g.barbadense_cottongen_reftransV1_0092607, g.barbadense_cottongen_reftransV1_0092607 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 3.322e-124 Identity = 131/157 (83.44%), Postives = 143/157 (91.08%), Query Frame = -2 Query: 2052 MSGLYN--SNFSPARAASPQIRTTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN S FSPARAASPQIR+TP++DS QYL+ELLAEHQKL PFMQVLPICSRLLNQE+FRVSGMM+NQGFGDFDRLRHRSP PMASSNLMSNVS TGLGGWN L+QERLSG PGMTMDWQGAP SPSSYTVKRILRLEIPVD YP+ + + ++L Sbjct: 1 MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLL 157 HSP 2 Score: 199.904 bits (507), Expect = 3.322e-124 Identity = 96/105 (91.43%), Postives = 104/105 (99.05%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGRLLGPRGNSLKRVEATTGCRV+IRGKGSIKDP+KE+KLRGRPGYEHLN+ LHILIEADLPA++V+IRLRQAQEIIEELLKPVDESQDFIKRQQLRELA+L Sbjct: 150 FNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALL 254
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.411e-113 Identity = 122/156 (78.21%), Postives = 138/156 (88.46%), Query Frame = -2 Query: 2052 MSGLYN-SNFSPARAASPQIRT-TPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN +NFSP+RAASPQIRT + DVDSQY+S+LLAEHQKLGPFMQVLPICSRLLNQEIFR++GMM NQGF DFDRLRHRSP PMAS NLMSNVSG GLGGWN L ER+ GP GM M+WQGAPASPSSY VKRILRL++PVDTYP+ + + ++L Sbjct: 1 MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLL 156 HSP 2 Score: 202.216 bits (513), Expect = 1.411e-113 Identity = 117/134 (87.31%), Postives = 128/134 (95.52%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP+KEEKL+G+PGYEHLN+ LHILIEADLP ++VDI+LRQAQEIIEEL+KPVDESQD+IKRQQLRELA+LNSN E SPGPSGSVSPFNS+ MKRPKTG Sbjct: 149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTG 282
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: SPIN1_ORYSJ (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.646e-100 Identity = 104/155 (67.10%), Postives = 123/155 (79.35%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTP-DVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLY+ FSPAR SPQIR+ P DVDSQYL+ELLAEHQKLGPFMQVLPICS+LL+QEI RVS ++ N GFGDFDR R RSP PM+S N SN SG G WN L QERL P G +MDWQGAP SPSS+ VK+ILRL++PVD+YP+ + + ++L Sbjct: 1 MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGTSMDWQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRIL 155 HSP 2 Score: 191.43 bits (485), Expect = 5.646e-100 Identity = 89/105 (84.76%), Postives = 100/105 (95.24%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRGNSLKRVEA+TGCRV+IRGKGSIKDP KE+KLRG+PGYEHL+DPLHILIEA+ PA+++D RLR AQE+IEELLKPVDESQDF KRQQLRELAML Sbjct: 148 FNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRELAML 252
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.497e-60 Identity = 93/133 (69.92%), Postives = 111/133 (83.46%), Query Frame = -1 Query: 1552 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKT 1950 FNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KEE +RG+PGYEHLN+PLHIL+EA+LP +VD RL QA+EI+++LL P++E+ D K+QQLRELA+LN EE SGSVSP+NS GMKR KT Sbjct: 180 FNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312 HSP 2 Score: 89.3521 bits (220), Expect = 5.497e-60 Identity = 51/127 (40.16%), Postives = 69/127 (54.33%), Query Frame = -2 Query: 2052 QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2432 +YLSELLAE KL PF+ VLP RLLNQEI RV+ ++ N L H P P+AS + N + GW S S P +W +P S S KR +R++IPVD YP+ + + ++L Sbjct: 64 KYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQNARAD-MNGWASQFPSERSVPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLL 187
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana GN=At4g26480 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 7.725e-60 Identity = 76/105 (72.38%), Postives = 94/105 (89.52%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 +NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KE+ +RG+PGYEHLN+PLHIL+EA+LP +VD RL QA+EI+++LL PV+E+ DF K+QQLRELA+L Sbjct: 174 YNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALL 278 HSP 2 Score: 88.1965 bits (217), Expect = 7.725e-60 Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = -2 Query: 2052 QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2432 +YLSELLAE KL PF+ VLP RL+NQEI RV+ ++ N + R P P+AS + N S + GW S S +W +P S S VKR +R++IPVD YP+ + + ++L Sbjct: 60 KYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLL 181
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.174e-55 Identity = 69/105 (65.71%), Postives = 87/105 (82.86%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 +NFVGR+LGPRGNSLKRVE T CRV+IRG+GS+KD KEEKL+G+PGYEHL +PLH+LIEA+LP ++++ RL A +E LLKP+DES D KR+QL+ELA L Sbjct: 161 YNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKELAAL 265 HSP 2 Score: 90.5077 bits (223), Expect = 2.174e-55 Identity = 60/151 (39.74%), Postives = 79/151 (52.32%), Query Frame = -2 Query: 2052 ASPQIRTTPDVDSQ-YLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGT-GLGGWNSLTQER---------LSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2471 ASP P D + YL+ELL E QKLGPF+QV+P C RLLN EI RVS F D DR H SP +L +G L GW+ + E GP + W G P P+ VK+++RL++PVD YPS + + ++L Sbjct: 30 ASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLLNHEIRRVS------SFPDLDRYEHGSP----FRSLGQPTNGKLDLEGWSMMQAEENCHLQRASPFRGP--SPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRIL 168
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIB_DANRE (Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.067e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIB_XENLA (Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.393e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 97 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 201
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A0B0PD94_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_31230 PE=4 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 1.212e-138 Identity = 145/154 (94.16%), Postives = 150/154 (97.40%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSP PMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 219.55 bits (558), Expect = 1.212e-138 Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPAN+VD RLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNF E+SPGPSGSVSPFNSSGMKRPKTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVDTRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRPKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A0D2UT88_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G125700 PE=4 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 5.839e-138 Identity = 144/154 (93.51%), Postives = 149/154 (96.75%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGD DRLRHRSP PMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDLDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 219.55 bits (558), Expect = 5.839e-138 Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPAN+VD RLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNF E+SPGPSGSVSPFNSSGMKRPKTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVDTRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRPKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A061EIY7_THECC (RNA-binding KH domain-containing protein OS=Theobroma cacao GN=TCM_019653 PE=4 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 5.172e-136 Identity = 139/154 (90.26%), Postives = 148/154 (96.10%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+TPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMM+NQGFGDFDR+RHRSP PMASSNL+SNVSGTGLGGWNSL QERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMSNQGFGDFDRMRHRSPSPMASSNLISNVSGTGLGGWNSLPQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 221.09 bits (562), Expect = 5.172e-136 Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKRPKTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRPKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A0B0NLG2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_20322 PE=4 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 2.686e-135 Identity = 136/154 (88.31%), Postives = 147/154 (95.45%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYNSNFSPARAASPQIR+TP+V+SQYLSELLAEHQKLGPF+QVLPICSRLLNQEIFRVSGMM+NQGFGDFDRLRHRSP PMASSNLMSNV GTGLG WNSL QERLSGPPG+TMDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNSNFSPARAASPQIRSTPEVESQYLSELLAEHQKLGPFLQVLPICSRLLNQEIFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVYGTGLGSWNSLPQERLSGPPGVTMDWQGAPASPSSYTVKRILRLEIPVDTYPTFNFVGRLL 154 HSP 2 Score: 224.942 bits (572), Expect = 2.686e-135 Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = -1 Query: 1546 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTGY 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKRPKTGY Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRPKTGY 281
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A0D2UYJ5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G352600 PE=4 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 2.686e-135 Identity = 136/154 (88.31%), Postives = 147/154 (95.45%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYNSNFSPARAASPQIR+TP+V+SQYLSELLAEHQKLGPF+QVLPICSRLLNQEIFRVSGMM+NQGFGDFDRLRHRSP PMASSNLMSNV GTGLG WNSL QERLSGPPG+TMDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNSNFSPARAASPQIRSTPEVESQYLSELLAEHQKLGPFLQVLPICSRLLNQEIFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVYGTGLGSWNSLPQERLSGPPGVTMDWQGAPASPSSYTVKRILRLEIPVDTYPTFNFVGRLL 154 HSP 2 Score: 224.942 bits (572), Expect = 2.686e-135 Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = -1 Query: 1546 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTGY 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKRPKTGY Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRPKTGY 281
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A067JPA7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00627 PE=4 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 2.439e-133 Identity = 137/154 (88.96%), Postives = 145/154 (94.16%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLY+ NFSPARAASPQIR+TPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMM+NQGFGDFDRLRHRSP PMASSNLMSNV GTGLG WN L QERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYDPNFSPARAASPQIRSTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVGGTGLGSWNGLPQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 216.468 bits (550), Expect = 2.439e-133 Identity = 129/134 (96.27%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPAN+VD+RLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNF EESPGPSGSVSPFN+SGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRAKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: B9MTT7_POPTR (KH domain-containing family protein OS=Populus trichocarpa GN=POPTR_0006s11210g PE=4 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 6.898e-133 Identity = 135/154 (87.66%), Postives = 144/154 (93.51%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+TPDVDSQYLSELLAEHQKLGPFMQVLP CSRLLNQEIFRVSGMM+NQGFGDFDRLRHRSP PMASSNL+SNV GTGL GWN + QERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDSQYLSELLAEHQKLGPFMQVLPTCSRLLNQEIFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLLSNVGGTGLSGWNGIPQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 218.009 bits (554), Expect = 6.898e-133 Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNF EESPGPSGSVSPFN+SGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRAKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: B9T0N9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0126290 PE=4 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 2.294e-132 Identity = 138/154 (89.61%), Postives = 145/154 (94.16%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+TPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMM+NQGFGDFDRLRHRSP PMASSNLMSNVSGTGLG WN L QERLSGPPGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGSWNGLPQERLSGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 211.846 bits (538), Expect = 2.294e-132 Identity = 125/133 (93.98%), Postives = 130/133 (97.74%), Query Frame = -1 Query: 1552 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKT 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPAN+V++RLRQAQEII ELLKPVDESQDFIKRQQLRELAMLNSNF E+SPGPSGSVSPFN+SGMKR KT Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVEMRLRQAQEIIGELLKPVDESQDFIKRQQLRELAMLNSNFREDSPGPSGSVSPFNTSGMKRAKT 279
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: M5WJA4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009701mg PE=4 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 7.698e-132 Identity = 135/154 (87.66%), Postives = 144/154 (93.51%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+TPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGMM+NQGFGDFDR+RHRSP PMASSNLMSNV+GTGLGGWN L QERL GP GMTMDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMMSNQGFGDFDRMRHRSPSPMASSNLMSNVTGTGLGGWNGLPQERLGGPHGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 214.927 bits (546), Expect = 7.698e-132 Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELA+LNSNF EESPGPSGSVSPFNSSGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: I1N3C0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 4.166e-131 Identity = 134/154 (87.01%), Postives = 144/154 (93.51%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+ P+VDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMSNVSGTGLGGWNSL QERL GPPGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSNPEVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 213.772 bits (543), Expect = 4.166e-131 Identity = 129/134 (96.27%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEA+LPANVVDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEAELPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092607 ID=g.barbadense_cottongen_reftransV1_0092607; Name=g.barbadense_cottongen_reftransV1_0092607; organism=Gossypium barbadense; type=contig; length=2730bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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