g.barbadense_cottongen_reftransV1_0092725, g.barbadense_cottongen_reftransV1_0092725 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3D_ARATH (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=3) HSP 1 Score: 480.715 bits (1236), Expect = 2.020e-146 Identity = 367/798 (45.99%), Postives = 485/798 (60.78%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATT-----RRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSE----TKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPD-EKEPTCSRSVANDT-GNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSI-----INQSKDHQPSVTRVSNTITSQVLPST-------LEETGGKG-----------------TAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGE 2389 MEEKRRD+ + A S+ PA+ RRR G KRKAN+L GS+ S+ + + +++ S HNGPLTRARQ A ++ + + K ++ EE NKA E EALEAKIEA+FEA+RSRDSN HVVPNHCGWFSW+K H +EE LPSFFNGK RT +VY EIRN IM KFH+NP++QIE KDL ++EVGD +A+QEV+EFLDYWGLINFHPFPP D+ ++D D + K+SLL +L+ F+V E+ P +V K + + PSG P+ D+LL+ EGP+V+YHCNSCSADCSRKRYHC KQADFDLCT+CFN+ KF S MSSSDFILMEP EA G+ GKWTDQETLLLLEALE++KENWNEIAEHVATKTKAQC+LHFLQMPIED F + D D SK+T A D+ +V K+ E E+K ++ K E +PED E S+E S+ ++ +++ ++T K E + EA EN AL A+ EAFE VG++ T E+ SFAD+GNPVM LA F L G ++A AS+++S+KSL + LA R+C++LEDPPD +K+PT S+S + D GN +D S K DQ S + EVSL ++ P TD + T + +EE + + E+S + + + +P T S + PS L+E G +A + SQ P+A ++V+M D++Q +K+ P D K VGE Sbjct: 1 MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLTREKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKS----EVLNVAVGADGEKPKEEEERNKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHD--DLGDKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYK-DPISKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMK--EVPEPEDGNEEKVSQESSKPGDASEETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNS-GMLLATRHCYILEDPPDNKKDPTKSKSCSADAEGN---------DDNSHKDDQPEEKSKKAE---EVSLNSDDREMPD-----TDTGKETQDSVSEEKQPGSRTENSTTKLDAVQEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQSTVSQSAADASQ-PEASRDVEMKDTLQSEKD-PEDVV--KTVGE 767 HSP 2 Score: 140.969 bits (354), Expect = 2.764e-32 Identity = 86/140 (61.43%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 3088 QEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPAS-SSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSI-RPGSQDNLSSV 3501 QEEDQIRQL+ SLIEKQLHK+EAKLS FNE E + MRV+EQL+RSRQRLYHER QIIAARLG+P S SS+A P NR+A NFAN RPPM M PR P P P + + T+ GSS PGS DN+SSV Sbjct: 852 QEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQRLYHERAQIIAARLGVPPSMSSKASLP---TNRIAANFANVAQRPPMGMAFPR--PPMPRPPGFPVPGSFVAATTMTGSSDPSPGS-DNVSSV 985
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3C_ARATH (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.383e-42 Identity = 110/285 (38.60%), Postives = 161/285 (56.49%), Query Frame = 2 Query: 542 AHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVG-DLDARQEVLEFLDYWGLINF------HPFPPGDSAVVSAD--GDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASG-LSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFN 1366 HV+P H WF+ +E ++P FF+GKSP TP+ Y+E RN+I+ K+ NP + D + G D++ V FLD+WG+IN+ HP P D + V D G+ + + + +++L F+ +P+ K S+PS +S LD +R+ D HCN CS + QK+ D LC DCF++ +F G S DF+ ++P + G G WTDQETLLLLEA+ELY ENW +IA+HV +K+KAQCILHFL++P+ED + Sbjct: 175 VHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSIDSLIKFD----KPNCRHKGGEVYSSLPS-LDGDSPDLD--IRIREHLCDSHCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLD 452 HSP 2 Score: 60.4622 bits (145), Expect = 1.352e-7 Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSS 3291 D EE +I++L+ +++ QL +ME KL F E+E ++M+ EQ++++RQR ER ++++AR G P S Sbjct: 599 DHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAERARMLSARFGSPGGIS 667
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SSR2_SCHPO (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 2.909e-29 Identity = 95/286 (33.22%), Postives = 145/286 (50.70%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSA--VVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEG-------------PSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVF 1360 +VP++ GWF K H +E P FFNGKSP++TP +Y + R+ ++ + P+ + VGD+ A V FL+ WGLIN+ P A + G I+ + + E++ P P + S L E L +E P VD C +C +CS+ YH K +D+C +C+ +F S +SSDF+ M+ + + W++QETLLLLEA+E Y ++WN+IA HV ++TK QC++HFLQ+PIED + Sbjct: 19 IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVTACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPPISGHVQAISNTPIVTQ-----EMLAQHPP--PSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVDKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPY 297
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3B_ARATH (SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.493e-23 Identity = 83/280 (29.64%), Postives = 131/280 (46.79%), Query Frame = 2 Query: 539 NAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDN 1378 N HV P++ WFSW + E LP FF+ +S + P YL +RNSI+K++ + +I D+ V D+ + + V +FLD WGLIN++ S +E E+ S A S P+ + E+A +CN C A CS + C K D LC C+ + G++SS+F +E E S +W+D+E LLLLEA+ Y ++W ++A HV +T+ C+ F+++P + F D+ Sbjct: 47 NIHV-PSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSIRRVFDFLDSWGLINYNS----------------------SASAKPLKWEEKEAGKSAGDAA-----SEPATTVKETA-------------KRNCNGCKAICSIACFACDKY-DLTLCARCYVRSNYRVGINSSEFKRVEISEE---SKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDS 281
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC1_HUMAN (SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 2.620e-23 Identity = 82/286 (28.67%), Postives = 136/286 (47.55%), Query Frame = 2 Query: 527 SRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNI 1384 + +N ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGL+N+ P + HF V+ PS + +L +P +P+ +L+ + + VD +F L TD ++ + +S +G +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + D ++ Sbjct: 443 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTP--------------HFNVLADTPSGLVPLHLRSPQVPAA----QQMLNFPEKNKEKPVDLQ-------------------NFGLRTDIYSKKTLAKSKGAS-------------AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASL 678
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC1_MOUSE (SWI/SNF complex subunit SMARCC1 OS=Mus musculus GN=Smarcc1 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.678e-23 Identity = 85/298 (28.52%), Postives = 139/298 (46.64%), Query Frame = 2 Query: 527 SRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAA 1420 + +N ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGL+N+ P + HF V+ PS + +L +P +P+ +L+ + + +D +F L TD ++ + +S +G +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + NS + GP A Sbjct: 442 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTP--------------HFNVLADTPSGLVPLHLRSPQVPAA----QQMLNFPEKNKEKPIDLQ-------------------NFGLRTDIYSKKTLAKSKGAS-------------AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE--------NSDASLGPLA 681
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: RSC8_YEAST (Chromatin structure-remodeling complex protein RSC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSC8 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.224e-22 Identity = 89/291 (30.58%), Postives = 136/291 (46.74%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVV--SADGDCDGI-----AKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLD---DLLRLEGPSVD-------YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQ-CILHFLQMPIEDVFF 1363 ++P+ WF K H +E+ P FFN S +TP Y + RN I+ + +P + + D+ + ++ FL+ WGLIN+ P +++ S G + K L EN+ EV E P+ P + V D D L+ S + Y C++C + RYH + D +LC+ CF FG+ SSDFI + E +G S K W+DQE LLLLE +E+Y++ W +IA+HV + + CI FL +PIED + Sbjct: 81 IIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTITAVRRNVAMDVASIVKIHAFLEKWGLINYQIDPRTKPSLIGPSFTGHFQVVLDTPQGLKPFLPENVIKQEV-EGGDGAEPQVK---KEFPVNLTIKKNVYDSAQDFNALQDESRNSRQIHKVYICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRL---ENNGNSVKKNWSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYI 364
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC2_MOUSE (SWI/SNF complex subunit SMARCC2 OS=Mus musculus GN=Smarcc2 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.174e-22 Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFF 1363 ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGLIN+ V A+ + + HF V+ PSG +P L+ + P + + +F L TD + + S +A+ + +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ---------VDAESRPTPMGPPPT-----SHFHVLA--------------DTPSGLVP--------LQPKPPQQSSASQQMLNFPEKGKEKPADMQNFGLRTDMYTKKNVPSK-----------SKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL 649
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC2_HUMAN (SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.258e-22 Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFF 1363 ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGLIN+ V A+ + + HF V+ PSG +P L+ + P + + +F L TD + + S +A+ + +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ---------VDAESRPTPMGPPPT-----SHFHVLA--------------DTPSGLVP--------LQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSK-----------SKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL 649
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3A_ARATH (SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana GN=SWI3A PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.473e-19 Identity = 78/279 (27.96%), Postives = 122/279 (43.73%), Query Frame = 2 Query: 545 HVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSAD------GDCDGI---AKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFL--PESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPI 1348 + +P WF W H +E FF S RTP VY E R+ I+ KF + ++ + VGD++ Q+V FL+ WGLINF + ++S D G GI A +SL RP P L + +G P ++ D L+ P C C C Y K ++C CF N +G ++ DF L+ + WT++E LLLLE++ + ++W I++ V+TK++ CI +++P Sbjct: 13 YTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIEQGTPAGIRVTATPNSL------------RPITAPP--LVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCGERCDSPFYQHNK-GIVNICEKCFKNGNYGENNTADDFKLI-----GNSAAAVWTEEEILLLLESVLKHGDDWELISQSVSTKSRLDCISKLIELPF 271
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: M5VJC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000770mg PE=4 SV=1) HSP 1 Score: 640.188 bits (1650), Expect = 0.000e+0 Identity = 442/841 (52.56%), Postives = 567/841 (67.42%), Query Frame = 2 Query: 116 MEEKRRDAGNS--PAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQ-AKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENAT--SPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQP-SVTRVSNT-ITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVT 2614 MEEKRRDA + P+ S EP++ RRR GAQKRKA+SL GS+SSSTPSKR TREK+ GPLTRARQG S A G+ + V E+V EL K ELEALEA +EAEFEA+RSR++NAHVVP+HCGWFSW K H +EE +LPSFFNGKS RTPD YLEIRN IMK FHANP V IE KDL ++EVGD DARQEV+EFLD+WGLINF P PP SAV SA+GD G+A+KDSL++ L+HFE ++SR SVVPK N++TP++PSG PESA+ ++L+R EGP+V+YHCNSCSADCSRKRYHCQKQADFDLCTDCF+N KF SGMSSSDFILMEP EA G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED F + +D +ID ++KETA P + ++E+ K+ ETTE+KT + +T P+ETSK E VG ++ S+ + +VK +ET K ED K E E+ AL A++EAFE VGY TSE +LSFA+VGNP MALA F A LVGP++A AS+ +SLKS+S + P +LAAR+CF+LEDPP D KE SV + Q ED+S K D +S G E+ ++S + + PSP + + +E ++EE + NLN+S + KD P +V ++ ++ + ++ PS+ +E+G + +PS+P K+VDM DS+ K++P S V E +AS++L+ ++ S+ Q+ V + E P + S DV +VS QP E+ + QPV SNS+ E G + Sbjct: 1 MEEKRRDAAGAQPPSNAESPAAEPSSARRRGGAQKRKASSLGGSTSSSTPSKRFTREKAMLSHPPIHN---GPLTRARQGPSSLGSASASGAAVKPTVAKRPDPVGEAV-----AELVKRESELEALEASMEAEFEAIRSRNANAHVVPSHCGWFSWTKVHPIEEQMLPSFFNGKSETRTPDAYLEIRNCIMKIFHANPGVFIELKDLLELEVGDFDARQEVMEFLDHWGLINFDPSPPTGSAVASAEGD--GLAEKDSLVDKLYHFEALQSRSSVVPKTNITTPTVPSGLFPESAIAEELVRPEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNGKFDSGMSSSDFILMEPAEAPGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFLDYED-DIDASAKETADPTSTDNESLAPKDAPETTENKTGASESDPQTSPVETSKEVTEVNVG--QDTSKPEDVNEVKVGEETSKLEDTGELKVDQETDESFALNALKEAFEVVGYPPTSEGQLSFAEVGNPAMALAAFLARLVGPDVAIASAHNSLKSISASSPGTELAARHCFLLEDPPSDNKEQAGPDSVVAEVLKDKVQEDIVDEDKSQKEDNATS----GLEDKDLSNDKGDNILEKPSPEEKSQSAEEQDGIVSHEEVEADNLNKSDNLELPKDQSPTTVGKLDDSKLEAENPPSSEKESGEGISVGKPSEPTDTPKDVDMCDSLPSTKDKPQQPVTSNSVEEPPRSTEASKDLDVSNSLASQMNEPQQPVTAKSE-EPPRPTEESKDVDMVSDPQPQEQDDSQQPVASNSMVETGAS 823 HSP 2 Score: 198.364 bits (503), Expect = 3.316e-48 Identity = 127/186 (68.28%), Postives = 148/186 (79.57%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D+ +GKS+ HD+ E + + IDKLK AAV+ +SAAAVKAKLLA+QEEDQIRQL LIEKQLHK+EAKL FF+EME VVMRV+EQLDRSRQ+LYHER QIIAARLGLP SSSR MP ANR+A N ANSV RPP++M + RPP+SRPMG PT SN + +AGSSIRP SQD LSSVG+K Sbjct: 825 DQTNDGKSEKHDTIETKVDQKIDKLKHAAVSTISAAAVKAKLLAEQEEDQIRQLAAMLIEKQLHKLEAKLGFFSEMENVVMRVREQLDRSRQKLYHERAQIIAARLGLPGSSSRPMPSSMPANRMAMNVANSVPRPPLNMTSLRPPMSRPMGPTAPT-SNQFSPTALAGSSIRPPSQDKLSSVGSK 1009
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: B9HRP3_POPTR (DNA-binding family protein OS=Populus trichocarpa GN=POPTR_0009s11780g PE=4 SV=1) HSP 1 Score: 630.172 bits (1624), Expect = 0.000e+0 Identity = 427/826 (51.69%), Postives = 532/826 (64.41%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERI-----LVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXX-XXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLS------HHGDENTEVSLREENATSPSPNDLTTDKKESTNFA----TNEEDKKANLNESSIINQSKDHQPSVTRVSNTI--TSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDM-SDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533 MEEK AG+ P+SAE P +RRR G KRKANSLS SS PSKR TREK++ + GP TRARQ + K+ + LV+E +++ +E L+ +IEAEFE +RSRDSNAH+VP+HCGWFSW K H +EE +LPSFFNGKS RTPD YLEIRN IMKKF++NP+ IE KDL ++EV DLDARQEVLEFLDYWGLINFHP DSA + D D AKKDS LE LF FE I+ PS+VPK NL+ P+ S PESA+ ++L +LEGPSV+YHCNSCSADCSRKRYHCQKQAD+DLC DCFNN KFGS MSSSDFILMEP EA+G SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED FF+ N+++ SK T A DET+ K+V +T+ESKT EDQ T PME SKPED EV GS+E +E + ++V E K ED + K E EN AL A+ EAFEAVGY+ T E++LSF++VGNPVMALA F A LVGPN+A AS++SSLKSLS P +QLAAR+CF+LEDPP+E K+P+ S VA + + AQ K E + S L H D+ S+ EE + + +K + N A ++EE + ESS KDH PS+ + S+ I S PS+ +ET +A+E SQ + K+VDM SD +KNEP + AS V E S+ DAS++++ S S K+ + G+ ++P +++ DV + Sbjct: 1 MEEK--PAGSYADSPASAE--PGPSRRRPGGHKRKANSLSNFFSSPLPSKRLTREKAAISNLSNHN---GPFTRARQIPNILASSALSAGVKVEQKVATAVPDAAALVEEERRSK-----------VEELQTEIEAEFEVIRSRDSNAHIVPSHCGWFSWTKIHPLEERLLPSFFNGKSQSRTPDTYLEIRNWIMKKFNSNPNTLIEVKDLSELEVSDLDARQEVLEFLDYWGLINFHPLQ-FDSA---PNADGDEAAKKDSSLEKLFCFEAIQPCPSIVPKPNLAAPTTSSRLFPESAIAEELAKLEGPSVEYHCNSCSADCSRKRYHCQKQADYDLCADCFNNGKFGSNMSSSDFILMEPAEAAGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDAFFDV-TNDMNGTSKVTVDADATVDETSGPKDVLDTSESKTGASEDQPLTPPMEASKPEDTSEVKGSQESTENEKSSEVINGPEISKSEDASGVKVSEEMGENVALRALTEAFEAVGYSPTPENRLSFSEVGNPVMALASFLARLVGPNVATASARSSLKSLSSNYPGMQLAARHCFLLEDPPEERKKPSGSDCVATEMADHDAQKDKQEEKNQKENSPTSGLGDRDLSDDHRDKKVGDSVPEEKKPLDTSKGDSPEKVNAVNEAETAVSHEEVEPCRSKESSNSELPKDHTPSIVKESDGIPPKSACPPSSFKETLEVSSAEEHSQLTEVAKDVDMVSDLKSSEKNEPSQSVASMSVDEHSQAGDASKDVDMVSDSLPADKDGSQQPAKSNAGDHSQPTESTADVDM 803 HSP 2 Score: 206.838 bits (525), Expect = 5.796e-51 Identity = 127/187 (67.91%), Postives = 149/187 (79.68%), Query Frame = 1 Query: 2962 EEG----KSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 EEG K + DS +D++ IDK+KRAAV+ALSAAAVKAKLLA+QEEDQIRQL SLIEKQLHK+E KL+FFNEM+ V+MRV+EQLDRSRQRLY ER QIIA+RLGLP SSRA+PP ANR+A NFAN+ RPPMSM A RPP+SRPMG++ PTP + T AG+SIRP Q+ LSSVGTK Sbjct: 825 EEGPKDSKKEKLDSEVIKDDNKIDKIKRAAVSALSAAAVKAKLLANQEEDQIRQLAASLIEKQLHKLEMKLAFFNEMDSVIMRVREQLDRSRQRLYQERAQIIASRLGLPP-SSRAVPPSLPANRIAMNFANAFPRPPMSMTAQRPPISRPMGALAPTPDTLVSTTTTAGNSIRPSGQEKLSSVGTK 1010
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: B9H0P7_POPTR (DNA-binding family protein OS=Populus trichocarpa GN=POPTR_0004s16070g PE=4 SV=1) HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0 Identity = 419/826 (50.73%), Postives = 523/826 (63.32%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGP---SSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETA-GPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTN----FATNEEDKKANLNESSIINQSKDHQPSVTRVSNTI--TSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQ-LKKNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533 MEEK PAG S A EPAT+RRRAG KRKA+ + SS + KR TREK+ GPLTRARQ + K+E++ V +V + +E L+A+IEAEFE +RSRDSNAHVVP+HCGWFSW + H +EE +LPSFFNGKS RTPD YL+IRN IMKKFHANP++ IE KDL ++EV D +ARQEVLEFLDYWGLINFHP +V +ADGD G AKKD LE LF FE I++ P VV K N + P+ PS PESA+ ++L +LEGPSV+YHCNSCSADCSRKRYHCQK+AD+DLC DCFNNRKFGS MSSSDFILMEP EA+G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED FF+C N++D SKETA A + D + + EDQ T PME SKPED V + G DV +ET K ED++ K G E EN AL A+ EAFEAVGY+ T E++LSF++VGNPVMA+A F A LVGP++A AS+ S+LKSLS P +QLA+R+CF+LEDPPDE K+P+CS VA + ++ A K E +S KG D K + D+ E S+ EE S DK + N T+EE + ESS KDH PSV + S+ I S PS+ +E +A+E SQ + K+VDM +++ +KN + AS V E S+ D S++++ S S P+ + Q+ VK GE ++ +A+ DV + Sbjct: 1 MEEK-------PAGSFADSPASFEPATSRRRAGGHKRKASLSNSLSSPLSS-KRLTREKAGFSNLSIHN---GPLTRARQIPYILASSAPSAGV----KIEQK--VVAAVPDAAAVVEEERRSRVEELQAEIEAEFEVIRSRDSNAHVVPSHCGWFSWTQIHSLEERLLPSFFNGKSQSRTPDTYLDIRNWIMKKFHANPNILIELKDLSELEVSDSEARQEVLEFLDYWGLINFHPL--QLDSVTNADGD--GAAKKDLSLEKLFRFEAIQTCPPVVTKPNFTAPTTPSRLFPESAIAEELAKLEGPSVEYHCNSCSADCSRKRYHCQKEADYDLCADCFNNRKFGSNMSSSDFILMEPAEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDAFFDC-ANDMDGTSKETADADATIEDTSAPKDVHDTSESKTGADEDQHLTVPMEASKPEDTSGV-------KVCQGGDVINGQETSKSEDVSGVKAGEEIGENVALRALTEAFEAVGYSPTPENRLSFSEVGNPVMAVASFLARLVGPDVATASACSALKSLSSNSPGMQLASRHCFLLEDPPDERKKPSCSDCVATEMADQDALKDKQ-EGKSQKGNSPTSGIDNKDLSDDYSDKKVEDSIPEEKKPLDSSKGEFPDKVDVVNGGEMVVTHEEVEPGRSKESSNSELPKDHTPSVVKESDEIPPKSGCPPSSGKEPLEVTSAEEHSQLTEVAKDVDMVSNLKPPEKNGHSQSFASMSVDEPSQAVDVSKDVDMVSDSLPADNNGSQQPVKSNATGEQSQTTEATADVDM 796 HSP 2 Score: 196.823 bits (499), Expect = 9.153e-48 Identity = 123/189 (65.08%), Postives = 152/189 (80.42%), Query Frame = 1 Query: 2950 ADKI-EEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTV-AGSSIRPGSQDNLSSVGTK 3510 AD++ ++ K + DS +D+++IDKLKRAAV+ALSAAAVKAKLLA+QEEDQIR+L SLIEKQLHK+E KL+FFNEM+ V+MRV+EQLDRSRQRLY ER QIIAARLGLP SSRAMP +NR+A NFAN+ RPPM+M RPP+S PMG++ TP +VS T AG+SIRP SQ+ +SS+GTK Sbjct: 818 ADEVPKDSKKEKPDSEVIKDDNNIDKLKRAAVSALSAAAVKAKLLANQEEDQIRELAASLIEKQLHKLETKLAFFNEMDSVIMRVREQLDRSRQRLYQERAQIIAARLGLPP-SSRAMPQSLPSNRIAMNFANTFPRPPMNMATQRPPISTPMGTLANTPPGTFVSTTTAAGNSIRPSSQEKISSIGTK 1005
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A067K099_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18808 PE=4 SV=1) HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0 Identity = 443/916 (48.36%), Postives = 557/916 (60.81%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQ----------------------------------------------KQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAG-PAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMAL--------------------------AGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQK--SSLS-HHGDENTEVSLREENATSPSPNDLTTDKKESTN---FATNEEDKKANLNESSIINQSKDHQPSVTRVSNTI--TSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDM-SDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKT-VKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVT 2614 MEEK + + S A EPA++RRRAG KRKAN+ S +SSSSTPSKR TREK++ GPLTRARQG + + + G KLE+++ + S +A + L + +LE L+A IEAEFE +RSRDSNAHVVPNHCGWFSW K H +EE LPSFFNGKS RTPD Y++IRN I+KKFHANP+VQIE KDL ++EV DLDA+QEVLEFLDYWGLINFHPFP DS SA+ D AKKDSLLE LFHFE I+ P V+ K NLSTPS+PSG PES++ +DL++ EGP+V+YHCNSCSADCSRKRYHCQ KQAD+DLC DCF+NRKFGS MSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMP ED FF+CDD ++D +SKET P ++D + + + E +ED PME SK ED E+ +E ++ + +ET K +D + K EN A+ A+ EAF+A+GY T E +LSFA+VGNPVMAL A F A LVG +++ ASS SLKSLS P +QLAAR+CF+LEDPPD ++ A +T N+ AQN + E ++ KG+ LS + + E S EE SP+D +T+ + N A + E + L ESS K+ Q +V + SN + S+ PS+ +ET G T PSQP + K+V+M S+S + +EPC + AS PV E S+ A+ S++++ S S KNEQ+ VK +ST +A DV + S SE EPPQPV NSV ENG T Sbjct: 1 MEEKPAGSSATAGADSPASAEPASSRRRAGGLKRKANATSVNSSSSTPSKRLTREKAAISHPPIHNG--GPLTRARQGPNNLGSSASAAAAGAGFKLEDKVALSAS-EAATVAALEEEISKLEKLKASIEAEFEGIRSRDSNAHVVPNHCGWFSWSKIHLLEERALPSFFNGKSQTRTPDTYMKIRNWIVKKFHANPNVQIELKDLSELEVADLDAKQEVLEFLDYWGLINFHPFPQIDS---SANAYSDEAAKKDSLLEKLFHFETIQPSPLVLHKPNLSTPSVPSGLFPESSIAEDLVQPEGPAVEYHCNSCSADCSRKRYHCQKQVGCFLEFVSYCYRRKRYLAVPNHHLDRRRFIFTIIFVLSDYPLGKQADYDLCADCFSNRKFGSDMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPTEDAFFDCDD-DVDGSSKETTDQPTIVDDASVPKDGIEISEEKTGAKEDFPLALPMEASKQEDASELKVVQETAKLGNANEAIVGEETTKSKDTSEVKAAQHLGENLAVKALTEAFQAIGYLHTPEIQLSFAEVGNPVMALGSNKIVFLEDTLDQAHIPAKFILSNEAAFLARLVGSDVSTASSGCSLKSLSSDSPGMQLAARHCFLLEDPPDNQQEPAEPDCATETANQDAQNF-NQEGQAQKGNNADGGELSIDNSNRKIEDSAAEEKQPLNSPSDKSTENVNTANEAGTAVSHEVEHGKLKESSDSVLQKEPQINVLKESNEMPSNSECPPSSTKETEGTSTTV-PSQPKEVNKDVEMVSNSTPAENDEPCPSVASVPVEEESQTAETSKDVDMISDSLPAEKNEQQQPVKSNSVRDSTPSIEAPKDVDM-LSSMTSELKEPPQPVAPNSVVENGAT 905 HSP 2 Score: 220.32 bits (560), Expect = 5.779e-55 Identity = 131/189 (69.31%), Postives = 155/189 (82.01%), Query Frame = 1 Query: 2950 ADKIEEGKSKNHDSTE--REDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 A K E+ K +S + + D++SIDK+KRAAV+ALSAAAVKAKLLA+QEEDQIRQL SLIEKQL K+E KL+FFNEM+ V+MRV+EQLDRS+Q+LYHER QIIAARLGLPASSSR MPP NR+A NFANS+ RPPMSM + RPP++RPMG++ PTPSN +VS T AGSSIRP QD LSSVG K Sbjct: 904 ATKAEDQKGSKRESADFKQNDDNSIDKVKRAAVSALSAAAVKAKLLANQEEDQIRQLAASLIEKQLRKLETKLAFFNEMDHVIMRVREQLDRSKQKLYHERAQIIAARLGLPASSSRGMPPQLPTNRIAMNFANSIPRPPMSMTSQRPPIARPMGTLAPTPSNTFVS-TTAGSSIRPSGQDKLSSVGMK 1091
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: W9R169_9ROSA (SWI/SNF complex subunit SWI3D OS=Morus notabilis GN=L484_026920 PE=4 SV=1) HSP 1 Score: 607.446 bits (1565), Expect = 0.000e+0 Identity = 420/827 (50.79%), Postives = 528/827 (63.85%), Query Frame = 2 Query: 116 MEEKRRDAGNS-PAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEER------------ILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAM-NDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRS---VANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITS--QVLPSTLEETGGK-GTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533 MEEKRRDAG S A S EP ++RRRAG QKRK+ +L S SSS PSKRATREKSS GPLTRARQ S + +L G A +L E+V A + E + ELEALE+ +EA+F+A+RSR ++AHVVP+HCGWFSW K H +EE LPSFFNGKS +RT D YLEIRN IMKKFH+NPS QIE KDL ++EVGDLDARQEVLEFLD+WGLINFHPFPP SAV ADGD DG AKK SL + L+HFE+ +S V+PK N++ P++PSG PESA+ ++L+R V+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN KF SGMSS+DFILMEPGE +GLSGGKWTDQETLLLLEALELYKENW+EIAEHVATKTKAQCILHF+QMPIED F + DD N+D+ SKE A PA+ D++ T E+Q+ T PMETSK ED K+V S++ S+ +VK +E K ++ + K G E E+C + A++EAFEAVGY LT E SFA+VGNP MALA F A LVGP++A AS+ +SLKSLSG P+I+LA R+CF+LEDPP D KEP S VAN ED SL ++K+ LS E+ E P+ KE +EE NL + S KD PS S + + ++ PS ++E+ GK G E ++ + +V+MS+ +KNEP + + + A+ +N++ S S KN++ I + + P++A+ DV + Sbjct: 1 MEEKRRDAGTSTSASGDSPATEPTSSRRRAGGQKRKSGNLGSSGSSSAPSKRATREKSSLSHPPIHN---GPLTRARQAPSSLSSSLASADGAPAASASGGAKPAAEQARVPGVLGGETVAAASVAEELRKESELEALESGLEAKFQAIRSRSNSAHVVPSHCGWFSWTKIHPIEERTLPSFFNGKSELRTADTYLEIRNWIMKKFHSNPSTQIELKDLSELEVGDLDARQEVLEFLDHWGLINFHPFPPTSSAVGGADGDGDGTAKKGSLADKLYHFEIPQSSMPVIPKNNVAAPAVPSGLFPESAIAEELVR-----VEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFDSGMSSTDFILMEPGEGAGLSGGKWTDQETLLLLEALELYKENWSEIAEHVATKTKAQCILHFVQMPIEDTFLDYDD-NMDSTSKENADPASTEKDQSVPKDAGEATKGETAASENQSPTSPMETSK-EDIKDVKASQDTSKPVEANEVKASQENSKRKEGSESKVGEETEEDCTIKALKEAFEAVGYPLTCEGSFSFAEVGNPAMALAAFLARLVGPDLATASAHNSLKSLSGNSPSIELAVRHCFLLEDPPNDNKEPAGLLSVDKVANGETQTDEIPCDKKEDSSL--EEKTCLSAPEGESQE-----------KPH----AAKEQEAVVASEEGDSVNLKKRSTSKIIKDQPPSTLGGSGELKAEGELPPSLVKESEGKSGQLPESTE---TLNDVEMSEPPPSEKNEPQQNVSLNFRSDSTHSAEDLKNVDAVSDSLPLEKNDKHGK--IVNSDGKPPSNAARDVDM 795 HSP 2 Score: 204.527 bits (519), Expect = 3.087e-50 Identity = 123/182 (67.58%), Postives = 146/182 (80.22%), Query Frame = 1 Query: 2965 EGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 +G + HD+ E +++ IDK+KRAA +A+SAAAVKAKLLA+QEEDQIR+L+ LIEKQL KME KL+FFNEME VVMRV+EQ+DRSRQRLYHER QIIAARLGLPASSSR MP NR+ N A SV RPP+SM + RPP+SRPMGS+ P+PS P T+AGSSI+P QD LSSVGTK Sbjct: 828 DGDKEKHDALETKEHK-IDKIKRAAASAISAAAVKAKLLANQEEDQIRRLSALLIEKQLQKMETKLAFFNEMENVVMRVREQMDRSRQRLYHERAQIIAARLGLPASSSRVMPSSLPGNRIGVNIAGSVTRPPLSMVSQRPPMSRPMGSVAPSPSIPL--PTLAGSSIQPPCQDKLSSVGTK 1006
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: B9RBE0_RICCO (Transcription regulatory protein SWI3, putative OS=Ricinus communis GN=RCOM_1674900 PE=4 SV=1) HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0 Identity = 416/844 (49.29%), Postives = 539/844 (63.86%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAG---PSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNF----ATNEEDKKANLNESSIINQSKDHQPSVTRVSNTIT--SQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLK-KNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVT 2614 ME+K ++ AG P+SAE +++RRRA QKRKAN+LS S++SSTPSKR TREK++ GPLTRARQ + G K+EE++ + +A + L + +LE L+ IEAEFE +RSRDSNAHVVP+HCGWFSW K H +EE LPSFFNGKS +RTPD+Y+EIRN I+K+FH NP+VQIE KDL +++V D+DA+QEVLEFLDYWGLINFHPFP DS A+ D G ++K+ LLE LFHFE I+ V+ + N+S+P++PSGF P+S++ D+L+R EGP+V+YHCNSCSADCSRKRYHCQ QAD+DLC DCFNN KFGS MSSSDFILMEP EA G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFF+C D ++D NSKET P A DET+ K+ ETTE KT AK TS ED EV +E + G++ V+ET K +D++ K EN AL A+ EAFE VGY T E++LSFA+VGNPVMALA F LVG ++A AS+QSSLKSL+ P +QLAAR+CF+LEDPPD D+K ++ E EE S N+ + K + N+ A++ E + L E + K+ Q S+ + +N I+ S+ PS+++ET T SQ + K+VDM ++L NEPC + AS + E S+ A+ SE+++ S S P + +Q+ VK G+ + P +A DV+++S + QPV S+ ENG T Sbjct: 1 MEDKPAGGSSATAGGDSPASAE-PTSSSRRRASGQKRKANALSTSNASSTPSKRLTREKAAISQIPVHNG--GPLTRARQSPNNLGSTAAGGGI----KVEEKVAAVTATEAATIAALEEEVSKLEELKGGIEAEFEVIRSRDSNAHVVPHHCGWFSWPKIHPLEERALPSFFNGKSKIRTPDIYMEIRNWIVKRFHLNPNVQIELKDLSELDVADVDAKQEVLEFLDYWGLINFHPFPQTDSP---ANADGGGRSEKELLLEKLFHFETIQPCLPVISRPNVSSPALPSGFFPDSSIADELVRPEGPAVEYHCNSCSADCSRKRYHCQTQADYDLCADCFNNGKFGSDMSSSDFILMEPAEAPGISGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFDCCD-DVDGNSKETTDPPANMDETSAPKDGMETTEDKTG----AKQDQTLTSSTEDANEVKVCQEIARPDNGSEAIIVEETSKSKDISEVKADQHMGENFALKALTEAFEGVGYPSTPENRLSFAEVGNPVMALAVFLGRLVGRDVAIASAQSSLKSLNSESPGMQLAARHCFLLEDPPD--------------------------------DKKGPAGIGCNKKIEAFAPEEKQPPDSSNEESNKKLNTVNYAGIAASHAEVEPGKLKEFNESESEKEPQMSILKETNEISSKSETPPSSVKETEQSLTTVH-SQLTEISKDVDMVSDLKLSDSNEPCQSIASVLIEEPSQAAEVSEDVDMVSHSLPQENIEQQQKVKTNSAGDHSHPTEAPKDVKMLSSLPSEAKEPQQQPVAPISLVENGET 796 HSP 2 Score: 221.861 bits (564), Expect = 8.839e-56 Identity = 126/182 (69.23%), Postives = 152/182 (83.52%), Query Frame = 1 Query: 2965 EGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 +GK + DS E +D+ +IDK+K AA++ALSAAAVKAKLLA+QEEDQIRQL SLIEKQLHK+E KLSFFNEM+ ++MRV+EQLD+SRQRLYHER QIIA RLG+P SSSRAMPP NR+A N ANS+ RPP++M + RPP+SRPMG++ P PSNP+VS T AG+SIRP QDNLSSV TK Sbjct: 803 DGKKEKPDSNEIKDDHNIDKIKSAAISALSAAAVKAKLLANQEEDQIRQLAASLIEKQLHKLETKLSFFNEMDHIIMRVREQLDKSRQRLYHERAQIIATRLGIPPSSSRAMPPTLPTNRIAMNIANSIPRPPVNMNSQRPPISRPMGALAPIPSNPFVS-TTAGNSIRPSGQDNLSSVVTK 983
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A059ANS0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01261 PE=4 SV=1) HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0 Identity = 371/705 (52.62%), Postives = 467/705 (66.24%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAE---LEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXX-XXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLN----------ESSIINQSKD 2188 MEE+RRDAG PAG ++AE + A+TRRRAG KRKA++L S SS PSKR TR+KSS +H N GPLTRARQG S + A G K EE+ +E ++AE+ ++ E LEA +RSR+++AHVVPNHCGWFSW K H +EE L SFFNGKS RT ++YLEIRN IMKKF ANP IE KDL D+EVGD++ARQEVLEFLDYWGLINFHPF DS D D G+AK+D ++E L+ FE + + P+ N + P MPSG ESA+ +DL++ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFN+ KFGSGMSSSDFILMEP E G++GG WTDQETLLLLEALELYKENW+EIAEHVATKTKAQCILHFLQMPI+D F +CDD ++D SKE ND+ ++++ T EDQ +T PM+ SK ED E E+ S + K ++ K ED V ++ EN AL A+REAFEA+GY T ES +SF +VGNPVMALAGF + LVG ++AAAS++SSLKS+SG P +QL R+CF+LEDPPD +E S+S+ +TG+ +N D+ K D S++ +E+ + + EN+ PS D+ KE +T ++ K +NLN ES I+ +S D Sbjct: 1 MEERRRDAGTLPAGAAAAEPQSADSASTRRRAGGHKRKASALGASGPSSAPSKRVTRDKSSISHAHQIHN--GPLTRARQGPASASSAAPAGGLAAV-KSEEKKAAQEVLEAEEARRASERWEALEAAIEADFEA---IRSRNADAHVVPNHCGWFSWTKVHPLEERALASFFNGKSQSRTHNMYLEIRNKIMKKFRANPKSLIELKDLEDLEVGDVEARQEVLEFLDYWGLINFHPFLQSDSP--KTDADVIGVAKEDPMIEKLYRFEATQPCLPIAPRNNQAAPPMPSGLFSESAIFEDLVKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNSGKFGSGMSSSDFILMEPAELHGVTGGNWTDQETLLLLEALELYKENWSEIAEHVATKTKAQCILHFLQMPIQDAFLDCDD-DVDATSKENTDLTTTNDDAPISRDTPERTEGKTDPVEDQPQTSPMDISKAEDTHEGKVDEKTSSQEEANKSKVAQDIPKLEDAEVKVKDIK--ENLALKALREAFEALGYFSTPESSVSFGEVGNPVMALAGFLSRLVGSDVAAASARSSLKSVSGNSPGLQLVMRHCFILEDPPDHEELAGSQSLVKETGDVIPEN---GTDKEQKEDIIPSIT--SEEDLNIGEKCENSDHPSAGDIVEAAKELD--STVQQLKHSNLNVGSSDLLKNSESGIMKESND 687 HSP 2 Score: 155.221 bits (391), Expect = 9.250e-35 Identity = 101/169 (59.76%), Postives = 123/169 (72.78%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAG 3459 D++++GK + + + D S+DKLKRAA +ALSAAAVKAKLLAD E DQIR L L EKQLHK+E KL+F+NE+E V MRV+EQL+R+RQRLYHER QIIAARLG SSSR P ANR+ N AN R P SM + RPPL RP G++ P PSNP+VS + AG Sbjct: 814 DQLKDGKGDHERAATKYD--SMDKLKRAAASALSAAAVKAKLLADHELDQIRHLALLLAEKQLHKVEMKLAFYNEVENVTMRVREQLERARQRLYHERAQIIAARLGYSGSSSRPNPATLPANRIPMNMANLAPRAPTSMPSQRPPLLRPPGNVAPNPSNPFVSTSTAG 980
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A072UM37_MEDTR (SWI/SNF complex subunit SWI3D OS=Medicago truncatula GN=MTR_4g069830 PE=4 SV=1) HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0 Identity = 386/828 (46.62%), Postives = 510/828 (61.59%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQ----------XXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPM-ETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTC-----SRSVANDTGNRGAQNVKHSEDESLKGD-QKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDH-QPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533 MEEKR P+ + EP +RRRAG KRK+ SL+ S+S+ST SKR TREK+S L N GPLTRARQ + +G A + + + ++ E +K ++ E + +E +A +RSRD+NAHVVP HCGWFSW H +E+ ++PSFFNG S RTPD Y+EIRN IMKKFH+NP++QIE KDL ++++GD DARQE++EFLDYWGLINFHPFP DSAV S GD DG A+K+SLLE L+HFE ++S P V K L TP+M SG PE A+ ++L++ EGP+V+ YHCNSCS DCSRKRYHCQKQADFDLCTDCFNNRKFG+GMS DFILMEP EA+G+S GKWTDQETLLLLEALELYKENW EIAEHV TK+KAQCILHF+QMPIED F +CDD ++D SKETA PAA N+ + ++ ++ + K ETS+ ED K EE + + G+D K + T K ED N K G E ++C L A++EAF AVGY+ E SFA+VGNPVMALA F A LVG ++A AS+ + +KSLSG P+ ++A+R CFVLEDPPD+K+ T S+S + T Q+ D+ L+ D QK+ ++ E+ + S P + + E+ N N E N N+ SI D Q ++ S + T +P + EE + + +EP P + KE +SDS +KNE + S EL +PA+ ++ + S S PS + QK + ES + D++ DV + Sbjct: 1 MEEKR-----PPSTVDTPAPEPTPSRRRAGGNKRKSGSLNASNSASTSSKRITREKASPLHHPPPHN--GPLTRARQIPNNSSAAANSSTAGGSASAPAAVKHAPQTQALVVAAEQLKKKESEWESMEAEIEAEFKA--------IRSRDANAHVVPTHCGWFSWSDIHSIEKRMMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNIQIELKDLSELDIGDSDARQEIMEFLDYWGLINFHPFPSTDSAVAST-GD-DGEAEKNSLLEKLYHFETLQSCPPAVQKTGLITPAMTSGLFPEPAIAEELVKQEGPAVEMLEYHCNSCSGDCSRKRYHCQKQADFDLCTDCFNNRKFGTGMSPLDFILMEPAEAAGVSSGKWTDQETLLLLEALELYKENWTEIAEHVGTKSKAQCILHFVQMPIEDAFVDCDD-DVDAGSKETADPAATNNNLPMDEDKAKDASEVIENDISDSIKGHDETSQAEDVKVKDNQEETPKLQDGSDEKTSEGTPKLEDDNKVKLGEEVGDDCVLNALKEAFAAVGYSPEPEGPSSFAEVGNPVMALAAFLAQLVGSDLAVASAHNYIKSLSGNAPSTEIASRCCFVLEDPPDDKKDTATSERDSKSEGDQTDKNVQQDAAMLNDKDLEKDHQKTKIASDASEDKIHQASTDGGISEKP---ISSEGEAMN---NHESGLDNCNDPSISKAPNDQAQGTLHNSSGSTTKAEIPPSSEEVQERTSNEEPGHPIEEQKEGSVSDSHPSEKNEIQQSIKSNLPVELPKPAETPKSDDMVSDSMPSDTNKPQKQLSTNAVSESQKTTDSAMDVDV 804 HSP 2 Score: 181.415 bits (459), Expect = 6.345e-43 Identity = 88/142 (61.97%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 +QEEDQIR+LT++LIEKQLHK+E KL+FFN+ME +VMRVKE LDRSR +LYHER II++RLG+PASSSR +PP NR+ NFANS+ RP +M P +SRP + T NP +S T AGSS+RP SQ+NLSSVGT+ Sbjct: 898 NQEEDQIRELTSALIEKQLHKLETKLAFFNDMEHLVMRVKELLDRSRHKLYHERAMIISSRLGVPASSSRGVPPSIPTNRIPMNFANSLQRPQFNMNPQGPLISRPGSTAATTLPNPLMSATAAGSSVRPSSQENLSSVGTE 1039
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: G7JG42_MEDTR (SWI/SNF complex subunit SWI3D OS=Medicago truncatula GN=MTR_4g069830 PE=4 SV=1) HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0 Identity = 386/828 (46.62%), Postives = 510/828 (61.59%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQ----------XXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPM-ETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTC-----SRSVANDTGNRGAQNVKHSEDESLKGD-QKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDH-QPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533 MEEKR P+ + EP +RRRAG KRK+ SL+ S+S+ST SKR TREK+S L N GPLTRARQ + +G A + + + ++ E +K ++ E + +E +A +RSRD+NAHVVP HCGWFSW H +E+ ++PSFFNG S RTPD Y+EIRN IMKKFH+NP++QIE KDL ++++GD DARQE++EFLDYWGLINFHPFP DSAV S GD DG A+K+SLLE L+HFE ++S P V K L TP+M SG PE A+ ++L++ EGP+V+ YHCNSCS DCSRKRYHCQKQADFDLCTDCFNNRKFG+GMS DFILMEP EA+G+S GKWTDQETLLLLEALELYKENW EIAEHV TK+KAQCILHF+QMPIED F +CDD ++D SKETA PAA N+ + ++ ++ + K ETS+ ED K EE + + G+D K + T K ED N K G E ++C L A++EAF AVGY+ E SFA+VGNPVMALA F A LVG ++A AS+ + +KSLSG P+ ++A+R CFVLEDPPD+K+ T S+S + T Q+ D+ L+ D QK+ ++ E+ + S P + + E+ N N E N N+ SI D Q ++ S + T +P + EE + + +EP P + KE +SDS +KNE + S EL +PA+ ++ + S S PS + QK + ES + D++ DV + Sbjct: 1 MEEKR-----PPSTVDTPAPEPTPSRRRAGGNKRKSGSLNASNSASTSSKRITREKASPLHHPPPHN--GPLTRARQIPNNSSAAANSSTAGGSASAPAAVKHAPQTQALVVAAEQLKKKESEWESMEAEIEAEFKA--------IRSRDANAHVVPTHCGWFSWSDIHSIEKRMMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNIQIELKDLSELDIGDSDARQEIMEFLDYWGLINFHPFPSTDSAVAST-GD-DGEAEKNSLLEKLYHFETLQSCPPAVQKTGLITPAMTSGLFPEPAIAEELVKQEGPAVEMLEYHCNSCSGDCSRKRYHCQKQADFDLCTDCFNNRKFGTGMSPLDFILMEPAEAAGVSSGKWTDQETLLLLEALELYKENWTEIAEHVGTKSKAQCILHFVQMPIEDAFVDCDD-DVDAGSKETADPAATNNNLPMDEDKAKDASEVIENDISDSIKGHDETSQAEDVKVKDNQEETPKLQDGSDEKTSEGTPKLEDDNKVKLGEEVGDDCVLNALKEAFAAVGYSPEPEGPSSFAEVGNPVMALAAFLAQLVGSDLAVASAHNYIKSLSGNAPSTEIASRCCFVLEDPPDDKKDTATSERDSKSEGDQTDKNVQQDAAMLNDKDLEKDHQKTKIASDASEDKIHQASTDGGISEKP---ISSEGEAMN---NHESGLDNCNDPSISKAPNDQAQGTLHNSSGSTTKAEIPPSSEEVQERTSNEEPGHPIEEQKEGSVSDSHPSEKNEIQQSIKSNLPVELPKPAETPKSDDMVSDSMPSDTNKPQKQLSTNAVSESQKTTDSAMDVDV 804 HSP 2 Score: 181.8 bits (460), Expect = 6.111e-43 Identity = 111/194 (57.22%), Postives = 143/194 (73.71%), Query Frame = 1 Query: 2929 GCILLFFADKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 G I D G +D ++ + +SS +K+KRAAV+ L+AAAVKAK+LA+QEEDQIR+LT++LIEKQLHK+E KL+FFN+ME +VMRVKE LDRSR +LYHER II++RLG+PASSSR +PP NR+ NFANS+ RP +M P +SRP + T NP +S T AGSS+RP SQ+NLSSVGT+ Sbjct: 848 GAIAGAVEDCAGNGMEVKNDGSKTKQDSSFEKVKRAAVSTLAAAAVKAKVLANQEEDQIRELTSALIEKQLHKLETKLAFFNDMEHLVMRVKELLDRSRHKLYHERAMIISSRLGVPASSSRGVPPSIPTNRIPMNFANSLQRPQFNMNPQGPLISRPGSTAATTLPNPLMSATAAGSSVRPSSQENLSSVGTE 1041
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: V4SCB4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027804mg PE=4 SV=1) HSP 1 Score: 541.576 bits (1394), Expect = 1.374e-168 Identity = 337/619 (54.44%), Postives = 434/619 (70.11%), Query Frame = 2 Query: 662 LEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGD------CDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXD-QAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES----TNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVD-MSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKN 2458 +EIRN IMKKFH+NP QIE KDL ++EVG LDARQEV+EFLDYWGLINFHPFP +S+V ++DGD D AKK SLLE L+ FE I++ P V P +++ P++PSG PESA+ ++L +LEGP+V+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN KFGS MSSSDFILM PGEA+G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED+F +CDD ++D N KET A N +T+ +K+V+E +ESKT + Q +T PMETSKPED E+ E+ S+ K +DVK ++ LK ED + K G E EN AL A+REAFEAVGY T E+ SFA+VGNPVMALA F A L GP++ AS++SSLKS+SG P +QLAA++CF+LEDPP D+KE S S+ + +R Q + ED ++K D++ + HGD+ E S+ EE + S N+ ++K N T E+D+ +LNE S KD+QPS+ SN + S+VL S+ +E+ G+G++ EP+ P K+ +SDS+ KNEP S V E S P+ +++++ S P S+N Sbjct: 1 MEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFPHVESSVANSDGDRMTDADSDAAAKKGSLLEKLYRFEEIKAGPPVAPMPSITFPAVPSGLFPESAIAEELAKLEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDD-DVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQSFAEVGNPVMALAAFLALLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKEVARSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKES-GEGSSGEPAPPVDVEKDNSLLSDSLPSGKNEPDQPFISNSVAEPSPPSKLTKDVDMVS-DPQPSEN 616 HSP 2 Score: 202.601 bits (514), Expect = 4.449e-50 Identity = 128/186 (68.82%), Postives = 144/186 (77.42%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D+ +G+ + HDS E +++ IDKLK AAVTALSAAAVKAKLLA QEEDQIRQL TSLIEKQL K+EAKL+FFNEM+ V MRV+EQL+RSRQRLY ER II ARLG SR M P ANR FANSVARPPMSM +PRPP+SRPM + TPSNP+ S T AGSSIRP SQDNLSSVG K Sbjct: 670 DQNRDGQDEKHDSKETKNDQYIDKLKHAAVTALSAAAVKAKLLACQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQERALIIQARLG----PSRVMQPSVPANRNPMTFANSVARPPMSMTSPRPPISRPMVPQSSTPSNPFGSTTTAGSSIRPSSQDNLSSVGMK 851 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 24
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BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092725 ID=g.barbadense_cottongen_reftransV1_0092725; Name=g.barbadense_cottongen_reftransV1_0092725; organism=Gossypium barbadense; type=contig; length=4555bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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