g.barbadense_cottongen_reftransV1_0092725, g.barbadense_cottongen_reftransV1_0092725 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3D_ARATH (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=3) HSP 1 Score: 480.715 bits (1236), Expect = 2.020e-146 Identity = 367/798 (45.99%), Postives = 485/798 (60.78%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATT-----RRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSE----TKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPD-EKEPTCSRSVANDT-GNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSI-----INQSKDHQPSVTRVSNTITSQVLPST-------LEETGGKG-----------------TAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGE 2389 MEEKRRD+ + A S+ PA+ RRR G KRKAN+L GS+ S+ + + +++ S HNGPLTRARQ A ++ + + K ++ EE NKA E EALEAKIEA+FEA+RSRDSN HVVPNHCGWFSW+K H +EE LPSFFNGK RT +VY EIRN IM KFH+NP++QIE KDL ++EVGD +A+QEV+EFLDYWGLINFHPFPP D+ ++D D + K+SLL +L+ F+V E+ P +V K + + PSG P+ D+LL+ EGP+V+YHCNSCSADCSRKRYHC KQADFDLCT+CFN+ KF S MSSSDFILMEP EA G+ GKWTDQETLLLLEALE++KENWNEIAEHVATKTKAQC+LHFLQMPIED F + D D SK+T A D+ +V K+ E E+K ++ K E +PED E S+E S+ ++ +++ ++T K E + EA EN AL A+ EAFE VG++ T E+ SFAD+GNPVM LA F L G ++A AS+++S+KSL + LA R+C++LEDPPD +K+PT S+S + D GN +D S K DQ S + EVSL ++ P TD + T + +EE + + E+S + + + +P T S + PS L+E G +A + SQ P+A ++V+M D++Q +K+ P D K VGE Sbjct: 1 MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLTREKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKS----EVLNVAVGADGEKPKEEEERNKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHD--DLGDKESLLNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYK-DPISKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMK--EVPEPEDGNEEKVSQESSKPGDASEETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNS-GMLLATRHCYILEDPPDNKKDPTKSKSCSADAEGN---------DDNSHKDDQPEEKSKKAE---EVSLNSDDREMPD-----TDTGKETQDSVSEEKQPGSRTENSTTKLDAVQEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQSTVSQSAADASQ-PEASRDVEMKDTLQSEKD-PEDVV--KTVGE 767 HSP 2 Score: 140.969 bits (354), Expect = 2.764e-32 Identity = 86/140 (61.43%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 3088 QEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPAS-SSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSI-RPGSQDNLSSV 3501 QEEDQIRQL+ SLIEKQLHK+EAKLS FNE E + MRV+EQL+RSRQRLYHER QIIAARLG+P S SS+A P NR+A NFAN RPPM M PR P P P + + T+ GSS PGS DN+SSV Sbjct: 852 QEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQRLYHERAQIIAARLGVPPSMSSKASLP---TNRIAANFANVAQRPPMGMAFPR--PPMPRPPGFPVPGSFVAATTMTGSSDPSPGS-DNVSSV 985
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3C_ARATH (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.383e-42 Identity = 110/285 (38.60%), Postives = 161/285 (56.49%), Query Frame = 2 Query: 542 AHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVG-DLDARQEVLEFLDYWGLINF------HPFPPGDSAVVSAD--GDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASG-LSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFN 1366 HV+P H WF+ +E ++P FF+GKSP TP+ Y+E RN+I+ K+ NP + D + G D++ V FLD+WG+IN+ HP P D + V D G+ + + + +++L F+ +P+ K S+PS +S LD +R+ D HCN CS + QK+ D LC DCF++ +F G S DF+ ++P + G G WTDQETLLLLEA+ELY ENW +IA+HV +K+KAQCILHFL++P+ED + Sbjct: 175 VHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSIDSLIKFD----KPNCRHKGGEVYSSLPS-LDGDSPDLD--IRIREHLCDSHCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLD 452 HSP 2 Score: 60.4622 bits (145), Expect = 1.352e-7 Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSS 3291 D EE +I++L+ +++ QL +ME KL F E+E ++M+ EQ++++RQR ER ++++AR G P S Sbjct: 599 DHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAERARMLSARFGSPGGIS 667
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SSR2_SCHPO (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 2.909e-29 Identity = 95/286 (33.22%), Postives = 145/286 (50.70%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSA--VVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEG-------------PSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVF 1360 +VP++ GWF K H +E P FFNGKSP++TP +Y + R+ ++ + P+ + VGD+ A V FL+ WGLIN+ P A + G I+ + + E++ P P + S L E L +E P VD C +C +CS+ YH K +D+C +C+ +F S +SSDF+ M+ + + W++QETLLLLEA+E Y ++WN+IA HV ++TK QC++HFLQ+PIED + Sbjct: 19 IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVTACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPPISGHVQAISNTPIVTQ-----EMLAQHPP--PSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVDKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPY 297
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3B_ARATH (SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.493e-23 Identity = 83/280 (29.64%), Postives = 131/280 (46.79%), Query Frame = 2 Query: 539 NAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDN 1378 N HV P++ WFSW + E LP FF+ +S + P YL +RNSI+K++ + +I D+ V D+ + + V +FLD WGLIN++ S +E E+ S A S P+ + E+A +CN C A CS + C K D LC C+ + G++SS+F +E E S +W+D+E LLLLEA+ Y ++W ++A HV +T+ C+ F+++P + F D+ Sbjct: 47 NIHV-PSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSIRRVFDFLDSWGLINYNS----------------------SASAKPLKWEEKEAGKSAGDAA-----SEPATTVKETA-------------KRNCNGCKAICSIACFACDKY-DLTLCARCYVRSNYRVGINSSEFKRVEISEE---SKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDS 281
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC1_HUMAN (SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 2.620e-23 Identity = 82/286 (28.67%), Postives = 136/286 (47.55%), Query Frame = 2 Query: 527 SRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNI 1384 + +N ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGL+N+ P + HF V+ PS + +L +P +P+ +L+ + + VD +F L TD ++ + +S +G +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + D ++ Sbjct: 443 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTP--------------HFNVLADTPSGLVPLHLRSPQVPAA----QQMLNFPEKNKEKPVDLQ-------------------NFGLRTDIYSKKTLAKSKGAS-------------AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASL 678
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC1_MOUSE (SWI/SNF complex subunit SMARCC1 OS=Mus musculus GN=Smarcc1 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.678e-23 Identity = 85/298 (28.52%), Postives = 139/298 (46.64%), Query Frame = 2 Query: 527 SRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAA 1420 + +N ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGL+N+ P + HF V+ PS + +L +P +P+ +L+ + + +D +F L TD ++ + +S +G +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + NS + GP A Sbjct: 442 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTP--------------HFNVLADTPSGLVPLHLRSPQVPAA----QQMLNFPEKNKEKPIDLQ-------------------NFGLRTDIYSKKTLAKSKGAS-------------AGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE--------NSDASLGPLA 681
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: RSC8_YEAST (Chromatin structure-remodeling complex protein RSC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSC8 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.224e-22 Identity = 89/291 (30.58%), Postives = 136/291 (46.74%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVV--SADGDCDGI-----AKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLD---DLLRLEGPSVD-------YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQ-CILHFLQMPIEDVFF 1363 ++P+ WF K H +E+ P FFN S +TP Y + RN I+ + +P + + D+ + ++ FL+ WGLIN+ P +++ S G + K L EN+ EV E P+ P + V D D L+ S + Y C++C + RYH + D +LC+ CF FG+ SSDFI + E +G S K W+DQE LLLLE +E+Y++ W +IA+HV + + CI FL +PIED + Sbjct: 81 IIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTITAVRRNVAMDVASIVKIHAFLEKWGLINYQIDPRTKPSLIGPSFTGHFQVVLDTPQGLKPFLPENVIKQEV-EGGDGAEPQVK---KEFPVNLTIKKNVYDSAQDFNALQDESRNSRQIHKVYICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRL---ENNGNSVKKNWSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYI 364
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC2_MOUSE (SWI/SNF complex subunit SMARCC2 OS=Mus musculus GN=Smarcc2 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.174e-22 Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFF 1363 ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGLIN+ V A+ + + HF V+ PSG +P L+ + P + + +F L TD + + S +A+ + +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ---------VDAESRPTPMGPPPT-----SHFHVLA--------------DTPSGLVP--------LQPKPPQQSSASQQMLNFPEKGKEKPADMQNFGLRTDMYTKKNVPSK-----------SKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL 649
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SMRC2_HUMAN (SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.258e-22 Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFF 1363 ++P++ WF + H +E LP FFNGK+ +TP++YL RN ++ + NP + S GD+ A V FL+ WGLIN+ V A+ + + HF V+ PSG +P L+ + P + + +F L TD + + S +A+ + +WT+QETLLLLEALE+YK++WN+++EHV ++T+ +CILHFL++PIED + Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ---------VDAESRPTPMGPPPT-----SHFHVLA--------------DTPSGLVP--------LQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSK-----------SKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL 649
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3A_ARATH (SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana GN=SWI3A PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.473e-19 Identity = 78/279 (27.96%), Postives = 122/279 (43.73%), Query Frame = 2 Query: 545 HVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSAD------GDCDGI---AKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFL--PESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPI 1348 + +P WF W H +E FF S RTP VY E R+ I+ KF + ++ + VGD++ Q+V FL+ WGLINF + ++S D G GI A +SL RP P L + +G P ++ D L+ P C C C Y K ++C CF N +G ++ DF L+ + WT++E LLLLE++ + ++W I++ V+TK++ CI +++P Sbjct: 13 YTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIEQGTPAGIRVTATPNSL------------RPITAPP--LVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCGERCDSPFYQHNK-GIVNICEKCFKNGNYGENNTADDFKLI-----GNSAAAVWTEEEILLLLESVLKHGDDWELISQSVSTKSRLDCISKLIELPF 271
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2V5P2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G152400 PE=4 SV=1) HSP 1 Score: 1284.24 bits (3322), Expect = 0.000e+0 Identity = 741/853 (86.87%), Postives = 770/853 (90.27%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVS--ADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTTGFSLFFYKYLVRKWKPH 2668 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKLEE LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTPD Y EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFPP SAV + DGD DG+ +KDSLLENLFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTV K+VSETTESKTTQEDQA+T PMETSKPEDEKEV GSEEPSETKTGTD KGVKETLKPEDMNV KDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+SVANDTGNRGAQNVKHS DESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES+NFATNEEDKKANLNESSIINQSKDHQPSVTRVSN +TSQVLPS+LEETGGK TAKEPSQPPKAVKEVDMS SVQLKKNEPCDAAASKPVGELSEPA+ASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTTGFSLFFYKYLVRKWKPH Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLEETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWTKIHHLEESILPSFFNGKSPNRTPDAYKEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPPAGSAVPNPNGDGDGDGMTEKDSLLENLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVPKDVSETTESKTTQEDQAQTTPMETSKPEDEKEVRGSEEPSETKTGTDAKGVKETLKPEDMNVRKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKSVANDTGNRGAQNVKHSGDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESSNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNNLTSQVLPSSLEETGGKETAKEPSQPPKAVKEVDMSGSVQLKKNEPCDAAASKPVGELSEPANASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTTGFSLFFYKYLVRKWKPH 845
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2VZQ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G152400 PE=4 SV=1) HSP 1 Score: 1247.65 bits (3227), Expect = 0.000e+0 Identity = 724/836 (86.60%), Postives = 753/836 (90.07%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVS--ADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKLEE LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTPD Y EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFPP SAV + DGD DG+ +KDSLLENLFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTV K+VSETTESKTTQEDQA+T PMETSKPEDEKEV GSEEPSETKTGTD KGVKETLKPEDMNV KDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+SVANDTGNRGAQNVKHS DESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES+NFATNEEDKKANLNESSIINQSKDHQPSVTRVSN +TSQVLPS+LEETGGK TAKEPSQPPKAVKEVDMS SVQLKKNEPCDAAASKPVGELSEPA+ASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTT Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLEETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWTKIHHLEESILPSFFNGKSPNRTPDAYKEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPPAGSAVPNPNGDGDGDGMTEKDSLLENLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVPKDVSETTESKTTQEDQAQTTPMETSKPEDEKEVRGSEEPSETKTGTDAKGVKETLKPEDMNVRKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKSVANDTGNRGAQNVKHSGDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESSNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNNLTSQVLPSSLEETGGKETAKEPSQPPKAVKEVDMSGSVQLKKNEPCDAAASKPVGELSEPANASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTT 828 HSP 2 Score: 333.954 bits (855), Expect = 1.562e-92 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 DKIEEGKSKNHDSTEREDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK Sbjct: 829 DKIEEGKSKNHDSTEREDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 1014
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2V6W7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G152400 PE=4 SV=1) HSP 1 Score: 1244.18 bits (3218), Expect = 0.000e+0 Identity = 725/837 (86.62%), Postives = 754/837 (90.08%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVS--ADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTTG 2620 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKLEE LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTPD Y EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFPP SAV + DGD DG+ +KDSLLENLFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTV K+VSETTESKTTQEDQA+T PMETSKPEDEKEV GSEEPSETKTGTD KGVKETLKPEDMNV KDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+SVANDTGNRGAQNVKHS DESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES+NFATNEEDKKANLNESSIINQSKDHQPSVTRVSN +TSQVLPS+LEETGGK TAKEPSQPPKAVKEVDMS SVQLKKNEPCDAAASKPVGELSEPA+ASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTTG Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLEETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWTKIHHLEESILPSFFNGKSPNRTPDAYKEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPPAGSAVPNPNGDGDGDGMTEKDSLLENLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVPKDVSETTESKTTQEDQAQTTPMETSKPEDEKEVRGSEEPSETKTGTDAKGVKETLKPEDMNVRKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKSVANDTGNRGAQNVKHSGDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESSNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNNLTSQVLPSSLEETGGKETAKEPSQPPKAVKEVDMSGSVQLKKNEPCDAAASKPVGELSEPANASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTTG 829
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2S3J9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G152400 PE=4 SV=1) HSP 1 Score: 1243.8 bits (3217), Expect = 0.000e+0 Identity = 724/836 (86.60%), Postives = 753/836 (90.07%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVS--ADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKLEE LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTPD Y EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFPP SAV + DGD DG+ +KDSLLENLFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTV K+VSETTESKTTQEDQA+T PMETSKPEDEKEV GSEEPSETKTGTD KGVKETLKPEDMNV KDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+SVANDTGNRGAQNVKHS DESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES+NFATNEEDKKANLNESSIINQSKDHQPSVTRVSN +TSQVLPS+LEETGGK TAKEPSQPPKAVKEVDMS SVQLKKNEPCDAAASKPVGELSEPA+ASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTT Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLEETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWTKIHHLEESILPSFFNGKSPNRTPDAYKEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPPAGSAVPNPNGDGDGDGMTEKDSLLENLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVPKDVSETTESKTTQEDQAQTTPMETSKPEDEKEVRGSEEPSETKTGTDAKGVKETLKPEDMNVRKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKSVANDTGNRGAQNVKHSGDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESSNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNNLTSQVLPSSLEETGGKETAKEPSQPPKAVKEVDMSGSVQLKKNEPCDAAASKPVGELSEPANASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLVSVSQPSERSEPPQPVTSNSVNENGVTT 828 HSP 2 Score: 78.9518 bits (193), Expect = 2.599e-11 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQL 3141 DKIEEGKSKNHDSTEREDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQ+ Sbjct: 829 DKIEEGKSKNHDSTEREDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQV 891
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0B0MJQ1_GOSAR (SWI/SNF complex subunit SWI3D-like protein OS=Gossypium arboreum GN=F383_19306 PE=4 SV=1) HSP 1 Score: 1232.24 bits (3187), Expect = 0.000e+0 Identity = 715/838 (85.32%), Postives = 753/838 (89.86%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDG----IAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKL+E LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTP Y+EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFP SAV + +GD DG + +KDSLLE LFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAK+VSETTESKTTQEDQAKT PMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPE+MNVPKDGLEATENCALTA+REAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPN AAAS+QSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+SVANDTGNRGAQNVKHSEDESLKGDQK S+S+HGDENTEVSLREENATSPSPNDLTTDKKES+NFATNEEDKKANLNESSIINQSKDHQPSVTRVSN ITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKP PDGESTEPA+AS+DVQ+VSV+QPSER EPPQPV+SNSVNENGV T Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLQETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWNKIHHLEESILPSFFNGKSPNRTPAAYMEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPLAGSAVPNPNGDGDGDGDGMTEKDSLLEKLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAKDVSETTESKTTQEDQAKTTPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEEMNVPKDGLEATENCALTALREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNFAAASAQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKSVANDTGNRGAQNVKHSEDESLKGDQKISMSNHGDENTEVSLREENATSPSPNDLTTDKKESSNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNNITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPSPDGESTEPAEASNDVQMVSVAQPSERREPPQPVSSNSVNENGVMT 830 HSP 2 Score: 327.405 bits (838), Expect = 2.347e-90 Identity = 183/186 (98.39%), Postives = 183/186 (98.39%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 DKIEEGKSKNHDSTE EDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVS VAGSSIRPGSQDNLSSVGTK Sbjct: 831 DKIEEGKSKNHDSTETEDNSSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSTKVAGSSIRPGSQDNLSSVGTK 1016
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2RKZ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G242600 PE=4 SV=1) HSP 1 Score: 1109.36 bits (2868), Expect = 0.000e+0 Identity = 686/850 (80.71%), Postives = 741/850 (87.18%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXX-------DQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGT-AKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANSLSGSSSSSTPSKRATREKSSNLISHSSINHNGPLTRARQGAPSGNLALGLGSGFGGAKLEERILVKESVKAEDLEELNKASEELEALEAKIEAEFEAVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFN DD NIDTNSKET+ PA + DET+V K+VSE TE+KTT + DQ +T P++ SKPEDEKE SEE S+ +TGTD+K ET KPE+M+ KDG + ENCA+ A+REAFEAVGYNLTSES LSFADVGNP+MALAGFFA L GP I AAS+Q+SLK+LSG+ PNIQLAARNCF+LEDPPD+ KE T S SV ND GN+ AQNV++SE++SLK DQKSS S+H D+N E SL EE TS SPN L+TDKKE AT++E KKA NQSKDH+P V R S+ + SQV PS+ EETGGK T A+E SQ + VKEV+MS+SV L+KNEP DAAAS+PV ELSEP +A +N+ET S SPS +KNEQ+ VK GE ++P AS+D+++VS SQPSERSEP QPVTSNSVNENG T Sbjct: 1 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANSLSGSSSSSTPSKRATREKSSNLISHSSINHNGPLTRARQGAPSGNLALGLGSGFGGAKLEERILVKESVKAEDLEELNKASEELEALEAKIEAEFEAVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNSDD-NIDTNSKETSAPAVVTDETSVPKDVSEATETKTTSQEDQVPQEDQTQTTPVDASKPEDEKEKRESEEMSKPETGTDIKCAPETSKPEEMDEAKDGQDTKENCAIMALREAFEAVGYNLTSESTLSFADVGNPIMALAGFFARLAGPKIGAASAQASLKALSGSSPNIQLAARNCFLLEDPPDDKKEQTGSESVVNDVGNQDAQNVENSENKSLKEDKSTPVLDQKSSSSNHADQNAETSLPEEKVTSASPNCLSTDKKEPGTSATSKEAKKA--------NQSKDHEPGVMRGSDNLASQVPPSSAEETGGKETSAQESSQRTEVVKEVEMSESVPLEKNEPSDAAASEPVAELSEPTEALKNVETVSGSPSGAKNEQQPVKSSSGGEISQPTKASNDIEMVSDSQPSERSEPQQPVTSNSVNENGTIT 841 HSP 2 Score: 266.929 bits (681), Expect = 5.180e-70 Identity = 153/188 (81.38%), Postives = 167/188 (88.83%), Query Frame = 1 Query: 2947 FADKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D I+EGKS++H STE +D+SSIDK+KRAAVTALSAAAVKAKLLADQEEDQIR+LTTSLIEKQ KMEAKL FFNEMEG++MRVKEQLDRSRQ+LYHERTQIIAARLGLPASSSRAMPP N ANR+ATN+ANSVARPPM A RPP+SRPMG M PT SNP+VS TVAGSSIR SQDNLSSV TK Sbjct: 840 ITDVIKEGKSESHTSTETKDDSSIDKVKRAAVTALSAAAVKAKLLADQEEDQIRKLTTSLIEKQFSKMEAKLGFFNEMEGLMMRVKEQLDRSRQKLYHERTQIIAARLGLPASSSRAMPPANTANRIATNYANSVARPPMRTTAARPPMSRPMGPMAPTSSNPFVSTTVAGSSIRRASQDNLSSVRTK 1027
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0B0NXU7_GOSAR (SWI/SNF complex subunit SWI3D-like protein OS=Gossypium arboreum GN=F383_21812 PE=4 SV=1) HSP 1 Score: 1102.43 bits (2850), Expect = 0.000e+0 Identity = 683/850 (80.35%), Postives = 740/850 (87.06%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXX-------DQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGT-AKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDAGNSPAGPSSAELEPATTRRR GAQKRKANSLSGSSSSSTPSKRATREKSSNLISHSSINHNGPLTRARQGAPSGNLALGLGSGFGGAKLEERILVKESVKAEDLEELNKASEELEALEAKIEAEFEA+RSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSV+IESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFN DD NIDTNSKET+ PA + DET+V K+VSE TE+KTT + DQ +T P++ SKPEDEKE SEE S+ KTGTD+K ET KPE+ + KDG + ENCA+ A+REAFEAVGYNLTSES LSFADVGNPVMALAGFFA L GP I AAS+Q+SLK+LSG+ PNIQLAARNCF+LEDPPD+ KE T S SV ND GN+ AQNV++SE++SLK DQKSS S+H D+N E SL EE TS SPN L+TDKKE AT++E KKA +QSKDH+P V R S+ + SQV S+ EET GK T A+E SQ + VKEV+MS+SV L+KNEP DAAAS+PV ELSEPA+AS+N+ET S SPSR+KNEQ+ VK GE ++P AS+D+++VS SQPSERSE QPVTSNSVNENG +T Sbjct: 1 MEEKRRDAGNSPAGPSSAELEPATTRRRVGAQKRKANSLSGSSSSSTPSKRATREKSSNLISHSSINHNGPLTRARQGAPSGNLALGLGSGFGGAKLEERILVKESVKAEDLEELNKASEELEALEAKIEAEFEALRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVKIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNSDD-NIDTNSKETSAPAVVTDETSVPKDVSEATETKTTSQEDQVPQEDQTQTTPVDASKPEDEKEKRESEEMSKPKTGTDIKCAPETSKPEETDEAKDGEDTKENCAIMALREAFEAVGYNLTSESTLSFADVGNPVMALAGFFARLAGPKIGAASAQTSLKALSGSSPNIQLAARNCFLLEDPPDDKKEQTGSESVVNDAGNQDAQNVENSENKSLKEDKSTPVLDQKSSSSNHADQNAETSLPEEKVTSASPNCLSTDKKEPGTCATSKEAKKA--------SQSKDHEPGVMRGSDNLASQVPASSAEETWGKETSAQESSQRTEVVKEVEMSESVPLEKNEPADAAASEPVAELSEPAEASKNVETVSGSPSRAKNEQQPVKSSSGGELSQPTKASNDIEMVSDSQPSERSELQQPVTSNSVNENGTST 841 HSP 2 Score: 267.7 bits (683), Expect = 2.701e-70 Identity = 153/186 (82.26%), Postives = 165/186 (88.71%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D I EGKS++H STE +D+SSIDK+KRAAVTALSAAAVKAKLLA QEEDQIRQLTTSLIEKQ KMEAKL FFNEMEG++MRVKEQLDRSRQ+LYHERTQIIAARLGLPASSSRAMPP N ANR+ATN+ANSVARPPM A RPP+ RPMG M PT SNP+VS TVAGSSIRP SQDNLSSV TK Sbjct: 842 DVITEGKSESHTSTETKDDSSIDKVKRAAVTALSAAAVKAKLLAGQEEDQIRQLTTSLIEKQFSKMEAKLGFFNEMEGLMMRVKEQLDRSRQKLYHERTQIIAARLGLPASSSRAMPPANTANRIATNYANSVARPPMRTTAARPPMQRPMGPMAPTSSNPFVSTTVAGSSIRPASQDNLSSVRTK 1027
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A061E077_THECC (Chromatin remodeling complex subunit, putative isoform 1 OS=Theobroma cacao GN=TCM_006905 PE=4 SV=1) HSP 1 Score: 1030.39 bits (2663), Expect = 0.000e+0 Identity = 633/843 (75.09%), Postives = 716/843 (84.93%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXX-XXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTA-KEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVTT 2617 MEEKRRDAGNSPAGPSSAE EPA+TRRRAGAQKRKANSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG GSG G KLEE LVK+SV+AEDLEELNKASEE EALEAKIEAEFEAVRSRDSNAHVVPNHCGWFSW K H++EEC+LPSFFNGKSP+RTPDVY+EIRN IMKKFHANPS+QIE KDL D+EVGD+DARQEVLEFLDYWGLINFHPF P DSAV ++D D G+AK DSLLE LF FE IESRP VVP+ NLSTPS+PSGFLPESA+ +DL+R EGP+V+YHCNSCSADCSRKRYHCQKQADFDLC+DCF+N KFGSGMSSSDFILMEP EA GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVF+NC DNNI+ NSKE+ GPAAM+DET+V+K+VSE TESKTT +EDQA+T METSKPEDEKEV S E S+ +TGTDV+ ET KPE+ N K G + ENCAL A+REAFEAVGY LTSES LSFADVGNPVMALAGFFA LVGP IAAAS+QSSLKSLSG+ P+IQLAARNCF+LEDPPD+KEP S SV N NR AQNV++ E++ K DQ++SLS+HGD+NTEVS+ E+ TS SPN+L+TDKKE TNEEDKKANLNESS+I+QSKDHQPS+ + S+ + SQV S++EETGGK T+ +EPSQP +AVKEVDM+DSV L+KNEPCDAA SKPVGELSEPA+A +N+ET SPSR KNEQ VK GE T+P + S+DV++VS SQP ER EP Q VTSN++NENG TT Sbjct: 1 MEEKRRDAGNSPAGPSSAEPEPASTRRRAGAQKRKANSLSGSSSSSTPSKRITREKSNLISHPLINHN-GPLTRARQGAPSGNLALGFGSGSVGGKLEETSLVKDSVRAEDLEELNKASEEWEALEAKIEAEFEAVRSRDSNAHVVPNHCGWFSWTKVHNLEECVLPSFFNGKSPIRTPDVYMEIRNWIMKKFHANPSMQIELKDLSDLEVGDMDARQEVLEFLDYWGLINFHPFIPVDSAVPTSDSD--GMAKMDSLLEKLFRFEAIESRPPVVPRPNLSTPSVPSGFLPESAIAEDLVRPEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCSDCFSNGKFGSGMSSSDFILMEPAEAPGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFYNC-DNNIENNSKESTGPAAMSDETSVSKDVSEKTESKTTPREDQAQTTSMETSKPEDEKEVRVSVETSKPETGTDVEVDPETSKPEETNEAKGGQDTNENCALIALREAFEAVGYILTSESSLSFADVGNPVMALAGFFARLVGPKIAAASAQSSLKSLSGSSPSIQLAARNCFLLEDPPDDKEPNGSESVVNGMANRDAQNVENLEEKGPKEDKSSPVLDQQNSLSNHGDQNTEVSVPEDKVTSASPNELSTDKKEPDTLTTNEEDKKANLNESSVIDQSKDHQPSLMKESDNLASQVSLSSVEETGGKETSVEEPSQPTEAVKEVDMTDSVPLEKNEPCDAAVSKPVGELSEPAEALQNVETVPGSPSRGKNEQPPVKSTSVGEPTQPTEVSNDVEMVSDSQPLERIEPHQSVTSNNLNENGATT 839 HSP 2 Score: 267.7 bits (683), Expect = 2.711e-70 Identity = 154/186 (82.80%), Postives = 166/186 (89.25%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D+I+EGK+KNHD+ E + SIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKME KL+ FNEMEGV+MRVKEQLDRSRQRLYHER QIIAARLGLPASSSRAMPP N ANR+A NFANSVARPPMSM APRPP+SRP+G M PTP N +VS TVAGSSIRP S DNLSSV +K Sbjct: 840 DEIKEGKNKNHDAAETIGDLSIDKLKRAAVTALSAAAVKAKLLADQEEDQIRQLTTSLIEKQLHKMETKLASFNEMEGVIMRVKEQLDRSRQRLYHERAQIIAARLGLPASSSRAMPPTNTANRIAANFANSVARPPMSMTAPRPPMSRPIGPMAPTPPNLFVSTTVAGSSIRPASSDNLSSVESK 1025
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0D2TQ48_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G152400 PE=4 SV=1) HSP 1 Score: 848.581 bits (2191), Expect = 0.000e+0 Identity = 503/610 (82.46%), Postives = 528/610 (86.56%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVS--ADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVAN 1939 MEEKRRDA NSPA P E A+TRRR GA KRK NSLSGSSSSSTPSKR TREKS+ + ++ GPLTRARQGAPSGNLALG SG GGAKLEE LVK+SVKAEDLEEL + E +RSRDSNAHVVPNHCGWFSW K HH+EE ILPSFFNGKSP RTPD Y EIRN I+KKFHANPS QIE KDL D+EVGDLDARQEVLEFLDYWGLINFHPFPP SAV + DGD DG+ +KDSLLENLFHF+ IESRP VV K NLS+PS+PSG LPESAV +DL+ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN FGSGMSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTV K+VSETTESKTTQEDQA+T PMETSKPEDEKEV GSEEPSETKTGTD KGVKETLKPEDMNV KDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCS+ N Sbjct: 1 MEEKRRDAVNSPAEP-----ELASTRRRGGALKRKVNSLSGSSSSSTPSKRVTREKSNLISHSPVNHY-GPLTRARQGAPSGNLALGSSSGSGGAKLEETNLVKQSVKAEDLEELKASEELEALEAKIEADFEA-IRSRDSNAHVVPNHCGWFSWTKIHHLEESILPSFFNGKSPNRTPDAYKEIRNWIVKKFHANPSKQIELKDLEDLEVGDLDARQEVLEFLDYWGLINFHPFPPAGSAVPNPNGDGDGDGMTEKDSLLENLFHFDEIESRPQVVTKPNLSSPSLPSGLLPESAVAEDLMNPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGTFGSGMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVPKDVSETTESKTTQEDQAQTTPMETSKPEDEKEVRGSEEPSETKTGTDAKGVKETLKPEDMNVRKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIAAASSQSSLKSLSGTCPNIQLAARNCFVLEDPPDEKEPTCSKRYVN 602
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A067E5G1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001648mg PE=4 SV=1) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 442/802 (55.11%), Postives = 558/802 (69.58%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAEL-------EPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQ--XXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGD------CDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXD-QAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES----TNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVD-MSDSVQLKKNEPCDAAASKPVGELSEPADASENLETAS 2434 MEEKRR+AG PA SSA EPA++RRRAGA KRKA++LS +++SSTPSKR TREK+ + ++ GPLTRARQ + A G G G KLE ++ E +EELNKASEE ALEAKIEA+FEA+RSRDSN HVVP HCGWFSW K H +EE LP+FFNGKS RTPD+Y+EIRN IMKKFH+NP QIE KDL ++EVG LDARQEV+EFLDYWGLINFHPFP +S+V ++DGD D AKK SLLE L+ FE I++ P V P +++ P++PSG PESA+ ++L +LEGP+V+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN KFGS MSSSDFILM PGEA+G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED+F +CDD ++D N KET A N +T+ +K+V+E +ESKT + Q +T PMETSKPED E+ E+ S+ K +DVK ++ LK ED + K G E EN AL A+REAFEAVGY T E+ SFA+VGNPVMALA F L GP++ AS++SSLKS+SG P +QLAA++CF+LEDPP D+KE S S+ + +R Q + ED ++K D++ + HGD+ E S+ EE + S N+ ++K N T E+D+ +LNE S KD+QPS+ SN + S+VL S+ +E+ G+G++ EP+ P K+ +SDS+ KNEP S V E S P+ + +++ S Sbjct: 1 MEEKRREAGAQPAATSSAAAGAESAASEPASSRRRAGAHKRKASALSATNASSTPSKRMTREKNLVAHTPIYNHN-GPLTRARQGPTTLAAAAAFGGAPGSAGGKLE---AARDDSTFEAIEELNKASEEWAALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFPHVESSVANSDGDRMTDADSDAAAKKGSLLEKLYRFEEIKAGPPVAPMPSITFPAVPSGLFPESAIAEELAKLEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDD-DVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKES-GEGSSGEPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPSKLTNDVDMVS 796 HSP 2 Score: 202.601 bits (514), Expect = 1.391e-49 Identity = 128/186 (68.82%), Postives = 144/186 (77.42%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D+ +G+ + HDS E +++ IDKLK AAVTALSAAAVKAKLLA QEEDQIRQL TSLIEKQL K+EAKL+FFNEM+ V MRV+EQL+RSRQRLY ER II ARLG SR M P ANR FANSVARPPMSM +PRPP+SRPM + TPSNP+ S T AGSSIRP SQDNLSSVG K Sbjct: 857 DQNRDGQDEKHDSKETKNDQYIDKLKHAAVTALSAAAVKAKLLACQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQERALIIQARLG----PSRVMQPSVPANRNPMTFANSVARPPMSMTSPRPPISRPMVPQSSTPSNPFGSTTTAGSSIRPSSQDNLSSVGMK 1038 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 24
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BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092725 ID=g.barbadense_cottongen_reftransV1_0092725; Name=g.barbadense_cottongen_reftransV1_0092725; organism=Gossypium barbadense; type=contig; length=4555bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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