g.barbadense_cottongen_reftransV1_0092725, g.barbadense_cottongen_reftransV1_0092725 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092725
Unique Nameg.barbadense_cottongen_reftransV1_0092725
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length4555
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3D_ARATH (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=3)

HSP 1 Score: 480.715 bits (1236), Expect = 2.020e-146
Identity = 367/798 (45.99%), Postives = 485/798 (60.78%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPSSAELEPATT-----RRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSE----TKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPD-EKEPTCSRSVANDT-GNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSI-----INQSKDHQPSVTRVSNTITSQVLPST-------LEETGGKG-----------------TAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGE 2389
            MEEKRRD+  + A   S+   PA+      RRR G  KRKAN+L GS+  S+   +    +   +++  S  HNGPLTRARQ       A          ++    +  +  K ++ EE NKA  E EALEAKIEA+FEA+RSRDSN HVVPNHCGWFSW+K H +EE  LPSFFNGK   RT +VY EIRN IM KFH+NP++QIE KDL ++EVGD +A+QEV+EFLDYWGLINFHPFPP D+   ++D D   +  K+SLL +L+ F+V E+ P +V K   +  + PSG  P+    D+LL+ EGP+V+YHCNSCSADCSRKRYHC KQADFDLCT+CFN+ KF S MSSSDFILMEP EA G+  GKWTDQETLLLLEALE++KENWNEIAEHVATKTKAQC+LHFLQMPIED F +  D   D  SK+T   A   D+ +V K+  E  E+K   ++    K  E  +PED  E   S+E S+    ++   +++  ++T K E     +   EA EN AL A+ EAFE VG++ T E+  SFAD+GNPVM LA F   L G ++A AS+++S+KSL      + LA R+C++LEDPPD +K+PT S+S + D  GN         +D S K DQ    S   +   EVSL  ++   P      TD  + T  + +EE +  +  E+S      + + +  +P  T  S      + PS        L+E    G                 +A + SQ P+A ++V+M D++Q +K+ P D    K VGE
Sbjct:    1 MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLTREKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKS----EVLNVAVGADGEKPKEEEERNKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHD--DLGDKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYK-DPISKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMK--EVPEPEDGNEEKVSQESSKPGDASEETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNS-GMLLATRHCYILEDPPDNKKDPTKSKSCSADAEGN---------DDNSHKDDQPEEKSKKAE---EVSLNSDDREMPD-----TDTGKETQDSVSEEKQPGSRTENSTTKLDAVQEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQSTVSQSAADASQ-PEASRDVEMKDTLQSEKD-PEDVV--KTVGE 767          

HSP 2 Score: 140.969 bits (354), Expect = 2.764e-32
Identity = 86/140 (61.43%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 3088 QEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPAS-SSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSI-RPGSQDNLSSV 3501
            QEEDQIRQL+ SLIEKQLHK+EAKLS FNE E + MRV+EQL+RSRQRLYHER QIIAARLG+P S SS+A  P    NR+A NFAN   RPPM M  PR     P     P P +   + T+ GSS   PGS DN+SSV
Sbjct:  852 QEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQRLYHERAQIIAARLGVPPSMSSKASLP---TNRIAANFANVAQRPPMGMAFPR--PPMPRPPGFPVPGSFVAATTMTGSSDPSPGS-DNVSSV 985          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3C_ARATH (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.383e-42
Identity = 110/285 (38.60%), Postives = 161/285 (56.49%), Query Frame = 2
Query:  542 AHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVG-DLDARQEVLEFLDYWGLINF------HPFPPGDSAVVSAD--GDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASG-LSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFN 1366
             HV+P H  WF+      +E  ++P FF+GKSP  TP+ Y+E RN+I+ K+  NP   +   D   +  G D++    V  FLD+WG+IN+      HP P  D + V  D  G+ +  +   + +++L  F+    +P+   K      S+PS    +S  LD  +R+     D HCN CS       +  QK+ D  LC DCF++ +F  G S  DF+ ++P +  G   G  WTDQETLLLLEA+ELY ENW +IA+HV +K+KAQCILHFL++P+ED   +
Sbjct:  175 VHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSIDSLIKFD----KPNCRHKGGEVYSSLPS-LDGDSPDLD--IRIREHLCDSHCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLD 452          

HSP 2 Score: 60.4622 bits (145), Expect = 1.352e-7
Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSS 3291
            D EE +I++L+ +++  QL +ME KL  F E+E ++M+  EQ++++RQR   ER ++++AR G P   S
Sbjct:  599 DHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAERARMLSARFGSPGGIS 667          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SSR2_SCHPO (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 2.909e-29
Identity = 95/286 (33.22%), Postives = 145/286 (50.70%), Query Frame = 2
Query:  548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSA--VVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEG-------------PSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVF 1360
            +VP++ GWF   K H +E    P FFNGKSP++TP +Y + R+ ++  +   P+  +         VGD+ A   V  FL+ WGLIN+   P    A  +    G    I+    + +     E++   P   P     + S     L E      L  +E              P VD  C +C  +CS+  YH  K   +D+C +C+   +F S  +SSDF+ M+  + +      W++QETLLLLEA+E Y ++WN+IA HV ++TK QC++HFLQ+PIED +
Sbjct:   19 IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVTACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPPISGHVQAISNTPIVTQ-----EMLAQHPP--PSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVDKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPY 297          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3B_ARATH (SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.493e-23
Identity = 83/280 (29.64%), Postives = 131/280 (46.79%), Query Frame = 2
Query:  539 NAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDN 1378
            N HV P++  WFSW   +  E   LP FF+ +S  + P  YL +RNSI+K++  +   +I   D+    V D+ + + V +FLD WGLIN++                       S       +E  E+  S    A     S P+  + E+A               +CN C A CS   + C K  D  LC  C+    +  G++SS+F  +E  E    S  +W+D+E LLLLEA+  Y ++W ++A HV  +T+  C+  F+++P  + F    D+
Sbjct:   47 NIHV-PSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSIRRVFDFLDSWGLINYNS----------------------SASAKPLKWEEKEAGKSAGDAA-----SEPATTVKETA-------------KRNCNGCKAICSIACFACDKY-DLTLCARCYVRSNYRVGINSSEFKRVEISEE---SKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDS 281          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC1_HUMAN (SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 2.620e-23
Identity = 82/286 (28.67%), Postives = 136/286 (47.55%), Query Frame = 2
Query:  527 SRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNI 1384
            +  +N  ++P++  WF +   H +E   LP FFNGK+  +TP++YL  RN ++  +  NP   + S        GD+ A   V  FL+ WGL+N+   P      +                    HF V+   PS +   +L +P +P+       +L+   + +   VD                     +F L TD ++ +       +S             +G +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED +    D ++
Sbjct:  443 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTP--------------HFNVLADTPSGLVPLHLRSPQVPAA----QQMLNFPEKNKEKPVDLQ-------------------NFGLRTDIYSKKTLAKSKGAS-------------AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASL 678          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC1_MOUSE (SWI/SNF complex subunit SMARCC1 OS=Mus musculus GN=Smarcc1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.678e-23
Identity = 85/298 (28.52%), Postives = 139/298 (46.64%), Query Frame = 2
Query:  527 SRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAA 1420
            +  +N  ++P++  WF +   H +E   LP FFNGK+  +TP++YL  RN ++  +  NP   + S        GD+ A   V  FL+ WGL+N+   P      +                    HF V+   PS +   +L +P +P+       +L+   + +   +D                     +F L TD ++ +       +S             +G +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED +          NS  + GP A
Sbjct:  442 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTP--------------HFNVLADTPSGLVPLHLRSPQVPAA----QQMLNFPEKNKEKPIDLQ-------------------NFGLRTDIYSKKTLAKSKGAS-------------AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE--------NSDASLGPLA 681          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: RSC8_YEAST (Chromatin structure-remodeling complex protein RSC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSC8 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.224e-22
Identity = 89/291 (30.58%), Postives = 136/291 (46.74%), Query Frame = 2
Query:  548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVV--SADGDCDGI-----AKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLD---DLLRLEGPSVD-------YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQ-CILHFLQMPIEDVFF 1363
            ++P+   WF   K H +E+   P FFN  S  +TP  Y + RN I+  +  +P   +    +      D+ +  ++  FL+ WGLIN+   P    +++  S  G    +       K  L EN+   EV E      P+        P     +  V D   D   L+  S +       Y C++C  +    RYH  +  D +LC+ CF    FG+   SSDFI +   E +G S  K W+DQE LLLLE +E+Y++ W +IA+HV    + + CI  FL +PIED + 
Sbjct:   81 IIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTITAVRRNVAMDVASIVKIHAFLEKWGLINYQIDPRTKPSLIGPSFTGHFQVVLDTPQGLKPFLPENVIKQEV-EGGDGAEPQVK---KEFPVNLTIKKNVYDSAQDFNALQDESRNSRQIHKVYICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRL---ENNGNSVKKNWSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYI 364          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC2_MOUSE (SWI/SNF complex subunit SMARCC2 OS=Mus musculus GN=Smarcc2 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.174e-22
Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 2
Query:  548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFF 1363
            ++P++  WF +   H +E   LP FFNGK+  +TP++YL  RN ++  +  NP   + S        GD+ A   V  FL+ WGLIN+          V A+     +    +      HF V+                 PSG +P        L+ + P              + +       +F L TD +  +   S             +A+  +  +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + 
Sbjct:  425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ---------VDAESRPTPMGPPPT-----SHFHVLA--------------DTPSGLVP--------LQPKPPQQSSASQQMLNFPEKGKEKPADMQNFGLRTDMYTKKNVPSK-----------SKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL 649          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC2_HUMAN (SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.258e-22
Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 2
Query:  548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFF 1363
            ++P++  WF +   H +E   LP FFNGK+  +TP++YL  RN ++  +  NP   + S        GD+ A   V  FL+ WGLIN+          V A+     +    +      HF V+                 PSG +P        L+ + P              + +       +F L TD +  +   S             +A+  +  +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + 
Sbjct:  425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ---------VDAESRPTPMGPPPT-----SHFHVLA--------------DTPSGLVP--------LQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSK-----------SKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL 649          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3A_ARATH (SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana GN=SWI3A PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.473e-19
Identity = 78/279 (27.96%), Postives = 122/279 (43.73%), Query Frame = 2
Query:  545 HVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSAD------GDCDGI---AKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFL--PESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPI 1348
            + +P    WF W   H +E      FF   S  RTP VY E R+ I+ KF  +   ++    +    VGD++  Q+V  FL+ WGLINF      +  ++S D      G   GI   A  +SL            RP   P   L    + +G    P ++  D    L+ P     C  C   C    Y   K    ++C  CF N  +G   ++ DF L+        +   WT++E LLLLE++  + ++W  I++ V+TK++  CI   +++P 
Sbjct:   13 YTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIEQGTPAGIRVTATPNSL------------RPITAPP--LVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCGERCDSPFYQHNK-GIVNICEKCFKNGNYGENNTADDFKLI-----GNSAAAVWTEEEILLLLESVLKHGDDWELISQSVSTKSRLDCISKLIELPF 271          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: M5VJC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000770mg PE=4 SV=1)

HSP 1 Score: 640.188 bits (1650), Expect = 0.000e+0
Identity = 442/841 (52.56%), Postives = 567/841 (67.42%), Query Frame = 2
Query:  116 MEEKRRDAGNS--PAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQ-AKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENAT--SPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQP-SVTRVSNT-ITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVT 2614
            MEEKRRDA  +  P+   S   EP++ RRR GAQKRKA+SL GS+SSSTPSKR TREK+            GPLTRARQG  S   A   G+       +    V E+V      EL K   ELEALEA +EAEFEA+RSR++NAHVVP+HCGWFSW K H +EE +LPSFFNGKS  RTPD YLEIRN IMK FHANP V IE KDL ++EVGD DARQEV+EFLD+WGLINF P PP  SAV SA+GD  G+A+KDSL++ L+HFE ++SR SVVPK N++TP++PSG  PESA+ ++L+R EGP+V+YHCNSCSADCSRKRYHCQKQADFDLCTDCF+N KF SGMSSSDFILMEP EA G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED F + +D +ID ++KETA P + ++E+   K+  ETTE+KT   +   +T P+ETSK   E  VG  ++ S+ +   +VK  +ET K ED    K   E  E+ AL A++EAFE VGY  TSE +LSFA+VGNP MALA F A LVGP++A AS+ +SLKS+S + P  +LAAR+CF+LEDPP D KE     SV  +      Q     ED+S K D  +S    G E+ ++S  + +     PSP + +   +E     ++EE +  NLN+S  +   KD  P +V ++ ++ + ++  PS+ +E+G   +  +PS+P    K+VDM DS+   K++P     S  V E     +AS++L+ ++   S+    Q+ V    + E   P + S DV +VS  QP E+ +  QPV SNS+ E G +
Sbjct:    1 MEEKRRDAAGAQPPSNAESPAAEPSSARRRGGAQKRKASSLGGSTSSSTPSKRFTREKAMLSHPPIHN---GPLTRARQGPSSLGSASASGAAVKPTVAKRPDPVGEAV-----AELVKRESELEALEASMEAEFEAIRSRNANAHVVPSHCGWFSWTKVHPIEEQMLPSFFNGKSETRTPDAYLEIRNCIMKIFHANPGVFIELKDLLELEVGDFDARQEVMEFLDHWGLINFDPSPPTGSAVASAEGD--GLAEKDSLVDKLYHFEALQSRSSVVPKTNITTPTVPSGLFPESAIAEELVRPEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNGKFDSGMSSSDFILMEPAEAPGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFLDYED-DIDASAKETADPTSTDNESLAPKDAPETTENKTGASESDPQTSPVETSKEVTEVNVG--QDTSKPEDVNEVKVGEETSKLEDTGELKVDQETDESFALNALKEAFEVVGYPPTSEGQLSFAEVGNPAMALAAFLARLVGPDVAIASAHNSLKSISASSPGTELAARHCFLLEDPPSDNKEQAGPDSVVAEVLKDKVQEDIVDEDKSQKEDNATS----GLEDKDLSNDKGDNILEKPSPEEKSQSAEEQDGIVSHEEVEADNLNKSDNLELPKDQSPTTVGKLDDSKLEAENPPSSEKESGEGISVGKPSEPTDTPKDVDMCDSLPSTKDKPQQPVTSNSVEEPPRSTEASKDLDVSNSLASQMNEPQQPVTAKSE-EPPRPTEESKDVDMVSDPQPQEQDDSQQPVASNSMVETGAS 823          

HSP 2 Score: 198.364 bits (503), Expect = 3.316e-48
Identity = 127/186 (68.28%), Postives = 148/186 (79.57%), Query Frame = 1
Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            D+  +GKS+ HD+ E + +  IDKLK AAV+ +SAAAVKAKLLA+QEEDQIRQL   LIEKQLHK+EAKL FF+EME VVMRV+EQLDRSRQ+LYHER QIIAARLGLP SSSR MP    ANR+A N ANSV RPP++M + RPP+SRPMG   PT SN +    +AGSSIRP SQD LSSVG+K
Sbjct:  825 DQTNDGKSEKHDTIETKVDQKIDKLKHAAVSTISAAAVKAKLLAEQEEDQIRQLAAMLIEKQLHKLEAKLGFFSEMENVVMRVREQLDRSRQKLYHERAQIIAARLGLPGSSSRPMPSSMPANRMAMNVANSVPRPPLNMTSLRPPMSRPMGPTAPT-SNQFSPTALAGSSIRPPSQDKLSSVGSK 1009          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: B9HRP3_POPTR (DNA-binding family protein OS=Populus trichocarpa GN=POPTR_0009s11780g PE=4 SV=1)

HSP 1 Score: 630.172 bits (1624), Expect = 0.000e+0
Identity = 427/826 (51.69%), Postives = 532/826 (64.41%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERI-----LVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXX-XXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLS------HHGDENTEVSLREENATSPSPNDLTTDKKESTNFA----TNEEDKKANLNESSIINQSKDHQPSVTRVSNTI--TSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDM-SDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533
            MEEK   AG+    P+SAE  P  +RRR G  KRKANSLS   SS  PSKR TREK++     +     GP TRARQ       +          K+   +     LV+E  +++           +E L+ +IEAEFE +RSRDSNAH+VP+HCGWFSW K H +EE +LPSFFNGKS  RTPD YLEIRN IMKKF++NP+  IE KDL ++EV DLDARQEVLEFLDYWGLINFHP    DSA    + D D  AKKDS LE LF FE I+  PS+VPK NL+ P+  S   PESA+ ++L +LEGPSV+YHCNSCSADCSRKRYHCQKQAD+DLC DCFNN KFGS MSSSDFILMEP EA+G SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED FF+   N+++  SK T    A  DET+  K+V +T+ESKT   EDQ  T PME SKPED  EV GS+E +E +  ++V    E  K ED +  K   E  EN AL A+ EAFEAVGY+ T E++LSF++VGNPVMALA F A LVGPN+A AS++SSLKSLS   P +QLAAR+CF+LEDPP+E K+P+ S  VA +  +  AQ  K  E    +    S L        H D+    S+ EE     +    + +K  + N A    ++EE +     ESS     KDH PS+ + S+ I   S   PS+ +ET    +A+E SQ  +  K+VDM SD    +KNEP  + AS  V E S+  DAS++++  S S    K+  +       G+ ++P +++ DV +
Sbjct:    1 MEEK--PAGSYADSPASAE--PGPSRRRPGGHKRKANSLSNFFSSPLPSKRLTREKAAISNLSNHN---GPFTRARQIPNILASSALSAGVKVEQKVATAVPDAAALVEEERRSK-----------VEELQTEIEAEFEVIRSRDSNAHIVPSHCGWFSWTKIHPLEERLLPSFFNGKSQSRTPDTYLEIRNWIMKKFNSNPNTLIEVKDLSELEVSDLDARQEVLEFLDYWGLINFHPLQ-FDSA---PNADGDEAAKKDSSLEKLFCFEAIQPCPSIVPKPNLAAPTTSSRLFPESAIAEELAKLEGPSVEYHCNSCSADCSRKRYHCQKQADYDLCADCFNNGKFGSNMSSSDFILMEPAEAAGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDAFFDV-TNDMNGTSKVTVDADATVDETSGPKDVLDTSESKTGASEDQPLTPPMEASKPEDTSEVKGSQESTENEKSSEVINGPEISKSEDASGVKVSEEMGENVALRALTEAFEAVGYSPTPENRLSFSEVGNPVMALASFLARLVGPNVATASARSSLKSLSSNYPGMQLAARHCFLLEDPPEERKKPSGSDCVATEMADHDAQKDKQEEKNQKENSPTSGLGDRDLSDDHRDKKVGDSVPEEKKPLDTSKGDSPEKVNAVNEAETAVSHEEVEPCRSKESSNSELPKDHTPSIVKESDGIPPKSACPPSSFKETLEVSSAEEHSQLTEVAKDVDMVSDLKSSEKNEPSQSVASMSVDEHSQAGDASKDVDMVSDSLPADKDGSQQPAKSNAGDHSQPTESTADVDM 803          

HSP 2 Score: 206.838 bits (525), Expect = 5.796e-51
Identity = 127/187 (67.91%), Postives = 149/187 (79.68%), Query Frame = 1
Query: 2962 EEG----KSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            EEG    K +  DS   +D++ IDK+KRAAV+ALSAAAVKAKLLA+QEEDQIRQL  SLIEKQLHK+E KL+FFNEM+ V+MRV+EQLDRSRQRLY ER QIIA+RLGLP  SSRA+PP   ANR+A NFAN+  RPPMSM A RPP+SRPMG++ PTP     + T AG+SIRP  Q+ LSSVGTK
Sbjct:  825 EEGPKDSKKEKLDSEVIKDDNKIDKIKRAAVSALSAAAVKAKLLANQEEDQIRQLAASLIEKQLHKLEMKLAFFNEMDSVIMRVREQLDRSRQRLYQERAQIIASRLGLPP-SSRAVPPSLPANRIAMNFANAFPRPPMSMTAQRPPISRPMGALAPTPDTLVSTTTTAGNSIRPSGQEKLSSVGTK 1010          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: B9H0P7_POPTR (DNA-binding family protein OS=Populus trichocarpa GN=POPTR_0004s16070g PE=4 SV=1)

HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0
Identity = 419/826 (50.73%), Postives = 523/826 (63.32%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGP---SSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETA-GPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTN----FATNEEDKKANLNESSIINQSKDHQPSVTRVSNTI--TSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQ-LKKNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533
            MEEK       PAG    S A  EPAT+RRRAG  KRKA+  +  SS  +  KR TREK+            GPLTRARQ       +          K+E++  V  +V         +    +E L+A+IEAEFE +RSRDSNAHVVP+HCGWFSW + H +EE +LPSFFNGKS  RTPD YL+IRN IMKKFHANP++ IE KDL ++EV D +ARQEVLEFLDYWGLINFHP      +V +ADGD  G AKKD  LE LF FE I++ P VV K N + P+ PS   PESA+ ++L +LEGPSV+YHCNSCSADCSRKRYHCQK+AD+DLC DCFNNRKFGS MSSSDFILMEP EA+G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED FF+C  N++D  SKETA   A + D +        +       EDQ  T PME SKPED   V       +   G DV   +ET K ED++  K G E  EN AL A+ EAFEAVGY+ T E++LSF++VGNPVMA+A F A LVGP++A AS+ S+LKSLS   P +QLA+R+CF+LEDPPDE K+P+CS  VA +  ++ A   K  E +S KG       D K     + D+  E S+ EE     S      DK +  N      T+EE +     ESS     KDH PSV + S+ I   S   PS+ +E     +A+E SQ  +  K+VDM  +++  +KN    + AS  V E S+  D S++++  S S P+ +   Q+ VK    GE ++  +A+ DV +
Sbjct:    1 MEEK-------PAGSFADSPASFEPATSRRRAGGHKRKASLSNSLSSPLSS-KRLTREKAGFSNLSIHN---GPLTRARQIPYILASSAPSAGV----KIEQK--VVAAVPDAAAVVEEERRSRVEELQAEIEAEFEVIRSRDSNAHVVPSHCGWFSWTQIHSLEERLLPSFFNGKSQSRTPDTYLDIRNWIMKKFHANPNILIELKDLSELEVSDSEARQEVLEFLDYWGLINFHPL--QLDSVTNADGD--GAAKKDLSLEKLFRFEAIQTCPPVVTKPNFTAPTTPSRLFPESAIAEELAKLEGPSVEYHCNSCSADCSRKRYHCQKEADYDLCADCFNNRKFGSNMSSSDFILMEPAEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDAFFDC-ANDMDGTSKETADADATIEDTSAPKDVHDTSESKTGADEDQHLTVPMEASKPEDTSGV-------KVCQGGDVINGQETSKSEDVSGVKAGEEIGENVALRALTEAFEAVGYSPTPENRLSFSEVGNPVMAVASFLARLVGPDVATASACSALKSLSSNSPGMQLASRHCFLLEDPPDERKKPSCSDCVATEMADQDALKDKQ-EGKSQKGNSPTSGIDNKDLSDDYSDKKVEDSIPEEKKPLDSSKGEFPDKVDVVNGGEMVVTHEEVEPGRSKESSNSELPKDHTPSVVKESDEIPPKSGCPPSSGKEPLEVTSAEEHSQLTEVAKDVDMVSNLKPPEKNGHSQSFASMSVDEPSQAVDVSKDVDMVSDSLPADNNGSQQPVKSNATGEQSQTTEATADVDM 796          

HSP 2 Score: 196.823 bits (499), Expect = 9.153e-48
Identity = 123/189 (65.08%), Postives = 152/189 (80.42%), Query Frame = 1
Query: 2950 ADKI-EEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTV-AGSSIRPGSQDNLSSVGTK 3510
            AD++ ++ K +  DS   +D+++IDKLKRAAV+ALSAAAVKAKLLA+QEEDQIR+L  SLIEKQLHK+E KL+FFNEM+ V+MRV+EQLDRSRQRLY ER QIIAARLGLP  SSRAMP    +NR+A NFAN+  RPPM+M   RPP+S PMG++  TP   +VS T  AG+SIRP SQ+ +SS+GTK
Sbjct:  818 ADEVPKDSKKEKPDSEVIKDDNNIDKLKRAAVSALSAAAVKAKLLANQEEDQIRELAASLIEKQLHKLETKLAFFNEMDSVIMRVREQLDRSRQRLYQERAQIIAARLGLPP-SSRAMPQSLPSNRIAMNFANTFPRPPMNMATQRPPISTPMGTLANTPPGTFVSTTTAAGNSIRPSSQEKISSIGTK 1005          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A067K099_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18808 PE=4 SV=1)

HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0
Identity = 443/916 (48.36%), Postives = 557/916 (60.81%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQ----------------------------------------------KQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAG-PAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMAL--------------------------AGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQK--SSLS-HHGDENTEVSLREENATSPSPNDLTTDKKESTN---FATNEEDKKANLNESSIINQSKDHQPSVTRVSNTI--TSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDM-SDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKT-VKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVT 2614
            MEEK   +  +    S A  EPA++RRRAG  KRKAN+ S +SSSSTPSKR TREK++           GPLTRARQG  +   +    +   G KLE+++ +  S +A  +  L +   +LE L+A IEAEFE +RSRDSNAHVVPNHCGWFSW K H +EE  LPSFFNGKS  RTPD Y++IRN I+KKFHANP+VQIE KDL ++EV DLDA+QEVLEFLDYWGLINFHPFP  DS   SA+   D  AKKDSLLE LFHFE I+  P V+ K NLSTPS+PSG  PES++ +DL++ EGP+V+YHCNSCSADCSRKRYHCQ                                              KQAD+DLC DCF+NRKFGS MSSSDFILMEP +  GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMP ED FF+CDD ++D +SKET   P  ++D +     +  + E    +ED     PME SK ED  E+   +E ++     +    +ET K +D +  K      EN A+ A+ EAF+A+GY  T E +LSFA+VGNPVMAL                          A F A LVG +++ ASS  SLKSLS   P +QLAAR+CF+LEDPPD ++       A +T N+ AQN  + E ++ KG+      LS  + +   E S  EE     SP+D +T+   + N    A + E +   L ESS     K+ Q +V + SN +   S+  PS+ +ET G  T   PSQP +  K+V+M S+S   + +EPC + AS PV E S+ A+ S++++  S S    KNEQ+  VK     +ST   +A  DV +   S  SE  EPPQPV  NSV ENG T
Sbjct:    1 MEEKPAGSSATAGADSPASAEPASSRRRAGGLKRKANATSVNSSSSTPSKRLTREKAAISHPPIHNG--GPLTRARQGPNNLGSSASAAAAGAGFKLEDKVALSAS-EAATVAALEEEISKLEKLKASIEAEFEGIRSRDSNAHVVPNHCGWFSWSKIHLLEERALPSFFNGKSQTRTPDTYMKIRNWIVKKFHANPNVQIELKDLSELEVADLDAKQEVLEFLDYWGLINFHPFPQIDS---SANAYSDEAAKKDSLLEKLFHFETIQPSPLVLHKPNLSTPSVPSGLFPESSIAEDLVQPEGPAVEYHCNSCSADCSRKRYHCQKQVGCFLEFVSYCYRRKRYLAVPNHHLDRRRFIFTIIFVLSDYPLGKQADYDLCADCFSNRKFGSDMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPTEDAFFDCDD-DVDGSSKETTDQPTIVDDASVPKDGIEISEEKTGAKEDFPLALPMEASKQEDASELKVVQETAKLGNANEAIVGEETTKSKDTSEVKAAQHLGENLAVKALTEAFQAIGYLHTPEIQLSFAEVGNPVMALGSNKIVFLEDTLDQAHIPAKFILSNEAAFLARLVGSDVSTASSGCSLKSLSSDSPGMQLAARHCFLLEDPPDNQQEPAEPDCATETANQDAQNF-NQEGQAQKGNNADGGELSIDNSNRKIEDSAAEEKQPLNSPSDKSTENVNTANEAGTAVSHEVEHGKLKESSDSVLQKEPQINVLKESNEMPSNSECPPSSTKETEGTSTTV-PSQPKEVNKDVEMVSNSTPAENDEPCPSVASVPVEEESQTAETSKDVDMISDSLPAEKNEQQQPVKSNSVRDSTPSIEAPKDVDM-LSSMTSELKEPPQPVAPNSVVENGAT 905          

HSP 2 Score: 220.32 bits (560), Expect = 5.779e-55
Identity = 131/189 (69.31%), Postives = 155/189 (82.01%), Query Frame = 1
Query: 2950 ADKIEEGKSKNHDSTE--REDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            A K E+ K    +S +  + D++SIDK+KRAAV+ALSAAAVKAKLLA+QEEDQIRQL  SLIEKQL K+E KL+FFNEM+ V+MRV+EQLDRS+Q+LYHER QIIAARLGLPASSSR MPP    NR+A NFANS+ RPPMSM + RPP++RPMG++ PTPSN +VS T AGSSIRP  QD LSSVG K
Sbjct:  904 ATKAEDQKGSKRESADFKQNDDNSIDKVKRAAVSALSAAAVKAKLLANQEEDQIRQLAASLIEKQLRKLETKLAFFNEMDHVIMRVREQLDRSKQKLYHERAQIIAARLGLPASSSRGMPPQLPTNRIAMNFANSIPRPPMSMTSQRPPIARPMGTLAPTPSNTFVS-TTAGSSIRPSGQDKLSSVGMK 1091          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: W9R169_9ROSA (SWI/SNF complex subunit SWI3D OS=Morus notabilis GN=L484_026920 PE=4 SV=1)

HSP 1 Score: 607.446 bits (1565), Expect = 0.000e+0
Identity = 420/827 (50.79%), Postives = 528/827 (63.85%), Query Frame = 2
Query:  116 MEEKRRDAGNS-PAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEER------------ILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAM-NDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRS---VANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITS--QVLPSTLEETGGK-GTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533
            MEEKRRDAG S  A   S   EP ++RRRAG QKRK+ +L  S SSS PSKRATREKSS           GPLTRARQ   S + +L    G   A                 +L  E+V A  + E  +   ELEALE+ +EA+F+A+RSR ++AHVVP+HCGWFSW K H +EE  LPSFFNGKS +RT D YLEIRN IMKKFH+NPS QIE KDL ++EVGDLDARQEVLEFLD+WGLINFHPFPP  SAV  ADGD DG AKK SL + L+HFE+ +S   V+PK N++ P++PSG  PESA+ ++L+R     V+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN KF SGMSS+DFILMEPGE +GLSGGKWTDQETLLLLEALELYKENW+EIAEHVATKTKAQCILHF+QMPIED F + DD N+D+ SKE A PA+   D++        T       E+Q+ T PMETSK ED K+V  S++ S+     +VK  +E  K ++ +  K G E  E+C + A++EAFEAVGY LT E   SFA+VGNP MALA F A LVGP++A AS+ +SLKSLSG  P+I+LA R+CF+LEDPP D KEP    S   VAN             ED SL  ++K+ LS    E+ E            P+      KE      +EE    NL + S     KD  PS    S  + +  ++ PS ++E+ GK G   E ++    + +V+MS+    +KNEP    +     + +  A+  +N++  S S    KN++     I + +   P++A+ DV +
Sbjct:    1 MEEKRRDAGTSTSASGDSPATEPTSSRRRAGGQKRKSGNLGSSGSSSAPSKRATREKSSLSHPPIHN---GPLTRARQAPSSLSSSLASADGAPAASASGGAKPAAEQARVPGVLGGETVAAASVAEELRKESELEALESGLEAKFQAIRSRSNSAHVVPSHCGWFSWTKIHPIEERTLPSFFNGKSELRTADTYLEIRNWIMKKFHSNPSTQIELKDLSELEVGDLDARQEVLEFLDHWGLINFHPFPPTSSAVGGADGDGDGTAKKGSLADKLYHFEIPQSSMPVIPKNNVAAPAVPSGLFPESAIAEELVR-----VEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFDSGMSSTDFILMEPGEGAGLSGGKWTDQETLLLLEALELYKENWSEIAEHVATKTKAQCILHFVQMPIEDTFLDYDD-NMDSTSKENADPASTEKDQSVPKDAGEATKGETAASENQSPTSPMETSK-EDIKDVKASQDTSKPVEANEVKASQENSKRKEGSESKVGEETEEDCTIKALKEAFEAVGYPLTCEGSFSFAEVGNPAMALAAFLARLVGPDLATASAHNSLKSLSGNSPSIELAVRHCFLLEDPPNDNKEPAGLLSVDKVANGETQTDEIPCDKKEDSSL--EEKTCLSAPEGESQE-----------KPH----AAKEQEAVVASEEGDSVNLKKRSTSKIIKDQPPSTLGGSGELKAEGELPPSLVKESEGKSGQLPESTE---TLNDVEMSEPPPSEKNEPQQNVSLNFRSDSTHSAEDLKNVDAVSDSLPLEKNDKHGK--IVNSDGKPPSNAARDVDM 795          

HSP 2 Score: 204.527 bits (519), Expect = 3.087e-50
Identity = 123/182 (67.58%), Postives = 146/182 (80.22%), Query Frame = 1
Query: 2965 EGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            +G  + HD+ E +++  IDK+KRAA +A+SAAAVKAKLLA+QEEDQIR+L+  LIEKQL KME KL+FFNEME VVMRV+EQ+DRSRQRLYHER QIIAARLGLPASSSR MP     NR+  N A SV RPP+SM + RPP+SRPMGS+ P+PS P    T+AGSSI+P  QD LSSVGTK
Sbjct:  828 DGDKEKHDALETKEHK-IDKIKRAAASAISAAAVKAKLLANQEEDQIRRLSALLIEKQLQKMETKLAFFNEMENVVMRVREQMDRSRQRLYHERAQIIAARLGLPASSSRVMPSSLPGNRIGVNIAGSVTRPPLSMVSQRPPMSRPMGSVAPSPSIPL--PTLAGSSIQPPCQDKLSSVGTK 1006          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: B9RBE0_RICCO (Transcription regulatory protein SWI3, putative OS=Ricinus communis GN=RCOM_1674900 PE=4 SV=1)

HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0
Identity = 416/844 (49.29%), Postives = 539/844 (63.86%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAG---PSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNF----ATNEEDKKANLNESSIINQSKDHQPSVTRVSNTIT--SQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLK-KNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVT 2614
            ME+K     ++ AG   P+SAE   +++RRRA  QKRKAN+LS S++SSTPSKR TREK++           GPLTRARQ   +       G      K+EE++    + +A  +  L +   +LE L+  IEAEFE +RSRDSNAHVVP+HCGWFSW K H +EE  LPSFFNGKS +RTPD+Y+EIRN I+K+FH NP+VQIE KDL +++V D+DA+QEVLEFLDYWGLINFHPFP  DS    A+ D  G ++K+ LLE LFHFE I+    V+ + N+S+P++PSGF P+S++ D+L+R EGP+V+YHCNSCSADCSRKRYHCQ QAD+DLC DCFNN KFGS MSSSDFILMEP EA G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFF+C D ++D NSKET  P A  DET+  K+  ETTE KT     AK     TS  ED  EV   +E +    G++   V+ET K +D++  K      EN AL A+ EAFE VGY  T E++LSFA+VGNPVMALA F   LVG ++A AS+QSSLKSL+   P +QLAAR+CF+LEDPPD                                D+K       ++  E    EE     S N+ +  K  + N+    A++ E +   L E +     K+ Q S+ + +N I+  S+  PS+++ET    T    SQ  +  K+VDM   ++L   NEPC + AS  + E S+ A+ SE+++  S S P  +  +Q+ VK    G+ + P +A  DV+++S      +    QPV   S+ ENG T
Sbjct:    1 MEDKPAGGSSATAGGDSPASAE-PTSSSRRRASGQKRKANALSTSNASSTPSKRLTREKAAISQIPVHNG--GPLTRARQSPNNLGSTAAGGGI----KVEEKVAAVTATEAATIAALEEEVSKLEELKGGIEAEFEVIRSRDSNAHVVPHHCGWFSWPKIHPLEERALPSFFNGKSKIRTPDIYMEIRNWIVKRFHLNPNVQIELKDLSELDVADVDAKQEVLEFLDYWGLINFHPFPQTDSP---ANADGGGRSEKELLLEKLFHFETIQPCLPVISRPNVSSPALPSGFFPDSSIADELVRPEGPAVEYHCNSCSADCSRKRYHCQTQADYDLCADCFNNGKFGSDMSSSDFILMEPAEAPGISGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFDCCD-DVDGNSKETTDPPANMDETSAPKDGMETTEDKTG----AKQDQTLTSSTEDANEVKVCQEIARPDNGSEAIIVEETSKSKDISEVKADQHMGENFALKALTEAFEGVGYPSTPENRLSFAEVGNPVMALAVFLGRLVGRDVAIASAQSSLKSLNSESPGMQLAARHCFLLEDPPD--------------------------------DKKGPAGIGCNKKIEAFAPEEKQPPDSSNEESNKKLNTVNYAGIAASHAEVEPGKLKEFNESESEKEPQMSILKETNEISSKSETPPSSVKETEQSLTTVH-SQLTEISKDVDMVSDLKLSDSNEPCQSIASVLIEEPSQAAEVSEDVDMVSHSLPQENIEQQQKVKTNSAGDHSHPTEAPKDVKMLSSLPSEAKEPQQQPVAPISLVENGET 796          

HSP 2 Score: 221.861 bits (564), Expect = 8.839e-56
Identity = 126/182 (69.23%), Postives = 152/182 (83.52%), Query Frame = 1
Query: 2965 EGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            +GK +  DS E +D+ +IDK+K AA++ALSAAAVKAKLLA+QEEDQIRQL  SLIEKQLHK+E KLSFFNEM+ ++MRV+EQLD+SRQRLYHER QIIA RLG+P SSSRAMPP    NR+A N ANS+ RPP++M + RPP+SRPMG++ P PSNP+VS T AG+SIRP  QDNLSSV TK
Sbjct:  803 DGKKEKPDSNEIKDDHNIDKIKSAAISALSAAAVKAKLLANQEEDQIRQLAASLIEKQLHKLETKLSFFNEMDHIIMRVREQLDKSRQRLYHERAQIIATRLGIPPSSSRAMPPTLPTNRIAMNIANSIPRPPVNMNSQRPPISRPMGALAPIPSNPFVS-TTAGNSIRPSGQDNLSSVVTK 983          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A059ANS0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01261 PE=4 SV=1)

HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0
Identity = 371/705 (52.62%), Postives = 467/705 (66.24%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPSSAE---LEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXX-XXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLN----------ESSIINQSKD 2188
            MEE+RRDAG  PAG ++AE    + A+TRRRAG  KRKA++L  S  SS PSKR TR+KSS   +H   N  GPLTRARQG  S + A   G      K EE+   +E ++AE+    ++  E LEA           +RSR+++AHVVPNHCGWFSW K H +EE  L SFFNGKS  RT ++YLEIRN IMKKF ANP   IE KDL D+EVGD++ARQEVLEFLDYWGLINFHPF   DS     D D  G+AK+D ++E L+ FE  +    + P+ N + P MPSG   ESA+ +DL++ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFN+ KFGSGMSSSDFILMEP E  G++GG WTDQETLLLLEALELYKENW+EIAEHVATKTKAQCILHFLQMPI+D F +CDD ++D  SKE       ND+  ++++    T       EDQ +T PM+ SK ED  E    E+ S  +     K  ++  K ED  V    ++  EN AL A+REAFEA+GY  T ES +SF +VGNPVMALAGF + LVG ++AAAS++SSLKS+SG  P +QL  R+CF+LEDPPD +E   S+S+  +TG+   +N     D+  K D   S++   +E+  +  + EN+  PS  D+    KE    +T ++ K +NLN          ES I+ +S D
Sbjct:    1 MEERRRDAGTLPAGAAAAEPQSADSASTRRRAGGHKRKASALGASGPSSAPSKRVTRDKSSISHAHQIHN--GPLTRARQGPASASSAAPAGGLAAV-KSEEKKAAQEVLEAEEARRASERWEALEAAIEADFEA---IRSRNADAHVVPNHCGWFSWTKVHPLEERALASFFNGKSQSRTHNMYLEIRNKIMKKFRANPKSLIELKDLEDLEVGDVEARQEVLEFLDYWGLINFHPFLQSDSP--KTDADVIGVAKEDPMIEKLYRFEATQPCLPIAPRNNQAAPPMPSGLFSESAIFEDLVKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNSGKFGSGMSSSDFILMEPAELHGVTGGNWTDQETLLLLEALELYKENWSEIAEHVATKTKAQCILHFLQMPIQDAFLDCDD-DVDATSKENTDLTTTNDDAPISRDTPERTEGKTDPVEDQPQTSPMDISKAEDTHEGKVDEKTSSQEEANKSKVAQDIPKLEDAEVKVKDIK--ENLALKALREAFEALGYFSTPESSVSFGEVGNPVMALAGFLSRLVGSDVAAASARSSLKSVSGNSPGLQLVMRHCFILEDPPDHEELAGSQSLVKETGDVIPEN---GTDKEQKEDIIPSIT--SEEDLNIGEKCENSDHPSAGDIVEAAKELD--STVQQLKHSNLNVGSSDLLKNSESGIMKESND 687          

HSP 2 Score: 155.221 bits (391), Expect = 9.250e-35
Identity = 101/169 (59.76%), Postives = 123/169 (72.78%), Query Frame = 1
Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAG 3459
            D++++GK  +  +  + D  S+DKLKRAA +ALSAAAVKAKLLAD E DQIR L   L EKQLHK+E KL+F+NE+E V MRV+EQL+R+RQRLYHER QIIAARLG   SSSR  P    ANR+  N AN   R P SM + RPPL RP G++ P PSNP+VS + AG
Sbjct:  814 DQLKDGKGDHERAATKYD--SMDKLKRAAASALSAAAVKAKLLADHELDQIRHLALLLAEKQLHKVEMKLAFYNEVENVTMRVREQLERARQRLYHERAQIIAARLGYSGSSSRPNPATLPANRIPMNMANLAPRAPTSMPSQRPPLLRPPGNVAPNPSNPFVSTSTAG 980          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A072UM37_MEDTR (SWI/SNF complex subunit SWI3D OS=Medicago truncatula GN=MTR_4g069830 PE=4 SV=1)

HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0
Identity = 386/828 (46.62%), Postives = 510/828 (61.59%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQ----------XXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPM-ETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTC-----SRSVANDTGNRGAQNVKHSEDESLKGD-QKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDH-QPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533
            MEEKR      P+   +   EP  +RRRAG  KRK+ SL+ S+S+ST SKR TREK+S L      N  GPLTRARQ           + +G  A    +     + +  ++  E +K ++ E  +  +E     +A        +RSRD+NAHVVP HCGWFSW   H +E+ ++PSFFNG S  RTPD Y+EIRN IMKKFH+NP++QIE KDL ++++GD DARQE++EFLDYWGLINFHPFP  DSAV S  GD DG A+K+SLLE L+HFE ++S P  V K  L TP+M SG  PE A+ ++L++ EGP+V+   YHCNSCS DCSRKRYHCQKQADFDLCTDCFNNRKFG+GMS  DFILMEP EA+G+S GKWTDQETLLLLEALELYKENW EIAEHV TK+KAQCILHF+QMPIED F +CDD ++D  SKETA PAA N+   + ++ ++        +     K   ETS+ ED K     EE  + + G+D K  + T K ED N  K G E  ++C L A++EAF AVGY+   E   SFA+VGNPVMALA F A LVG ++A AS+ + +KSLSG  P+ ++A+R CFVLEDPPD+K+ T      S+S  + T     Q+     D+ L+ D QK+ ++    E+       +   S  P    + + E+ N   N E    N N+ SI     D  Q ++   S + T   +P + EE   + + +EP  P +  KE  +SDS   +KNE   +  S    EL +PA+  ++ +  S S PS +   QK +      ES +  D++ DV +
Sbjct:    1 MEEKR-----PPSTVDTPAPEPTPSRRRAGGNKRKSGSLNASNSASTSSKRITREKASPLHHPPPHN--GPLTRARQIPNNSSAAANSSTAGGSASAPAAVKHAPQTQALVVAAEQLKKKESEWESMEAEIEAEFKA--------IRSRDANAHVVPTHCGWFSWSDIHSIEKRMMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNIQIELKDLSELDIGDSDARQEIMEFLDYWGLINFHPFPSTDSAVAST-GD-DGEAEKNSLLEKLYHFETLQSCPPAVQKTGLITPAMTSGLFPEPAIAEELVKQEGPAVEMLEYHCNSCSGDCSRKRYHCQKQADFDLCTDCFNNRKFGTGMSPLDFILMEPAEAAGVSSGKWTDQETLLLLEALELYKENWTEIAEHVGTKSKAQCILHFVQMPIEDAFVDCDD-DVDAGSKETADPAATNNNLPMDEDKAKDASEVIENDISDSIKGHDETSQAEDVKVKDNQEETPKLQDGSDEKTSEGTPKLEDDNKVKLGEEVGDDCVLNALKEAFAAVGYSPEPEGPSSFAEVGNPVMALAAFLAQLVGSDLAVASAHNYIKSLSGNAPSTEIASRCCFVLEDPPDDKKDTATSERDSKSEGDQTDKNVQQDAAMLNDKDLEKDHQKTKIASDASEDKIHQASTDGGISEKP---ISSEGEAMN---NHESGLDNCNDPSISKAPNDQAQGTLHNSSGSTTKAEIPPSSEEVQERTSNEEPGHPIEEQKEGSVSDSHPSEKNEIQQSIKSNLPVELPKPAETPKSDDMVSDSMPSDTNKPQKQLSTNAVSESQKTTDSAMDVDV 804          

HSP 2 Score: 181.415 bits (459), Expect = 6.345e-43
Identity = 88/142 (61.97%), Postives = 110/142 (77.46%), Query Frame = 1
Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            +QEEDQIR+LT++LIEKQLHK+E KL+FFN+ME +VMRVKE LDRSR +LYHER  II++RLG+PASSSR +PP    NR+  NFANS+ RP  +M    P +SRP  +   T  NP +S T AGSS+RP SQ+NLSSVGT+
Sbjct:  898 NQEEDQIRELTSALIEKQLHKLETKLAFFNDMEHLVMRVKELLDRSRHKLYHERAMIISSRLGVPASSSRGVPPSIPTNRIPMNFANSLQRPQFNMNPQGPLISRPGSTAATTLPNPLMSATAAGSSVRPSSQENLSSVGTE 1039          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: G7JG42_MEDTR (SWI/SNF complex subunit SWI3D OS=Medicago truncatula GN=MTR_4g069830 PE=4 SV=1)

HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 386/828 (46.62%), Postives = 510/828 (61.59%), Query Frame = 2
Query:  116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQ----------XXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPM-ETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTC-----SRSVANDTGNRGAQNVKHSEDESLKGD-QKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDH-QPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533
            MEEKR      P+   +   EP  +RRRAG  KRK+ SL+ S+S+ST SKR TREK+S L      N  GPLTRARQ           + +G  A    +     + +  ++  E +K ++ E  +  +E     +A        +RSRD+NAHVVP HCGWFSW   H +E+ ++PSFFNG S  RTPD Y+EIRN IMKKFH+NP++QIE KDL ++++GD DARQE++EFLDYWGLINFHPFP  DSAV S  GD DG A+K+SLLE L+HFE ++S P  V K  L TP+M SG  PE A+ ++L++ EGP+V+   YHCNSCS DCSRKRYHCQKQADFDLCTDCFNNRKFG+GMS  DFILMEP EA+G+S GKWTDQETLLLLEALELYKENW EIAEHV TK+KAQCILHF+QMPIED F +CDD ++D  SKETA PAA N+   + ++ ++        +     K   ETS+ ED K     EE  + + G+D K  + T K ED N  K G E  ++C L A++EAF AVGY+   E   SFA+VGNPVMALA F A LVG ++A AS+ + +KSLSG  P+ ++A+R CFVLEDPPD+K+ T      S+S  + T     Q+     D+ L+ D QK+ ++    E+       +   S  P    + + E+ N   N E    N N+ SI     D  Q ++   S + T   +P + EE   + + +EP  P +  KE  +SDS   +KNE   +  S    EL +PA+  ++ +  S S PS +   QK +      ES +  D++ DV +
Sbjct:    1 MEEKR-----PPSTVDTPAPEPTPSRRRAGGNKRKSGSLNASNSASTSSKRITREKASPLHHPPPHN--GPLTRARQIPNNSSAAANSSTAGGSASAPAAVKHAPQTQALVVAAEQLKKKESEWESMEAEIEAEFKA--------IRSRDANAHVVPTHCGWFSWSDIHSIEKRMMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNIQIELKDLSELDIGDSDARQEIMEFLDYWGLINFHPFPSTDSAVAST-GD-DGEAEKNSLLEKLYHFETLQSCPPAVQKTGLITPAMTSGLFPEPAIAEELVKQEGPAVEMLEYHCNSCSGDCSRKRYHCQKQADFDLCTDCFNNRKFGTGMSPLDFILMEPAEAAGVSSGKWTDQETLLLLEALELYKENWTEIAEHVGTKSKAQCILHFVQMPIEDAFVDCDD-DVDAGSKETADPAATNNNLPMDEDKAKDASEVIENDISDSIKGHDETSQAEDVKVKDNQEETPKLQDGSDEKTSEGTPKLEDDNKVKLGEEVGDDCVLNALKEAFAAVGYSPEPEGPSSFAEVGNPVMALAAFLAQLVGSDLAVASAHNYIKSLSGNAPSTEIASRCCFVLEDPPDDKKDTATSERDSKSEGDQTDKNVQQDAAMLNDKDLEKDHQKTKIASDASEDKIHQASTDGGISEKP---ISSEGEAMN---NHESGLDNCNDPSISKAPNDQAQGTLHNSSGSTTKAEIPPSSEEVQERTSNEEPGHPIEEQKEGSVSDSHPSEKNEIQQSIKSNLPVELPKPAETPKSDDMVSDSMPSDTNKPQKQLSTNAVSESQKTTDSAMDVDV 804          

HSP 2 Score: 181.8 bits (460), Expect = 6.111e-43
Identity = 111/194 (57.22%), Postives = 143/194 (73.71%), Query Frame = 1
Query: 2929 GCILLFFADKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            G I     D    G    +D ++ + +SS +K+KRAAV+ L+AAAVKAK+LA+QEEDQIR+LT++LIEKQLHK+E KL+FFN+ME +VMRVKE LDRSR +LYHER  II++RLG+PASSSR +PP    NR+  NFANS+ RP  +M    P +SRP  +   T  NP +S T AGSS+RP SQ+NLSSVGT+
Sbjct:  848 GAIAGAVEDCAGNGMEVKNDGSKTKQDSSFEKVKRAAVSTLAAAAVKAKVLANQEEDQIRELTSALIEKQLHKLETKLAFFNDMEHLVMRVKELLDRSRHKLYHERAMIISSRLGVPASSSRGVPPSIPTNRIPMNFANSLQRPQFNMNPQGPLISRPGSTAATTLPNPLMSATAAGSSVRPSSQENLSSVGTE 1041          
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: V4SCB4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027804mg PE=4 SV=1)

HSP 1 Score: 541.576 bits (1394), Expect = 1.374e-168
Identity = 337/619 (54.44%), Postives = 434/619 (70.11%), Query Frame = 2
Query:  662 LEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGD------CDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXD-QAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES----TNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVD-MSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKN 2458
            +EIRN IMKKFH+NP  QIE KDL ++EVG LDARQEV+EFLDYWGLINFHPFP  +S+V ++DGD       D  AKK SLLE L+ FE I++ P V P  +++ P++PSG  PESA+ ++L +LEGP+V+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN KFGS MSSSDFILM PGEA+G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED+F +CDD ++D N KET   A  N +T+ +K+V+E +ESKT   + Q +T PMETSKPED  E+   E+ S+ K  +DVK  ++ LK ED +  K G E  EN AL A+REAFEAVGY  T E+  SFA+VGNPVMALA F A L GP++  AS++SSLKS+SG  P +QLAA++CF+LEDPP D+KE   S S+  +  +R  Q  +  ED ++K        D++   + HGD+  E S+ EE   + S N+  ++K        N  T E+D+  +LNE S     KD+QPS+   SN + S+VL S+ +E+ G+G++ EP+ P    K+   +SDS+   KNEP     S  V E S P+  +++++  S  P  S+N
Sbjct:    1 MEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFPHVESSVANSDGDRMTDADSDAAAKKGSLLEKLYRFEEIKAGPPVAPMPSITFPAVPSGLFPESAIAEELAKLEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDD-DVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQSFAEVGNPVMALAAFLALLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKEVARSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKES-GEGSSGEPAPPVDVEKDNSLLSDSLPSGKNEPDQPFISNSVAEPSPPSKLTKDVDMVS-DPQPSEN 616          

HSP 2 Score: 202.601 bits (514), Expect = 4.449e-50
Identity = 128/186 (68.82%), Postives = 144/186 (77.42%), Query Frame = 1
Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510
            D+  +G+ + HDS E +++  IDKLK AAVTALSAAAVKAKLLA QEEDQIRQL TSLIEKQL K+EAKL+FFNEM+ V MRV+EQL+RSRQRLY ER  II ARLG     SR M P   ANR    FANSVARPPMSM +PRPP+SRPM   + TPSNP+ S T AGSSIRP SQDNLSSVG K
Sbjct:  670 DQNRDGQDEKHDSKETKNDQYIDKLKHAAVTALSAAAVKAKLLACQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQERALIIQARLG----PSRVMQPSVPANRNPMTFANSVARPPMSMTSPRPPISRPMVPQSSTPSNPFGSTTTAGSSIRPSSQDNLSSVGMK 851          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 24
Match NameE-valueIdentityDescription
SWI3D_ARATH2.020e-14645.99SWI/SNF complex subunit SWI3D OS=Arabidopsis thali... [more]
SWI3C_ARATH1.383e-4238.60SWI/SNF complex subunit SWI3C OS=Arabidopsis thali... [more]
SSR2_SCHPO2.909e-2933.22SWI/SNF and RSC complexes subunit ssr2 OS=Schizosa... [more]
SWI3B_ARATH1.493e-2329.64SWI/SNF complex subunit SWI3B OS=Arabidopsis thali... [more]
SMRC1_HUMAN2.620e-2328.67SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN... [more]
SMRC1_MOUSE3.678e-2328.52SWI/SNF complex subunit SMARCC1 OS=Mus musculus GN... [more]
RSC8_YEAST1.224e-2230.58Chromatin structure-remodeling complex protein RSC... [more]
SMRC2_MOUSE3.174e-2229.41SWI/SNF complex subunit SMARCC2 OS=Mus musculus GN... [more]
SMRC2_HUMAN3.258e-2229.41SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN... [more]
SWI3A_ARATH1.473e-1927.96SWI/SNF complex subunit SWI3A OS=Arabidopsis thali... [more]

Pages

back to top
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M5VJC1_PRUPE3.316e-4852.56Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9HRP3_POPTR5.796e-5151.69DNA-binding family protein OS=Populus trichocarpa ... [more]
B9H0P7_POPTR9.153e-4850.73DNA-binding family protein OS=Populus trichocarpa ... [more]
A0A067K099_JATCU5.779e-5548.36Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
W9R169_9ROSA3.087e-5050.79SWI/SNF complex subunit SWI3D OS=Morus notabilis G... [more]
B9RBE0_RICCO8.839e-5649.29Transcription regulatory protein SWI3, putative OS... [more]
A0A059ANS0_EUCGR9.250e-3552.62Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A072UM37_MEDTR6.345e-4346.62SWI/SNF complex subunit SWI3D OS=Medicago truncatu... [more]
G7JG42_MEDTR6.111e-4346.62SWI/SNF complex subunit SWI3D OS=Medicago truncatu... [more]
V4SCB4_9ROSI1.374e-16854.44Uncharacterized protein OS=Citrus clementina GN=CI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..135
NoneNo IPR availablePANTHERPTHR12802:SF39SWI/SNF COMPLEX SUBUNIT SWI3Dcoord: 826..832
coord: 120..237
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 534..691
coord: 120..237
NoneNo IPR availablePANTHERPTHR12802:SF39SWI/SNF COMPLEX SUBUNIT SWI3Dcoord: 259..432
NoneNo IPR availablePANTHERPTHR12802:SF39SWI/SNF COMPLEX SUBUNIT SWI3Dcoord: 534..691
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 259..432
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 826..832
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 307..359
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 305..349
e-value: 2.9E-8
score: 43.5
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 308..343
e-value: 1.6E-8
score: 34.1
IPR000433Zinc finger, ZZ-typePROSITEPS01357ZF_ZZ_1coord: 311..337
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 305..351
score: 8.978
IPR001005SANT/Myb domainSMARTSM00717santcoord: 364..412
e-value: 1.5E-12
score: 57.7
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 366..409
e-value: 1.2E-11
score: 44.5
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 145..236
e-value: 1.2E-16
score: 59.8
IPR007526SWIRM domainPFAMPF04433SWIRMcoord: 147..232
e-value: 2.6E-18
score: 66.0
IPR007526SWIRM domainPROSITEPS50934SWIRMcoord: 144..241
score: 19.408
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 362..406
e-value: 2.3E-8
score: 33.2
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 363..416
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 151..233
IPR017884SANT domainPROSITEPS51293SANTcoord: 363..414
score: 22.659

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092725 ID=g.barbadense_cottongen_reftransV1_0092725; Name=g.barbadense_cottongen_reftransV1_0092725; organism=Gossypium barbadense; type=contig; length=4555bp
AATCAATTACCTTAGCCTGGCGATAGCAAAATCACAGCAACAAATTTCAC
ACTGACAGACTCAAAGTTCATTTTTTTTTTTGCCTTCTGGAAAACCAATC
TCCTGACCCGTGGTGATGGAGGAGAAACGCCGGGACGCGGGGAACTCACC
GGCTGGACCGAGCTCAGCCGAGCTGGAGCCGGCAACAACTCGCCGTCGAG
CTGGAGCACAAAAGAGGAAAGCTAATTCTCTTTCCGGGTCCAGCTCATCA
TCGACGCCGTCGAAACGGGCTACACGGGAGAAGTCATCTAACTTGATCTC
CCACTCTTCGATCAACCATAACGGTCCTTTAACTAGGGCTCGCCAAGGAG
CGCCTAGTGGAAACCTAGCCTTGGGTTTGGGCTCGGGATTCGGTGGCGCG
AAGCTTGAGGAGAGGATTTTGGTTAAAGAGAGTGTGAAGGCTGAAGATTT
GGAGGAATTGAATAAGGCAAGTGAAGAGTTGGAGGCTTTGGAAGCTAAGA
TTGAAGCTGAGTTTGAAGCTGTTAGGTCTCGTGACAGTAATGCGCACGTG
GTTCCTAATCATTGCGGATGGTTTTCATGGAAAAAAGCTCACCATGTGGA
GGAATGTATATTACCTTCATTCTTTAATGGGAAATCCCCAGTGCGTACCC
CTGATGTGTACTTGGAGATACGTAATAGCATTATGAAGAAATTTCATGCA
AATCCGAGTGTACAAATTGAGTCTAAAGATCTGCCAGATATTGAAGTTGG
CGACTTGGATGCAAGGCAGGAAGTACTGGAGTTCTTGGACTACTGGGGTT
TGATTAACTTTCATCCATTCCCTCCAGGTGATTCTGCCGTGGTCAGCGCT
GATGGTGATTGTGACGGGATAGCGAAAAAGGATTCTTTGCTTGAAAATTT
GTTTCATTTTGAGGTGATTGAATCGCGCCCATCAGTTGTTCCCAAAGCTA
ACCTTTCAACTCCATCCATGCCATCTGGGTTTCTTCCTGAATCTGCAGTT
CTTGATGATTTGTTGAGACTTGAGGGACCATCTGTTGATTACCATTGCAA
CTCTTGTTCAGCTGATTGCTCTCGGAAGCGCTACCATTGCCAGAAGCAGG
CAGATTTTGACTTATGTACTGATTGCTTTAACAACCGGAAGTTTGGCTCT
GGCATGTCTTCTTCTGATTTTATTCTCATGGAGCCTGGTGAGGCCTCTGG
CCTTAGCGGCGGGAAGTGGACAGATCAGGAAACTCTCCTTCTTCTCGAGG
CACTAGAACTTTATAAAGAAAACTGGAATGAGATTGCAGAGCATGTTGCG
ACAAAAACCAAAGCTCAATGCATACTGCACTTTCTTCAAATGCCAATTGA
GGATGTATTTTTTAATTGTGATGATAATAACATAGACACGAATTCAAAAG
AAACTGCTGGCCCAGCTGCCATGAATGATGAAACAACTGTCGCTAAAGAA
GTCTCGGAAACAACAGAGAGTAAGACTACTCAAGAAGATCAGGCCAAGAC
TAAGCCGATGGAAACTTCAAAACCTGAAGATGAAAAAGAAGTCGGGGGTA
GTGAGGAACCATCAGAAACCAAAACTGGAACTGATGTAAAAGGTGTTAAA
GAAACATTAAAGCCAGAAGATATGAATGTACCAAAAGATGGACTAGAAGC
AACTGAAAATTGTGCCCTTACAGCAATAAGGGAGGCATTTGAAGCTGTCG
GTTATAATTTAACATCCGAAAGCAAACTTTCATTTGCTGATGTAGGAAAT
CCTGTCATGGCATTGGCAGGATTCTTTGCACATCTGGTTGGACCCAACAT
TGCTGCTGCTTCATCCCAGAGTTCACTTAAATCATTATCTGGTACTTGTC
CGAACATTCAACTGGCTGCCAGGAACTGCTTTGTTTTGGAAGATCCACCA
GATGAGAAGGAACCAACATGTTCTAGGAGTGTTGCCAATGATACGGGTAA
TCGGGGTGCTCAGAATGTGAAACACTCGGAAGACGAAAGCCTCAAGGGGG
ATCAGAAAAGTTCATTGAGCCACCATGGTGACGAAAACACTGAAGTCTCT
CTTCGTGAAGAGAATGCGACATCGCCTTCACCCAATGACCTAACCACGGA
TAAAAAAGAGTCAACCAATTTTGCCACTAATGAGGAAGATAAAAAAGCTA
ATTTGAATGAATCCAGCATTATTAATCAATCAAAGGATCATCAACCAAGT
GTAACAAGGGTATCAAATACCATAACATCCCAGGTTCTACCAAGTACTCT
AGAGGAGACAGGTGGGAAGGGAACAGCTAAAGAACCTTCTCAGCCTCCAA
AAGCAGTGAAGGAAGTAGATATGTCTGATTCTGTTCAACTGAAAAAGAAT
GAGCCTTGTGATGCCGCTGCATCAAAGCCAGTGGGAGAGCTATCTGAACC
AGCAGATGCATCAGAAAATCTAGAGACAGCTTCCTGCTCTCCATCCAGAT
CAAAGAATGAGCAAAAAACTGTTAAACCAATCCCTGATGGGGAATCTACG
GAGCCTGCAGATGCATCAGATGATGTTCAACTGGTGTCTGTTTCACAACC
ATCTGAAAGGAGTGAACCTCCACAGCCAGTCACATCGAATTCAGTAAATG
AAAATGGAGTAACGACAGGTTTCTCTCTTTTCTTCTATAAATATCTTGTT
AGAAAGTGGAAGCCGCATTAACAGAATCTAACTCTACTGCAAAATGCTTA
GCAATATCTTATGGGAATATGTAGGGATAGATAGCGTCTGATTTAAAATA
TACAAAGAAGGCTAAAAGGAACAGTTGGTTCTATAAGGTTGAGCGTTTGC
TATCTTTATTGGTTTTACATAGAGCAGCTAGGAAAATTGAAACTTGATAC
ATAATGTTGTTTCTACTAGGTTCTGTAGAGGTATGTATTCCAAGAACCAC
CTGCTGGCAAAATGCATAGATCAATTTTGGGTGTATCTTATTGTTCTTTG
CAGACAAGATCGAAGAAGGTAAAAGCAAGAACCATGACTCTACAGAGAGA
GAAGATAATAGTAGCATTGATAAATTAAAGAGAGCTGCAGTTACAGCACT
CTCAGCAGCAGCAGTGAAGGCAAAACTTCTAGCAGACCAGGAAGAGGACC
AAATCCGACAACTTACCACATCATTAATAGAAAAGCAGTTACATAAGATG
GAAGCCAAATTATCTTTCTTCAATGAGATGGAGGGAGTCGTAATGAGGGT
GAAGGAGCAATTGGACAGGTCAAGGCAAAGGCTTTACCATGAGCGAACGC
AGATAATTGCTGCTCGACTGGGCTTACCAGCTTCCTCCTCTAGAGCAATG
CCACCACCAAATGCTGCAAATAGAGTTGCAACAAACTTTGCAAACTCGGT
TGCAAGGCCTCCAATGAGCATGAAAGCCCCAAGACCACCATTGTCGAGAC
CCATGGGTTCTATGACCCCTACCCCTTCCAACCCATATGTATCCAATACA
GTTGCAGGGAGTTCAATTCGACCTGGTAGCCAAGACAATCTTTCCTCCGT
TGGAACCAAGTAGTCTCTATTCATATTACTTGTGAATAGAATTTTTCAAT
CCATTCTTATACAAGGGTCATCCATCTTGAGATGCATCTGGTTAGTACCC
CCTTTTTTTATTGTTGCAGTTTCTGTTCTTAACGCTGCCAGTCATCTTGG
GTGCATTTAAGAACTTGAGAATATACTCAAGCTGAACTCATGGCATATTC
ATATCTGATGTTTTCTGCTAATTCCAGCCACACCACTGATTTATCTCCGG
ATACTGCGGCCTATATTACATAATTGACTGGCATCACATCATCATAGGAG
GAAGGAGTAGATGGTTATTGTTCTCCCTTCAATCCTAATCTAGTCAACAA
CAGTCTATAGCCTTTGTCTAACTTGGAATTTTCTTGAATGCTTTTGGGTT
TTTGTAAGTCTAGTTTGTAGTTGATATTTTGAGACCTCAAATGATGAATT
TAGGTACTGCAAAGTTAAACATCCGTAACCATACCAAATTCTTAGGTCAT
CTTTAAGGTCAGATATAACCAATGTATTCTATATTTATGGATGAACAGAT
GTGTTTTTGTTGTTACAAAATGGCGTAAATCTCTTGGTTTGAAGCTCCCT
TTTCTCACCTGTAATGGCTTCCTTTAGTGTCATATATCCGACTACCCAAA
TTGCATTATATGCCTCTCGAGAACACCACACAGCACAGGCAGGAAAGTTA
GATCAGCTGAAATCAGGCTGCAAAATAACTTCTAAAAATGGGTTAACTTT
TAAATATTATAACAATTAAGTCCCTTAAGTCTGACACGTTTCAAACCTAA
CGAAAGCAACAGGGGGCCAACATTATTGGTGGAATAAACAATCACTCCTA
ATCCATACAAGAAGAAGAAGAAAAAACTAGCAAGATAATCATCTTAATAA
TGAATTACAGTCACATTATACTCAACAATGGCGTCGCCAGTCTTGAAATT
TACGGTATAAGTCTTGAGTTGTGCATACCCTTTCGCCATCCTGAACTTCC
CTTTCCCTCCGACCACCGCAAGCTCACGCTCCGATTCGGTAATTGGATTC
CTCGA
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ
IPR001005SANT/Myb
IPR011991ArsR-like_HTH
IPR007526SWIRM
IPR009057Homeobox-like_sf
IPR017884SANT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO:0003677DNA binding