g.barbadense_cottongen_reftransV1_0092607, g.barbadense_cottongen_reftransV1_0092607 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 3.322e-124 Identity = 131/157 (83.44%), Postives = 143/157 (91.08%), Query Frame = -2 Query: 2052 MSGLYN--SNFSPARAASPQIRTTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN S FSPARAASPQIR+TP++DS QYL+ELLAEHQKL PFMQVLPICSRLLNQE+FRVSGMM+NQGFGDFDRLRHRSP PMASSNLMSNVS TGLGGWN L+QERLSG PGMTMDWQGAP SPSSYTVKRILRLEIPVD YP+ + + ++L Sbjct: 1 MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLL 157 HSP 2 Score: 199.904 bits (507), Expect = 3.322e-124 Identity = 96/105 (91.43%), Postives = 104/105 (99.05%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGRLLGPRGNSLKRVEATTGCRV+IRGKGSIKDP+KE+KLRGRPGYEHLN+ LHILIEADLPA++V+IRLRQAQEIIEELLKPVDESQDFIKRQQLRELA+L Sbjct: 150 FNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALL 254
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.411e-113 Identity = 122/156 (78.21%), Postives = 138/156 (88.46%), Query Frame = -2 Query: 2052 MSGLYN-SNFSPARAASPQIRT-TPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN +NFSP+RAASPQIRT + DVDSQY+S+LLAEHQKLGPFMQVLPICSRLLNQEIFR++GMM NQGF DFDRLRHRSP PMAS NLMSNVSG GLGGWN L ER+ GP GM M+WQGAPASPSSY VKRILRL++PVDTYP+ + + ++L Sbjct: 1 MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLL 156 HSP 2 Score: 202.216 bits (513), Expect = 1.411e-113 Identity = 117/134 (87.31%), Postives = 128/134 (95.52%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP+KEEKL+G+PGYEHLN+ LHILIEADLP ++VDI+LRQAQEIIEEL+KPVDESQD+IKRQQLRELA+LNSN E SPGPSGSVSPFNS+ MKRPKTG Sbjct: 149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTG 282
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: SPIN1_ORYSJ (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.646e-100 Identity = 104/155 (67.10%), Postives = 123/155 (79.35%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTP-DVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLY+ FSPAR SPQIR+ P DVDSQYL+ELLAEHQKLGPFMQVLPICS+LL+QEI RVS ++ N GFGDFDR R RSP PM+S N SN SG G WN L QERL P G +MDWQGAP SPSS+ VK+ILRL++PVD+YP+ + + ++L Sbjct: 1 MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGTSMDWQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRIL 155 HSP 2 Score: 191.43 bits (485), Expect = 5.646e-100 Identity = 89/105 (84.76%), Postives = 100/105 (95.24%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRGNSLKRVEA+TGCRV+IRGKGSIKDP KE+KLRG+PGYEHL+DPLHILIEA+ PA+++D RLR AQE+IEELLKPVDESQDF KRQQLRELAML Sbjct: 148 FNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRELAML 252
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.497e-60 Identity = 93/133 (69.92%), Postives = 111/133 (83.46%), Query Frame = -1 Query: 1552 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKT 1950 FNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KEE +RG+PGYEHLN+PLHIL+EA+LP +VD RL QA+EI+++LL P++E+ D K+QQLRELA+LN EE SGSVSP+NS GMKR KT Sbjct: 180 FNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312 HSP 2 Score: 89.3521 bits (220), Expect = 5.497e-60 Identity = 51/127 (40.16%), Postives = 69/127 (54.33%), Query Frame = -2 Query: 2052 QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2432 +YLSELLAE KL PF+ VLP RLLNQEI RV+ ++ N L H P P+AS + N + GW S S P +W +P S S KR +R++IPVD YP+ + + ++L Sbjct: 64 KYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQNARAD-MNGWASQFPSERSVPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLL 187
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana GN=At4g26480 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 7.725e-60 Identity = 76/105 (72.38%), Postives = 94/105 (89.52%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 +NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KE+ +RG+PGYEHLN+PLHIL+EA+LP +VD RL QA+EI+++LL PV+E+ DF K+QQLRELA+L Sbjct: 174 YNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALL 278 HSP 2 Score: 88.1965 bits (217), Expect = 7.725e-60 Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = -2 Query: 2052 QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2432 +YLSELLAE KL PF+ VLP RL+NQEI RV+ ++ N + R P P+AS + N S + GW S S +W +P S S VKR +R++IPVD YP+ + + ++L Sbjct: 60 KYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLL 181
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.174e-55 Identity = 69/105 (65.71%), Postives = 87/105 (82.86%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 +NFVGR+LGPRGNSLKRVE T CRV+IRG+GS+KD KEEKL+G+PGYEHL +PLH+LIEA+LP ++++ RL A +E LLKP+DES D KR+QL+ELA L Sbjct: 161 YNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKELAAL 265 HSP 2 Score: 90.5077 bits (223), Expect = 2.174e-55 Identity = 60/151 (39.74%), Postives = 79/151 (52.32%), Query Frame = -2 Query: 2052 ASPQIRTTPDVDSQ-YLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGT-GLGGWNSLTQER---------LSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2471 ASP P D + YL+ELL E QKLGPF+QV+P C RLLN EI RVS F D DR H SP +L +G L GW+ + E GP + W G P P+ VK+++RL++PVD YPS + + ++L Sbjct: 30 ASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLLNHEIRRVS------SFPDLDRYEHGSP----FRSLGQPTNGKLDLEGWSMMQAEENCHLQRASPFRGP--SPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRIL 168
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIB_DANRE (Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.067e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIB_XENLA (Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.393e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 97 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 201
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: V7B586_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G079200g PE=4 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 1.159e-130 Identity = 134/154 (87.01%), Postives = 143/154 (92.86%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+ PDVDSQYLSELLAEHQKLGPFMQ LPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMSNVSGTGLGGWNSL QERL GPPGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSNPDVDSQYLSELLAEHQKLGPFMQALPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 212.231 bits (539), Expect = 1.159e-130 Identity = 128/134 (95.52%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVV+IRLRQAQEIIEELLKPV+ESQD+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVEIRLRQAQEIIEELLKPVEESQDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: D7TKY7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0056g00510 PE=4 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 1.512e-130 Identity = 135/154 (87.66%), Postives = 144/154 (93.51%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARA SPQIR+TPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM++NQGFGDFDRL+HRSP PMASSNLMSNVSGTGLGGWN L QERLSGP GMTMDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNHNFSPARAVSPQIRSTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIIRVSGMISNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGLGGWNGLPQERLSGPHGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 211.846 bits (538), Expect = 1.512e-130 Identity = 126/134 (94.03%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP+KE+KLRGRPGYEHLNDPLHILIEADLPAN+VD+RLRQAQEIIEELLKPVDESQDFIKRQQLRELA+LNSNF EESPGPSGSVSPFN+SGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEDKLRGRPGYEHLNDPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNFREESPGPSGSVSPFNTSGMKRAKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: I1L6X1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.799e-130 Identity = 133/154 (86.36%), Postives = 143/154 (92.86%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+ P+VDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMSNVSGTGLGGWNSL QERL G PGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSNPEVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 214.157 bits (544), Expect = 2.799e-130 Identity = 129/134 (96.27%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELA+LNSNF EESPGPSGSVSPFNSSGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A067FDL3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023068mg PE=4 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.315e-129 Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDV--DSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+TPD+ DSQYLSELLAEHQKLGPF QVLPICSRLL QEIFRVSGMM NQGFGDFDRLRHRSP PMASSNLMSNV+GTGLGGWN L QERL GPPGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 156 HSP 2 Score: 214.927 bits (546), Expect = 1.315e-129 Identity = 128/134 (95.52%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKE+KLRGRPGYEHLNDPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF E+SPGPSGSVSPFNSSGMKR KTG Sbjct: 149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRAKTG 282
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: V4UTE7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012376mg PE=4 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.315e-129 Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDV--DSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+TPD+ DSQYLSELLAEHQKLGPF QVLPICSRLL QEIFRVSGMM NQGFGDFDRLRHRSP PMASSNLMSNV+GTGLGGWN L QERL GPPGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 156 HSP 2 Score: 214.927 bits (546), Expect = 1.315e-129 Identity = 128/134 (95.52%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKE+KLRGRPGYEHLNDPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF E+SPGPSGSVSPFNSSGMKR KTG Sbjct: 149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRAKTG 282
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: C6TMR9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 5.732e-129 Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+ P+VDS+YLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMSNVSGTGLGGWNSL QERL G PGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSNPEVDSRYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 211.46 bits (537), Expect = 5.732e-129 Identity = 128/134 (95.52%), Postives = 131/134 (97.76%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEA TGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELA+LNSNF EESPGPSGSVSPFNSSGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEAITGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: I1L6X0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 6.025e-129 Identity = 133/155 (85.81%), Postives = 143/155 (92.26%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQE-RLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+ P+VDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMSNVSGTGLGGWNSL QE RL G PGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSNPEVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQEQRLCGAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 155 HSP 2 Score: 214.157 bits (544), Expect = 6.025e-129 Identity = 129/134 (96.27%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELA+LNSNF EESPGPSGSVSPFNSSGMKR KTG Sbjct: 148 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTG 281
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A067FM08_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023068mg PE=4 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 6.237e-128 Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDV--DSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+TPD+ DSQYLSELLAEHQKLGPF QVLPICSRLL QEIFRVSGMM NQGFGDFDRLRHRSP PMASSNLMSNV+GTGLGGWN L QERL GPPGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 156 HSP 2 Score: 209.149 bits (531), Expect = 6.237e-128 Identity = 128/138 (92.75%), Postives = 132/138 (95.65%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDK----EEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDK E+KLRGRPGYEHLNDPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF E+SPGPSGSVSPFNSSGMKR KTG Sbjct: 149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKVSTPEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRAKTG 286
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: V4SV43_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012376mg PE=4 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 6.237e-128 Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDV--DSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+TPD+ DSQYLSELLAEHQKLGPF QVLPICSRLL QEIFRVSGMM NQGFGDFDRLRHRSP PMASSNLMSNV+GTGLGGWN L QERL GPPGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 156 HSP 2 Score: 209.149 bits (531), Expect = 6.237e-128 Identity = 128/138 (92.75%), Postives = 132/138 (95.65%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDK----EEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDK E+KLRGRPGYEHLNDPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF E+SPGPSGSVSPFNSSGMKR KTG Sbjct: 149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKVSTPEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRAKTG 286
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A068UCU1_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_22 OS=Coffea canephora GN=GSCOC_T00023192001 PE=4 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 1.870e-127 Identity = 129/155 (83.23%), Postives = 138/155 (89.03%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARA SPQIRT DVDS QYLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM+ NQGFGD DRLRHRSP PMASSNLMSNV+GTG+ GWN L QERLSG PGMTMDWQGAPASPSS+TVKRILRLEIPVD YP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAVSPQIRTNSDVDSNQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMIPNQGFGDLDRLRHRSPSPMASSNLMSNVAGTGIAGWNGLPQERLSGTPGMTMDWQGAPASPSSFTVKRILRLEIPVDNYPNFNFVGRLL 155 HSP 2 Score: 218.394 bits (555), Expect = 1.870e-127 Identity = 130/134 (97.01%), Postives = 133/134 (99.25%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF EESPGPSGSVSPFN+SGMKRPKTG Sbjct: 148 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRPKTG 281 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092607 ID=g.barbadense_cottongen_reftransV1_0092607; Name=g.barbadense_cottongen_reftransV1_0092607; organism=Gossypium barbadense; type=contig; length=2730bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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