g.barbadense_cottongen_reftransV1_0092725, g.barbadense_cottongen_reftransV1_0092725 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092725
Unique Nameg.barbadense_cottongen_reftransV1_0092725
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length4555
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3D_ARATH (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=3)

HSP 1 Score: 480.715 bits (1236), Expect = 2.020e-146
Identity = 367/798 (45.99%), Postives = 485/798 (60.78%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPSSAELEPATT-----RRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSE----TKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPD-EKEPTCSRSVANDT-GNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSI-----INQSKDHQPSVTRVSNTITSQVLPST-------LEETGGKG-----------------TAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGE 2389
            MEEKRRD+  + A   S+   PA+      RRR G  KRKAN+L GS+  S+   +    +   +++  S  HNGPLTRARQ       A          ++    +  +  K ++ EE NKA  E EALEAKIEA+FEA+RSRDSN HVVPNHCGWFSW+K H +EE  LPSFFNGK   RT +VY EIRN IM KFH+NP++QIE KDL ++EVGD +A+QEV+EFLDYWGLINFHPFPP D+   ++D D   +  K+SLL +L+ F+V E+ P +V K   +  + PSG  P+    D+LL+ EGP+V+YHCNSCSADCSRKRYHC KQADFDLCT+CFN+ KF S MSSSDFILMEP EA G+  GKWTDQETLLLLEALE++KENWNEIAEHVATKTKAQC+LHFLQMPIED F +  D   D  SK+T   A   D+ +V K+  E  E+K   ++    K  E  +PED  E   S+E S+    ++   +++  ++T K E     +   EA EN AL A+ EAFE VG++ T E+  SFAD+GNPVM LA F   L G ++A AS+++S+KSL      + LA R+C++LEDPPD +K+PT S+S + D  GN         +D S K DQ    S   +   EVSL  ++   P      TD  + T  + +EE +  +  E+S      + + +  +P  T  S      + PS        L+E    G                 +A + SQ P+A ++V+M D++Q +K+ P D    K VGE
Sbjct:    1 MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLTREKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKS----EVLNVAVGADGEKPKEEEERNKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHD--DLGDKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYK-DPISKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMK--EVPEPEDGNEEKVSQESSKPGDASEETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNS-GMLLATRHCYILEDPPDNKKDPTKSKSCSADAEGN---------DDNSHKDDQPEEKSKKAE---EVSLNSDDREMPD-----TDTGKETQDSVSEEKQPGSRTENSTTKLDAVQEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQSTVSQSAADASQ-PEASRDVEMKDTLQSEKD-PEDVV--KTVGE 767          

HSP 2 Score: 140.969 bits (354), Expect = 2.764e-32
Identity = 86/140 (61.43%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 3088 QEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPAS-SSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSI-RPGSQDNLSSV 3501
            QEEDQIRQL+ SLIEKQLHK+EAKLS FNE E + MRV+EQL+RSRQRLYHER QIIAARLG+P S SS+A  P    NR+A NFAN   RPPM M  PR     P     P P +   + T+ GSS   PGS DN+SSV
Sbjct:  852 QEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQRLYHERAQIIAARLGVPPSMSSKASLP---TNRIAANFANVAQRPPMGMAFPR--PPMPRPPGFPVPGSFVAATTMTGSSDPSPGS-DNVSSV 985          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3C_ARATH (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.383e-42
Identity = 110/285 (38.60%), Postives = 161/285 (56.49%), Query Frame = 2
Query:  542 AHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVG-DLDARQEVLEFLDYWGLINF------HPFPPGDSAVVSAD--GDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASG-LSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFN 1366
             HV+P H  WF+      +E  ++P FF+GKSP  TP+ Y+E RN+I+ K+  NP   +   D   +  G D++    V  FLD+WG+IN+      HP P  D + V  D  G+ +  +   + +++L  F+    +P+   K      S+PS    +S  LD  +R+     D HCN CS       +  QK+ D  LC DCF++ +F  G S  DF+ ++P +  G   G  WTDQETLLLLEA+ELY ENW +IA+HV +K+KAQCILHFL++P+ED   +
Sbjct:  175 VHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSIDSLIKFD----KPNCRHKGGEVYSSLPS-LDGDSPDLD--IRIREHLCDSHCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLD 452          

HSP 2 Score: 60.4622 bits (145), Expect = 1.352e-7
Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSS 3291
            D EE +I++L+ +++  QL +ME KL  F E+E ++M+  EQ++++RQR   ER ++++AR G P   S
Sbjct:  599 DHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAERARMLSARFGSPGGIS 667          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SSR2_SCHPO (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 2.909e-29
Identity = 95/286 (33.22%), Postives = 145/286 (50.70%), Query Frame = 2
Query:  548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSA--VVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEG-------------PSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVF 1360
            +VP++ GWF   K H +E    P FFNGKSP++TP +Y + R+ ++  +   P+  +         VGD+ A   V  FL+ WGLIN+   P    A  +    G    I+    + +     E++   P   P     + S     L E      L  +E              P VD  C +C  +CS+  YH  K   +D+C +C+   +F S  +SSDF+ M+  + +      W++QETLLLLEA+E Y ++WN+IA HV ++TK QC++HFLQ+PIED +
Sbjct:   19 IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVTACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPPISGHVQAISNTPIVTQ-----EMLAQHPP--PSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVDKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPY 297          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3B_ARATH (SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.493e-23
Identity = 83/280 (29.64%), Postives = 131/280 (46.79%), Query Frame = 2
Query:  539 NAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDN 1378
            N HV P++  WFSW   +  E   LP FF+ +S  + P  YL +RNSI+K++  +   +I   D+    V D+ + + V +FLD WGLIN++                       S       +E  E+  S    A     S P+  + E+A               +CN C A CS   + C K  D  LC  C+    +  G++SS+F  +E  E    S  +W+D+E LLLLEA+  Y ++W ++A HV  +T+  C+  F+++P  + F    D+
Sbjct:   47 NIHV-PSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSIRRVFDFLDSWGLINYNS----------------------SASAKPLKWEEKEAGKSAGDAA-----SEPATTVKETA-------------KRNCNGCKAICSIACFACDKY-DLTLCARCYVRSNYRVGINSSEFKRVEISEE---SKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDS 281          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC1_HUMAN (SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 2.620e-23
Identity = 82/286 (28.67%), Postives = 136/286 (47.55%), Query Frame = 2
Query:  527 SRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNI 1384
            +  +N  ++P++  WF +   H +E   LP FFNGK+  +TP++YL  RN ++  +  NP   + S        GD+ A   V  FL+ WGL+N+   P      +                    HF V+   PS +   +L +P +P+       +L+   + +   VD                     +F L TD ++ +       +S             +G +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED +    D ++
Sbjct:  443 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTP--------------HFNVLADTPSGLVPLHLRSPQVPAA----QQMLNFPEKNKEKPVDLQ-------------------NFGLRTDIYSKKTLAKSKGAS-------------AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASL 678          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC1_MOUSE (SWI/SNF complex subunit SMARCC1 OS=Mus musculus GN=Smarcc1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.678e-23
Identity = 85/298 (28.52%), Postives = 139/298 (46.64%), Query Frame = 2
Query:  527 SRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAA 1420
            +  +N  ++P++  WF +   H +E   LP FFNGK+  +TP++YL  RN ++  +  NP   + S        GD+ A   V  FL+ WGL+N+   P      +                    HF V+   PS +   +L +P +P+       +L+   + +   +D                     +F L TD ++ +       +S             +G +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED +          NS  + GP A
Sbjct:  442 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTP--------------HFNVLADTPSGLVPLHLRSPQVPAA----QQMLNFPEKNKEKPIDLQ-------------------NFGLRTDIYSKKTLAKSKGAS-------------AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE--------NSDASLGPLA 681          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: RSC8_YEAST (Chromatin structure-remodeling complex protein RSC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSC8 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.224e-22
Identity = 89/291 (30.58%), Postives = 136/291 (46.74%), Query Frame = 2
Query:  548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVV--SADGDCDGI-----AKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLD---DLLRLEGPSVD-------YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQ-CILHFLQMPIEDVFF 1363
            ++P+   WF   K H +E+   P FFN  S  +TP  Y + RN I+  +  +P   +    +      D+ +  ++  FL+ WGLIN+   P    +++  S  G    +       K  L EN+   EV E      P+        P     +  V D   D   L+  S +       Y C++C  +    RYH  +  D +LC+ CF    FG+   SSDFI +   E +G S  K W+DQE LLLLE +E+Y++ W +IA+HV    + + CI  FL +PIED + 
Sbjct:   81 IIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTITAVRRNVAMDVASIVKIHAFLEKWGLINYQIDPRTKPSLIGPSFTGHFQVVLDTPQGLKPFLPENVIKQEV-EGGDGAEPQVK---KEFPVNLTIKKNVYDSAQDFNALQDESRNSRQIHKVYICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRL---ENNGNSVKKNWSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYI 364          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC2_MOUSE (SWI/SNF complex subunit SMARCC2 OS=Mus musculus GN=Smarcc2 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.174e-22
Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 2
Query:  548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFF 1363
            ++P++  WF +   H +E   LP FFNGK+  +TP++YL  RN ++  +  NP   + S        GD+ A   V  FL+ WGLIN+          V A+     +    +      HF V+                 PSG +P        L+ + P              + +       +F L TD +  +   S             +A+  +  +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + 
Sbjct:  425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ---------VDAESRPTPMGPPPT-----SHFHVLA--------------DTPSGLVP--------LQPKPPQQSSASQQMLNFPEKGKEKPADMQNFGLRTDMYTKKNVPSK-----------SKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL 649          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC2_HUMAN (SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.258e-22
Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 2
Query:  548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFF 1363
            ++P++  WF +   H +E   LP FFNGK+  +TP++YL  RN ++  +  NP   + S        GD+ A   V  FL+ WGLIN+          V A+     +    +      HF V+                 PSG +P        L+ + P              + +       +F L TD +  +   S             +A+  +  +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + 
Sbjct:  425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ---------VDAESRPTPMGPPPT-----SHFHVLA--------------DTPSGLVP--------LQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSK-----------SKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL 649          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3A_ARATH (SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana GN=SWI3A PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.473e-19
Identity = 78/279 (27.96%), Postives = 122/279 (43.73%), Query Frame = 2
Query:  545 HVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSAD------GDCDGI---AKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFL--PESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPI 1348
            + +P    WF W   H +E      FF   S  RTP VY E R+ I+ KF  +   ++    +    VGD++  Q+V  FL+ WGLINF      +  ++S D      G   GI   A  +SL            RP   P   L    + +G    P ++  D    L+ P     C  C   C    Y   K    ++C  CF N  +G   ++ DF L+        +   WT++E LLLLE++  + ++W  I++ V+TK++  CI   +++P 
Sbjct:   13 YTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIEQGTPAGIRVTATPNSL------------RPITAPP--LVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCGERCDSPFYQHNK-GIVNICEKCFKNGNYGENNTADDFKLI-----GNSAAAVWTEEEILLLLESVLKHGDDWELISQSVSTKSRLDCISKLIELPF 271          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: K7LT00_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 545.428 bits (1404), Expect = 4.179e-168
Identity = 395/798 (49.50%), Postives = 510/798 (63.91%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPED-EKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPD-EKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKEST--NFATNEE---DKKANLNESSIINQSKDHQPSVTRVSNTITSQV-LPSTLEETGGKGTAKEP-----------SQPPKAVKEVDM-SDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCS 2440
            MEEKRRDA  S A   S   EPAT+RRRAGA KRK  +LS S SSS PSKRA R+K+S L   +  N  GPLTRARQ   + + +    +    A          + ++  L E  K   E E LEA IEAEFEA+RSR +NAHVVP HCGWFSW   H +E+ +LPSFF+GK+  RT DVY+EIRN IMKKFH+NP+VQIE KD+  + VGD DARQEV+EFLDYWGLINFHPFP  DS+V +A  D  G A+K  LLE L+HFE ++  P V   + + TP+  SG  PES + ++L++ EGP+V+   YHCNSCSADCSRKRYHCQKQADFDLCTDCF+NR+FGSGMSS DFILMEP E +G++GGKWTDQETLLLLEALELYKENWNEIAEHV TKTKAQCILHF+QMPIED F +CDD ++D   KETA P A   ++++ K+ SE  E+ T+   +   K   TSK ED E +V   E P + + G+D K  +ET K ED    K   EA  +CA+ A++EAF AVGY+   E   SFADVGNPVMALA F AHLVG + A AS+ SS+KS++   P  +LAAR CF+LEDPPD +KEPT S   +   G++   NV  ++D+S   D K   + H ++  E +  E+     S +D  ++   S+      N E   DK  +LN + + N   D  P     S   TS+  +PS+ ++   +   +EP           S P +  K+ +M SD++   K++P +  ++ P  E  E  D+  +++  S S
Sbjct:    1 MEEKRRDAAPSAA--DSPASEPATSRRRAGANKRKFGTLSASGSSSAPSKRAARDKASPLFPPAPHN--GPLTRARQTPNNLSASSSAAASAPAAVKRSERAHPSAAESTALAEQLKKESEWETLEAAIEAEFEAIRSRGANAHVVPTHCGWFSWSCIHPIEKQMLPSFFSGKTENRTSDVYMEIRNWIMKKFHSNPNVQIELKDMSQLNVGDSDARQEVMEFLDYWGLINFHPFPSMDSSVATASDD--GEAEKSLLLEKLYHFETLQLCPPVQRSSQM-TPATTSGLFPESTIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHVGTKTKAQCILHFVQMPIEDTFVDCDD-DVDAGCKETADPVATKSDSSMDKDASECIENHTSDGIKDSEK---TSKAEDLEVKVNQKETP-KLQEGSDEKASEETSKSEDAVKVKIDQEADNDCAINALKEAFAAVGYSPGPEGPSSFADVGNPVMALATFLAHLVGSDAAVASAHSSIKSMTRNSPGTELAARCCFLLEDPPDSKKEPTSSERDSKSEGDQDEVNV--NQDKSTLED-KDLPTDHNNKKIESNALEDKGKPASADDGASEIPISSKEQAVVNNECGLDKCHDLNNAKLPN---DQAPGTLHNSGGSTSKAEIPSSSDKAQEETLIEEPCPSVKDRHVSDSLPSETSKDAEMVSDAIPSTKSKPQNPESTNPAHESLETTDSVMDVDGVSNS 780          

HSP 2 Score: 180.259 bits (456), Expect = 1.731e-42
Identity = 109/186 (58.60%), Postives = 140/186 (75.27%), Query Frame = 1
Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            D  + G     D T+ + +SS +K+KRAAV+ L+AAAVKAKLLA+QEEDQIRQLT+ LIEKQLHK+E KL+FFN++E VVMR +E ++RSR +LYHER  IIA+RLG+P SSSR +PP    NR+ TN ANS+ RP M M  PRP +SRP G++  T  NP   +T AG+S+RP +Q+ LSSVGTK
Sbjct:  832 DNADNGAKVEDDGTKTKQDSSFEKVKRAAVSTLAAAAVKAKLLANQEEDQIRQLTSLLIEKQLHKLETKLAFFNDVENVVMRAREHVERSRHKLYHERALIIASRLGIPPSSSRGVPPSIPTNRIPTNIANSLPRPQMMMNPPRPLISRPAGTVA-TIQNPLTPSTAAGNSVRPSNQEKLSSVGTK 1016          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: V7AF01_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G046200g PE=4 SV=1)

HSP 1 Score: 542.347 bits (1396), Expect = 1.111e-166
Identity = 352/624 (56.41%), Postives = 432/624 (69.23%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIE-SRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEK-EPTCSRSVANDTGNRGAQNVK 1972
            MEEKRRDA  S A   S   EPA++RRRAG  KRK+ +L+ S SSS PSKRA R+K+S L      N  GPLTRARQ   S   +   G+    A          +  +  L E  +   E E LEA IEAEFEA+RSR +NAHVVP HCGWFSW   H +E+ +LPSFFNGK   RTPDVY+EIRN IMKKFH+NP+VQIE KD+  + VGD++ARQEV+EFLDYWGLINFHPFP  DSAVV+A  D DG A+K SLLE L+HFE ++  RP  V +++  TP+  SG  PES + ++L++ EGP+V+   YHCNSCSADCSRKRYHCQKQADFDLC+DCF+NR+FGSGMSS DFILMEP E +G++GGKWTDQETLLLLEALELYKENWNEIAEHV TKTKAQCI +F+QMPIED F   +D N+D   KE   P A N++++V K+ SE  E+ T+ +D+       TSK ED +     E+  + + G+D K  + T K ED    K   EA   CA+ A++EAF AVGY+   E   SFA+VGNPVMALA F AHLVG ++A AS+ SS+KS+S   P   LAAR CF+LEDPPD K EPT S   +   G++   NVK
Sbjct:    1 MEEKRRDAAPSAA--DSPASEPASSRRRAGGNKRKSAALNASGSSSAPSKRAARDKASPLHPPPLHN--GPLTRARQTPNSVAASSSAGASTPAAVKHSERTHLSAADSAALAEQLRKESEWETLEAAIEAEFEAIRSRGANAHVVPTHCGWFSWLYIHEIEKQMLPSFFNGKIENRTPDVYMEIRNWIMKKFHSNPNVQIELKDMSQLNVGDMEARQEVMEFLDYWGLINFHPFPSMDSAVVTAMED-DGDAEKSSLLEKLYHFETLQLCRP--VQRSSQMTPATASGLFPESTIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCSDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHVGTKTKAQCISYFVQMPIEDTFAEFED-NVDAGCKEPTDPVATNNDSSVGKDASECIENDTSDQDK-------TSKAEDVEVKASQEDNLKLQEGSDEKASEGTSKSEDAVKGKSDQEAGNECAINALKEAFAAVGYSPGPEGPSSFAEVGNPVMALATFLAHLVGTDVAVASAHSSIKSMSRNSPGTDLAARCCFLLEDPPDNKNEPTSSERDSKSEGDQNEVNVK 609          

HSP 2 Score: 176.022 bits (445), Expect = 3.766e-41
Identity = 84/142 (59.15%), Postives = 109/142 (76.76%), Query Frame = 1
Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            +QEEDQIRQLT+ LIEKQL K+E KL+FFN++E VV+R +E ++RSR +LYHER  IIA+RLG+PASSSR +P   + NR+ TN ANS+ RP M M   RP +SRP G++  T  NP  S+T AG+S+RP +Q+ LSSVGTK
Sbjct:  890 NQEEDQIRQLTSLLIEKQLLKLETKLAFFNDVENVVLRAREHVERSRHKLYHERALIIASRLGIPASSSRGVPATVSTNRIPTNIANSLPRPQMMMSPQRPLISRPAGTVATTLQNPLASSTAAGNSVRPSNQEKLSSVGTK 1031          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0A0K5Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G267920 PE=4 SV=1)

HSP 1 Score: 536.569 bits (1381), Expect = 1.271e-166
Identity = 355/755 (47.02%), Postives = 480/755 (63.58%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPS-SAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXX----XXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCS-RSVANDTG--NRGAQNVKHSEDESLKGDQKSSLSHHGDEN-TEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNE 2353
            ME+KRRD  N P+  + S   EP ++RRRAGA KRKA++L  S++ S PSKR TR+KS+     +     GP TRAR G  +   A   G    G+   +  L+   V+  D               A +EA     +EA++SR +N HVVPNHCGWFSW K H +EE  L +FF+GK+  R+PD+Y+EIRN IMKKFHANPS QIESKDL ++EVG+LDARQEV+EFL++WGLINFHPFP  DS    +  D +   +KDSL+E LFHFE +ES PSVVPK N +T + P   L ES + ++++R EGPSV+YHCNSCSADCSRKRYHCQK+ADFDLC++CFNN KF S MSSSDFILME     G SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED F    + N++   KET  P  + ++++V  +++E+ ++K T ++ +  +   + +   E +VG      E     DV+G    +K E  +   D  + +E+ AL A+REAFEA+GY LT E  LSFADVGNPVMALA F A LVG ++A+AS++ SLKS S   P+++LA R+CF+LEDPPD+K+   +  SV N     N   Q+ K SED S       +LS +   N +  S+ +E   + + +D   +    TN  ++       L E  ++   KD +  + + S  + S++  + +E +G   T ++P +   +  +V MSD    +++E
Sbjct:    1 MEDKRRDTANIPSNTTDSPSSEPPSSRRRAGAHKRKASALGASNTLSAPSKRVTRDKSALSHPPNHN---GPFTRARLGPNNVAGAASAGGLAPGSVKADGSLLHSEVQRGDALLSAAEELNKATRLANLEASFEVDYEAIKSRGANVHVVPNHCGWFSWTKVHPIEERTLSTFFSGKAANRSPDIYIEIRNWIMKKFHANPSTQIESKDLSELEVGELDARQEVMEFLEHWGLINFHPFPATDSI---STNDVNDENQKDSLVEKLFHFETLESCPSVVPKINATT-AAPPRLLRESTISEEIVRPEGPSVEYHCNSCSADCSRKRYHCQKRADFDLCSECFNNGKFDSDMSSSDFILMESAGVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLES-EGNVEVGGKETIAPPLIENDSSVPSDITESVDNKATGKEASSVENASSKEDTGEVKVGQDNPKLE-----DVEGKASLVKSESKD---DDEKVSEDIALNALREAFEAIGYVLTPEHSLSFADVGNPVMALAAFLARLVGSDVASASARFSLKSTSQKSPSLELATRHCFILEDPPDDKKAQDNLESVDNVEAQKNDKEQSAKQSEDNSTSILDDRALSTNNSNNKSGESVTKETTENGNSSDAIREHDPITNHGSDTSSNLKELGEKELL---KDEKTGIVKESENLESKLTSNPVETSGEGTTGEKPLESTMSSNDVHMSDLQHAERSE 736          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: F6HQL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02410 PE=4 SV=1)

HSP 1 Score: 537.339 bits (1383), Expect = 6.142e-165
Identity = 336/683 (49.19%), Postives = 442/683 (64.71%), Query Frame = 2
Query:  521 VRSRDSNAHVVPNH-----------CGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXD-QAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGA---QNVK-----------------HSEDESLKGDQKSSLSHHGDENTEVSLREENATSP-SPNDLTTDKKES---------------------TNFATNEED-KKANLNESSIINQS------KDHQPSVTRVSNTITSQ--VLPSTLEETGGKGTAKEPSQPPKAVKEVD-MSDSVQLKKNEPCDAAAS 2374
            +RSRD+N HVVP+             GWFSW K H +E   +PSFFNGKS  R PD+Y +IR+ I+K+FH NP+ QIE KDL ++E+GDLDARQEV+EFLDYWGLINFHPF P +S+V  A+GD D   + DS +E L+ F++++S P VVPKAN+S P+M SG  PESA +++L+R EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCT+CFNN+KFGS MSSSDFILMEP EA G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED F +C+D   + N +E A P + N++++V K++ E+TESKT   +    +  METSKPE    +    E S+ ++      + ET KPE  N  KD  E  E CAL A+REAFEAVG   T  + L+F D GNPVMALA F   LVG   A+A+  SSLKS+S   P +QLAAR+C++LEDPPD+ KE   S S   +  ++ A   +N+K                   EDE+ K + +  L+   +   +V+ REE++ S    +D   D+ E+                      + A  E D   +N +E  I++QS      KD  P+    S+ +T +  +LPS+++E+G   + K+ SQP +A K+VD + +S+ L+  EP  +  S
Sbjct:  149 IRSRDANVHVVPSSSGEIHLFTTLSTGWFSWTKVHPLEAQAMPSFFNGKSENRNPDMYKQIRDWIIKRFHGNPNTQIEVKDLSELEIGDLDARQEVMEFLDYWGLINFHPFLPAESSV--ANGDDDTAKQLDSSVEKLYRFDMVQSCPPVVPKANMSAPTMASGLFPESAFVEELVRSEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTECFNNQKFGSDMSSSDFILMEPAEAPGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFIDCED-ETNVNPQENADPVSANNDSSVPKDIPESTESKTDVSEGHPPSSAMETSKPEG-PPLSSPMETSKPESQPPPSPM-ETSKPEGGNEMKDNQETGEACALKALREAFEAVGSLPTPGAPLTFTDAGNPVMALAVFLTQLVGSGRASAAVHSSLKSMSSNSPGMQLAARHCYILEDPPDDKKEQVGSESATAEMVDQDAHKDENMKDVNEKDEKQKDVNQKDASQEDENQKHENQKELNQKEENQKDVNQREEHSISILEGSDTLKDQNENKIEDSVPEEKLSVPPNGECTEKSLAAKEPDVVVSNDSEPGILSQSSNSDLPKDCPPNSVDKSDDLTPKAGLLPSSMKESGDGASVKDHSQPSEAPKDVDTVPESLPLQTKEPLQSLTS 826          

HSP 2 Score: 200.29 bits (508), Expect = 7.763e-49
Identity = 124/186 (66.67%), Postives = 146/186 (78.49%), Query Frame = 1
Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            D+ +EGKS++HDS++ + + SIDK+KRAA +ALSAAAVKAKLLA+QEEDQI+Q  T LIEKQLHK+E KL+FFNEME V+ RV+EQ+DRSRQRLYHER QIIAARLG   SSSR   P    NR   +F  SV RPPM M + RPP+SRPM  M P+  N  VS+TVAGSSIRP SQD LSSVGTK
Sbjct:  839 DQTKEGKSESHDSSKTKPDPSIDKIKRAATSALSAAAVKAKLLANQEEDQIQQFATLLIEKQLHKLETKLAFFNEMESVITRVREQMDRSRQRLYHERAQIIAARLGFAGSSSRPTAPSLPINRPGMSFPTSVPRPPMGMTSQRPPMSRPM-MMAPSSLNTLVSSTVAGSSIRPPSQDKLSSVGTK 1023          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A022RC06_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a000855mg PE=4 SV=1)

HSP 1 Score: 535.028 bits (1377), Expect = 7.594e-165
Identity = 367/765 (47.97%), Postives = 466/765 (60.92%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPSS-AEL---EPATTRRRAGAQKRKA-------NXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSA--VVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNID---------TNSKETAGPAAMND-ETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEK----EPTCSRSVANDTGNRGAQNVKHSE--DES---------LKGDQ----KSSLSHHGDENTEVSLREEN-ATSPSPN--DLTTDKKESTNFATNEEDKKANLNESSIINQS---KDHQPSVTRVSNTITSQVLPSTLEETGG 2266
            ME+KRRD     + PSS AE    EP T+RRR G QKRK+            S+S  T SKR  REK   +       + GPLTRAR    + N    + +    A++ E      + KAE    +++ SE  EALEAKIEAE++A+ SRD+NAHVVP H GWFSW K H +EE +LPSFFNGKS  RTP++Y EIRN IMK+FH NP+ QIE K L ++ VGD+D RQEV+EFLDYWGLIN+HPFP  + A  +V AD + D I K DSL+E LF FE +ES   +VP+   + P+M SG LPES + D+L++ EGPSV+YHCNSCS DCSRKRYHCQKQADFDLC DCFNN KFGS MS SDFILMEP EA G+SGG WTDQETLLLLEA+E++K+NW+EIAEHVATKTKAQCILHF+QMPIED FFN  D N D         ++S E + P A +D +T +      T       ++Q  + PME SKP++ KE+ G                              GLE  ++ AL A+ EAFEAVGY  + E  LSFA  GNPVMALA F   LV PNIA AS +S LKSLS  C + QLAAR+CF LEDPP++     +P  + +V N+         KH+E  D++         L+ D+    K SL    DE T+ + +++   TSPS +  D +   KE     TNEE +  +  E S  N     KD + S+   S+T   ++ P T++E+ G
Sbjct:    1 MEDKRRDLAGIQSQPSSMAETPPSEPPTSRRRGGGQKRKSASINNSGGGGGSSTSQMTSSKRQAREKLPPVPFPPIHMN-GPLTRARVQPYNTNSLSEVSAVKSEAEIGEA-----AAKAE----MSRVSENWEALEAKIEAEYDAIVSRDANAHVVPIHAGWFSWTKIHPLEERMLPSFFNGKSESRTPEIYTEIRNWIMKRFHHNPNEQIELKHLNELTVGDMDVRQEVMEFLDYWGLINYHPFPRNEPAAMLVDADSNKDEIVKMDSLVEKLFQFESVESWTPIVPRMTTAIPAMSSGLLPESVIADELVKSEGPSVEYHCNSCSGDCSRKRYHCQKQADFDLCADCFNNGKFGSDMSPSDFILMEPAEAGGVSGGNWTDQETLLLLEAIEIFKDNWSEIAEHVATKTKAQCILHFVQMPIEDAFFNHGDENNDAPKENVVPVSDSTEISAPKADDDNDTPLKDVPDITENQGGATDNQDSSCPMEISKPDEVKELDG------------------------------GLEDGKSFALKALNEAFEAVGYLPSPEESLSFAKAGNPVMALAAFLVRLVEPNIANASVRSLLKSLSSNCSSEQLAARHCFPLEDPPEDMKDVVDPEGAATVTNEHEEVQKDKTKHAEKLDKTPDSVADGINLRDDENDRSKDSLIEENDEKTDTTSKDQKPVTSPSGDCADRSDTLKEPNGMVTNEETQPVSKTEPSSSNLEQVPKDGEESLVAASHT---ELQPDTVKESEG 722          

HSP 2 Score: 147.902 bits (372), Expect = 1.332e-32
Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = 1
Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANR-----VATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            DQEEDQI QL+TSL+EKQL+K+EAKL+FFN+ME VVMRVKEQLDRS+QRL+HER  IIA R G+ +SS+R    PNA N         N  N  +RP M M + RPP+SRPM +  P P N ++  +  GSS++P + D LSSV  K
Sbjct:  820 DQEEDQILQLSTSLVEKQLYKLEAKLAFFNDMENVVMRVKEQLDRSKQRLFHERAHIIATRFGM-SSSNR----PNAQNLPPNRPPINNVPNMASRPFMGMNSLRPPISRPMMTANPAP-NSFMPGSATGSSVQPNA-DKLSSVSMK 959          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 24
Match NameE-valueIdentityDescription
SWI3D_ARATH2.020e-14645.99SWI/SNF complex subunit SWI3D OS=Arabidopsis thali... [more]
SWI3C_ARATH1.383e-4238.60SWI/SNF complex subunit SWI3C OS=Arabidopsis thali... [more]
SSR2_SCHPO2.909e-2933.22SWI/SNF and RSC complexes subunit ssr2 OS=Schizosa... [more]
SWI3B_ARATH1.493e-2329.64SWI/SNF complex subunit SWI3B OS=Arabidopsis thali... [more]
SMRC1_HUMAN2.620e-2328.67SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN... [more]
SMRC1_MOUSE3.678e-2328.52SWI/SNF complex subunit SMARCC1 OS=Mus musculus GN... [more]
RSC8_YEAST1.224e-2230.58Chromatin structure-remodeling complex protein RSC... [more]
SMRC2_MOUSE3.174e-2229.41SWI/SNF complex subunit SMARCC2 OS=Mus musculus GN... [more]
SMRC2_HUMAN3.258e-2229.41SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN... [more]
SWI3A_ARATH1.473e-1927.96SWI/SNF complex subunit SWI3A OS=Arabidopsis thali... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
K7LT00_SOYBN4.179e-16849.50Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
V7AF01_PHAVU1.111e-16656.41Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A0A0K5Y5_CUCSA1.271e-16647.02Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
F6HQL6_VITVI6.142e-16549.19Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A022RC06_ERYGU7.594e-16547.97Uncharacterized protein OS=Erythranthe guttata GN=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..135
NoneNo IPR availablePANTHERPTHR12802:SF39SWI/SNF COMPLEX SUBUNIT SWI3Dcoord: 826..832
coord: 120..237
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 534..691
coord: 120..237
NoneNo IPR availablePANTHERPTHR12802:SF39SWI/SNF COMPLEX SUBUNIT SWI3Dcoord: 259..432
NoneNo IPR availablePANTHERPTHR12802:SF39SWI/SNF COMPLEX SUBUNIT SWI3Dcoord: 534..691
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 259..432
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 826..832
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 307..359
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 305..349
e-value: 2.9E-8
score: 43.5
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 308..343
e-value: 1.6E-8
score: 34.1
IPR000433Zinc finger, ZZ-typePROSITEPS01357ZF_ZZ_1coord: 311..337
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 305..351
score: 8.978
IPR001005SANT/Myb domainSMARTSM00717santcoord: 364..412
e-value: 1.5E-12
score: 57.7
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 366..409
e-value: 1.2E-11
score: 44.5
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 145..236
e-value: 1.2E-16
score: 59.8
IPR007526SWIRM domainPFAMPF04433SWIRMcoord: 147..232
e-value: 2.6E-18
score: 66.0
IPR007526SWIRM domainPROSITEPS50934SWIRMcoord: 144..241
score: 19.408
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 362..406
e-value: 2.3E-8
score: 33.2
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 363..416
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 151..233
IPR017884SANT domainPROSITEPS51293SANTcoord: 363..414
score: 22.659

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092725 ID=g.barbadense_cottongen_reftransV1_0092725; Name=g.barbadense_cottongen_reftransV1_0092725; organism=Gossypium barbadense; type=contig; length=4555bp
AATCAATTACCTTAGCCTGGCGATAGCAAAATCACAGCAACAAATTTCAC
ACTGACAGACTCAAAGTTCATTTTTTTTTTTGCCTTCTGGAAAACCAATC
TCCTGACCCGTGGTGATGGAGGAGAAACGCCGGGACGCGGGGAACTCACC
GGCTGGACCGAGCTCAGCCGAGCTGGAGCCGGCAACAACTCGCCGTCGAG
CTGGAGCACAAAAGAGGAAAGCTAATTCTCTTTCCGGGTCCAGCTCATCA
TCGACGCCGTCGAAACGGGCTACACGGGAGAAGTCATCTAACTTGATCTC
CCACTCTTCGATCAACCATAACGGTCCTTTAACTAGGGCTCGCCAAGGAG
CGCCTAGTGGAAACCTAGCCTTGGGTTTGGGCTCGGGATTCGGTGGCGCG
AAGCTTGAGGAGAGGATTTTGGTTAAAGAGAGTGTGAAGGCTGAAGATTT
GGAGGAATTGAATAAGGCAAGTGAAGAGTTGGAGGCTTTGGAAGCTAAGA
TTGAAGCTGAGTTTGAAGCTGTTAGGTCTCGTGACAGTAATGCGCACGTG
GTTCCTAATCATTGCGGATGGTTTTCATGGAAAAAAGCTCACCATGTGGA
GGAATGTATATTACCTTCATTCTTTAATGGGAAATCCCCAGTGCGTACCC
CTGATGTGTACTTGGAGATACGTAATAGCATTATGAAGAAATTTCATGCA
AATCCGAGTGTACAAATTGAGTCTAAAGATCTGCCAGATATTGAAGTTGG
CGACTTGGATGCAAGGCAGGAAGTACTGGAGTTCTTGGACTACTGGGGTT
TGATTAACTTTCATCCATTCCCTCCAGGTGATTCTGCCGTGGTCAGCGCT
GATGGTGATTGTGACGGGATAGCGAAAAAGGATTCTTTGCTTGAAAATTT
GTTTCATTTTGAGGTGATTGAATCGCGCCCATCAGTTGTTCCCAAAGCTA
ACCTTTCAACTCCATCCATGCCATCTGGGTTTCTTCCTGAATCTGCAGTT
CTTGATGATTTGTTGAGACTTGAGGGACCATCTGTTGATTACCATTGCAA
CTCTTGTTCAGCTGATTGCTCTCGGAAGCGCTACCATTGCCAGAAGCAGG
CAGATTTTGACTTATGTACTGATTGCTTTAACAACCGGAAGTTTGGCTCT
GGCATGTCTTCTTCTGATTTTATTCTCATGGAGCCTGGTGAGGCCTCTGG
CCTTAGCGGCGGGAAGTGGACAGATCAGGAAACTCTCCTTCTTCTCGAGG
CACTAGAACTTTATAAAGAAAACTGGAATGAGATTGCAGAGCATGTTGCG
ACAAAAACCAAAGCTCAATGCATACTGCACTTTCTTCAAATGCCAATTGA
GGATGTATTTTTTAATTGTGATGATAATAACATAGACACGAATTCAAAAG
AAACTGCTGGCCCAGCTGCCATGAATGATGAAACAACTGTCGCTAAAGAA
GTCTCGGAAACAACAGAGAGTAAGACTACTCAAGAAGATCAGGCCAAGAC
TAAGCCGATGGAAACTTCAAAACCTGAAGATGAAAAAGAAGTCGGGGGTA
GTGAGGAACCATCAGAAACCAAAACTGGAACTGATGTAAAAGGTGTTAAA
GAAACATTAAAGCCAGAAGATATGAATGTACCAAAAGATGGACTAGAAGC
AACTGAAAATTGTGCCCTTACAGCAATAAGGGAGGCATTTGAAGCTGTCG
GTTATAATTTAACATCCGAAAGCAAACTTTCATTTGCTGATGTAGGAAAT
CCTGTCATGGCATTGGCAGGATTCTTTGCACATCTGGTTGGACCCAACAT
TGCTGCTGCTTCATCCCAGAGTTCACTTAAATCATTATCTGGTACTTGTC
CGAACATTCAACTGGCTGCCAGGAACTGCTTTGTTTTGGAAGATCCACCA
GATGAGAAGGAACCAACATGTTCTAGGAGTGTTGCCAATGATACGGGTAA
TCGGGGTGCTCAGAATGTGAAACACTCGGAAGACGAAAGCCTCAAGGGGG
ATCAGAAAAGTTCATTGAGCCACCATGGTGACGAAAACACTGAAGTCTCT
CTTCGTGAAGAGAATGCGACATCGCCTTCACCCAATGACCTAACCACGGA
TAAAAAAGAGTCAACCAATTTTGCCACTAATGAGGAAGATAAAAAAGCTA
ATTTGAATGAATCCAGCATTATTAATCAATCAAAGGATCATCAACCAAGT
GTAACAAGGGTATCAAATACCATAACATCCCAGGTTCTACCAAGTACTCT
AGAGGAGACAGGTGGGAAGGGAACAGCTAAAGAACCTTCTCAGCCTCCAA
AAGCAGTGAAGGAAGTAGATATGTCTGATTCTGTTCAACTGAAAAAGAAT
GAGCCTTGTGATGCCGCTGCATCAAAGCCAGTGGGAGAGCTATCTGAACC
AGCAGATGCATCAGAAAATCTAGAGACAGCTTCCTGCTCTCCATCCAGAT
CAAAGAATGAGCAAAAAACTGTTAAACCAATCCCTGATGGGGAATCTACG
GAGCCTGCAGATGCATCAGATGATGTTCAACTGGTGTCTGTTTCACAACC
ATCTGAAAGGAGTGAACCTCCACAGCCAGTCACATCGAATTCAGTAAATG
AAAATGGAGTAACGACAGGTTTCTCTCTTTTCTTCTATAAATATCTTGTT
AGAAAGTGGAAGCCGCATTAACAGAATCTAACTCTACTGCAAAATGCTTA
GCAATATCTTATGGGAATATGTAGGGATAGATAGCGTCTGATTTAAAATA
TACAAAGAAGGCTAAAAGGAACAGTTGGTTCTATAAGGTTGAGCGTTTGC
TATCTTTATTGGTTTTACATAGAGCAGCTAGGAAAATTGAAACTTGATAC
ATAATGTTGTTTCTACTAGGTTCTGTAGAGGTATGTATTCCAAGAACCAC
CTGCTGGCAAAATGCATAGATCAATTTTGGGTGTATCTTATTGTTCTTTG
CAGACAAGATCGAAGAAGGTAAAAGCAAGAACCATGACTCTACAGAGAGA
GAAGATAATAGTAGCATTGATAAATTAAAGAGAGCTGCAGTTACAGCACT
CTCAGCAGCAGCAGTGAAGGCAAAACTTCTAGCAGACCAGGAAGAGGACC
AAATCCGACAACTTACCACATCATTAATAGAAAAGCAGTTACATAAGATG
GAAGCCAAATTATCTTTCTTCAATGAGATGGAGGGAGTCGTAATGAGGGT
GAAGGAGCAATTGGACAGGTCAAGGCAAAGGCTTTACCATGAGCGAACGC
AGATAATTGCTGCTCGACTGGGCTTACCAGCTTCCTCCTCTAGAGCAATG
CCACCACCAAATGCTGCAAATAGAGTTGCAACAAACTTTGCAAACTCGGT
TGCAAGGCCTCCAATGAGCATGAAAGCCCCAAGACCACCATTGTCGAGAC
CCATGGGTTCTATGACCCCTACCCCTTCCAACCCATATGTATCCAATACA
GTTGCAGGGAGTTCAATTCGACCTGGTAGCCAAGACAATCTTTCCTCCGT
TGGAACCAAGTAGTCTCTATTCATATTACTTGTGAATAGAATTTTTCAAT
CCATTCTTATACAAGGGTCATCCATCTTGAGATGCATCTGGTTAGTACCC
CCTTTTTTTATTGTTGCAGTTTCTGTTCTTAACGCTGCCAGTCATCTTGG
GTGCATTTAAGAACTTGAGAATATACTCAAGCTGAACTCATGGCATATTC
ATATCTGATGTTTTCTGCTAATTCCAGCCACACCACTGATTTATCTCCGG
ATACTGCGGCCTATATTACATAATTGACTGGCATCACATCATCATAGGAG
GAAGGAGTAGATGGTTATTGTTCTCCCTTCAATCCTAATCTAGTCAACAA
CAGTCTATAGCCTTTGTCTAACTTGGAATTTTCTTGAATGCTTTTGGGTT
TTTGTAAGTCTAGTTTGTAGTTGATATTTTGAGACCTCAAATGATGAATT
TAGGTACTGCAAAGTTAAACATCCGTAACCATACCAAATTCTTAGGTCAT
CTTTAAGGTCAGATATAACCAATGTATTCTATATTTATGGATGAACAGAT
GTGTTTTTGTTGTTACAAAATGGCGTAAATCTCTTGGTTTGAAGCTCCCT
TTTCTCACCTGTAATGGCTTCCTTTAGTGTCATATATCCGACTACCCAAA
TTGCATTATATGCCTCTCGAGAACACCACACAGCACAGGCAGGAAAGTTA
GATCAGCTGAAATCAGGCTGCAAAATAACTTCTAAAAATGGGTTAACTTT
TAAATATTATAACAATTAAGTCCCTTAAGTCTGACACGTTTCAAACCTAA
CGAAAGCAACAGGGGGCCAACATTATTGGTGGAATAAACAATCACTCCTA
ATCCATACAAGAAGAAGAAGAAAAAACTAGCAAGATAATCATCTTAATAA
TGAATTACAGTCACATTATACTCAACAATGGCGTCGCCAGTCTTGAAATT
TACGGTATAAGTCTTGAGTTGTGCATACCCTTTCGCCATCCTGAACTTCC
CTTTCCCTCCGACCACCGCAAGCTCACGCTCCGATTCGGTAATTGGATTC
CTCGA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ
IPR001005SANT/Myb
IPR011991ArsR-like_HTH
IPR007526SWIRM
IPR009057Homeobox-like_sf
IPR017884SANT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO:0003677DNA binding