g.barbadense_cottongen_reftransV1_0092163, g.barbadense_cottongen_reftransV1_0092163 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Match: B9I3G3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s08930g PE=4 SV=2) HSP 1 Score: 1084.32 bits (2803), Expect = 0.000e+0 Identity = 630/932 (67.60%), Postives = 750/932 (80.47%), Query Frame = 1 Query: 670 FIIYTVPPTAYITSSTPFTNALNVSVNISFTEXXXXXXXXXXXXVNDCNLLVYGAGQVVPSSLTVVEPNLKYLLLVSISSASRYGRLVLVMDTNFCTDAAGNPFARSQNSSFYVHYDQRNVFVDLRAHVPEKLLQLRSETRTIQATNNYNNLKVYLYFSAPXXXXXXXXXXXXXXXKGTLLPITGENHGNRRFGFMVXXXXXXXXXXXXFDANSTISRQGTLVSPVAPVTFLYDSQRTAVRLSTTCRMRTREHNIPISIKFMKPVFGFNSSLISISGGRLQSFHEISRSIYAAAIQADDDVVSVSVPENVTGDVAGNKNLASNVLRVRHYTIPXXXXXXXXXXTAIFLLTCFTAGLLTMSTASLQSVGAFXXXXXXXXXDPTRILFRSACHIQIFALSRWLPVTLPVEYYEFARSMEWSIPYFSLPWETGHVQPVMMGSSPTGTSNSFLSRTYDRVISRSFQ-----PNKIAAAVYGSPLTPVEYRSFFESQSIIPEAEYISDGLHSNGWRNFDRSMFWLAVIGGSXXXXXXXXXXXXKYKKRDSEKQGSYGALIFPRFEIFLVIVALPCICQAAAALIAGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXGITFGKLLQYKEVHREGQQFHWYQELIRVTLGPGKRGQWTWKNEANSVYLTMFGPLFEDLRGPPKYMVSQISGSNLSRQGGPIIASDDETEDAEAPFIQKLFGILRIYYTMLESARRATLGILAGAYLNNNNTSSKTPIIILLCLTSFQLFFLVLKKPFIKKKVQLVEIISLSCEVAMFATCFVLLDKEFS----TTIGIFMLTLFLIGFLAQMSAEGYALYEQTKQLDTSENKFFTGLKIASVGFLLYFVPQKLMKSFESTFPV--FGLCMDTSTTGLPCDRN-------SSSSERAWPRQLREMAKASFSKDGSKAPTDP 3411 + + T+PPTAYIT+S FTNALNVSVNISFTE C+GGGGF CSSVN CNL+VYGAGQV+PSSLTV+EPNLKY LLV + YGR+VLVMD NFCTDAAGN F R+ NSSF+VH D+R VFVDLR H+PEKLLQL +E RT++ATNNY+NLK YLYFS PILNSS EIL+SL+ S+G LLPI+GEN NR+FGF VAN+S+IAIITIS +NS ISR GT VSP+AP TFLYDSQR VRLST RT EH+IPISIKFMKPVFGFNSS +SI GG LQ FHEISRS Y A ++ADDDVVSVSVP+NVTGDVAGNKNL SN+L+VR +++P+ISSVIS F TA FL T AGLLT+STASL S GAFSRPS L+++PTR LFRSACHIQ+FALSRWL VTLP+EYYEFA+ ++WSIPYF LPWETG V P+M+ S+ NS++S+T+D IS++ Q NK ++ V+G PL P+EY SFFESQ+ PEAE+I D HSNGWR+FDRSMFWLAVIG SL+LLH L FI+K +KR ++KQ YGAL FPRFEIFL ++ALPCIC+A+A+L+ GGT SG++VGILLLGVV FLLL+L L LS+GITFGKLLQYKE+H+EGQ FHWY+++ RVTLGPGKRGQWTWKN++NSVYL GPLFEDLRGPPKYM+SQI+G +QG IIASDDETEDAEAPFIQKLFGILRIYYT+LES +R +LGI+AGAYL +N SSKTP ++LL +T FQLFFLVLKKPFIKKKVQLVEIIS++ +V++FATCF+LL+K+ S T +GIFM+ LFLIGFLAQM E YALY Q K LD SE F TGLK AS+GFLL+F+P++L ++ ES P G TG DRN S ++ W +QLRE+A+ASFSK+ S + DP Sbjct: 113 WTVDTIPPTAYITASKSFTNALNVSVNISFTEPCTGGGGFGCSSVNACNLIVYGAGQVIPSSLTVLEPNLKYTLLVGLYPNVFYGRVVLVMDKNFCTDAAGNRFTRAANSSFFVHLDRRRVFVDLRIHIPEKLLQLNNEIRTVKATNNYDNLKFYLYFSEPILNSSAEILNSLNTSEGVLLPISGENLMNRKFGFQVANLSSIAIITISLLSNSIISRPGTSVSPIAPSTFLYDSQRPVVRLSTLSNTRTGEHSIPISIKFMKPVFGFNSSFLSIGGGHLQGFHEISRSKYIAEVKADDDVVSVSVPQNVTGDVAGNKNLGSNILQVRRHSVPMISSVISAFATACFLATSLAAGLLTLSTASLLSAGAFSRPSPLLTAEPTRNLFRSACHIQVFALSRWLAVTLPIEYYEFAKGLQWSIPYFILPWETGGVHPIMVKSNSFSILNSYISKTHD--ISQNMQLEGKSGNK-SSPVFGLPLAPMEYISFFESQNFKPEAEHIIDPQHSNGWRDFDRSMFWLAVIGVSLVLLHVILLFIIKLRKRTADKQRDYGALTFPRFEIFLTVLALPCICKASASLVRGGTASGIIVGILLLGVVGFLLLALLLILSIGITFGKLLQYKEIHQEGQIFHWYRDITRVTLGPGKRGQWTWKNKSNSVYLIRLGPLFEDLRGPPKYMLSQIAGVP-RKQGDHIIASDDETEDAEAPFIQKLFGILRIYYTLLESVKRVSLGIVAGAYL--DNWSSKTPTVVLLSITFFQLFFLVLKKPFIKKKVQLVEIISITSQVSIFATCFILLEKKLSTREETRVGIFMILLFLIGFLAQMVNEWYALYRQIKWLDPSEQYFLTGLKTASIGFLLFFIPRRLSQNLESKLPARQHGDRETGGETGSSVDRNKISGSKGSGKPDKPWQKQLRELARASFSKERSGSQNDP 1038 HSP 2 Score: 127.102 bits (318), Expect = 3.110e-26 Identity = 65/115 (56.52%), Postives = 81/115 (70.43%), Query Frame = 2 Query: 305 MGFFNMSCLIXXXXXXXXXXXKGNCDDSQFTLKFFKAPHPFSHLNSAKFVFQVLGAANV-TCSDCSITCKLDDGSASDCGGRKILYSGLQDGNHSFGVCVNGSQGAACTSYNWTV 646 MG +S L+LL L F+ C+D++ +KF KAPH FSHLN A F FQVL +V +C++CS +CKLD GS SDCG K+ Y GLQDGNH+F VC+NGSQGA C +YNWTV Sbjct: 1 MGRPKLSWLVLLCWALLFLCFRALCEDAEVFVKFLKAPHAFSHLNIATFEFQVLVGGDVNSCTNCSFSCKLDSGSESDCGATKVSYQGLQDGNHTFEVCINGSQGAGCATYNWTV 115
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Match: B9IEU0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s09010g PE=4 SV=2) HSP 1 Score: 1052.74 bits (2721), Expect = 0.000e+0 Identity = 591/880 (67.16%), Postives = 713/880 (81.02%), Query Frame = 1 Query: 814 NLLVYGAGQVVPSSLTVVEPNLKYLLLVSISSASRYGRLVLVMDTNFCTDAAGNPFARSQNSSFYVHYDQRNVFVDLRAHVPEKLLQLRSETRTIQATNNYNNLKVYLYFSAPXXXXXXXXXXXXXXXKGTLLPITGENHGNRRFGFMVXXXXXXXXXXXXFDANSTISRQGTLVSPVAPVTFLYDSQRTAVRLSTTCRMRTREHNIPISIKFMKPVFGFNSSLISISGGRLQSFHEISRSIYAAAIQADDDVVSVSVPENVTGDVAGNKNLASNVLRVRHYTIPXXXXXXXXXXTAIFLLTCFTAGLLTMSTASLQSVGAFXXXXXXXXXDPTRILFRSACHIQIFALSRWLPVTLPVEYYEFARSMEWSIPYFSLPWETGHVQPVMMGSSPTGTSNSFLSRTYDRVISRSFQPNKI--AAAVYGSPLTPVEYRSFFESQSIIPEAEYISDGLHSNGWRNFDRSMFWLAVIGGSXXXXXXXXXXXXKYKKRDSEKQGSYGALIFPRFEIFLVIVALPCICQAAAALIAGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXGITFGKLLQYKEVHREGQQFHWYQELIRVTLGPGKRGQWTWKNEANSVYLTMFGPLFEDLRGPPKYMVSQISGSNLSRQGGPIIASDDETEDAEAPFIQKLFGILRIYYTMLESARRATLGILAGAYLNNNNTSSKTPIIILLCLTSFQLFFLVLKKPFIKKKVQLVEIISLSCEVAMFATCFVLLDKEFS----TTIGIFMLTLFLIGFLAQMSAEGYALYEQTKQLDTSENKFFTGLKIASVGFLLYFVPQKLMKSFESTFPVFGLCMDTST---TGLPCDRNSSSS-----ERAWPRQLREMAKASFSKDGSKAPTDP 3411 +LLVYGAGQV+PSSLTV+EPNLKY LLV +S + YGR++LVMD NFCTD AGN F R+ NSSF+VH D+R+VFVDLR H+PEKLLQL +E RT++ATNN +NLK Y+YFS PILNSS EIL+SL+ S+G LLPI+GEN GNR+FGF VAN+S+IA++TI +NS ISR GT VSP+APVTFLYDSQR AVRLST+ RT+EH+IPISIKF+KPVFGFNSS +SISGG LQ FHEISRS Y A I+ADDD++SVS+P+NV GDVAGNKNLASN+L+VRHY++P ISSVIS F TA FL T AGLLT+STASL S GAFSRPSS L+++PTR +FR+ACHIQ+FA+SRWL VTLPVEYYEFAR+++WSIPYFSLPWETG +QP+M+ S+ + ++S++S+T+D +S + + ++ VYG PL+P+EY SFFESQS PEAE++ D HSNGWR+FDRSMFWLAVIGGS+ILLHA L FILK +K ++EKQ YGAL PRFEIFL +ALPCIC A+AAL+ GGT SG++VGILLLGVV F+LL+LFL LS+GITFGKLLQYKEVH+EGQ FHWYQ++IRVTLGPGKRGQWTWKN+ SVYL G LFEDLRGPPKYM+SQI+G QG IIASDDETEDAEAPFIQKLFG+LRIYYT+LES +R +LGILAG YL ++ SSKTP ++LL +T FQLFFLVLKKPFIKKKVQLVEIIS+SC+V +FATCF+LL+KE S T +GIFM+ LFLIGFLAQM+ E YALY Q +LD SE F TGLK AS+GFLL F+ + L + ES P D T G DRN SS ++ W +QLRE+A+ASF+K+ S + DP Sbjct: 17 HLLVYGAGQVIPSSLTVLEPNLKYTLLVGLSPSVLYGRVILVMDKNFCTDTAGNRFTRAANSSFFVHVDRRSVFVDLRIHIPEKLLQLNNEIRTVKATNNDDNLKFYMYFSEPILNSSAEILNSLNTSQGVLLPISGENLGNRKFGFQVANLSSIAVVTIGLLSNSIISRPGTSVSPIAPVTFLYDSQRPAVRLSTSSNTRTKEHSIPISIKFVKPVFGFNSSFLSISGGHLQGFHEISRSKYIAEIKADDDILSVSIPQNVIGDVAGNKNLASNILQVRHYSVPTISSVISAFATACFLATSLAAGLLTLSTASLLSAGAFSRPSSLLTAEPTRNIFRTACHIQVFAMSRWLAVTLPVEYYEFARNLQWSIPYFSLPWETGDIQPIMVKSNSSSGAHSYISKTHDISLSMQLKGKSVNKSSPVYGLPLSPMEYLSFFESQSFKPEAEHVLDPQHSNGWRDFDRSMFWLAVIGGSMILLHAILLFILKLRKGNTEKQRDYGALTLPRFEIFLTFLALPCICVASAALVRGGTTSGIIVGILLLGVVGFILLALFLILSIGITFGKLLQYKEVHQEGQIFHWYQDIIRVTLGPGKRGQWTWKNQPKSVYLVRLGALFEDLRGPPKYMLSQIAGVP-RNQGDRIIASDDETEDAEAPFIQKLFGVLRIYYTLLESVKRVSLGILAGVYL--DSWSSKTPTVVLLSITCFQLFFLVLKKPFIKKKVQLVEIISISCQVCIFATCFILLEKELSTGVETKVGIFMIALFLIGFLAQMANEWYALYRQIMRLDPSEKYFLTGLKTASIGFLLLFISKGLSQDLESKLPAKRRS-DGGTGGEAGSSVDRNKSSGSPGTPDKPWQKQLRELARASFTKERSGSRNDP 892
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Match: G7J5D6_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_3g077550 PE=4 SV=2) HSP 1 Score: 1036.56 bits (2679), Expect = 0.000e+0 Identity = 586/926 (63.28%), Postives = 721/926 (77.86%), Query Frame = 1 Query: 682 TVPPTAYITSSTPFTNALNVSVNISFTEXXXXXXXXXXXXVNDCNLLVYGAGQVVPSSLTVVEPNLKYLLLVSISSASRYGRLVLVMDTNFCTDAAGNPFARSQNSSFYVHYDQRNVFVDLRAHVPEKLLQLRSETRTIQATNNYNNLKVYLYFSAPXXXXXXXXXXXXXXXKGTLLPITGENHGNRRFGFMVXXXXXXXXXXXXFDANSTISRQGTLVSPVAPVTFLYDSQRTAVRLSTTCRMRTREHNIPISIKFMKPVFGFNSSLISISGGRLQSFHEISRSIYAAAIQADDDVVSVSVPENVTGDVAGNKNLASNVLRVRHYTIPXXXXXXXXXXTAIFLLTCFTAGLLTMSTASLQSVGAFXXXXXXXXXDPTRILFRSACHIQIFALSRWLPVTLPVEYYEFARSMEWSIPYFSLPWETGHVQPVMMGSSPTGTSNSF---LSRTYDRVISRSFQPNKIAAAVYGSPLTPVEYRSFFESQSIIPEAEYISDGLHSNGWRNFDRSMFWLAVIGGSXXXXXXXXXXXXKYKKRDSEKQGSYGALIFPRFEIFLVIVALPCICQAAAALIAGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXGITFGKLLQYKEVHREGQQFHWYQELIRVTLGPGKRGQWTWKNEANSVYLTMFGPLFEDLRGPPKYMVSQISGSNLSRQGGPIIASDDETEDAEAPFIQKLFGILRIYYTMLESARRATLGILAGAYLNNNNTSSKTPIIILLCLTSFQLFFLVLKKPFIKKKVQLVEIISLSCEVAMFATCFVLLDKEFS----TTIGIFMLTLFLIGFLAQMSAEGYALYEQTKQLDTSENKFFTGLKIASVGFLLYFVPQKLMKSFESTFPVFGLC-MDTSTTGLPCDRNSSSSERA-------WPRQLREMAKASFSKDGSKAP-TDP 3411 T+PPTAY+T++T FT++LNVSVNISF+E C G G S VN CNLLVYGAGQV+PSS +++PNL Y LLVS+SS +Y R +LVMD NFCTD AGN F R NSS Y+H D+R V+V++R HVPEKL+Q+ SETRT+QATN++N LKVYLYFSAP+LNSSTEI++SL +S+G+LLP + EN GNRRFGFM+ANIS+ AII+++F++ S I+RQGT VSP APV FLYDS+R AV LST RMRT++HNI I I+F+KPVFGFN+S ISISGG L+SFH++ S Y +QADDD V VSVPENVT DVAGNKNLASNVL+VRHY++P+ISSVIS F TA F LT AGLLT+STASLQSV F+R SS L DP R LFR CHIQ+FAL+RWL V PVE+YEF+R ++W+IP FS+PWE+G + M+GSSP G+S+S L+ + ++ ++ A+VYGSPLT EY+ +FES ++ PEAEYI D HS+GW +F R+MFWLAVI GS ++LH FL ILK++KR+SEK G+YGAL+FPRFEIFL+ +ALP IC+A+ LI GG P+ + VGI+LL V+ +LL+LF+FLSVGITFGKLLQYKEVH EG+ FHWYQELIRVTLGPGKRGQWTWK +A SVYLT+FGPLFEDLRGPPKYM+SQISG + Q II SDDETEDAEAPFIQKLFGILRIY+ LES RR +LGILAG +++ + SSK+PIII+L +TSF LFF+VLKKPFIKKKVQLVEIISL+CEVA FATCFVLL K+FS T GIFML LFL+G+ +Q++ E YALY QTK LD E F GLK+AS+GF+LYF+PQK +K+ E P G +T L +R S R+ W +++RE+AK SFSKD S TDP Sbjct: 118 TIPPTAYVTAATSFTSSLNVSVNISFSEPCIGEGFRCKS-VNACNLLVYGAGQVIPSSFKILKPNLMYSLLVSLSSTVQYSRAILVMDKNFCTDIAGNSFTRMPNSSVYIHIDRRKVYVNIRTHVPEKLVQINSETRTVQATNDHNKLKVYLYFSAPVLNSSTEIMNSLKVSQGSLLPTSAENLGNRRFGFMIANISSTAIISVNFNSKSIITRQGTQVSPNAPVNFLYDSKRPAVMLSTH-RMRTKDHNIQILIEFVKPVFGFNTSCISISGGLLKSFHKLKWSTYIVELQADDDFVFVSVPENVTHDVAGNKNLASNVLQVRHYSVPLISSVISAFATATFGLTSIAAGLLTISTASLQSVDTFTRSSSFLIVDPARNLFRILCHIQVFALARWLSVKWPVEFYEFSRHLQWTIPSFSVPWESGPMSLFMVGSSPFGSSSSSAKALATIPNMLLGQNLN---YGASVYGSPLTSSEYQQYFESTNMKPEAEYILDSQHSSGWTDFYRTMFWLAVICGSFMVLHGFLLIILKFRKRNSEKNGTYGALVFPRFEIFLLFLALPGICKASTGLIRGGAPAAMAVGIILLIFVSTVLLALFMFLSVGITFGKLLQYKEVHHEGETFHWYQELIRVTLGPGKRGQWTWKEKAKSVYLTIFGPLFEDLRGPPKYMLSQISGGSQPSQNDHIIVSDDETEDAEAPFIQKLFGILRIYFVFLESIRRVSLGILAGVFIHTRSQSSKSPIIIMLSITSFMLFFMVLKKPFIKKKVQLVEIISLTCEVAFFATCFVLLKKDFSVRTETKFGIFMLVLFLVGYCSQIANEWYALYAQTKLLDPEEKSLFRGLKVASIGFVLYFIPQKWIKNLEKKLPQNGHANSETRDNALIAERCMHSGSRSSGTPDIPWLKRVRELAKGSFSKDRSGVQITDP 1038 HSP 2 Score: 105.916 bits (263), Expect = 1.171e-19 Identity = 51/93 (54.84%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 374 NCDDSQFTLKFFKAPHPFSHLNSAKFVFQVLGA-ANVTCSDCSITCKLDDGSASDCGGRKILYSGLQDGNHSFGVCVNGSQGA-ACTSYNWTV 646 C S T+KF KAPH FSHLNSA F F+VL + +N +C++CS++CKLD+G S C ++ YS L+DGNH+F VC NG QG C S+NWTV Sbjct: 24 KCGGSDVTVKFLKAPHAFSHLNSATFAFEVLNSGSNRSCANCSLSCKLDNGIRSVCTNGRVTYSSLKDGNHTFEVCTNGHQGLFGCASHNWTV 116
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Match: M5WE80_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000610mg PE=4 SV=1) HSP 1 Score: 1033.09 bits (2670), Expect = 0.000e+0 Identity = 599/949 (63.12%), Postives = 739/949 (77.87%), Query Frame = 1 Query: 637 LDCWLRNLPLFFIIYTVPPTAYITSSTPFTNALNVSVNISFTEXXXXXXXXXXXXVNDCNLLVYGAGQVVPSSLTVVEPNLKYLLLVSISSASRYGRLVLVMDTNFCTDAAGNPFARSQNSSFYVHYDQRNVFVDLRAHVPEKLLQLRSETRTIQATNNYNNLKVYLYFSAPXXXXXXXXXXXXXXXKGTLLPITGENHGNRRFGFMVXXXXXXXXXXXXFDANSTISRQGTLVSPVAPVTFLYDSQRTAVRLSTTCRMRTREHNIPISIKFMKPVFGFNSSLISISGGRLQSFHEISRSIYAAAIQADDDVVSVSVPENVTGDVAGNKNLASNVLRVRHYTIPXXXXXXXXXXTAIFLLTCFTAGLLTMSTASLQSVGAFXXXXXXXXXDPTRILFRSACHIQIFALSRWLPVTLPVEYYEFARSMEWSIPYFSLPWETGHVQPVMMGSSPTGTSNSFLSRTYDRVISRSFQPNK----IAAAVYGSPLTPVEYRSFFE--SQSIIPEAEYISDGLHSNGWRNFDRSMFWLAVIGGSXXXXXXXXXXXXKYKKRDSEKQGSYGALIFPRFEIFLVIVALPCICQAAAALIAGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXGITFGKLLQYKEVHREGQQFHWYQELIRVTLGPGKRGQWTWKNEANSVYLTMFGPLFEDLRGPPKYMVSQISGSNLSRQGGPIIASDDETEDAEAPFIQKLFGILRIYYTMLESARRATLGILAGAYLNNNNTSSKTPIIILLCLTSFQLFFLVLKKPFIKKKVQLVEIISLSCEVAMFATCFVLLDKEFS----TTIGIFMLTLFLIGFLAQMSAEGYALYEQTKQLDTSENKFFTGLKIASVGFLLYFVPQKLMKSFESTFPV----------FGLCMD-TSTTG---LPCDRNSSSSERAWPRQLREMAKASFSKDGSKAPTDP 3411 + C L N + + TVPPTA +T+S FT+ALNVSVNISF+ESCSGGGGF C S N CNLLVYGAGQV+PSSL++++PNLKY LLV +SS+ +YGR+VLVMD NFCTD AGN F R++NS FYV D+RNVFV+LR H+PE+LLQL ETRT+QATNNYNNLK+Y+YFS P+LNSS +IL+SL+IS+G+LLP +G N GNRRFGF+VAN+S+IAIIT+S ++N ISRQGT VSP++P TFL+DS+R V+LSTT MRTREHNIPI IKFMKPVFGFNSS +S+S +A DD+VSV+VPEN++GDVAGNKNLASN+LRV HY++P+I+SVIS F TA+F++T AGLL++STASLQS+ +F SSL+SDP R LFR ACHIQ+FALSRWL VTLPV YYE R + WSIPYFSLPWE G+ PV + +S+S+++ + + +S Q K ++YG PLTP EYR+FFE S++I PEA+YIS+ SN WRNFDR+MFWLAVI G+LILLH + FILK +K++SEKQ SYGAL FPRFEIFLVI+ALPCI +A+AAL+ GG PSGV+VG LL + +FLLL+L FLSVGITFGKLLQYKEVHREG +FHWYQEL+RVTLGPGKRGQWTWK + NSVYL +FGPLFEDLRGPPKYM+SQISG N + G IIASDDETEDAEAPFIQK+FGILRIYYT+LE +R +G++AG Y+ + SSKTP + LLC+TSFQLFFLVLKKPFIKKKVQLVEIIS+S EV +FATC VLL+KEFS T +GIFML LFL+G++AQM E YALY+QT LD++E F TGLK+AS+G LL +PQ+L+K+ E F V G D +S+TG +R+ + +++ W +QLRE+AK+SFSK+GS DP Sbjct: 106 IGCALHN----WTVDTVPPTASVTASRSFTDALNVSVNISFSESCSGGGGFGCLSANTCNLLVYGAGQVIPSSLSILQPNLKYSLLVGLSSSVQYGRVVLVMDKNFCTDIAGNRFVRTENSRFYVRIDRRNVFVNLRIHIPERLLQLNGETRTVQATNNYNNLKIYVYFSEPVLNSSAQILNSLNISQGSLLPASGNNTGNRRFGFVVANMSSIAIITVSLNSNLIISRQGTPVSPISPATFLFDSKRPTVKLSTTSSMRTREHNIPILIKFMKPVFGFNSSSLSLS-------------------EAVDDMVSVNVPENISGDVAGNKNLASNILRVTHYSVPLIASVISAFATALFVVTSLAAGLLSISTASLQSLWSF-SRPSSLASDPARNLFRIACHIQVFALSRWLAVTLPVNYYELVRGLRWSIPYFSLPWEAGNGFPVSSPFT---SSSSYMTENHGSEVFQSKQLEKEIFSKDTSLYGLPLTPTEYRTFFELDSENIKPEADYISNPYSSNRWRNFDRTMFWLAVICGTLILLHVLVLFILKMRKKNSEKQSSYGALTFPRFEIFLVILALPCIYEASAALVRGGMPSGVIVGSSLLVITSFLLLALLFFLSVGITFGKLLQYKEVHREGLEFHWYQELVRVTLGPGKRGQWTWKGQPNSVYLIIFGPLFEDLRGPPKYMLSQISGGNPQKHGESIIASDDETEDAEAPFIQKVFGILRIYYTLLECLKRVAVGVMAGVYM--DKWSSKTPSVALLCITSFQLFFLVLKKPFIKKKVQLVEIISISSEVGLFATCVVLLEKEFSAGDKTKVGIFMLFLFLVGYVAQMINEWYALYKQTLLLDSAEKSFLTGLKLASIGCLLLIIPQRLIKTLEKKFQVESKFQVTQNAEGATRDPSSSTGGYRGSGNRSLAGTDKPWLKQLRELAKSSFSKEGSGVTNDP 1025 HSP 2 Score: 124.79 bits (312), Expect = 1.457e-25 Identity = 64/115 (55.65%), Postives = 80/115 (69.57%), Query Frame = 2 Query: 305 MGFFNMSCLIXXXXXXXXXXXKGNCDDSQFTLKFFKAPHPFSHLNSAKFVFQVLGAANV-TCSDCSITCKLDDGSASDCGGRKILYSGLQDGNHSFGVCVNGSQGAACTSYNWTV 646 MG + S +LL VF +L K + D S+ ++KFFKAPH FSHLNSA F F+ L N +C++CS +CKLDDG S+CG RK+ YSGLQDGNH+F VC NG QG C +NWTV Sbjct: 1 MGLLHTSWAVLLLWVFPLLLLKAHSDGSEVSVKFFKAPHAFSHLNSATFAFEALVGGNAASCTNCSFSCKLDDGMGSNCGTRKVSYSGLQDGNHTFEVCTNGPQGIGCALHNWTV 115
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Match: K4BKC9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g112760.2 PE=4 SV=1) HSP 1 Score: 1025.39 bits (2650), Expect = 0.000e+0 Identity = 571/925 (61.73%), Postives = 724/925 (78.27%), Query Frame = 1 Query: 670 FIIYTVPPTAYITSSTPFTNALNVSVNISFTEXXXXXXXXXXXXVNDCNLLVYGAGQVVPSSLTVVEPNLKYLLLVSISSASRYGRLVLVMDTNFCTDAAGNPFARSQNSSFYVHYDQRNVFVDLRAHVPEKLLQLRSETRTIQATNNYNNLKVYLYFSAPXXXXXXXXXXXXXXXKGTLLPITGENHGNRRFGFMVXXXXXXXXXXXXFDANSTISRQGTLVSPVAPVTFLYDSQRTAVRLSTTCRMRTREHNIPISIKFMKPVFGFNSSLISISGGRLQSFHEISRSIYAAAIQADDDVVSVSVPENVTGDVAGNKNLASNVLRVRHYTIPXXXXXXXXXXTAIFLLTCFTAGLLTMSTASLQSVGAFXXXXXXXXXDPTRILFRSACHIQIFALSRWLPVTLPVEYYEFARSMEWSIPYFSLPWETGHVQPVMMGSSPTGTSNSFLSRTYDRVIS-RSFQPNKIAAAVYGSPLTPVEYRSFFESQSIIPEAEYISDGLHSNGWRNFDRSMFWLAVIGGSXXXXXXXXXXXXKYKKRDSEKQGSYGALIFPRFEIFLVIVALPCICQAAAALIAGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXGITFGKLLQYKEVHREGQQFHWYQELIRVTLGPGKRGQWTWKNEANSVYLTMFGPLFEDLRGPPKYMVSQISGSNLSRQGGPIIASDDETEDAEAPFIQKLFGILRIYYTMLESARRATLGILAGAYLNNNNTSSKTPIIILLCLTSFQLFFLVLKKPFIKKKVQLVEIISLSCEVAMFATCFVLLDKEFS---TTIGIFMLTLFLIGFLAQMSAEGYALYEQTKQLDTSENKFFTGLKIASVGFLLYFVPQKLMKSFESTFPVFGLCM-DTSTTGLPCDRN------SSSSERAWPRQLREMAKASFSKDGSKAPTDP 3411 + + T+ PTAYIT+ T FTNA NVSV+I+FTE C GGF C+S N CNLLVYGAGQVVP++L V+EP+LK+ ++VS+S+ +YGR++LVMD NFC+D AGN F R+ NSS ++H+D+R VF D+R H+PE+LLQ+ SE RT++ATN+ N++VYLYF+ PI NSST+IL+SLSIS+G L PI+G + G RRFGF V IS AI+T+S ++ +S QGT ++PVAPVTFLYD QR AVRLSTT RMRT + IP+ IKF+KPVFGFNSS +SISGG+LQSF E+SRS+Y IQA DD VSVS+PENVTGDVAGN NL SNVLR++HYT+PV S V+SI T+ F++T F AGLLT+STASLQSVGA+SRPSS ++SDP R LFR ACHIQ FAL+RWLP+TLPVEYYEFAR ++WS+PYFSLPWE G + MMG T +S+ S+ D + + NK AAA+YG PL+P+EYRS F SQ ++PEA+YI D +SNGWR+F+RSMFWLAVIGGSLILLHA + F+L+ +K D EK+ SYGAL+FPRFEIFL I+A+PCIC+A+ ++ GG+ +G+ VGILLLG+V+FLLL LFLFLS+GIT GKLLQYKEVH+ GQ+FHWY+EL+RVTLGPGKRGQWTW+N +S Y+ MFGPLFEDLRGPPKYM+SQI+ N ++ +IA+DDETEDAEAPFIQKLFGILRIY+T LE +R LGI+AG YL + SSK+PI++LL +TSFQLFF++LKKPFIKKKVQLVEIIS++CE +FA C L+ + S T IGI M+ LF I FLAQ+ E YALY QTK+L + F +GLK AS+GFLL+F+PQ+L++ ES + + +T CDRN SS ++R + RQ RE+AK+SFSKD + +DP Sbjct: 114 WTVDTIAPTAYITTPTSFTNASNVSVDITFTEPCWSQGGFGCASTNSCNLLVYGAGQVVPNTLNVIEPDLKFSVVVSLSTRDQYGRVILVMDKNFCSDPAGNKFKRTDNSSLFIHFDRRTVFADIRTHIPERLLQIDSEMRTVRATNSTENMEVYLYFNEPISNSSTDILNSLSISQGLLTPISGNSFGERRFGFQVRGISQTAIVTLSVRSDLILSWQGTPIAPVAPVTFLYDMQRPAVRLSTTSRMRTCDEQIPVLIKFVKPVFGFNSSHVSISGGQLQSFQEMSRSMYTVNIQARDDFVSVSIPENVTGDVAGNMNLQSNVLRLKHYTVPVTSEVLSILATSAFVVTSFAAGLLTVSTASLQSVGAYSRPSSLMTSDPARNLFRIACHIQFFALTRWLPITLPVEYYEFARGLQWSVPYFSLPWEMGSMHQFMMGPGSTTDPHSYSSKINDFGMKPGKYNVNK-AAALYGLPLSPMEYRSIFGSQDLLPEAQYIVDPKYSNGWRDFNRSMFWLAVIGGSLILLHALVLFVLRLRK-DREKKWSYGALVFPRFEIFLTILAIPCICKASVNVVKGGSSAGIAVGILLLGLVSFLLLQLFLFLSIGITLGKLLQYKEVHQVGQKFHWYEELVRVTLGPGKRGQWTWRNSRDSRYVVMFGPLFEDLRGPPKYMLSQIAVGNPNKHPDKVIATDDETEDAEAPFIQKLFGILRIYFTFLEFVKRVCLGIVAGTYL--KSLSSKSPIVVLLTITSFQLFFMLLKKPFIKKKVQLVEIISVACETGIFAACIALIGRNSSRNETAIGITMIALFFIAFLAQLVNEWYALYRQTKRLGAEDKSFCSGLKAASIGFLLFFIPQRLIRKLESGSALLDRVLKETGDVTSSCDRNRSSGSRSSGTDRPFTRQFRELAKSSFSKDSNVTTSDP 1034 HSP 2 Score: 90.8929 bits (224), Expect = 4.603e-15 Identity = 45/91 (49.45%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 377 CDDSQFTLKFFKAPHPFSHLNSAKFVFQVLGAAN-VTCSDCSITCKLDDGSASDCGGRKILYSGLQDGNHSFGVCVNGSQGAACTSYNWTV 646 CD S TLK P F++ N A F FQVL N C+DCS +CKLDD C G ++ Y+ L DG H+F VC NGS G C YNWTV Sbjct: 26 CDGSDVTLKLLTTPREFTNRNFANFAFQVLAGGNGDICADCSTSCKLDDYVPVVCEGGEVSYTQLLDGKHTFEVCTNGSLGVGCAHYNWTV 116
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Match: M1BJK8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018158 PE=4 SV=1) HSP 1 Score: 1023.08 bits (2644), Expect = 0.000e+0 Identity = 570/925 (61.62%), Postives = 724/925 (78.27%), Query Frame = 1 Query: 670 FIIYTVPPTAYITSSTPFTNALNVSVNISFTEXXXXXXXXXXXXVNDCNLLVYGAGQVVPSSLTVVEPNLKYLLLVSISSASRYGRLVLVMDTNFCTDAAGNPFARSQNSSFYVHYDQRNVFVDLRAHVPEKLLQLRSETRTIQATNNYNNLKVYLYFSAPXXXXXXXXXXXXXXXKGTLLPITGENHGNRRFGFMVXXXXXXXXXXXXFDANSTISRQGTLVSPVAPVTFLYDSQRTAVRLSTTCRMRTREHNIPISIKFMKPVFGFNSSLISISGGRLQSFHEISRSIYAAAIQADDDVVSVSVPENVTGDVAGNKNLASNVLRVRHYTIPXXXXXXXXXXTAIFLLTCFTAGLLTMSTASLQSVGAFXXXXXXXXXDPTRILFRSACHIQIFALSRWLPVTLPVEYYEFARSMEWSIPYFSLPWETGHVQPVMMGSSPTGTSNSFLSRTYDRVIS-RSFQPNKIAAAVYGSPLTPVEYRSFFESQSIIPEAEYISDGLHSNGWRNFDRSMFWLAVIGGSXXXXXXXXXXXXKYKKRDSEKQGSYGALIFPRFEIFLVIVALPCICQAAAALIAGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXGITFGKLLQYKEVHREGQQFHWYQELIRVTLGPGKRGQWTWKNEANSVYLTMFGPLFEDLRGPPKYMVSQISGSNLSRQGGPIIASDDETEDAEAPFIQKLFGILRIYYTMLESARRATLGILAGAYLNNNNTSSKTPIIILLCLTSFQLFFLVLKKPFIKKKVQLVEIISLSCEVAMFATCFVLLDKEFS---TTIGIFMLTLFLIGFLAQMSAEGYALYEQTKQLDTSENKFFTGLKIASVGFLLYFVPQKLMKSFESTFPVFGLCM-DTSTTGLPCDRN------SSSSERAWPRQLREMAKASFSKDGSKAPTDP 3411 + + T+PPTAYIT+ T FTNA NVSV+I+FTE C GGFRC+S N CNLLVYGAGQVVP++L V+EP+LK+ ++VS+S+ +YGR++LVMD NFC+D AGN F R+ NSS ++H+D+R VF D+R H+PE+ Q+ SETRT++ATN+ N++VYLYF+ PI NSSTEIL+SLSIS+G L PI+ + G RRFGF V IS AI+T+S ++ +S QGT ++PVAPVTFLYD QR AVRLSTT RMRT + IP+ IKF+KPVFGFNSS +SISGG+LQSF E+SRS+Y IQA DD VSVS+PENVTGDVAGN NL SN+LR++HYT+P IS +SI T+ F++T F AGLLT+STASLQSVGA+SRPSS ++SDP R LFR ACHIQ FAL+RWLPVTLPVEYYEFAR ++WS+PYFSLPWE + MMG T +S+ S+ D + + NK AAA+YG PL+P+EYRS F SQ ++PEA+YI D +SNGWR+F+RSMFWLAVIGGSLILLHA + F+L+ +K D EK+ SYGAL+FPRFEIFL I+A+PCIC+A+ ++ GG+ +G+ VGILLLG+V+FLLL+LFLFLS+GIT GKLLQYKEVH+ GQ+FHWY+EL+RVTLGPGKRGQWTWKN +S ++ MFGPLFEDLRGPPKYM+SQI+ N ++ +IA+DDETEDAEAP IQK+FGILRIY+T LE +R LGI+AG YL N SSK+PI++LL +TSFQLFF++LKKPFIKKKVQLVEIIS++CE +FA C VL+ ++ S T IGI ML LF I FL+Q+ E YALY QTK+L + F +GLK AS+GFLL+F+PQ+L++ ES + + +T CDRN SS ++R W +Q RE+AK+SFSKD + +DP Sbjct: 114 WTVDTIPPTAYITTPTSFTNASNVSVDITFTEPCWSQGGFRCASTNSCNLLVYGAGQVVPNTLNVIEPDLKFSVVVSLSTRDQYGRVILVMDKNFCSDPAGNKFKRTDNSSLFIHFDRRTVFADIRTHIPERQFQIDSETRTVRATNSTENMEVYLYFNEPISNSSTEILNSLSISQGLLTPISVNSFGERRFGFQVRGISQTAIVTLSVRSDLILSWQGTSIAPVAPVTFLYDMQRPAVRLSTTSRMRTCDEQIPVLIKFVKPVFGFNSSHVSISGGQLQSFQEMSRSMYTVNIQARDDFVSVSIPENVTGDVAGNMNLQSNILRLKHYTVPAISEALSILATSAFVVTSFAAGLLTVSTASLQSVGAYSRPSSLMTSDPARNLFRIACHIQFFALTRWLPVTLPVEYYEFARGLQWSVPYFSLPWEMASMHQFMMGPGSTTDPHSYGSKINDFGMKPGKYNVNK-AAALYGLPLSPMEYRSIFGSQDLLPEAQYIVDPKYSNGWRDFNRSMFWLAVIGGSLILLHALVLFVLRLRK-DREKKWSYGALVFPRFEIFLTILAIPCICKASVNVVKGGSSAGIAVGILLLGLVSFLLLALFLFLSIGITLGKLLQYKEVHQVGQKFHWYEELVRVTLGPGKRGQWTWKNSRDSRHIVMFGPLFEDLRGPPKYMLSQIAVGNPNKHPDKVIATDDETEDAEAPCIQKVFGILRIYFTFLEFVKRVCLGIVAGTYL--KNWSSKSPIVVLLTITSFQLFFMLLKKPFIKKKVQLVEIISVACETGIFAACIVLIGRDSSRNETAIGITMLALFFIAFLSQLGNEWYALYRQTKRLGAEDKSFCSGLKAASIGFLLFFIPQRLIRKLESGSALLDRVLKETGDVTSSCDRNRSSGSRSSGTDRPWHKQFRELAKSSFSKDSNVTTSDP 1034 HSP 2 Score: 95.1301 bits (235), Expect = 2.104e-16 Identity = 46/92 (50.00%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 374 NCDDSQFTLKFFKAPHPFSHLNSAKFVFQVLGAAN-VTCSDCSITCKLDDGSASDCGGRKILYSGLQDGNHSFGVCVNGSQGAACTSYNWTV 646 CD S+ TLK P F++ N A F FQVL N C+DCS +CKLDD + C G ++ Y+ L DGNH+F VC NGS G C YNWTV Sbjct: 25 RCDGSEVTLKLLTTPREFTNRNFANFAFQVLAGGNGDICADCSTSCKLDDYVPAVCEGGEVSYTQLLDGNHTFEVCTNGSLGVGCAHYNWTV 116
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Match: A0A0B2RC29_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_017462 PE=4 SV=1) HSP 1 Score: 1001.89 bits (2589), Expect = 0.000e+0 Identity = 574/930 (61.72%), Postives = 706/930 (75.91%), Query Frame = 1 Query: 682 TVPPTAYITSSTPFTNALNVSVNISFTEXXXXXXXXXXXXVNDCNLLVYGAGQVVPSSLTVVEPNLKYLLLVSISSASRYGRLVLVMDTNFCTDAAGNPFARSQNSSFYVHYDQRNVFVDLRAHVPEKLLQLRSETRTIQATNNYNNLKVYLYFSAPXXXXXXXXXXXXXXXKGTLLPITGENHGNRRFGFMVXXXXXXXXXXXXFDANSTISRQGTLVSPVAPVTFLYDSQRTAVRLSTTCRMRTREHNIPISIKFMKPVFGFNSSLISISGGRLQSFHEISRSIYAAAIQADDDVVSVSVPENVTGDVAGNKNLASNVLRVRHYTIPXXXXXXXXXXTAIFLLTCFTAGLLTMSTASLQSVGAFXXXXXXXXXDPTRILFRSACHIQIFALSRWLPVTLPVEYYEFARSMEWSIPYFSLPWETGHVQPVMMGSSPTGTSNSFLSRTYDRVISRSFQPN-KIAAAVYGSPLTPVEYRSFFESQSIIPEAEYISDGLHSNGWRNFDRSMFWLAVIGGSXXXXXXXXXXXXKYKKRDSEKQGSYGALIFPRFEIFLVIVALPCICQAAAALIAGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXGITFGKLLQYKEVHREGQQFHWYQELIRVTLGPGKRGQWTWKNEANSVYLTMFGPLFEDLRGPPKYMVSQISG--SNLSRQGGPIIASDDETEDAEAPFIQKLFGILRIYYTMLESARRATLGILAGAYLNNNNTSSKTPIIILLCLTSFQLFFLVLKKPFIKKKVQLVEIISLSCEVAMFATCFVLLDKEFS----TTIGIFMLTLFLIGFLAQMSAEGYALYEQTKQLDTSENKFFTGLKIASVGFLLYFVPQKLMKSFESTFPVFGLCMDTSTTGLPCDRNSSSS-------------ERAWPRQLREMAKASFSKDGSKAPTDP 3411 T PPTA +T+S FT++LNVSVNISFTE C GGGGF C SVN CNLLVYGAGQV+PSS +++PNL Y LLVS+SS +YGR +LVMD NFCTD AGN F R NS+ Y+H+D+R V+V++R HVPE+LLQL SETRT+QATN+++ LK+YLYFSAP+LNSSTEIL+S++IS+G+LL ++ GNRRFGF +ANIS+ AII++ F++ S ISRQGT VSP+APVTFLYD +R AV LST MRTREHN+ I +KF+KPVFGFNSS ISISGG L+SFHEISRS Y +QADDD+V +SVPENVT DVAGNKNLASN L+VRHY++P+ISSV+S F TA F+LT AG LT+STA+LQSVG F+R SS L DP R L R HIQ+FALSRWL V LPVE+YEFAR ++W++PYF +PWE + M+GS+P G+SN F+++ + + + +AA+VYGSPLT EY +FES ++ PEAEY+ D HS GW F RSMFWLAVI G L++LHAFL +LK+ KR+SEK +GAL FPRFE+FL+ +ALP +C+++ L+ GG+PSG+ VGILLL V +LL+LF+FLS+GITFGKLLQYKEVH+EG+ FHWYQEL+RVTLGPGKRGQWTWK + SV LT+FGPLFEDLRGPPKYM+SQI+G N Q IIASDDETEDAEAPFIQKLFGILRIYY LES RR +LGILAG ++ SK+P+II+L +TSFQLFF++LKKPFIKK+VQLVEIISL+CEV +FATC VLL K+ S T GIFML LFLIG+ AQ++ E YALY Q K LD E TGLK AS+GFLLYFVPQK +K E P + + P D S + + AW +QLR AK+SF ++ S DP Sbjct: 118 TTPPTADVTASASFTSSLNVSVNISFTEPCIGGGGFGCKSVNACNLLVYGAGQVIPSSFRIIQPNLTYSLLVSLSSTVQYGRAILVMDRNFCTDRAGNSFMRMPNSTVYIHFDRRKVYVNIRTHVPEELLQLDSETRTVQATNDHDRLKIYLYFSAPVLNSSTEILNSINISQGSLLLNNAKSLGNRRFGFTIANISSTAIISVDFNSESIISRQGTQVSPIAPVTFLYDIKRPAVMLSTY-SMRTREHNLQILVKFVKPVFGFNSSCISISGGLLKSFHEISRSTYMVELQADDDLVFISVPENVTRDVAGNKNLASNFLQVRHYSMPLISSVVSAFATACFVLTSIVAGFLTISTANLQSVGTFTRSSSFLVLDPARNLLRILSHIQVFALSRWLTVKLPVEFYEFARHLQWTVPYFPVPWEAEPMNLFMVGSNPFGSSN-FITKAPATIPKKFLDKSLNLAASVYGSPLTSSEYLQYFESGNMKPEAEYLLDSQHSAGWTEFYRSMFWLAVICGGLMVLHAFLLIVLKFGKRNSEKDKIHGALTFPRFEMFLIFLALPNVCKSSGVLLQGGSPSGLAVGILLLVFVGTVLLALFMFLSIGITFGKLLQYKEVHQEGETFHWYQELVRVTLGPGKRGQWTWKEQPKSVNLTIFGPLFEDLRGPPKYMLSQIAGGSGNPPSQRDCIIASDDETEDAEAPFIQKLFGILRIYYVFLESIRRVSLGILAGLFVLTQ--PSKSPVIIVLSMTSFQLFFMLLKKPFIKKRVQLVEIISLACEVTLFATCLVLLKKDISVSAETKYGIFMLVLFLIGYCAQITNEWYALYIQAKMLDPEEKSLLTGLKNASIGFLLYFVPQKCIKDLEKRLP-----QNDNVNEEPRDTASGADRSRRSSSRSSGTPDGAWLKQLRGFAKSSFGRERSGTRNDP 1038 HSP 2 Score: 91.2781 bits (225), Expect = 3.419e-15 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 374 NCDDSQFTLKFFKAPHPFSHLNSAKFVFQVLGAAN-VTCSDCSITCKLDDGSASDCGGRKILYSGLQDGNHSFGVCVNGSQGAACTSYNWTV 646 C S +KF KAPH FSH SA F FQV+ + + CS+C+++CKLDD S C K+ Y L+DGNH+F VC QG C +YNWTV Sbjct: 26 KCGGSDVHVKFLKAPHAFSHSKSASFAFQVINSGSGDPCSNCTLSCKLDDAITSVCTNGKVTYKSLEDGNHTFEVCTR-HQGLGCATYNWTV 116
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Match: A0A068V8N8_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_140 OS=Coffea canephora GN=GSCOC_T00005269001 PE=4 SV=1) HSP 1 Score: 1000.35 bits (2585), Expect = 0.000e+0 Identity = 576/923 (62.41%), Postives = 719/923 (77.90%), Query Frame = 1 Query: 676 IYTVPPTAYITSSTPFTNALNVSVNISFTEXXXXXXXXXXXXVNDCNLLVYGAGQVVPSSLTVVEPNLKYLLLVSISSASRYGRLVLVMDTNFCTDAAGNPFARSQNSSFYVHYDQRNVFVDLRAHVPEKLLQLRSETRTIQATNNYNNLKVYLYFSAPXXXXXXXXXXXXXXXKGTLLPITGENHGNRRFGFMVXXXXXXXXXXXXFDANSTISRQGTLVSPVAPVTFLYDSQRTAVRLSTTCRMRTREHNIPISIKFMKPVFGFNSSLISISGGRLQSFHEISRSIYAAAIQADDDVVSVSVPENVTGDVAGNKNLASNVLRVRHYTIPXXXXXXXXXXTAIFLLTCFTAGLLTMSTASLQSVGAFXXXXXXXXXDPTRILFRSACHIQIFALSRWLPVTLPVEYYEFARSMEWSIPYFSLPWETGHVQPVMMGSSPTGTSNSFLSRTYDRVISRSFQPNK----IAAAVYGSPLTPVEYRSFFESQSIIPEAEYISDGLHSNGWRNFDRSMFWLAVIGGSXXXXXXXXXXXXKYKKRDSEKQGSYGALIFPRFEIFLVIVALPCICQAAAALIAGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXGITFGKLLQYKEVHREGQQFHWYQELIRVTLGPGKRGQWTWKNEANSVYLTMFGPLFEDLRGPPKYMVSQISGSNLSRQGGPIIASDDETEDAEAPFIQKLFGILRIYYTMLESARRATLGILAGAYLNNNNTSSKTPIIILLCLTSFQLFFLVLKKPFIKKKVQLVEIISLSCEVAMFATCFVLLDKEFS----TTIGIFMLTLFLIGFLAQMSAEGYALYEQTKQLDTSENKFFTGLKIASVGFLLYFVPQKLMKSFESTFPVFGLCMDTSTT---GLPCDRNSSSSERAWPRQLREMAKASFSKDGSKAPTDP 3411 + T+PPTA++T+ST FTNA V V +SF+E C GGGF+CSS + CNLLVYGAGQVVP++L V+EPNLK+ L VS+S++ +YGR+V+VMD NFCTD+AGN F R+ NSS Y+H+D+R+VF +LR H+P K+LQ+ E RT+ ATN NLK+YLYF+ P+LNSS EI+ +++ S G+LLPI G + G RRFGF V +I ++AIIT+SFD+N +SRQGT VSP+APVTFLYDS R VRLSTT RT++ +IP+ IKFMKPVFGFNSS ISISGG L+SF ++S S Y +QADD +S+S+PEN+T DVAGN+NL SN+L VRHY++ V+S V+S F+TA F +T +G LT+STASLQSVGAF RP+ L+S+PTR LFR A HIQ++ALSRWL V+LPVEY EFAR ++WSIPYF LPWET P M G++ SF S+ + ++ + A VYG PL+P+EYR+FFE QS+IPEAE+I + ++GWR+F RSMFWLAVI GSL+LLH LF IL +K+++EK SYGALIFPRFEIFL+I+ALPCIC+A+AAL+ GG SG+VVGILLL VV FLLL+L LFLSVGIT GKLLQYKEVH+EG+ HWYQE+IRVTLGPGKRGQWTWKN++ S LTM GPLFEDLRGPPKYM+SQI+G N+ +Q IIASDDETEDAEAPFIQK+FGILRIYYT+LE A+R LGI+AGAY + N +S+TP I LLC+TSFQLFF+VLKKPFIKKKVQLVEIIS+SCE +FATC VLL K FS T IGIFML+LFL+ FLAQ+ + YALY Q K+LD + N F TGLKIA +GFLL F+PQ+ +K+ ES FP++ TT G + SS ER W RQLRE+A++SFSK+ + PTDP Sbjct: 117 VDTIPPTAFVTASTNFTNASKVLVYVSFSEPCIDGGGFQCSSPDACNLLVYGAGQVVPNTLNVIEPNLKFSLTVSLSTSVQYGRVVVVMDKNFCTDSAGNSFTRTGNSSLYIHFDRRSVFANLRTHIPAKVLQINREARTVLATNKTKNLKLYLYFTEPVLNSSAEIMKTVNTSLGSLLPIRGNDLGKRRFGFQVKDIPDMAIITVSFDSNQILSRQGTSVSPMAPVTFLYDSLRPTVRLSTTSHTRTKDESIPVLIKFMKPVFGFNSSHISISGGHLESFQKLSTSTYTMDVQADDGSISISIPENITEDVAGNRNLGSNILHVRHYSVSVVSLVLSSFITAAFAVTSLVSGFLTISTASLQSVGAFKRPTPLLTSEPTRSLFRMASHIQVYALSRWLAVSLPVEYSEFARGLQWSIPYFRLPWETLKFPPHMGGTNSPTNPYSFTSKHHYPGVAMDLTSEEQNFLKAPKVYGLPLSPMEYRTFFEGQSMIPEAEHIVNPQTAHGWRDFKRSMFWLAVIYGSLMLLHTLLFSILWLRKKNTEKNRSYGALIFPRFEIFLLILALPCICEASAALLKGGASSGMVVGILLLAVVFFLLLALLLFLSVGITLGKLLQYKEVHQEGEAIHWYQEIIRVTLGPGKRGQWTWKNDSKSTCLTMLGPLFEDLRGPPKYMLSQITGGNVQKQRDRIIASDDETEDAEAPFIQKVFGILRIYYTLLEVAKRVVLGIVAGAY--SENWASRTPTITLLCITSFQLFFMVLKKPFIKKKVQLVEIISVSCEFGIFATCLVLLYKGFSAKDETKIGIFMLSLFLLAFLAQLINQSYALYRQAKKLDPAGN-FLTGLKIALIGFLLLFIPQRWIKNLESKFPLYNTAEGEGTTTSSGDRRSSSRSSDERPWLRQLRELARSSFSKERAATPTDP 1036 HSP 2 Score: 91.2781 bits (225), Expect = 3.304e-15 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 383 DSQFTLKFFKAPHPFSHLNSAKFVFQVLGAANVTCSDCSITCKLDDGSASDCGGRKILYSGLQDGNHSFGVCVNGSQGAACTSYNWTV 646 +S+ +K K PH S + A F F+V+ +C +C CKLDDG A+ C R + Y+ LQDGNH+F VC N SQG CTSYNW+V Sbjct: 31 NSEVAVKLLKTPHAVSKRDYATFRFEVVVNGE-SCRECITNCKLDDGLATVCENRSVSYAQLQDGNHTFEVCTNASQGVGCTSYNWSV 117
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Match: R0FN45_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10016613mg PE=4 SV=1) HSP 1 Score: 998.423 bits (2580), Expect = 0.000e+0 Identity = 573/936 (61.22%), Postives = 715/936 (76.39%), Query Frame = 1 Query: 682 TVPPTAYITSSTPFTNALNVSVNISFTEXXXXXXXXXXXXVNDCNLLVYGAGQVVPSSLTVVEPNLKYLLLVSISSASRYGRLVLVMDTNFCTDAAGNPFARSQNSSFYVHYDQRNVFVDLRAHVPEKLLQLRSETRTIQATNNYNNLKVYLYFSAPXXXXXXXXXXXXXXXKGTLLPITGENHGNRRFGFMVXXXXXXXXXXXXFDANSTISRQGTLVSPVAPVTFLYDSQRTAVRLSTTCRMRTREHNIPISIKFMKPVFGFNSSLISISGGRLQSFHEISRSIYAAAIQADDDVVSVSVPENVTGDVAGNKNLASNVLRVRHYTIPXXXXXXXXXXTAIFLLTCFTAGLLTMSTASLQSVGAFXXXXXXXXXDPTRILFRSACHIQIFALSRWLPVTLPVEYYEFARSMEWSIPYFSLPWETGHVQPVMMGSSPTGTSNSFLSRTYDRVISRSFQPNKIAAAVYGSPLTPVEYRSFFESQSIIPEAEYISDGLHSNGWRNFDRSMFWLAVIGGSXXXXXXXXXXXXKYKKRDSEKQGSYGALIFPRFEIFLVIVALPCICQAAAALI------AGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXGITFGKLLQYKEVHREGQQFHWYQELIRVTLGPGKRGQWTWKNEANSVYLTMFGPLFEDLRGPPKYMVSQISGSN-LSRQGGPIIASDDETEDAEAPFIQKLFGILRIYYTMLESARRATLGILAGAYLNNNNTSSKTPIIILLCLTSFQLFFLVLKKPFIKKKVQLVEIISLSCEVAMFATCFVLLDKEF----STTIGIFMLTLFLIGFLAQMSAEGYALYEQTKQLDTSENKFFTGLKIASVGFLLYFVPQKLMKSFESTFPVFGLCMDTSTTG-----LPCDRNSSSS--------ERAWPRQLREMAKASFSKD--GSKAPTDP 3411 TV PTA++T+S PFT+A NVSVNI+FTE C GG GFRCSSVN C+LLVYGAGQV+PSSLTV++ LKY LLV +S ++YGR+VLVM+ N C+D AGN F R+ S F+VH+D+RNVFVDLR HVPEKLL+L ++TRT+QATN+ + L VYLYFS P+LNSSTEIL LS ++G LLP+ G+ +GNRRF FMV N S AI+T++ D++S SR GT SP AP+TFLYD++R V L+TT MRTR+H IP+ IKFMKPVFGFNSS +S+SGG L SF E+S SIY ++A+ +SV VPENVT DVAGNKNLASN+L V+HY++PV+SSVIS T IFL+T F AGLLT+ST SL S+GAF RPS L SDPTR LFR+ACHIQ FALSRWLPVTLPV+YYEF R ++W IPYF LPWET H + +M+ +SP +S++S+T + +I + Q + A +VYG PLT +EYR FFE+ ++ PEAE++ HS WR+F R MFWLA+IGGSL+LLH FL ILK+KK +EK+ S+GA +FPRFE+FL+I+ALP IC+AA +LI G + V+VGIL+L VVA LLL+LF+FLS GITFGKLLQYKE+H+EGQ FHWYQELIRVTLGPGKRGQWTWK E NSVYLT GP+FEDLRGPPKYM++QISGSN L ++ IIASDDE EDAEAP IQKLFGILRIYYT LE+ +R LGI+AGAY +N ++KTPI++LL +TSFQLFFLVLKKPFIKKKVQLVEIIS++C+V +FA+C LL KEF + +GIFM+ LFLIGF+AQM E Y+LY+QTK+LD F +GLK+ +G +P K+MK S P L +++ G P +R +SS ++ W RQ+REMAKASF++D SK P+DP Sbjct: 118 TVSPTAFVTASMPFTSAKNVSVNITFTEPCVGGRGFRCSSVNACDLLVYGAGQVIPSSLTVLDQFLKYSLLVGLSPDAQYGRIVLVMNKNVCSDKAGNNFKRALGSRFFVHFDRRNVFVDLRTHVPEKLLKLNNQTRTVQATNDNDKLNVYLYFSEPVLNSSTEILRLLSTNQGDLLPVDGKTNGNRRFAFMVTNTSRRAIVTVTLDSDSIRSRHGTPASPTAPLTFLYDTERPHVLLNTTSGMRTRKHTIPVWIKFMKPVFGFNSSFVSVSGGYLDSFEELSGSIYIVYVKANTSTISVKVPENVTQDVAGNKNLASNILEVKHYSVPVLSSVISWISTYIFLVTSFVAGLLTLSTTSLYSLGAFPRPSPYLISDPTRNLFRTACHIQFFALSRWLPVTLPVDYYEFVRGIQWIIPYFPLPWETKHKEQIMVATSPYIGPHSYISKTQNDMI--NLQTSTNAESVYGLPLTAMEYRLFFETSNLKPEAEHVLGLPHSTVWRDFYRIMFWLAIIGGSLVLLHIFLSLILKFKKAHTEKKRSFGAFVFPRFELFLLILALPSICKAARSLIQGYFKHQGAAEASVIVGILVLCVVAVLLLALFIFLSFGITFGKLLQYKEIHQEGQTFHWYQELIRVTLGPGKRGQWTWKTEKNSVYLTRLGPVFEDLRGPPKYMLTQISGSNPLKQRDDRIIASDDENEDAEAPCIQKLFGILRIYYTFLETVKRVCLGIIAGAYFDNE--TAKTPIVVLLSITSFQLFFLVLKKPFIKKKVQLVEIISIACQVGVFASCLTLLTKEFPEASAKKLGIFMVMLFLIGFIAQMCNEWYSLYKQTKRLDQINRSFLSGLKMFIIGIAALILPHKMMK---SKIPAAQLEGRSNSNGGIPFSTPENRYMNSSGSRSSGSLDKPWLRQIREMAKASFTRDRSNSKVPSDP 1046 HSP 2 Score: 87.8113 bits (216), Expect = 4.075e-14 Identity = 41/90 (45.56%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 377 CDDSQFTLKFFKAPHPFSHLNSAKFVFQVLGAANVTCSDCSITCKLDDGSASDCGGRKILYSGLQDGNHSFGVCVNGSQGAACTSYNWTV 646 C S+ ++KF KAP S +SAKF FQ N TCS C CKLDD + DC R++ Y+ L DG+H+ VC N G C +Y+WTV Sbjct: 27 CYGSELSVKFLKAPPATSRFSSAKFSFQAFEDGNRTCSSCRFHCKLDDRFSFDCHQRRVSYTKLLDGDHTLEVCANKMHGFGCNTYHWTV 116
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Match: V7B0R0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G176900g PE=4 SV=1) HSP 1 Score: 992.26 bits (2564), Expect = 0.000e+0 Identity = 578/933 (61.95%), Postives = 713/933 (76.42%), Query Frame = 1 Query: 682 TVPPTAYITSSTPFTNALNVSVNISFTEXXXXXXXXXXXXVNDCNLLVYGAGQVVPSSLTVVEPNLKYLLLVSISSASRYGRLVLVMDTNFCTDAAGNPFARSQNSSFYVHYDQRNVFVDLRAHVPEKLLQLRSETRTIQATNNYNNLKVYLYFSAPXXXXXXXXXXXXXXXKGTLLPITGENHGNRRFGFMVXXXXXXXXXXXXFDANSTISRQGTLVSPVAPVTFLYDSQRTAVRLSTTCRMRTREHNIPISIKFMKPVFGFNSSLISISGGRLQSFHEISRSIYAAAIQADDDVVSVSVPENVTGDVAGNKNLASNVLRVRHYTIPXXXXXXXXXXTAIFLLTCFTAGLLTMSTASLQSVGAFXXXXXXXXXDPTRILFRSACHIQIFALSRWLPVTLPVEYYEFARSMEWSIPYFSLPWETGHVQPVMMGSSPTGTSNSFLSRTYDRVISRSFQ--PNK-------IAAAVYGSPLTPVEYRSFFESQSIIPEAEYISDGLHSNGWRNFDRSMFWLAVIGGSXXXXXXXXXXXXKYKKRDSEKQGSYGALIFPRFEIFLVIVALPCICQAAAALIAGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXGITFGKLLQYKEVHREGQQFHWYQELIRVTLGPGKRGQWTWKNEANSVYLTMFGPLFEDLRGPPKYMVSQISG--SNLSRQGGPIIASDDETEDAEAPFIQKLFGILRIYYTMLESARRATLGILAGAYLNNNNTSSKTPIIILLCLTSFQLFFLVLKKPFIKKKVQLVEIISLSCEVAMFATCFVLLDKEFS----TTIGIFMLTLFLIGFLAQMSAEGYALYEQTKQLDTSENKFFTGLKIASVGFLLYFVPQKLMKSFESTFPVFG----LCMDTSTTG----LPCDRNSSSSERAWPRQLREMAKASFSKDGSKAPTDP 3411 T PPTA++++ST FT++LNVSVNISFTE C GGGGF C SVN CNLLVYGAGQV+PSS +++PNL Y LLVS+S ++GR +LVMD NFCTD AGN F R NSS +H+D+R V+V++R VPE+LLQL SETRT+QATN ++ LK+YLYFSAP+LNSSTEIL+S++IS+G+LLP ++ G+RRFGF+VANIS+ AII+I F++ S I+RQGT VSP+AP+TFLYD+ R AV LST MRTREHN+ I IKF+KPVFGFNSS ISISGG L+SFHEI R Y + A+D +V VSVPENVT DVAGNKNLASN L+VR Y++P+ISSV+S F TA F+LT AG LT+STASLQS+G F+R SS L DP R L R HIQ+FALSRWL V LPVE+YEFA+ ++W+IPYF++PWE+ + M+GS+P G S +VI+++ PNK +AA+VYGSPLT EY+ +FES+++ PEAEYI D S+GW F R MFWLAVI G L++LH FL +LK+ KR+SEK +GAL FPRFEIFL+ +ALP IC+++A LI GG+PSG+ VG LL V +LL+LFLFLS+GITFGKLLQYKEVH+EG FHWYQEL+RVTLGPGKRGQWTWK + SVYLT+FGP+FEDLRGPPKYM+SQISG N Q IIASDDETEDAEAPFIQKLFGILRIYY +LES RR +LGIL+G +++ SSKTP+II+L +TSFQLFF++LKKPFIKK+VQLVEIISL+CEV +FATCF+LL K+FS T GIFML LFL+G+ AQ+ E YALY QTK LD E TGLK AS+GFLLYF+PQK +K FP G DT++ G L R+S + + AW +QLRE AK+S S++ S DP Sbjct: 116 TTPPTAHVSASTSFTSSLNVSVNISFTEPCIGGGGFGCKSVNGCNLLVYGAGQVIPSSFRILQPNLTYSLLVSLSPTVQHGRAILVMDKNFCTDLAGNSFMRMPNSSVIIHFDRRKVYVNIRTRVPEELLQLNSETRTVQATNEFDRLKIYLYFSAPVLNSSTEILNSINISQGSLLPHNSKSLGDRRFGFLVANISSTAIISIDFNSESIITRQGTQVSPIAPITFLYDTTRPAVMLSTY-SMRTREHNLQILIKFVKPVFGFNSSCISISGGLLKSFHEIRRDTYMVELLAEDGLVFVSVPENVTRDVAGNKNLASNFLQVRRYSMPLISSVVSAFATASFVLTSIAAGFLTISTASLQSIGTFTRSSSFLVFDPARNLLRILSHIQVFALSRWLAVKLPVEFYEFAKHLQWTIPYFTVPWESETMNLFMVGSNPFGAS---------KVITKAPATIPNKLLVKSLNLAASVYGSPLTSSEYQQYFESENMKPEAEYILDSQPSSGWTEFYRGMFWLAVICGGLMVLHIFLLIVLKFGKRNSEKHRIHGALKFPRFEIFLIFLALPNICKSSAVLIQGGSPSGIAVGTLLFVFVCIVLLALFLFLSIGITFGKLLQYKEVHQEGLTFHWYQELVRVTLGPGKRGQWTWKEQPRSVYLTIFGPMFEDLRGPPKYMLSQISGGTGNPPSQRDRIIASDDETEDAEAPFIQKLFGILRIYYVLLESIRRVSLGILSGLFVSTQ--SSKTPVIIMLSMTSFQLFFMLLKKPFIKKRVQLVEIISLACEVTLFATCFLLLKKDFSVRAETKTGIFMLVLFLVGYCAQIINEWYALYVQTKMLDPEEKSLLTGLKNASIGFLLYFIPQKCIKDLVKRFPENGNGNEESRDTASGGDRSRLSSSRSSGTPDGAWLKQLREFAKSSISRERSGV-NDP 1035 HSP 2 Score: 85.5001 bits (210), Expect = 1.835e-13 Identity = 44/92 (47.83%), Postives = 54/92 (58.70%), Query Frame = 2 Query: 374 NCDDSQFTLKFFKAPHPFSHLNSAKFVFQVLGAANV-TCSDCSITCKLDDGSASDCGGRKILYSGLQDGNHSFGVCVNGSQGAACTSYNWTV 646 C S +KF K P FSH NSA F FQVL ++ TCS+C++ CKLDD C K Y L+DGNH+F VC +G C +YNWTV Sbjct: 24 KCGGSDVYVKFLKFPRAFSHSNSATFAFQVLNTSSGGTCSNCTLRCKLDDEITRVCKNGKATYRSLRDGNHTFEVCTR-HEGLGCATYNWTV 114 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0092163 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092163 ID=g.barbadense_cottongen_reftransV1_0092163; Name=g.barbadense_cottongen_reftransV1_0092163; organism=Gossypium barbadense; type=contig; length=3688bpback to top |