g.barbadense_cottongen_reftransV1_0092162, g.barbadense_cottongen_reftransV1_0092162 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GUX4_ARATH (Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 OS=Arabidopsis thaliana GN=GUX4 PE=3 SV=1) HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0 Identity = 260/489 (53.17%), Postives = 349/489 (71.37%), Query Frame = -2 Query: 173 KKEIKIGLVNINSNEEIQYQLPGSVV-STVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALEKYQ-DLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1633 +K I++G +NI+ E Y+ G +V +HV D + K W+ +P I+E CPEIP+P E ++DV+VA++PC GWS G+RDVF LQVNL AN+ V+SG T V +AVY VF+GSCGPM EIF C++ + +VED+ VYKP L RLKQ +LMP GSCQ+A + + G+EAWR D+ K + + + AY TVLH+SE YVCGA+ALAQSI ++ S +D+ILLHD IT +SL+GL AAGW+ RLI+ IRSPF+ KDS+NEWN+S LR+W +T YDK+VFIDAD ++ +D LF +PQLSA+ NDK LFN G+MV+EPS CMF+DLM K +++SYNG QG+LNE+F+WWHRL +VN +K F+ E+ R+ + + + LH+LGLKPW+CYRDYDCNWD + FASD HEKWW+VYD+M E L+ YCGL ++M R++KWR IA++ PD HW+I V DPR+ NL Sbjct: 69 EKRIQVGFLNIDEKERESYEARGPLVLKNIHVPLDHIPKNVTWKSLYPEWINEEASTCPEIPLPQPEGSDANVDVIVARVPCDGWSANKGLRDVFRLQVNLAAANLAVQSGLRT--VNQAVYVVFIGSCGPMHEIFPCDERVMRVEDYWVYKPYLPRLKQKLLMPVGSCQIAPSFAQFGQEAWRPKHEDNLASKAVTALPRRLRVAYVTVLHSSEAYVCGAIALAQSIRQSGSHKDMILLHDHTITNKSLIGLSAAGWNLRLIDRIRSPFSQKDSYNEWNYSKLRVWQVTDYDKLVFIDADFIILKKLDHLFYYPQLSASGNDKVLFNSGIMVLEPSACMFKDLMEKSFKIESYNGGDQGFLNEIFVWWHRLSKRVNTMKYFD-EKNHRRHDLPENVEGLHYLGLKPWVCYRDYDCNWDISERRVFASDSVHEKWWKVYDKMSEQLKGYCGLNKNMEKRIEKWRRIAKNNSLPDRHWEIEVRDPRKTNL 554
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GUX5_ARATH (Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 OS=Arabidopsis thaliana GN=GUX5 PE=2 SV=1) HSP 1 Score: 506.138 bits (1302), Expect = 8.742e-171 Identity = 258/507 (50.89%), Postives = 356/507 (70.22%), Query Frame = -2 Query: 176 LDLLQEEINSKKEIKIGLVNINSNEEIQYQLPG-SVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQ----NCPEIPMPALEKYQ-DLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAW---RYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGR--RQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYN 1663 L L++ + +K+I++GL+NI NE Y+ G S++ VHV D + W FP IDE+ +CPE+P+P +E + D+DVVV K+PC G+S K G+RDVF LQVNL AN++VESG V R VY VF+GSCGPM EIFRC++ +++V D+ VY+P+L RLKQ +LMPPGSCQ+A P G+ EAW + + E+ + ++A Q+ AY T+LH+SE YVCGA+ALAQSI ++ ST+D+ILLHD++IT SL+GL AGW R + IRSPF+ K S+NEWN+S LR+W +T YDK+VFIDAD ++ NID+LF +PQLSAA N+K LFN GVMV+EPS C+FEDLM+K ++ SYNG QG+LNE F+WWHRL ++N +K F G+E R + + + + +H+LGLKPW CYRDYDCNWD + + +AS+ H +WW+VYD+MP+ L+ YCGL M ++KWR +A+ P+ HWKI + DPR+ N Sbjct: 64 LRLIRNYLPDEKKIRVGLLNIAENERESYEASGTSILENVHVSLDPLPNNLTWTSLFPVWIDEDHTWHIPSCPEVPLPKMEGSEADVDVVVVKVPCDGFSEKRGLRDVFRLQVNLAAANLVVESG--RRNVDRTVYVVFIGSCGPMHEIFRCDERVKRVGDYWVYRPDLTRLKQKLLMPPGSCQIA-PLGQG--EAWIQDKNRNLTSEKTTLSSFTA--QRVAYVTLLHSSEVYVCGAIALAQSIRQSGSTKDMILLHDDSITNISLIGLSLAGWKLRRVERIRSPFSKKRSYNEWNYSKLRVWQVTDYDKLVFIDADFIIVKNIDYLFSYPQLSAAGNNKVLFNSGVMVLEPSACLFEDLMLKSFKIGSYNGGDQGFLNEYFVWWHRLSKRLNTMKYF-GDESRHDKARNLPENLEGIHYLGLKPWRCYRDYDCNWDLKTRRVYASESVHARWWKVYDKMPKKLKGYCGLNLKMEKNVEKWRKMAKLNGFPENHWKIRIKDPRKKN 562
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GUX2_ARATH (UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 OS=Arabidopsis thaliana GN=GUX2 PE=2 SV=1) HSP 1 Score: 431.409 bits (1108), Expect = 2.413e-141 Identity = 239/524 (45.61%), Postives = 325/524 (62.02%), Query Frame = -2 Query: 182 SNQRFRNLDLLQEEINSKK--EIKIGLVNINSNEEIQYQLPGSVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQ----NCPEIPMPALEKYQDLDVVVAKLPC----KGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSAD--HERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILD-------EISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTE----HMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQ 1684 SNQ EEI ++ + KIG+VN+ + ++ G TVH+ F+RVSK KW+D FP IDE ++ CPEIPMP E + LD+VV KLPC +GW R+V LQVNLV AN+ + G K V +F C PM EIFRC+DL ++ D +Y+PE+ RL+Q + +P GSC LA P W D ++ K+ + ++EAY TVLH+SE YVCGA+ LAQS+++TN+ RDLILLHD++I+ L L AAGW R I IR+P A+KDS+NE+N+S R+W LT YDKV+FIDAD++V N+D LF FPQ+SA ND ++N G+MVIEPS C F +M + E+ SYNG QG+LNE+F+WWHRLP +VNFLK+F + + + ++ +H+LG KPW+CYRDYDCN+D + +ASD AH +WW+V+D M + LQ +C LT+ +NW +K AR D HWKI VTDPR+ Sbjct: 87 SNQTKLEAPSFMEEILTRGLGKTKIGMVNMEECDLTNWKRYGE---TVHIHFERVSKLFKWQDLFPEWIDEEEETEVPTCPEIPMPDFESLEKLDLVVVKLPCNYPEEGWR-----REVLRLQVNLVAANLAAKKGKTDWRWKSKV--LFWSKCQPMIEIFRCDDLEKREADWWLYRPEVVRLQQRLSLPVGSCNLALPL-------WAPQGVDKVYDLTKIEAETKRPKREAYVTVLHSSESYVCGAITLAQSLLQTNTKRDLILLHDDSISITKLRALAAAGWKLRRIIRIRNPLAEKDSYNEYNYSKFRLWQLTDYDKVIFIDADIIVLRNLDLLFHFPQMSATGNDVWIYNSGIMVIEPSNCTFTTIMSQRSEIVSYNGGDQGYLNEIFVWWHRLPRRVNFLKNFWSNTTKERNIKNNLFAAEPPQVYAVHYLGWKPWLCYRDYDCNYDVDEQLVYASDAAHVRWWKVHDSMDDALQKFCRLTKKRRTEINWERRK----ARLRGSTDYHWKINVTDPRR 589
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GUX1_ARATH (UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 OS=Arabidopsis thaliana GN=GUX1 PE=2 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 4.186e-117 Identity = 212/523 (40.54%), Postives = 303/523 (57.93%), Query Frame = -2 Query: 185 FRNLDLLQEEI-----NSKKEIKIGLVNINSNEEIQYQL------PGSVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQN----CPEIPMPALEKYQDLDVVVAKLPCK---GWSGKSGMRDVFMLQVNLVVANILVE-SGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDF----EGEEGRRQEKILDE----ISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPR 1672 F +LD+ +++ N ++ IG++N +SNE +++ G V + D K W+ +P IDE Q+ CP IP + + LD++V KLPC+ WS RDV L + L A + G+ V FV C P+ +FRC+DL+ + D +YKP L L+ + +P GSC+L+ P G + + ++EAYAT+LH++ YVCGA+A AQSI ++ STRDL++L D+NI+ GL+AAGW R I IR+P A+KD++NEWN+S R+W LT YDK++FIDAD+L+ NID+LF P++SA N+ TLFN GVMVIEP C F+ LM + E++SYNG QG+LNEVF WWHR+P +NFLK F E + R++ ++ + VLH+LG+KPW+CYRDYDCN++ + FA+D AH KWW V+D MP+ L +C L +L+ R A + D HWKI V DPR Sbjct: 116 FSDLDINWDDVTKTLENIEEGRTIGVLNFDSNEIQRWREVSKSKDNGDEEKVVVLNLDYADKNVTWDALYPEWIDEEQETEVPVCPNIPNIKVPTRR-LDLIVVKLPCRKEGNWS-----RDVGRLHLQLAAATVAASAKGFFRGHV------FFVSRCFPIPNLFRCKDLVSRRGDVWLYKPNLDTLRDKLQLPVGSCELSLPLGIQDRPSL----------------GNPKREAYATILHSAHVYVCGAIAAAQSIRQSGSTRDLVILVDDNISGYHRSGLEAAGWQIRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFSMPEISATGNNGTLFNSGVMVIEPCNCTFQLLMEHINEIESYNGGDQGYLNEVFTWWHRIPKHMNFLKHFWIGDEDDAKRKKTELFGAEPPVLYVLHYLGMKPWLCYRDYDCNFNSDIFVEFATDIAHRKWWMVHDAMPQELHQFCYLRSKQKAQLEYDRRQAEAANYADGHWKIRVKDPR 610
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GUX3_ARATH (Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 OS=Arabidopsis thaliana GN=GUX3 PE=2 SV=1) HSP 1 Score: 367.851 bits (943), Expect = 1.599e-116 Identity = 205/507 (40.43%), Postives = 302/507 (59.57%), Query Frame = -2 Query: 185 DLLQEEINSKKEIK-IGLVNINSNEEIQY-QLPGSVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQ----NCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDF-EGEE---GRRQEKILDE----ISVLHFLGL-KPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPR 1660 +L+++ + + E + IGL+N+N NE ++ ++ S V + D +K WE +P IDE ++ CP +P+ + +D+V+AKLPC SGK RDV L + L A + S + V+ + V C P+ +F ++L+ + + +YKP L +L+Q + +P GSC+L+ P + K YSA +KEAYAT+LH+++ YVCGA+A AQSI + STRDL++L DE I+ GL AAGW ++ IR+P A +++NEWN+S R+W LT Y K++FIDAD+L+ NID+LF FP++SA N+ TLFN G+MV+EPS F+ LM + E+ SYNG QG+LNE+F WWHR+P +NFLK F EG+E + + + + VLH+LG KPW+C+RDYDCNW+ + Q FASD+AH+ WW+V+D MPE L +C L +L+ R A D HWKI + D R Sbjct: 91 NLVEKHVFGRSEYQGIGLINLNDNEIDRFKEVTKSDCDHVALHLDYAAKNITWESLYPEWIDEVEEFEVPTCPSLPLIQIPGKPRIDLVIAKLPCDK-SGKWS-RDVARLHLQLAAARVAASSKGL-----HNVHVILVSDCFPIPNLFTGQELVARQGNIWLYKPNLHQLRQKLQLPVGSCELSVPL----------------QAKDNFYSAGAKKEAYATILHSAQFYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKIQMFQRIRNPNAVPNAYNEWNYSKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFPEISATGNNATLFNSGLMVVEPSNSTFQLLMDNINEVVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEPEIKKMKTSLFGADPPILYVLHYLGYNKPWLCFRDYDCNWNVDIFQEFASDEAHKTWWRVHDAMPENLHKFCLLRSKQKAQLEWDRRQAEKGNYKDGHWKIKIKDKR 574
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GUX6_ARATH (Inositol phosphorylceramide glucuronosyltransferase 1 OS=Arabidopsis thaliana GN=IPUT1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.201e-19 Identity = 58/170 (34.12%), Postives = 93/170 (54.71%), Query Frame = -2 Query: 542 KYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVF 1051 + + K AY T+L+ ++++ G L +SI T ST+D++ L + ++ S LKA GW I+ + +P + ++ L+I+ +T Y KVV++DAD +V NI+ LF + A N GVMV+EPS +F D+M KV + SY G QG+LN + Sbjct: 23 SFGSESSKVAYVTLLY-GDEFLLGVRVLGKSIRDTGSTKDMVALVSDGVSDYSKKLLKADGWKVEKISLLANPNQVHPTRFWGVYTKLKIFNMTDYKKVVYLDADTIVVKNIEDLFKCSKFCANLKHSERLNSGVMVVEPSEALFNDMMRKVKTLSSYTGGDQGFLNSYY 191
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GLYG2_HUMAN (Glycogenin-2 OS=Homo sapiens GN=GYG2 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.799e-19 Identity = 83/257 (32.30%), Postives = 118/257 (45.91%), Query Frame = -2 Query: 323 EAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSP------FADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPND--KTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWW-----HR-LPFQVNFLKDFEGEEGRRQEKILDEISVLHFLG-LKPWMCYRDYDCNWDKEGM--QRFASDKAHEK-----WWQVY 1027 +A+ T L T++ Y GA+ L QS+ R TR L++L ++ V L + +N I S F + + L W LT Y K VF+DAD LV +N+D LF + SAAP+ FN GV V +PSL + L+ +E S++G+ QG LN F W H+ LPF N + ++ V+HFLG +KPW +Y N + Q AS H+ WW VY Sbjct: 37 QAFVT-LATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIEVNLIDSADYIHLAFLKRPELG-LTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKPW----NYKYNPQSGSVLEQGSASSSQHQAAFLHLWWTVY 287
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GYG1_CAEEL (Glycogenin-1 OS=Caenorhabditis elegans GN=gyg-1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.045e-16 Identity = 65/213 (30.52%), Postives = 94/213 (44.13%), Query Frame = -2 Query: 416 VLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEW-----NFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPND--KTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWW------HRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLG-LKPW 1012 L T+++Y GA+ L S+ +TR + L ++ L+ D +++ S +D E F+ L W LT Y K VF+DAD LV N D LF P SAA + FN GV V P+ + L+ + SY+G QG LN+ F W HRLPF N ++ ++HF+G +KPW Sbjct: 7 TLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVDVFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFSAASDIGWPDSFNSGVFVYVPNNETYRQLVDFAVTHGSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAFYTYAAAYKRYGANTKIVHFIGSVKPW 219
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GOLS6_ARATH (Galactinol synthase 6 OS=Arabidopsis thaliana GN=GOLS6 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.533e-16 Identity = 79/283 (27.92%), Postives = 125/283 (44.17%), Query Frame = -2 Query: 317 KEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEW----NFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQL--------------SAAPNDK-----------------------TLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFI-WWHRLPFQVNFLKDFEGEEGRRQEKI-LDEISVLHFL--GLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDE 1030 K AY T L ++DY G V LA+ + + S L++ ++ E L A G R I + P +K ++ N+S LRIW Y+K++++D D+ VF+NID LF P+ S P K FN G++V EP+L +EDL+ V + Q +LNE F + +P N + R E I LD+ISV+H+ G KPW + + + + D+E ++ +KWW +Y++ Sbjct: 24 KRAYVTFLAGNKDYWMGVVGLAKGLRKVKSAYPLVVAILPDVPEEHRQILLAQGCIIREIEPVYPP-ENKTGYSMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFSNIDHLFDTPRGYLYAVKDCFCEISWSKTPQFKIGYCQQCPEKVTWPVESLGSPPPVYFNAGMLVFEPNLLTYEDLLRVVQITTPTYFAEQDFLNEYFTDIYKPIPSTYNLVM---AMLWRHPEHIDLDQISVIHYCANGSKPWR-FDETEEHMDREDIKMLV-----KKWWDIYED 296
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GLYG_MOUSE (Glycogenin-1 OS=Mus musculus GN=Gyg1 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 6.565e-16 Identity = 67/218 (30.73%), Postives = 101/218 (46.33%), Query Frame = -2 Query: 416 EAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNE-----WNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDK--TLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWW------HRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLG-LKPW 1027 +A+ T L T++ Y GA+ L S+ + +TR +++L ++ L+ D +++ + S + + + + L W LT Y K VF+DAD LV +NID LF +LSAAP+ FN GV V +PS+ + L+ E S++G QG LN F W LPF N + V+HFLG KPW Sbjct: 4 QAFVT-LTTNDAYAKGALVLGSSLKQHRTTRRMVVLTSPQVSDSMRKVLETVFDDVIMVDVLDSGDSAHLTLMKRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDITKHLPFVYNLSSISIYSYLPAFKAFGKNAKVVHFLGRTKPW 220
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: A0A087H0F0_ARAAL (Hexosyltransferase OS=Arabis alpina GN=AALP_AA4G012800 PE=3 SV=1) HSP 1 Score: 531.946 bits (1369), Expect = 4.985e-179 Identity = 252/488 (51.64%), Postives = 346/488 (70.90%), Query Frame = -2 Query: 173 KKEIKIGLVNINSNEEIQYQLPGSVV-STVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1633 +K I++G +NI+ E ++ G ++ VHV D + W+ FP IDE CPEIP+P D+DV+VA++PC GWS G+RDVF LQVNL VAN+ V+SG V VY VF+GSCGPM EIFRC++ +R+V D+ VY+ L RLKQ +LMP GSC++A P+ + G+EAWR + ++ + + S + + AY TVLH+SE YVCGA+ALAQSI ++ ST+D+ILLHD++IT SL+GL +AGW+ RLI+ IRSPF++K+S+NEWN+S LR+W +T YDK+VFID+D ++ +D LF +PQLSA+ ND+ LFN GVMV+EPS C+F+DL+ K L++ SYNG QG+LNE+F+WWHRL VN +K F+ E+ +R + + + +H+LGLKPW+CYRDYDCNWD FASD HEKWW VYD+M E L+ YCGL + M R++KWR IA++ P HW+I V DPR+ NL Sbjct: 70 EKRIRVGFLNIDEQERESFEARGPLILGNVHVSLDPLPVNVTWKSLFPEWIDEELSKCPEIPLPD----ADVDVIVARVPCDGWSENKGLRDVFRLQVNLAVANLAVQSG--LRRVDPTVYIVFIGSCGPMHEIFRCDERVRRVGDYWVYRSNLPRLKQKLLMPVGSCRVASPFAQLGQEAWRPKNEENHTSQAVTASPRRLRVAYVTVLHSSEAYVCGAIALAQSIRQSGSTKDMILLHDQSITNRSLLGLSSAGWNLRLIDRIRSPFSEKNSYNEWNYSKLRVWQVTDYDKLVFIDSDFIILRKLDHLFYYPQLSASGNDRVLFNSGVMVLEPSPCLFKDLIEKSLKIGSYNGGDQGFLNEIFVWWHRLSKSVNTMKYFD-EKSKRAHDLSENLEGVHYLGLKPWICYRDYDCNWDMSEKHVFASDTVHEKWWTVYDKMSEQLKGYCGLNKQMEKRIEKWRRIAKNNSLPGRHWEIEVKDPRKKNL 550
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: V4JWD7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10024070mg PE=4 SV=1) HSP 1 Score: 531.561 bits (1368), Expect = 7.969e-179 Identity = 258/508 (50.79%), Postives = 353/508 (69.49%), Query Frame = -2 Query: 173 PPSNQRFRNLDLLQEEINSKKEIKIGLVNINSNEEIQYQLPGSVV-STVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALEKYQ-DLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1690 P N+ R L L++ + K+ I++G +N++ E Y+ G ++ VHV D + W+ FP IDE CPEIP+P E D+DV+VA++PC GWS G+RDVF LQVNL VAN+ V SG V VY VF+G CGPM EIF+C++ +R+V D+ VYKP L RLKQ +LMP GSC +A P+ + G+E WR + D+ + + +Q+ AY TVLH+SE YVCGA+ALAQSI ++ S +D++LLHD++IT SL+GL +AGW+ RLI+ IRSPFA KDS+NEWN+S LR+W +T YDK+VFIDAD ++ +D LF +PQLSA+ NDK LFN G+MV EPS C+F++LM K +++SYNG QG+LNE+F+WWHRL +VN +K F GE+ + + + + +H+LGLKPW+CYRDYDCNWD + FASD HEKWW+VYD+M + L+ YCGL + M R++KWR IA + PD+HW+I V DPR+ NL Sbjct: 55 PQVNRNPRWLRLVRNYLPEKR-IRVGYLNLDEQERESYEASGPLILKNVHVSLDPIPANVTWKSLFPEWIDEEVSYCPEIPLPTPEGSDADVDVIVARVPCDGWSENKGLRDVFRLQVNLAVANLAVRSG--LRRVDSTVYIVFIGLCGPMHEIFKCDERVRRVGDYWVYKPNLPRLKQKLLMPAGSCHVASPFAQVGQEVWRQKNEDN----LTSEAISKQRVAYVTVLHSSEAYVCGAIALAQSIRQSGSNKDMVLLHDQSITNRSLLGLSSAGWNLRLIDRIRSPFAKKDSYNEWNYSKLRVWQVTDYDKLVFIDADFIILKKMDHLFYYPQLSASGNDKVLFNSGIMVFEPSPCLFKELMEKSFKINSYNGGDQGFLNEIFVWWHRLSKRVNTMKYF-GEKLKGTHDLPENLEGVHYLGLKPWVCYRDYDCNWDISVRRVFASDSVHEKWWKVYDKMSDQLKGYCGLNKEMEKRIEKWRRIAENNSLPDKHWEIKVKDPRKKNL 554
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: M1BMZ9_SOLTU (Hexosyltransferase OS=Solanum tuberosum GN=PGSC0003DMG400018997 PE=3 SV=1) HSP 1 Score: 528.865 bits (1361), Expect = 1.389e-178 Identity = 273/500 (54.60%), Postives = 345/500 (69.00%), Query Frame = -2 Query: 182 LDLLQEEINSKKEIKIGLVNINSNEEIQY-QLPGSV-VSTVHVRFDRVSKKRKWEDFFPFRIDENQ----QNCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQ 1663 LLQ+EI K +KIGLVN++ Y L G+ + T V+F +VS K KW+D FP IDE + CPEIPMP E Y++LDVVVAK+PCK G G RDV LQVNLVVAN+LV GW R VYAVF+G CGPM EIFRCED+L E+ VYKPEL++LKQ +LMP GSCQLA+P+ E +E+W+ + A + K + +EAY TV+H+SE YVCGA+ALAQSII TNSTRDL+LL D++I+P+SL GL+AAGW + I IRSP A K+++NEWN+S LRIW L YDKV+FID+D +VF NID F +P+LSAA ND +FN GVM+IEPS C F++LM K E+ SYNG QG+LNE+F+WWHR P ++N LK F R + D+ +H+LGLKPW+CY DYDCNWDK Q FASD AHE+WW+VY +M L+ YC LT M+ R+ KWR A+ D HW+I V DPR+ Sbjct: 13 FQLLQDEIKDKSTLKIGLVNLDDVSFFDYVGLHGAKNMETFDVKFPKVSNKIKWKDLFPEWIDEKELSAKPTCPEIPMPVFEVYEELDVVVAKVPCKH-VGVDGSRDVLRLQVNLVVANLLVSGGW---NKNRPVYAVFIGDCGPMWEIFRCEDMLLHEENLWVYKPELKKLKQKILMPVGSCQLARPFSEQEQESWKSYPAS----TLDKTFHKKPREAYVTVIHSSEAYVCGAIALAQSIILTNSTRDLVLLADDSISPKSLYGLRAAGWKIKKIKRIRSPHAPKNAYNEWNYSKLRIWQLIEYDKVIFIDSDFVVFRNIDQFFSYPELSAAGNDGYIFNSGVMIIEPSKCKFQNLMNKRFEVSSYNGGDQGFLNEMFVWWHRWPTKLNTLKIFINSNHR---DLPDDSYTVHYLGLKPWLCYEDYDCNWDKVESQIFASDSAHERWWKVYKKMSMELREYCALTPQMDARIIKWRRKAKKANFSDGHWRIQVKDPRR 501
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: A6YTD3_CUCME (Hexosyltransferase OS=Cucumis melo subsp. melo PE=3 SV=1) HSP 1 Score: 532.717 bits (1371), Expect = 1.484e-178 Identity = 267/508 (52.56%), Postives = 347/508 (68.31%), Query Frame = -2 Query: 173 KKEIKIGLVNINSNEEIQ----YQLPG------SVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQ-----NCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLL----RKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQ-KEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQ-PDEHWKIGVTDPRQYNL 1633 ++ IKIGL+NI+++++ + L G S + TV V FDR+ K+ +WE FP IDE+++ CP IPMP E Y DL++VV ++PCK G RDVF LQ NL A + V SGWV E+ R VY VF+G CG M+EIFRC+DL+ R VE+ VYKPE++RLKQ +L+P GSCQLA Y TG+E WR+ + + + K+AY T+LH+SE YVCGA+ALAQS+++TN+++DLILL D +I+P S+ LK AGW I+ IRSPF++K S+NEWN+S LRIW LT YDK+VFIDAD+LV NID F PQLSAA N+K FN GVM++EPS C+FE+LM K E+ SYNG QG+LNEVF WWHRLP +VN+LK F E + +H+LGLKPWMCY+DYDCNWD E Q FASD AH KWWQ+Y+ MP LQ +CGLT+ M+ R++KWR IAR+ D HWKI +TDPR++ L Sbjct: 105 QETIKIGLINISTDDKDEIHDTLHLLGLIENRRSRIETVTVDFDRIEKEFEWERLFPEWIDEDEKYKSSPKCPNIPMPKTEDYSDLNIVVLRIPCK--RGILTSRDVFRLQANLAAARVAVASGWVEEEIYRTVYVVFLGECGAMREIFRCDDLVIKDDRTVENVWVYKPEIKRLKQKILLPFGSCQLAPVYARTGREVWRHFMLQKPPKTNSTTTHYHKPKQAYVTILHSSEAYVCGAIALAQSLLQTNTSKDLILLADNSISPNSIQALKDAGWYVMRIDRIRSPFSEKGSYNEWNYSKLRIWQLTMYDKIVFIDADLLVLKNIDQFFALPQLSAAANNKMRFNSGVMIVEPSACLFEELMEKSFELKSYNGGDQGFLNEVFTWWHRLPSRVNYLKIFLKENSENDSGT--DPYAIHYLGLKPWMCYKDYDCNWDMEDHQIFASDSAHAKWWQIYESMPTELQHFCGLTKKMDSRIRKWRRIARNNSTFADAHWKIKITDPRRHRL 608
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: A0A0A0LGC4_CUCSA (Hexosyltransferase OS=Cucumis sativus GN=Csa_2G021740 PE=3 SV=1) HSP 1 Score: 529.25 bits (1362), Expect = 3.237e-177 Identity = 263/505 (52.08%), Postives = 345/505 (68.32%), Query Frame = -2 Query: 182 KKEIKIGLVNINSNEEIQ----YQLPGSV------VSTVHVRFDRVSKKRKWEDFFPFRIDENQQ-----NCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLL----RKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQ-KEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQ-PDEHWKIGVTDPRQ 1633 ++ IKIGL+NI ++++ + L G + + TV + FDR+ K+ +WE FP IDE+++ CP IPMP E Y DL+VVV ++PCK G RDVF LQ NL A + V SGWV ++ R VY VF+G CG M+EIFRC+DL+ R VE+ VYKPE++RLKQ +L+P GSCQLA Y TG+E WR+ + + + K+AY T+LH+SE YVCGA+ALAQS+++TN+++DL+LL D +I+P S+ LK AGWD I+ IRSPF++K S+NEWN+S LRIW LT Y+K+VFIDAD+LV NID F PQLSAA N+K FN GVM++EPS C+FE+LM K E+ SYNG QG+LNE+F WWHRLP +VN+LK F E + +H+LGLKPWMCY+DYDCNWD E Q FASD AH KWWQVY+ MP LQ +CGLT+ M+ R++KWR IAR+ D HWKI +TDPR+ Sbjct: 95 QETIKIGLINIRTDDKDEIHDTLHLLGLIESRRTRIETVTIDFDRIEKEFEWERLFPEWIDEDEKYRSSPKCPNIPMPKTEDYSDLNVVVLRIPCK--RGILMSRDVFRLQANLAAARVAVASGWVEEDIYRTVYVVFLGECGAMREIFRCDDLVIKDDRTVENVWVYKPEIKRLKQKILLPFGSCQLAPVYARTGREVWRHFMLRKPPKTNSTTTHYHRPKQAYVTILHSSEAYVCGAIALAQSLLQTNTSKDLLLLADNSISPNSIQALKDAGWDAMRIDRIRSPFSEKGSYNEWNYSKLRIWQLTMYEKIVFIDADLLVLKNIDQFFALPQLSAAANNKMRFNSGVMIVEPSACLFEELMEKSFELKSYNGGDQGFLNEIFTWWHRLPSRVNYLKIFLKENSENDSGT--DPYAIHYLGLKPWMCYKDYDCNWDMEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWKINITDPRR 595 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092162 ID=g.barbadense_cottongen_reftransV1_0092162; Name=g.barbadense_cottongen_reftransV1_0092162; organism=Gossypium barbadense; type=contig; length=1901bpback to top |