g.barbadense_cottongen_reftransV1_0092725, g.barbadense_cottongen_reftransV1_0092725 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3D_ARATH (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=3) HSP 1 Score: 480.715 bits (1236), Expect = 2.020e-146 Identity = 367/798 (45.99%), Postives = 485/798 (60.78%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATT-----RRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSE----TKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPD-EKEPTCSRSVANDT-GNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSI-----INQSKDHQPSVTRVSNTITSQVLPST-------LEETGGKG-----------------TAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGE 2389 MEEKRRD+ + A S+ PA+ RRR G KRKAN+L GS+ S+ + + +++ S HNGPLTRARQ A ++ + + K ++ EE NKA E EALEAKIEA+FEA+RSRDSN HVVPNHCGWFSW+K H +EE LPSFFNGK RT +VY EIRN IM KFH+NP++QIE KDL ++EVGD +A+QEV+EFLDYWGLINFHPFPP D+ ++D D + K+SLL +L+ F+V E+ P +V K + + PSG P+ D+LL+ EGP+V+YHCNSCSADCSRKRYHC KQADFDLCT+CFN+ KF S MSSSDFILMEP EA G+ GKWTDQETLLLLEALE++KENWNEIAEHVATKTKAQC+LHFLQMPIED F + D D SK+T A D+ +V K+ E E+K ++ K E +PED E S+E S+ ++ +++ ++T K E + EA EN AL A+ EAFE VG++ T E+ SFAD+GNPVM LA F L G ++A AS+++S+KSL + LA R+C++LEDPPD +K+PT S+S + D GN +D S K DQ S + EVSL ++ P TD + T + +EE + + E+S + + + +P T S + PS L+E G +A + SQ P+A ++V+M D++Q +K+ P D K VGE Sbjct: 1 MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLTREKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKS----EVLNVAVGADGEKPKEEEERNKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHD--DLGDKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYK-DPISKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMK--EVPEPEDGNEEKVSQESSKPGDASEETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNS-GMLLATRHCYILEDPPDNKKDPTKSKSCSADAEGN---------DDNSHKDDQPEEKSKKAE---EVSLNSDDREMPD-----TDTGKETQDSVSEEKQPGSRTENSTTKLDAVQEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQSTVSQSAADASQ-PEASRDVEMKDTLQSEKD-PEDVV--KTVGE 767 HSP 2 Score: 140.969 bits (354), Expect = 2.764e-32 Identity = 86/140 (61.43%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 3088 QEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPAS-SSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSI-RPGSQDNLSSV 3501 QEEDQIRQL+ SLIEKQLHK+EAKLS FNE E + MRV+EQL+RSRQRLYHER QIIAARLG+P S SS+A P NR+A NFAN RPPM M PR P P P + + T+ GSS PGS DN+SSV Sbjct: 852 QEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQRLYHERAQIIAARLGVPPSMSSKASLP---TNRIAANFANVAQRPPMGMAFPR--PPMPRPPGFPVPGSFVAATTMTGSSDPSPGS-DNVSSV 985
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3C_ARATH (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.383e-42 Identity = 110/285 (38.60%), Postives = 161/285 (56.49%), Query Frame = 2 Query: 542 AHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVG-DLDARQEVLEFLDYWGLINF------HPFPPGDSAVVSAD--GDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASG-LSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFN 1366 HV+P H WF+ +E ++P FF+GKSP TP+ Y+E RN+I+ K+ NP + D + G D++ V FLD+WG+IN+ HP P D + V D G+ + + + +++L F+ +P+ K S+PS +S LD +R+ D HCN CS + QK+ D LC DCF++ +F G S DF+ ++P + G G WTDQETLLLLEA+ELY ENW +IA+HV +K+KAQCILHFL++P+ED + Sbjct: 175 VHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSIDSLIKFD----KPNCRHKGGEVYSSLPS-LDGDSPDLD--IRIREHLCDSHCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLD 452 HSP 2 Score: 60.4622 bits (145), Expect = 1.352e-7 Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSS 3291 D EE +I++L+ +++ QL +ME KL F E+E ++M+ EQ++++RQR ER ++++AR G P S Sbjct: 599 DHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAERARMLSARFGSPGGIS 667
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SSR2_SCHPO (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 2.909e-29 Identity = 95/286 (33.22%), Postives = 145/286 (50.70%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSA--VVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEG-------------PSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVF 1360 +VP++ GWF K H +E P FFNGKSP++TP +Y + R+ ++ + P+ + VGD+ A V FL+ WGLIN+ P A + G I+ + + E++ P P + S L E L +E P VD C +C +CS+ YH K +D+C +C+ +F S +SSDF+ M+ + + W++QETLLLLEA+E Y ++WN+IA HV ++TK QC++HFLQ+PIED + Sbjct: 19 IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVTACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPPISGHVQAISNTPIVTQ-----EMLAQHPP--PSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVDKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPY 297
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3B_ARATH (SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.493e-23 Identity = 83/280 (29.64%), Postives = 131/280 (46.79%), Query Frame = 2 Query: 539 NAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDN 1378 N HV P++ WFSW + E LP FF+ +S + P YL +RNSI+K++ + +I D+ V D+ + + V +FLD WGLIN++ S +E E+ S A S P+ + E+A +CN C A CS + C K D LC C+ + G++SS+F +E E S +W+D+E LLLLEA+ Y ++W ++A HV +T+ C+ F+++P + F D+ Sbjct: 47 NIHV-PSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSIRRVFDFLDSWGLINYNS----------------------SASAKPLKWEEKEAGKSAGDAA-----SEPATTVKETA-------------KRNCNGCKAICSIACFACDKY-DLTLCARCYVRSNYRVGINSSEFKRVEISEE---SKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDS 281
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC1_HUMAN (SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 2.620e-23 Identity = 82/286 (28.67%), Postives = 136/286 (47.55%), Query Frame = 2 Query: 527 SRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNI 1384 + +N ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGL+N+ P + HF V+ PS + +L +P +P+ +L+ + + VD +F L TD ++ + +S +G +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + D ++ Sbjct: 443 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTP--------------HFNVLADTPSGLVPLHLRSPQVPAA----QQMLNFPEKNKEKPVDLQ-------------------NFGLRTDIYSKKTLAKSKGAS-------------AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASL 678
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC1_MOUSE (SWI/SNF complex subunit SMARCC1 OS=Mus musculus GN=Smarcc1 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.678e-23 Identity = 85/298 (28.52%), Postives = 139/298 (46.64%), Query Frame = 2 Query: 527 SRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAA 1420 + +N ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGL+N+ P + HF V+ PS + +L +P +P+ +L+ + + +D +F L TD ++ + +S +G +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + NS + GP A Sbjct: 442 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTP--------------HFNVLADTPSGLVPLHLRSPQVPAA----QQMLNFPEKNKEKPIDLQ-------------------NFGLRTDIYSKKTLAKSKGAS-------------AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE--------NSDASLGPLA 681
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: RSC8_YEAST (Chromatin structure-remodeling complex protein RSC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSC8 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.224e-22 Identity = 89/291 (30.58%), Postives = 136/291 (46.74%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVV--SADGDCDGI-----AKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLD---DLLRLEGPSVD-------YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQ-CILHFLQMPIEDVFF 1363 ++P+ WF K H +E+ P FFN S +TP Y + RN I+ + +P + + D+ + ++ FL+ WGLIN+ P +++ S G + K L EN+ EV E P+ P + V D D L+ S + Y C++C + RYH + D +LC+ CF FG+ SSDFI + E +G S K W+DQE LLLLE +E+Y++ W +IA+HV + + CI FL +PIED + Sbjct: 81 IIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTITAVRRNVAMDVASIVKIHAFLEKWGLINYQIDPRTKPSLIGPSFTGHFQVVLDTPQGLKPFLPENVIKQEV-EGGDGAEPQVK---KEFPVNLTIKKNVYDSAQDFNALQDESRNSRQIHKVYICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRL---ENNGNSVKKNWSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYI 364
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC2_MOUSE (SWI/SNF complex subunit SMARCC2 OS=Mus musculus GN=Smarcc2 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.174e-22 Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFF 1363 ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGLIN+ V A+ + + HF V+ PSG +P L+ + P + + +F L TD + + S +A+ + +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ---------VDAESRPTPMGPPPT-----SHFHVLA--------------DTPSGLVP--------LQPKPPQQSSASQQMLNFPEKGKEKPADMQNFGLRTDMYTKKNVPSK-----------SKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL 649
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC2_HUMAN (SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.258e-22 Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFF 1363 ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGLIN+ V A+ + + HF V+ PSG +P L+ + P + + +F L TD + + S +A+ + +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ---------VDAESRPTPMGPPPT-----SHFHVLA--------------DTPSGLVP--------LQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSK-----------SKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL 649
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3A_ARATH (SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana GN=SWI3A PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.473e-19 Identity = 78/279 (27.96%), Postives = 122/279 (43.73%), Query Frame = 2 Query: 545 HVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSAD------GDCDGI---AKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFL--PESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPI 1348 + +P WF W H +E FF S RTP VY E R+ I+ KF + ++ + VGD++ Q+V FL+ WGLINF + ++S D G GI A +SL RP P L + +G P ++ D L+ P C C C Y K ++C CF N +G ++ DF L+ + WT++E LLLLE++ + ++W I++ V+TK++ CI +++P Sbjct: 13 YTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIEQGTPAGIRVTATPNSL------------RPITAPP--LVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCGERCDSPFYQHNK-GIVNICEKCFKNGNYGENNTADDFKLI-----GNSAAAVWTEEEILLLLESVLKHGDDWELISQSVSTKSRLDCISKLIELPF 271
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: K7LT00_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 545.428 bits (1404), Expect = 4.179e-168 Identity = 395/798 (49.50%), Postives = 510/798 (63.91%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPED-EKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPD-EKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKEST--NFATNEE---DKKANLNESSIINQSKDHQPSVTRVSNTITSQV-LPSTLEETGGKGTAKEP-----------SQPPKAVKEVDM-SDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCS 2440 MEEKRRDA S A S EPAT+RRRAGA KRK +LS S SSS PSKRA R+K+S L + N GPLTRARQ + + + + A + ++ L E K E E LEA IEAEFEA+RSR +NAHVVP HCGWFSW H +E+ +LPSFF+GK+ RT DVY+EIRN IMKKFH+NP+VQIE KD+ + VGD DARQEV+EFLDYWGLINFHPFP DS+V +A D G A+K LLE L+HFE ++ P V + + TP+ SG PES + ++L++ EGP+V+ YHCNSCSADCSRKRYHCQKQADFDLCTDCF+NR+FGSGMSS DFILMEP E +G++GGKWTDQETLLLLEALELYKENWNEIAEHV TKTKAQCILHF+QMPIED F +CDD ++D KETA P A ++++ K+ SE E+ T+ + K TSK ED E +V E P + + G+D K +ET K ED K EA +CA+ A++EAF AVGY+ E SFADVGNPVMALA F AHLVG + A AS+ SS+KS++ P +LAAR CF+LEDPPD +KEPT S + G++ NV ++D+S D K + H ++ E + E+ S +D ++ S+ N E DK +LN + + N D P S TS+ +PS+ ++ + +EP S P + K+ +M SD++ K++P + ++ P E E D+ +++ S S Sbjct: 1 MEEKRRDAAPSAA--DSPASEPATSRRRAGANKRKFGTLSASGSSSAPSKRAARDKASPLFPPAPHN--GPLTRARQTPNNLSASSSAAASAPAAVKRSERAHPSAAESTALAEQLKKESEWETLEAAIEAEFEAIRSRGANAHVVPTHCGWFSWSCIHPIEKQMLPSFFSGKTENRTSDVYMEIRNWIMKKFHSNPNVQIELKDMSQLNVGDSDARQEVMEFLDYWGLINFHPFPSMDSSVATASDD--GEAEKSLLLEKLYHFETLQLCPPVQRSSQM-TPATTSGLFPESTIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHVGTKTKAQCILHFVQMPIEDTFVDCDD-DVDAGCKETADPVATKSDSSMDKDASECIENHTSDGIKDSEK---TSKAEDLEVKVNQKETP-KLQEGSDEKASEETSKSEDAVKVKIDQEADNDCAINALKEAFAAVGYSPGPEGPSSFADVGNPVMALATFLAHLVGSDAAVASAHSSIKSMTRNSPGTELAARCCFLLEDPPDSKKEPTSSERDSKSEGDQDEVNV--NQDKSTLED-KDLPTDHNNKKIESNALEDKGKPASADDGASEIPISSKEQAVVNNECGLDKCHDLNNAKLPN---DQAPGTLHNSGGSTSKAEIPSSSDKAQEETLIEEPCPSVKDRHVSDSLPSETSKDAEMVSDAIPSTKSKPQNPESTNPAHESLETTDSVMDVDGVSNS 780 HSP 2 Score: 180.259 bits (456), Expect = 1.731e-42 Identity = 109/186 (58.60%), Postives = 140/186 (75.27%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D + G D T+ + +SS +K+KRAAV+ L+AAAVKAKLLA+QEEDQIRQLT+ LIEKQLHK+E KL+FFN++E VVMR +E ++RSR +LYHER IIA+RLG+P SSSR +PP NR+ TN ANS+ RP M M PRP +SRP G++ T NP +T AG+S+RP +Q+ LSSVGTK Sbjct: 832 DNADNGAKVEDDGTKTKQDSSFEKVKRAAVSTLAAAAVKAKLLANQEEDQIRQLTSLLIEKQLHKLETKLAFFNDVENVVMRAREHVERSRHKLYHERALIIASRLGIPPSSSRGVPPSIPTNRIPTNIANSLPRPQMMMNPPRPLISRPAGTVA-TIQNPLTPSTAAGNSVRPSNQEKLSSVGTK 1016
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: V7AF01_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G046200g PE=4 SV=1) HSP 1 Score: 542.347 bits (1396), Expect = 1.111e-166 Identity = 352/624 (56.41%), Postives = 432/624 (69.23%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIE-SRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEK-EPTCSRSVANDTGNRGAQNVK 1972 MEEKRRDA S A S EPA++RRRAG KRK+ +L+ S SSS PSKRA R+K+S L N GPLTRARQ S + G+ A + + L E + E E LEA IEAEFEA+RSR +NAHVVP HCGWFSW H +E+ +LPSFFNGK RTPDVY+EIRN IMKKFH+NP+VQIE KD+ + VGD++ARQEV+EFLDYWGLINFHPFP DSAVV+A D DG A+K SLLE L+HFE ++ RP V +++ TP+ SG PES + ++L++ EGP+V+ YHCNSCSADCSRKRYHCQKQADFDLC+DCF+NR+FGSGMSS DFILMEP E +G++GGKWTDQETLLLLEALELYKENWNEIAEHV TKTKAQCI +F+QMPIED F +D N+D KE P A N++++V K+ SE E+ T+ +D+ TSK ED + E+ + + G+D K + T K ED K EA CA+ A++EAF AVGY+ E SFA+VGNPVMALA F AHLVG ++A AS+ SS+KS+S P LAAR CF+LEDPPD K EPT S + G++ NVK Sbjct: 1 MEEKRRDAAPSAA--DSPASEPASSRRRAGGNKRKSAALNASGSSSAPSKRAARDKASPLHPPPLHN--GPLTRARQTPNSVAASSSAGASTPAAVKHSERTHLSAADSAALAEQLRKESEWETLEAAIEAEFEAIRSRGANAHVVPTHCGWFSWLYIHEIEKQMLPSFFNGKIENRTPDVYMEIRNWIMKKFHSNPNVQIELKDMSQLNVGDMEARQEVMEFLDYWGLINFHPFPSMDSAVVTAMED-DGDAEKSSLLEKLYHFETLQLCRP--VQRSSQMTPATASGLFPESTIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCSDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHVGTKTKAQCISYFVQMPIEDTFAEFED-NVDAGCKEPTDPVATNNDSSVGKDASECIENDTSDQDK-------TSKAEDVEVKASQEDNLKLQEGSDEKASEGTSKSEDAVKGKSDQEAGNECAINALKEAFAAVGYSPGPEGPSSFAEVGNPVMALATFLAHLVGTDVAVASAHSSIKSMSRNSPGTDLAARCCFLLEDPPDNKNEPTSSERDSKSEGDQNEVNVK 609 HSP 2 Score: 176.022 bits (445), Expect = 3.766e-41 Identity = 84/142 (59.15%), Postives = 109/142 (76.76%), Query Frame = 1 Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 +QEEDQIRQLT+ LIEKQL K+E KL+FFN++E VV+R +E ++RSR +LYHER IIA+RLG+PASSSR +P + NR+ TN ANS+ RP M M RP +SRP G++ T NP S+T AG+S+RP +Q+ LSSVGTK Sbjct: 890 NQEEDQIRQLTSLLIEKQLLKLETKLAFFNDVENVVLRAREHVERSRHKLYHERALIIASRLGIPASSSRGVPATVSTNRIPTNIANSLPRPQMMMSPQRPLISRPAGTVATTLQNPLASSTAAGNSVRPSNQEKLSSVGTK 1031
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0A0K5Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G267920 PE=4 SV=1) HSP 1 Score: 536.569 bits (1381), Expect = 1.271e-166 Identity = 355/755 (47.02%), Postives = 480/755 (63.58%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPS-SAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXX----XXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCS-RSVANDTG--NRGAQNVKHSEDESLKGDQKSSLSHHGDEN-TEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNE 2353 ME+KRRD N P+ + S EP ++RRRAGA KRKA++L S++ S PSKR TR+KS+ + GP TRAR G + A G G+ + L+ V+ D A +EA +EA++SR +N HVVPNHCGWFSW K H +EE L +FF+GK+ R+PD+Y+EIRN IMKKFHANPS QIESKDL ++EVG+LDARQEV+EFL++WGLINFHPFP DS + D + +KDSL+E LFHFE +ES PSVVPK N +T + P L ES + ++++R EGPSV+YHCNSCSADCSRKRYHCQK+ADFDLC++CFNN KF S MSSSDFILME G SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED F + N++ KET P + ++++V +++E+ ++K T ++ + + + + E +VG E DV+G +K E + D + +E+ AL A+REAFEA+GY LT E LSFADVGNPVMALA F A LVG ++A+AS++ SLKS S P+++LA R+CF+LEDPPD+K+ + SV N N Q+ K SED S +LS + N + S+ +E + + +D + TN ++ L E ++ KD + + + S + S++ + +E +G T ++P + + +V MSD +++E Sbjct: 1 MEDKRRDTANIPSNTTDSPSSEPPSSRRRAGAHKRKASALGASNTLSAPSKRVTRDKSALSHPPNHN---GPFTRARLGPNNVAGAASAGGLAPGSVKADGSLLHSEVQRGDALLSAAEELNKATRLANLEASFEVDYEAIKSRGANVHVVPNHCGWFSWTKVHPIEERTLSTFFSGKAANRSPDIYIEIRNWIMKKFHANPSTQIESKDLSELEVGELDARQEVMEFLEHWGLINFHPFPATDSI---STNDVNDENQKDSLVEKLFHFETLESCPSVVPKINATT-AAPPRLLRESTISEEIVRPEGPSVEYHCNSCSADCSRKRYHCQKRADFDLCSECFNNGKFDSDMSSSDFILMESAGVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLES-EGNVEVGGKETIAPPLIENDSSVPSDITESVDNKATGKEASSVENASSKEDTGEVKVGQDNPKLE-----DVEGKASLVKSESKD---DDEKVSEDIALNALREAFEAIGYVLTPEHSLSFADVGNPVMALAAFLARLVGSDVASASARFSLKSTSQKSPSLELATRHCFILEDPPDDKKAQDNLESVDNVEAQKNDKEQSAKQSEDNSTSILDDRALSTNNSNNKSGESVTKETTENGNSSDAIREHDPITNHGSDTSSNLKELGEKELL---KDEKTGIVKESENLESKLTSNPVETSGEGTTGEKPLESTMSSNDVHMSDLQHAERSE 736
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: F6HQL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02410 PE=4 SV=1) HSP 1 Score: 537.339 bits (1383), Expect = 6.142e-165 Identity = 336/683 (49.19%), Postives = 442/683 (64.71%), Query Frame = 2 Query: 521 VRSRDSNAHVVPNH-----------CGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXD-QAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGA---QNVK-----------------HSEDESLKGDQKSSLSHHGDENTEVSLREENATSP-SPNDLTTDKKES---------------------TNFATNEED-KKANLNESSIINQS------KDHQPSVTRVSNTITSQ--VLPSTLEETGGKGTAKEPSQPPKAVKEVD-MSDSVQLKKNEPCDAAAS 2374 +RSRD+N HVVP+ GWFSW K H +E +PSFFNGKS R PD+Y +IR+ I+K+FH NP+ QIE KDL ++E+GDLDARQEV+EFLDYWGLINFHPF P +S+V A+GD D + DS +E L+ F++++S P VVPKAN+S P+M SG PESA +++L+R EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCT+CFNN+KFGS MSSSDFILMEP EA G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED F +C+D + N +E A P + N++++V K++ E+TESKT + + METSKPE + E S+ ++ + ET KPE N KD E E CAL A+REAFEAVG T + L+F D GNPVMALA F LVG A+A+ SSLKS+S P +QLAAR+C++LEDPPD+ KE S S + ++ A +N+K EDE+ K + + L+ + +V+ REE++ S +D D+ E+ + A E D +N +E I++QS KD P+ S+ +T + +LPS+++E+G + K+ SQP +A K+VD + +S+ L+ EP + S Sbjct: 149 IRSRDANVHVVPSSSGEIHLFTTLSTGWFSWTKVHPLEAQAMPSFFNGKSENRNPDMYKQIRDWIIKRFHGNPNTQIEVKDLSELEIGDLDARQEVMEFLDYWGLINFHPFLPAESSV--ANGDDDTAKQLDSSVEKLYRFDMVQSCPPVVPKANMSAPTMASGLFPESAFVEELVRSEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTECFNNQKFGSDMSSSDFILMEPAEAPGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFIDCED-ETNVNPQENADPVSANNDSSVPKDIPESTESKTDVSEGHPPSSAMETSKPEG-PPLSSPMETSKPESQPPPSPM-ETSKPEGGNEMKDNQETGEACALKALREAFEAVGSLPTPGAPLTFTDAGNPVMALAVFLTQLVGSGRASAAVHSSLKSMSSNSPGMQLAARHCYILEDPPDDKKEQVGSESATAEMVDQDAHKDENMKDVNEKDEKQKDVNQKDASQEDENQKHENQKELNQKEENQKDVNQREEHSISILEGSDTLKDQNENKIEDSVPEEKLSVPPNGECTEKSLAAKEPDVVVSNDSEPGILSQSSNSDLPKDCPPNSVDKSDDLTPKAGLLPSSMKESGDGASVKDHSQPSEAPKDVDTVPESLPLQTKEPLQSLTS 826 HSP 2 Score: 200.29 bits (508), Expect = 7.763e-49 Identity = 124/186 (66.67%), Postives = 146/186 (78.49%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D+ +EGKS++HDS++ + + SIDK+KRAA +ALSAAAVKAKLLA+QEEDQI+Q T LIEKQLHK+E KL+FFNEME V+ RV+EQ+DRSRQRLYHER QIIAARLG SSSR P NR +F SV RPPM M + RPP+SRPM M P+ N VS+TVAGSSIRP SQD LSSVGTK Sbjct: 839 DQTKEGKSESHDSSKTKPDPSIDKIKRAATSALSAAAVKAKLLANQEEDQIQQFATLLIEKQLHKLETKLAFFNEMESVITRVREQMDRSRQRLYHERAQIIAARLGFAGSSSRPTAPSLPINRPGMSFPTSVPRPPMGMTSQRPPMSRPM-MMAPSSLNTLVSSTVAGSSIRPPSQDKLSSVGTK 1023
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A022RC06_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a000855mg PE=4 SV=1) HSP 1 Score: 535.028 bits (1377), Expect = 7.594e-165 Identity = 367/765 (47.97%), Postives = 466/765 (60.92%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSS-AEL---EPATTRRRAGAQKRKA-------NXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSA--VVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNID---------TNSKETAGPAAMND-ETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEK----EPTCSRSVANDTGNRGAQNVKHSE--DES---------LKGDQ----KSSLSHHGDENTEVSLREEN-ATSPSPN--DLTTDKKESTNFATNEEDKKANLNESSIINQS---KDHQPSVTRVSNTITSQVLPSTLEETGG 2266 ME+KRRD + PSS AE EP T+RRR G QKRK+ S+S T SKR REK + + GPLTRAR + N + + A++ E + KAE +++ SE EALEAKIEAE++A+ SRD+NAHVVP H GWFSW K H +EE +LPSFFNGKS RTP++Y EIRN IMK+FH NP+ QIE K L ++ VGD+D RQEV+EFLDYWGLIN+HPFP + A +V AD + D I K DSL+E LF FE +ES +VP+ + P+M SG LPES + D+L++ EGPSV+YHCNSCS DCSRKRYHCQKQADFDLC DCFNN KFGS MS SDFILMEP EA G+SGG WTDQETLLLLEA+E++K+NW+EIAEHVATKTKAQCILHF+QMPIED FFN D N D ++S E + P A +D +T + T ++Q + PME SKP++ KE+ G GLE ++ AL A+ EAFEAVGY + E LSFA GNPVMALA F LV PNIA AS +S LKSLS C + QLAAR+CF LEDPP++ +P + +V N+ KH+E D++ L+ D+ K SL DE T+ + +++ TSPS + D + KE TNEE + + E S N KD + S+ S+T ++ P T++E+ G Sbjct: 1 MEDKRRDLAGIQSQPSSMAETPPSEPPTSRRRGGGQKRKSASINNSGGGGGSSTSQMTSSKRQAREKLPPVPFPPIHMN-GPLTRARVQPYNTNSLSEVSAVKSEAEIGEA-----AAKAE----MSRVSENWEALEAKIEAEYDAIVSRDANAHVVPIHAGWFSWTKIHPLEERMLPSFFNGKSESRTPEIYTEIRNWIMKRFHHNPNEQIELKHLNELTVGDMDVRQEVMEFLDYWGLINYHPFPRNEPAAMLVDADSNKDEIVKMDSLVEKLFQFESVESWTPIVPRMTTAIPAMSSGLLPESVIADELVKSEGPSVEYHCNSCSGDCSRKRYHCQKQADFDLCADCFNNGKFGSDMSPSDFILMEPAEAGGVSGGNWTDQETLLLLEAIEIFKDNWSEIAEHVATKTKAQCILHFVQMPIEDAFFNHGDENNDAPKENVVPVSDSTEISAPKADDDNDTPLKDVPDITENQGGATDNQDSSCPMEISKPDEVKELDG------------------------------GLEDGKSFALKALNEAFEAVGYLPSPEESLSFAKAGNPVMALAAFLVRLVEPNIANASVRSLLKSLSSNCSSEQLAARHCFPLEDPPEDMKDVVDPEGAATVTNEHEEVQKDKTKHAEKLDKTPDSVADGINLRDDENDRSKDSLIEENDEKTDTTSKDQKPVTSPSGDCADRSDTLKEPNGMVTNEETQPVSKTEPSSSNLEQVPKDGEESLVAASHT---ELQPDTVKESEG 722 HSP 2 Score: 147.902 bits (372), Expect = 1.332e-32 Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = 1 Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANR-----VATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 DQEEDQI QL+TSL+EKQL+K+EAKL+FFN+ME VVMRVKEQLDRS+QRL+HER IIA R G+ +SS+R PNA N N N +RP M M + RPP+SRPM + P P N ++ + GSS++P + D LSSV K Sbjct: 820 DQEEDQILQLSTSLVEKQLYKLEAKLAFFNDMENVVMRVKEQLDRSKQRLFHERAHIIATRFGM-SSSNR----PNAQNLPPNRPPINNVPNMASRPFMGMNSLRPPISRPMMTANPAP-NSFMPGSATGSSVQPNA-DKLSSVSMK 959 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 24
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BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092725 ID=g.barbadense_cottongen_reftransV1_0092725; Name=g.barbadense_cottongen_reftransV1_0092725; organism=Gossypium barbadense; type=contig; length=4555bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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