTTTGACCCATCTGAAATAGTTGTGTCATT
GTGCCTACAGCCATGGCAGGCGGAAGGGCATACTGAAGCATTAGAACAAA
CTGGAACAAGGCGTCTGTTCCAACCAAGCCCAAATGCTGTGCAGCATTAA
CAACACCGATGCCCAAGAGAGGCATGAATACGTTCCTCACAGCTATTATC
CCTATAATGATTGAAGGACGAATATCTGATCTTGTTAAACCTTTTAGAAG
ATTTGCTCCCACCAGCAAGGTCATACATGCAACTGTTGGGTCCCCAAGCA
AATTTATAGAATTCTCGATAACACGAAGAGGAGCATCGGCACCAATTAGG
ATTTGTCGGATTGGTGAGACTGTCCCGATGAAGAATCCAACCATTCCTGC
AATTGCTGATGGTGCAAACACTTCCTTTAGGTTAATCTTCTTCATGGTCA
TAGTTATGCATTGAAATCTCTTCCTCAAAGCTGAAATCTTTTCTTGTGTT
TCAAAATTGCCGTGAGGCTGTTGTTGTACTGAATATTCATCTGAAGCAGC
AACCCAATCCTTTGAGGGTAGTAAAGGTTCTCGGCAAGTTTCCAAATCTG
ATTCCGAGTAGGAATTTTTTTGTGAAGAGTTGATGTTGATGGTTAACCCA
GCTTCTTTGTAGTTGTTTGCGTATGAACGCATAATGCCATACACATATGA
CCATATAAAGATGGCTCCTGTCGCCATAGACAGTGAAGCATAGGCCTGGG
CATTTGAAAAACAAGTGGATGATTCTCCAAATGGATTATTTGATTCCTCA
CAGACTGAAGGAACTATAATGAGTGGCAAATTTCCTAAATTCCCAGCAGA
ACAACAACCAATGACCATGCCTTGGAGGTGTTTAGGAGTTCTAGTGATTT
TTATAAGAAGCCAAGCAAGTGCTGACCCAATCATGAATGTGAGCAAAATA
TTCACCGGCATGAACCACAATGTCACTAAGCTTTCATAGGTTATGGTTTG
AGCCAAGTTCGTTGCCACAAGTGCAGGGCCAAACACATAGAATACAATTT
TGTTCAAATGGTTTCTGGCGTCTGGTCCCAACAGATTGACATGATCTAAA
GCAAGAAACAAGCCAACTCCGGTAATGAAAAGCACTTTTATAACCGGAAT
CAGTGCCACAAGGAGTAGATCAAGGAATCCCATTAGCCTATACTCACACC
TGATCTTCAACTTGATTATTCCACTTGTACATCCAATAAACAATCAATAT
TCAAAGTCCTAAAAGACTTGATTTAACAACTTCCATCTATCGTCAATGCC
ACCAAGTAGATGGAGACCGTAGGTGGCGTCAAGCCCTTAATACTTGGAAC
TATCACTGGCCCCCCTGTTTTTTTTATTAAGTGTTGTTATCATACGAGAA
GCTTCATTTGCATTCTTTAAGCAGCCTCAAGCACGTTAAAATGCCCCAGC
CGCGGCCGCTGCAACTTATCCGACGCTGATGGAGACTGAGATGATAAGTC
CTGCTAAACCGGATGTTCTCCTTCTCTCGTCTTTCGGATCAAAGGAATGG
TTGGGAAAGATCTAAGGTTGGATGGTAATGGGAGGTGGATGGGTTAATAG
AATAGTGGAGGGTTTTGTAATGGAGATGAGGGAGGGTTGTGACAATACTA
GTTATAAAGGGAGATTGGGAGATCTGGCAGAGGAGCTGGTAAGCCTGTGC
TGTCGGGCTATATGGTGGCTAGCCACTAGGAAAGCAGTGTTCTTTTTG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR004776Mem_transp_PIN-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral to membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport