g.barbadense_cottongen_reftransV1_0092725, g.barbadense_cottongen_reftransV1_0092725 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR11_ARATH (Dirigent protein 11 OS=Arabidopsis thaliana GN=DIR11 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 4.145e-8 Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = -1 Query: 4400 RNPITESERELAVVGGKGKFRMAKGYAQLKTY-TVNFKTGDAIVEYNVTVIH 4552 RNPI EREL ++GG G FR A+GYA KTY VN DA+VEYNV + H Sbjct: 145 RNPILLEERELPIIGGTGDFRFARGYALPKTYKVVNI---DAVVEYNVFIWH 193
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR20_ARATH (Dirigent protein 20 OS=Arabidopsis thaliana GN=DIR20 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.773e-8 Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = -1 Query: 4397 RNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIHY 4552 RN RE+ +VGG G FR A+GY + +T +N K GDA VEY+ V+HY Sbjct: 136 RNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYVLHY 187
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR3_ARATH (Dirigent protein 3 OS=Arabidopsis thaliana GN=DIR3 PE=3 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.305e-7 Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = -1 Query: 4397 RNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIHY 4552 RN + RE+ VVGG G FR A+GY + +T + KTGDA VE N ++HY Sbjct: 140 RNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNCYILHY 191
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR7_ARATH (Dirigent protein 7 OS=Arabidopsis thaliana GN=DIR7 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 4.577e-7 Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = -1 Query: 4397 RNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIHY 4552 RN + RE+ V+GG G FR A+GY + +T + K+GDA VEY+ V+HY Sbjct: 135 RNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYVLHY 186
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2V5P2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G152400 PE=4 SV=1) HSP 1 Score: 1284.24 bits (3322), Expect = 0.000e+0 Identity = 741/853 (86.87%), Postives = 770/853 (90.27%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVS--ADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTTGFSLFFYKYLVRKWKPH 2668 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKLEE LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTPD Y EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFPP SAV + DGD DG+ +KDSLLENLFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTV K+VSETTESKTTQEDQA+T PMETSKPEDEKEV GSEEPSETKTGTD KGVKETLKPEDMNV KDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+SVANDTGNRGAQNVKHS DESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES+NFATNEEDKKANLNESSIINQSKDHQPSVTRVSN +TSQVLPS+LEETGGK TAKEPSQPPKAVKEVDMS SVQLKKNEPCDAAASKPVGELSEPA+ASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTTGFSLFFYKYLVRKWKPH Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLEETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWTKIHHLEESILPSFFNGKSPNRTPDAYKEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPPAGSAVPNPNGDGDGDGMTEKDSLLENLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVPKDVSETTESKTTQEDQAQTTPMETSKPEDEKEVRGSEEPSETKTGTDAKGVKETLKPEDMNVRKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKSVANDTGNRGAQNVKHSGDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESSNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNNLTSQVLPSSLEETGGKETAKEPSQPPKAVKEVDMSGSVQLKKNEPCDAAASKPVGELSEPANASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTTGFSLFFYKYLVRKWKPH 845
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2VZQ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G152400 PE=4 SV=1) HSP 1 Score: 1247.65 bits (3227), Expect = 0.000e+0 Identity = 724/836 (86.60%), Postives = 753/836 (90.07%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVS--ADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKLEE LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTPD Y EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFPP SAV + DGD DG+ +KDSLLENLFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTV K+VSETTESKTTQEDQA+T PMETSKPEDEKEV GSEEPSETKTGTD KGVKETLKPEDMNV KDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+SVANDTGNRGAQNVKHS DESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES+NFATNEEDKKANLNESSIINQSKDHQPSVTRVSN +TSQVLPS+LEETGGK TAKEPSQPPKAVKEVDMS SVQLKKNEPCDAAASKPVGELSEPA+ASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTT Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLEETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWTKIHHLEESILPSFFNGKSPNRTPDAYKEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPPAGSAVPNPNGDGDGDGMTEKDSLLENLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVPKDVSETTESKTTQEDQAQTTPMETSKPEDEKEVRGSEEPSETKTGTDAKGVKETLKPEDMNVRKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKSVANDTGNRGAQNVKHSGDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESSNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNNLTSQVLPSSLEETGGKETAKEPSQPPKAVKEVDMSGSVQLKKNEPCDAAASKPVGELSEPANASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTT 828 HSP 2 Score: 333.954 bits (855), Expect = 1.562e-92 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 DKIEEGKSKNHDSTEREDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK Sbjct: 829 DKIEEGKSKNHDSTEREDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 1014
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2V6W7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G152400 PE=4 SV=1) HSP 1 Score: 1244.18 bits (3218), Expect = 0.000e+0 Identity = 725/837 (86.62%), Postives = 754/837 (90.08%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVS--ADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTTG 2620 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKLEE LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTPD Y EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFPP SAV + DGD DG+ +KDSLLENLFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTV K+VSETTESKTTQEDQA+T PMETSKPEDEKEV GSEEPSETKTGTD KGVKETLKPEDMNV KDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+SVANDTGNRGAQNVKHS DESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES+NFATNEEDKKANLNESSIINQSKDHQPSVTRVSN +TSQVLPS+LEETGGK TAKEPSQPPKAVKEVDMS SVQLKKNEPCDAAASKPVGELSEPA+ASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTTG Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLEETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWTKIHHLEESILPSFFNGKSPNRTPDAYKEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPPAGSAVPNPNGDGDGDGMTEKDSLLENLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVPKDVSETTESKTTQEDQAQTTPMETSKPEDEKEVRGSEEPSETKTGTDAKGVKETLKPEDMNVRKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKSVANDTGNRGAQNVKHSGDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESSNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNNLTSQVLPSSLEETGGKETAKEPSQPPKAVKEVDMSGSVQLKKNEPCDAAASKPVGELSEPANASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTTG 829
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2S3J9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G152400 PE=4 SV=1) HSP 1 Score: 1243.8 bits (3217), Expect = 0.000e+0 Identity = 724/836 (86.60%), Postives = 753/836 (90.07%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVS--ADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKLEE LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTPD Y EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFPP SAV + DGD DG+ +KDSLLENLFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTV K+VSETTESKTTQEDQA+T PMETSKPEDEKEV GSEEPSETKTGTD KGVKETLKPEDMNV KDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+SVANDTGNRGAQNVKHS DESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES+NFATNEEDKKANLNESSIINQSKDHQPSVTRVSN +TSQVLPS+LEETGGK TAKEPSQPPKAVKEVDMS SVQLKKNEPCDAAASKPVGELSEPA+ASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTT Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLEETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWTKIHHLEESILPSFFNGKSPNRTPDAYKEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPPAGSAVPNPNGDGDGDGMTEKDSLLENLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVPKDVSETTESKTTQEDQAQTTPMETSKPEDEKEVRGSEEPSETKTGTDAKGVKETLKPEDMNVRKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKSVANDTGNRGAQNVKHSGDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESSNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNNLTSQVLPSSLEETGGKETAKEPSQPPKAVKEVDMSGSVQLKKNEPCDAAASKPVGELSEPANASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTT 828 HSP 2 Score: 78.9518 bits (193), Expect = 2.599e-11 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQL 3141 DKIEEGKSKNHDSTEREDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQ+ Sbjct: 829 DKIEEGKSKNHDSTEREDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQV 891
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0B0MJQ1_GOSAR (SWI/SNF complex subunit SWI3D-like protein OS=Gossypium arboreum GN=F383_19306 PE=4 SV=1) HSP 1 Score: 1232.24 bits (3187), Expect = 0.000e+0 Identity = 715/838 (85.32%), Postives = 753/838 (89.86%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDG----IAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKL+E LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTP Y+EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFP SAV + +GD DG + +KDSLLE LFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAK+VSETTESKTTQEDQAKT PMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPE+MNVPKDGLEATENCALTA+REAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPN AAAS+QSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+SVANDTGNRGAQNVKHSEDESLKGDQK S+S+HGDENTEVSLREENATSPSPNDLTTDKKES+NFATNEEDKKANLNESSIINQSKDHQPSVTRVSN ITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKP PDGESTEPA+AS+DVQ+VSV+QPSER EPPQPV+SNSVNENGV T Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLQETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWNKIHHLEESILPSFFNGKSPNRTPAAYMEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPLAGSAVPNPNGDGDGDGDGMTEKDSLLEKLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAKDVSETTESKTTQEDQAKTTPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEEMNVPKDGLEATENCALTALREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNFAAASAQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKSVANDTGNRGAQNVKHSEDESLKGDQKISMSNHGDENTEVSLREENATSPSPNDLTTDKKESSNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNNITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPSPDGESTEPAEASNDVQMVSVAQPSERREPPQPVSSNSVNENGVMT 830 HSP 2 Score: 327.405 bits (838), Expect = 2.347e-90 Identity = 183/186 (98.39%), Postives = 183/186 (98.39%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 DKIEEGKSKNHDSTE EDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVS VAGSSIRPGSQDNLSSVGTK Sbjct: 831 DKIEEGKSKNHDSTETEDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSTKVAGSSIRPGSQDNLSSVGTK 1016
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2RKZ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G242600 PE=4 SV=1) HSP 1 Score: 1109.36 bits (2868), Expect = 0.000e+0 Identity = 686/850 (80.71%), Postives = 741/850 (87.18%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXX-------DQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGT-AKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANSLSGSSSSSTPSKRATREKSSNLISHSSINHNGPLTRARQGAPSGNLALGLGSGFGGAKLEERILVKESVKAEDLEELNKASEELEALEAKIEAEFEAVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFN DD NIDTNSKET+ PA + DET+V K+VSE TE+KTT + DQ +T P++ SKPEDEKE SEE S+ +TGTD+K ET KPE+M+ KDG + ENCA+ A+REAFEAVGYNLTSES LSFADVGNP+MALAGFFA L GP I AAS+Q+SLK+LSG+ PNIQLAARNCF+LEDPPD+ KE T S SV ND GN+ AQNV++SE++SLK DQKSS S+H D+N E SL EE TS SPN L+TDKKE AT++E KKA NQSKDH+P V R S+ + SQV PS+ EETGGK T A+E SQ + VKEV+MS+SV L+KNEP DAAAS+PV ELSEP +A +N+ET S SPS +KNEQ+ VK GE ++P AS+D+++VS SQPSERSEP QPVTSNSVNENG T Sbjct: 1 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANSLSGSSSSSTPSKRATREKSSNLISHSSINHNGPLTRARQGAPSGNLALGLGSGFGGAKLEERILVKESVKAEDLEELNKASEELEALEAKIEAEFEAVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNSDD-NIDTNSKETSAPAVVTDETSVPKDVSEATETKTTSQEDQVPQEDQTQTTPVDASKPEDEKEKRESEEMSKPETGTDIKCAPETSKPEEMDEAKDGQDTKENCAIMALREAFEAVGYNLTSESTLSFADVGNPIMALAGFFARLAGPKIGAASAQASLKALSGSSPNIQLAARNCFLLEDPPDDKKEQTGSESVVNDVGNQDAQNVENSENKSLKEDKSTPVLDQKSSSSNHADQNAETSLPEEKVTSASPNCLSTDKKEPGTSATSKEAKKA--------NQSKDHEPGVMRGSDNLASQVPPSSAEETGGKETSAQESSQRTEVVKEVEMSESVPLEKNEPSDAAASEPVAELSEPTEALKNVETVSGSPSGAKNEQQPVKSSSGGEISQPTKASNDIEMVSDSQPSERSEPQQPVTSNSVNENGTIT 841 HSP 2 Score: 266.929 bits (681), Expect = 5.180e-70 Identity = 153/188 (81.38%), Postives = 167/188 (88.83%), Query Frame = 1 Query: 2947 FADKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D I+EGKS++H STE +D+SSIDK+KRAAVTALSAAAVKAKLLADQEEDQIR+LTTSLIEKQ KMEAKL FFNEMEG++MRVKEQLDRSRQ+LYHERTQIIAARLGLPASSSRAMPP N ANR+ATN+ANSVARPPM A RPP+SRPMG M PT SNP+VS TVAGSSIR SQDNLSSV TK Sbjct: 840 ITDVIKEGKSESHTSTETKDDSSIDKVKRAAVTALSAAAVKAKLLADQEEDQIRKLTTSLIEKQFSKMEAKLGFFNEMEGLMMRVKEQLDRSRQKLYHERTQIIAARLGLPASSSRAMPPANTANRIATNYANSVARPPMRTTAARPPMSRPMGPMAPTSSNPFVSTTVAGSSIRRASQDNLSSVRTK 1027
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0B0NXU7_GOSAR (SWI/SNF complex subunit SWI3D-like protein OS=Gossypium arboreum GN=F383_21812 PE=4 SV=1) HSP 1 Score: 1102.43 bits (2850), Expect = 0.000e+0 Identity = 683/850 (80.35%), Postives = 740/850 (87.06%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXX-------DQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGT-AKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDAGNSPAGPSSAELEPATTRRR GAQKRKANSLSGSSSSSTPSKRATREKSSNLISHSSINHNGPLTRARQGAPSGNLALGLGSGFGGAKLEERILVKESVKAEDLEELNKASEELEALEAKIEAEFEA+RSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSV+IESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFN DD NIDTNSKET+ PA + DET+V K+VSE TE+KTT + DQ +T P++ SKPEDEKE SEE S+ KTGTD+K ET KPE+ + KDG + ENCA+ A+REAFEAVGYNLTSES LSFADVGNPVMALAGFFA L GP I AAS+Q+SLK+LSG+ PNIQLAARNCF+LEDPPD+ KE T S SV ND GN+ AQNV++SE++SLK DQKSS S+H D+N E SL EE TS SPN L+TDKKE AT++E KKA +QSKDH+P V R S+ + SQV S+ EET GK T A+E SQ + VKEV+MS+SV L+KNEP DAAAS+PV ELSEPA+AS+N+ET S SPSR+KNEQ+ VK GE ++P AS+D+++VS SQPSERSE QPVTSNSVNENG +T Sbjct: 1 MEEKRRDAGNSPAGPSSAELEPATTRRRVGAQKRKANSLSGSSSSSTPSKRATREKSSNLISHSSINHNGPLTRARQGAPSGNLALGLGSGFGGAKLEERILVKESVKAEDLEELNKASEELEALEAKIEAEFEALRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVKIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNSDD-NIDTNSKETSAPAVVTDETSVPKDVSEATETKTTSQEDQVPQEDQTQTTPVDASKPEDEKEKRESEEMSKPKTGTDIKCAPETSKPEETDEAKDGEDTKENCAIMALREAFEAVGYNLTSESTLSFADVGNPVMALAGFFARLAGPKIGAASAQTSLKALSGSSPNIQLAARNCFLLEDPPDDKKEQTGSESVVNDAGNQDAQNVENSENKSLKEDKSTPVLDQKSSSSNHADQNAETSLPEEKVTSASPNCLSTDKKEPGTCATSKEAKKA--------SQSKDHEPGVMRGSDNLASQVPASSAEETWGKETSAQESSQRTEVVKEVEMSESVPLEKNEPADAAASEPVAELSEPAEASKNVETVSGSPSRAKNEQQPVKSSSGGELSQPTKASNDIEMVSDSQPSERSELQQPVTSNSVNENGTST 841 HSP 2 Score: 267.7 bits (683), Expect = 2.701e-70 Identity = 153/186 (82.26%), Postives = 165/186 (88.71%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D I EGKS++H STE +D+SSIDK+KRAAVTALSAAAVKAKLLA QEEDQIRQLTTSLIEKQ KMEAKL FFNEMEG++MRVKEQLDRSRQ+LYHERTQIIAARLGLPASSSRAMPP N ANR+ATN+ANSVARPPM A RPP+ RPMG M PT SNP+VS TVAGSSIRP SQDNLSSV TK Sbjct: 842 DVITEGKSESHTSTETKDDSSIDKVKRAAVTALSAAAVKAKLLAGQEEDQIRQLTTSLIEKQFSKMEAKLGFFNEMEGLMMRVKEQLDRSRQKLYHERTQIIAARLGLPASSSRAMPPANTANRIATNYANSVARPPMRTTAARPPMQRPMGPMAPTSSNPFVSTTVAGSSIRPASQDNLSSVRTK 1027
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A061E077_THECC (Chromatin remodeling complex subunit, putative isoform 1 OS=Theobroma cacao GN=TCM_006905 PE=4 SV=1) HSP 1 Score: 1030.39 bits (2663), Expect = 0.000e+0 Identity = 633/843 (75.09%), Postives = 716/843 (84.93%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXX-XXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTA-KEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDAGNSPAGPSSAE EPA+TRRRAGAQKRKANSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG GSG G KLEE LVK+SV+AEDLEELNKASEE EALEAKIEAEFEAVRSRDSNAHVVPNHCGWFSW K H++EEC+LPSFFNGKSP+RTPDVY+EIRN IMKKFHANPS+QIE KDL D+EVGD+DARQEVLEFLDYWGLINFHPF P DSAV ++D D G+AK DSLLE LF FE IESRP VVP+ NLSTPS+PSGFLPESA+ +DL+R EGP+V+YHCNSCSADCSRKRYHCQKQADFDLC+DCF+N KFGSGMSSSDFILMEP EA GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVF+NC DNNI+ NSKE+ GPAAM+DET+V+K+VSE TESKTT +EDQA+T METSKPEDEKEV S E S+ +TGTDV+ ET KPE+ N K G + ENCAL A+REAFEAVGY LTSES LSFADVGNPVMALAGFFA LVGP IAAAS+QSSLKSLSG+ P+IQLAARNCF+LEDPPD+KEP S SV N NR AQNV++ E++ K DQ++SLS+HGD+NTEVS+ E+ TS SPN+L+TDKKE TNEEDKKANLNESS+I+QSKDHQPS+ + S+ + SQV S++EETGGK T+ +EPSQP +AVKEVDM+DSV L+KNEPCDAA SKPVGELSEPA+A +N+ET SPSR KNEQ VK GE T+P + S+DV++VS SQP ER EP Q VTSN++NENG TT Sbjct: 1 MEEKRRDAGNSPAGPSSAEPEPASTRRRAGAQKRKANSLSGSSSSSTPSKRITREKSNLISHPLINHN-GPLTRARQGAPSGNLALGFGSGSVGGKLEETSLVKDSVRAEDLEELNKASEEWEALEAKIEAEFEAVRSRDSNAHVVPNHCGWFSWTKVHNLEECVLPSFFNGKSPIRTPDVYMEIRNWIMKKFHANPSMQIELKDLSDLEVGDMDARQEVLEFLDYWGLINFHPFIPVDSAVPTSDSD--GMAKMDSLLEKLFRFEAIESRPPVVPRPNLSTPSVPSGFLPESAIAEDLVRPEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCSDCFSNGKFGSGMSSSDFILMEPAEAPGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFYNC-DNNIENNSKESTGPAAMSDETSVSKDVSEKTESKTTPREDQAQTTSMETSKPEDEKEVRVSVETSKPETGTDVEVDPETSKPEETNEAKGGQDTNENCALIALREAFEAVGYILTSESSLSFADVGNPVMALAGFFARLVGPKIAAASAQSSLKSLSGSSPSIQLAARNCFLLEDPPDDKEPNGSESVVNGMANRDAQNVENLEEKGPKEDKSSPVLDQQNSLSNHGDQNTEVSVPEDKVTSASPNELSTDKKEPDTLTTNEEDKKANLNESSVIDQSKDHQPSLMKESDNLASQVSLSSVEETGGKETSVEEPSQPTEAVKEVDMTDSVPLEKNEPCDAAVSKPVGELSEPAEALQNVETVPGSPSRGKNEQPPVKSTSVGEPTQPTEVSNDVEMVSDSQPLERIEPHQSVTSNNLNENGATT 839 HSP 2 Score: 267.7 bits (683), Expect = 2.711e-70 Identity = 154/186 (82.80%), Postives = 166/186 (89.25%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D+I+EGK+KNHD+ E + SIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKME KL+ FNEMEGV+MRVKEQLDRSRQRLYHER QIIAARLGLPASSSRAMPP N ANR+A NFANSVARPPMSM APRPP+SRP+G M PTP N +VS TVAGSSIRP S DNLSSV +K Sbjct: 840 DEIKEGKNKNHDAAETIGDLSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKMETKLASFNEMEGVIMRVKEQLDRSRQRLYHERAQIIAARLGLPASSSRAMPPTNTANRIAANFANSVARPPMSMTAPRPPMSRPIGPMAPTPPNLFVSTTVAGSSIRPASSDNLSSVESK 1025
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2TQ48_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G152400 PE=4 SV=1) HSP 1 Score: 848.581 bits (2191), Expect = 0.000e+0 Identity = 503/610 (82.46%), Postives = 528/610 (86.56%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVS--ADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVAN 1939 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKLEE LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTPD Y EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFPP SAV + DGD DG+ +KDSLLENLFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTV K+VSETTESKTTQEDQA+T PMETSKPEDEKEV GSEEPSETKTGTD KGVKETLKPEDMNV KDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+ N Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLEETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWTKIHHLEESILPSFFNGKSPNRTPDAYKEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPPAGSAVPNPNGDGDGDGMTEKDSLLENLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVPKDVSETTESKTTQEDQAQTTPMETSKPEDEKEVRGSEEPSETKTGTDAKGVKETLKPEDMNVRKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKRYVN 602
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A067E5G1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001648mg PE=4 SV=1) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 442/802 (55.11%), Postives = 558/802 (69.58%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAEL-------EPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQ--XXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGD------CDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXD-QAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES----TNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVD-MSDSVQLKKNEPCDAAASKPVGELSEPADASENLETAS 2434 MEEKRR+AG PA SSA EPA++RRRAGA KRKA++LS +++SSTPSKR TREK+ + ++ GPLTRARQ + A G G G KLE ++ E +EELNKASEE ALEAKIEA+FEA+RSRDSN HVVP HCGWFSW K H +EE LP+FFNGKS RTPD+Y+EIRN IMKKFH+NP QIE KDL ++EVG LDARQEV+EFLDYWGLINFHPFP +S+V ++DGD D AKK SLLE L+ FE I++ P V P +++ P++PSG PESA+ ++L +LEGP+V+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN KFGS MSSSDFILM PGEA+G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED+F +CDD ++D N KET A N +T+ +K+V+E +ESKT + Q +T PMETSKPED E+ E+ S+ K +DVK ++ LK ED + K G E EN AL A+REAFEAVGY T E+ SFA+VGNPVMALA F L GP++ AS++SSLKS+SG P +QLAA++CF+LEDPP D+KE S S+ + +R Q + ED ++K D++ + HGD+ E S+ EE + S N+ ++K N T E+D+ +LNE S KD+QPS+ SN + S+VL S+ +E+ G+G++ EP+ P K+ +SDS+ KNEP S V E S P+ + +++ S Sbjct: 1 MEEKRREAGAQPAATSSAAAGAESAASEPASSRRRAGAHKRKASALSATNASSTPSKRMTREKNLVAHTPIYNHN-GPLTRARQGPTTLAAAAAFGGAPGSAGGKLE---AARDDSTFEAIEELNKASEEWAALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFPHVESSVANSDGDRMTDADSDAAAKKGSLLEKLYRFEEIKAGPPVAPMPSITFPAVPSGLFPESAIAEELAKLEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDD-DVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKES-GEGSSGEPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPSKLTNDVDMVS 796 HSP 2 Score: 202.601 bits (514), Expect = 1.391e-49 Identity = 128/186 (68.82%), Postives = 144/186 (77.42%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D+ +G+ + HDS E +++ IDKLK AAVTALSAAAVKAKLLA QEEDQIRQL TSLIEKQL K+EAKL+FFNEM+ V MRV+EQL+RSRQRLY ER II ARLG SR M P ANR FANSVARPPMSM +PRPP+SRPM + TPSNP+ S T AGSSIRP SQDNLSSVG K Sbjct: 857 DQNRDGQDEKHDSKETKNDQYIDKLKHAAVTALSAAAVKAKLLACQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQERALIIQARLG----PSRVMQPSVPANRNPMTFANSVARPPMSMTSPRPPISRPMVPQSSTPSNPFGSTTTAGSSIRPSSQDNLSSVGMK 1038 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 24
Pages
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092725 ID=g.barbadense_cottongen_reftransV1_0092725; Name=g.barbadense_cottongen_reftransV1_0092725; organism=Gossypium barbadense; type=contig; length=4555bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|