g.barbadense_cottongen_reftransV1_0092022, g.barbadense_cottongen_reftransV1_0092022 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092022
Unique Nameg.barbadense_cottongen_reftransV1_0092022
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2863
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At11chromosomeg.barbadense_cottongen_reftransV1_0092022:1..2863 .
At11:88801099..88804621 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 9.325e-49
Identity = 99/292 (33.90%), Postives = 160/292 (54.79%), Query Frame = 3
Query: 1998 NTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQ-QGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDG--IFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLY-LTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861
            + VC+  KSLYGLKQA RQW +K    + S  + ++  D  ++ K+    N ++LL+YVDD++I G D+ LI +LKG L+++F MKDLG  +  LG++I+R +    ++L+Q KY   ++    +  AK  +TPL  + KL+       +  EEK +     K  Y   +G L+Y +  TRPDI +AV  +S+F+++P   H      ++RY++ + G  +    S    L  + D+D A    +RKS TG+         SW+ K Q  VA S+ E +Y +   T  E++W
Sbjct:  951 HMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV--EEKGN---MAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIW 1236          

HSP 2 Score: 77.0258 bits (188), Expect = 9.325e-49
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 2
Query: 1589 EPKSYSEAVQNPA*---IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936
            EP+S  E + +P     +KAM+EE+ +L+ N T+ +V LP  K  + CK+  K+K     ++ R+KARLV KG+ QK+G+ + + FSPV K+ ++R +L+LA      + Q+DV  AFL
Sbjct:  810 EPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFL 928          

HSP 3 Score: 26.1794 bits (56), Expect = 9.325e-49
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1
Query: 1942 DLCEEVYMELPTGF 1983
            DL EE+YME P GF
Sbjct:  931 DLEEEIYMEQPEGF 944          

HSP 4 Score: 105.145 bits (261), Expect = 1.355e-41
Identity = 57/140 (40.71%), Postives = 79/140 (56.43%), Query Frame = 2
Query:  788 GIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYNIQPNLSHLKVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHES 1204
            GI H+     TPQ NGV ER +R ++E  +++   +K+   FWGE V+TACYLIN  PS  L  + P  +  N + + SHLKVFGC  +A      + K   K IP +F+GY   + GY L++   K    +RDV F ES
Sbjct:  568 GIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRES 707          

HSP 5 Score: 88.9669 bits (219), Expect = 1.355e-41
Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 3
Query:  357 SLWYARLGHVPSSKLHHVPFLQSFSF-DDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKF 752
             LW+ R+GH+    L  +      S+     +  C  C   +Q R  F  S  R     DLV+ D+ GP  I +  G++YF+T +DD SR  WVY+LK K +     ++F  LV+ +    +K  RSDNG ++
Sbjct:  423 DLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEY 555          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.245e-44
Identity = 87/227 (38.33%), Postives = 136/227 (59.91%), Query Frame = 3
Query: 2187 TGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPL--EQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861
            TG+   L+  L   L+  F MKDLG + YFLG++I     G+FL+Q KYA +++ ++G+   K  +TPL  + N+ ++  +Y               D + ++ ++G L YLT TRPDI+YAV+ + Q M  P ++  +   RV+RY+K +   G+ +  +S   +  FCDSD A C  +R+S TGFC  LG ++ SW  K+Q TV+RSS ET+YR++A TA+E+ W
Sbjct:   13 TGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY--------------PDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.706e-42
Identity = 89/296 (30.07%), Postives = 148/296 (50.00%), Query Frame = 3
Query: 1995 GNTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGG---NXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTH-TRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQ--LITFCDSDCASCPMSRKSVTGFCIKLGN-SLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861
             + VC+  K++YGLKQA+R W     QAL    F  S  D  ++   +G    N+ +LL   D ++ TG D   +   K  L + F+M DL E+K+F+G+ I   +D I+L+Q  Y  ++++   +    + +TPL        +  D+               T  + LIG L+Y+   TRPD+T AV+ LS++             RV+RY+K +    ++   + + +  +I + DSD A   + RKS TG+  K+ + +L  W  K+QN+VA SS E +Y ++     E +W
Sbjct: 1028 SDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATG-DMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN------------TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALW 1310          

HSP 2 Score: 68.5514 bits (166), Expect = 1.706e-42
Identity = 37/101 (36.63%), Postives = 62/101 (61.39%), Query Frame = 2
Query: 1634 KAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936
            +A+  E++  + NNTWT+   P  K+ +  ++   +KY       R+KARLVA+G++QK  + Y +TF+PVA++ + R +L+L   +   + QMDV  AFL
Sbjct:  908 EAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFL 1008          

HSP 3 Score: 21.9422 bits (45), Expect = 1.706e-42
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1
Query: 1945 LCEEVYMELPTG 1980
            L EE+YM LP G
Sbjct: 1012 LKEEIYMRLPQG 1023          

HSP 4 Score: 97.4413 bits (241), Expect = 2.193e-34
Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = 2
Query:  788 GIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVL--HNKFPFEILYNIQPNLSHLKVFGCLCYATQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDF 1282
            GI +     HTPQ NGV+ER  R + E A+ +   +K+   FWGE V TA YLIN +PS  L   +K P+E+ +N +P L HL+VFG   Y      + KF  K   S+F+GY     G+ L++   + F V RDV   E+      A    +VF     +  + +F
Sbjct:  568 GISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNF 732          

HSP 5 Score: 72.4034 bits (176), Expect = 2.193e-34
Identity = 46/157 (29.30%), Postives = 71/157 (45.22%), Query Frame = 3
Query:  315 HSIDCMHSVLDNNTSLWYARLGHVPSSKLHHVPFLQSFS---FDDNLIHSCAVCPL---ARQTRQPFSN--SVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761
            +SI+  H    NN  LW+ R GH+   KL  +     FS     +NL  SC +C      +Q R PF      T   +P  +VH D+ GP    T     YF+  VD  +     YL+K+KS+     + F+   +  F+  + Y   DNG ++ ++
Sbjct:  405 YSINAKHK---NNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSN 558          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 5.184e-23
Identity = 86/296 (29.05%), Postives = 142/296 (47.97%), Query Frame = 3
Query: 1980 FLQSRG-NTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDG-IFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHT-RPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKK-QNTVARSSAETKYRSMAATASEI 2855
            F+  R  + V      +YGLKQA   WN  +   L    F + + ++ L+ +      + + +YVDDL++      +   +K  L + + MKDLG++  FLGL I +  +G I L+ + Y  +  ++S I   K   TPL  +  L            E     L+D T YQ ++G+LL+  +T RPDI+Y V  LS+F++ P+  HL +A RV+RY+  +    +   S S   L  +CD+   +      S  G+   L  +  +W  KK +  +   S E +Y + + T  EI
Sbjct:   24 FVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLF-----------ETTSPHLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASETVMEI 308          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: M240_ARATH (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana GN=AtMg00240 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.885e-16
Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 3
Query: 2508 LYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFC 2744
            +YLT TRPD+T+AV+ LSQF    + + +    +V+ Y+K + GQG+  S++S  QL  F DSD ASCP +R+SVTGFC
Sbjct:    1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFC 79          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.323e-15
Identity = 43/105 (40.95%), Postives = 70/105 (66.67%), Query Frame = 2
Query: 1571 STSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALA 1885
            +T+   EPKS   A+++P   +AM+EE+  L  N TW +VP P+ ++ + CK+  K K  +   ++R KARLVAKG+ Q+EG+ +V+T+SPV +  T+R +L +A
Sbjct:   21 TTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5B460_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012765 PE=4 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 3.386e-132
Identity = 127/279 (45.52%), Postives = 191/279 (68.46%), Query Frame = 3
Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMA 2837
            VC+ +KSLYGLKQ+ R W  + T+++ +  ++QS  D++LF K+Q G +  L++YVDD+V+TGND    K L+  L++ F+MKDLG LKYFLG+E+ R  +GIFL+QRKYAL+L+ ++G+ G +   TP+E+  KL  +E +Q          +  DK  YQRL+GRL+YL HTRPD+ YA+  +SQ+M +P   H+N  +R++RY+KN+PG+GIL + + + Q I  + D+D       R+S +G+   +G +L +WK KKQN VARSSAE ++R MA
Sbjct:  829 VCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKQHGKITALIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLGPLKYFLGIEVSRSSEGIFLSQRKYALDLLQETGMSGCQPVNTPIEEGLKL-CVEPNQ----------VSTDKGRYQRLVGRLMYLAHTRPDLAYALSVVSQYMHNPGEQHMNAVMRILRYLKNAPGKGILFAKNVNHQSIEVYTDADWXGAVDDRRSTSGYFTFVGGNLVTWKSKKQNVVARSSAEAEFRGMA 1096          

HSP 2 Score: 187.963 bits (476), Expect = 3.386e-132
Identity = 135/394 (34.26%), Postives = 206/394 (52.28%), Query Frame = 2
Query:  791 IIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN--IQPNLSHL--KVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSSFPHDPLCCFSRIF--KPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTH-----NQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936
            IIHQ+ C +TPQQNGV ERK+RHLLEV +A    +K  + +WGE + +A YLIN +PSS ++ + P + L N  + P + +L  +VFGC+ +       + K +   +  VF+GY+  +KGY  ++  T+  ++  DV FHE    F  +  +    +  ++Q LD D+ HIS  + S               S     +    T +P  SS     L      F  + P+  +  I    +     +   +   +++  H     N+ F++  S++  P S  EA+ +      M EE+ +L+ N TW +V  P  K  + C++   +KYKA   +ERFKARLVAKGY+Q  G+ Y  TF+PVAK+ TVRV+L+LA    WPL Q DV N FL
Sbjct:  412 IIHQTTCSNTPQQNGVAERKNRHLLEVVRASLIAAKTPISYWGEAITSAAYLINRVPSSSINFQTPLQALTNVVVAPTVPNLPPRVFGCVAFVHLHKHQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHEDSMYFS-SESELQGEYHKEIQTLDYDY-HISKENESGQSELVNQEAGELDMSGQQFGSEDVFTEIPNQSSSVEGVLNLEPDXFMKRLPHRHNRGIPKPTYEPELSTKVKYPMSNYVSNHRLSESNKSFVNQLSTVAIPNSVQEALADXRWKAXMNEEMKSLQKNETWELVECPPGKKPVGCRWIYTVKYKADGXIERFKARLVAKGYTQTYGIDYTXTFAPVAKINTVRVLLSLAANLDWPLQQFDVKNXFL 803          

HSP 3 Score: 95.5153 bits (236), Expect = 3.386e-132
Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 3
Query:  360 LWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761
            LW+ RL H     L  + F   F+  D     C +C LA+     F   + +S  PF ++H D+WGP ++ T SG R+F+T +DD +RMTW+ L+K K E  L  + F  +++ Q++A ++  RSDNG ++ +S
Sbjct:  269 LWHRRLXHASFGYLKKL-FPSXFAKSDISGFRCDICELAKSHXVSFPLILNKSPFPFMVIHSDVWGPSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFQXFHKMIETQYNAKVRVLRSDNGGEYQSS 401          

HSP 4 Score: 22.7126 bits (47), Expect = 3.386e-132
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query: 1942 DLCEEVYMELPTG 1980
            +L EEVYM+LP G
Sbjct:  806 ELSEEVYMDLPPG 818          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5ACT8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007488 PE=4 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 6.845e-126
Identity = 127/287 (44.25%), Postives = 190/287 (66.20%), Query Frame = 3
Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861
            VC+ +KSLYGLKQ+ R W  + T+++ +  ++QS  D++LF K+Q G +  L++YVDD+V+TGND    K L+  L++ F+MKDLG LKYFLG+E+ R  +GIFL+QRKYAL+L+ + G+ G +   TP+E+  KL  +E +Q          +  +K  YQRL+GRL+YL HTRPD+ YA+  +S +M +P   H+N  +R++RY+KN+PG+GIL + +   Q I  + D D A     R+S +G+   +G +L +WK K QN VARSSAE ++R MA    E +W
Sbjct:  756 VCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKQHGKITXLIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLGPLKYFLGIEVSRSSEGIFLSQRKYALDLLXEXGMSGCQPVNTPIEEGMKL-CVEXNQ----------VSTBKGRYQRLVGRLMYLAHTRPDLAYALSVVSXYMHNPGEQHMNAXMRILRYLKNAPGKGILFAKNVDHQSIEXYTDXDWAGAVDDRRSTSGYFTFVGGNLVTWKSKXQNXVARSSAEAEFRGMALGLCEALW 1031          

HSP 2 Score: 173.711 bits (439), Expect = 6.845e-126
Identity = 134/392 (34.18%), Postives = 203/392 (51.79%), Query Frame = 2
Query:  791 IIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN--IQPNLSHL--KVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSSFPHDPLCCF-----SRIFKPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936
            IIH + C +TPQQNGV ERK+RHLLEV +A    +K  + +WGE + +A YLIN +PSS ++ + P + L N  + P + +L  +VFGC+ +       + K +   +  VF+GY+  +KGY  ++  T+  ++  DV FHE    F  +  +    +  ++Q LD D+ HI           S  S   +         P+ S+SV G  +   DP         +R    P +  +  T   +  S +  ++ +  S+    NQL     S++  P S  EA+ +P  +K             TW +V  P  K  + C++   +KYKA   +ERFKARLVAKGY+Q  G+ Y +TF+PVAK+ T+RV+L+LA    WPL Q DV NAFL
Sbjct:  365 IIHXTTCSNTPQQNGVAERKNRHLLEVVRASLIAAKTXISYWGEAITSAAYLINRVPSSSINFQTPLQALTNXVVAPTVPNLXPRVFGCVAFVHLHKHQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHEDSMYFS-SESELQGEYHKEIQTLDYDY-HI------SEEDESGQSELVNQEVDVFTEIPNQSSSVEGVLNLEPDPFMKRLPHRHNRGIPKPTYEPELSTKVKYPMSNYVSTHRLSESNKSFVNQL-----STVAIPNSVQEALADPRRMK-------------TWELVECPPGKKPVGCRWIYTVKYKADGSIERFKARLVAKGYTQTYGIDYTETFAPVAKINTIRVLLSLAANLDWPLQQFDVKNAFL 730          

HSP 3 Score: 89.7373 bits (221), Expect = 6.845e-126
Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 3
Query:  456 CAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761
            C +C L +  R  F   + +S  PF ++H D+WGP ++ T SG R+F+T +DD +RMTW+ L+K K E  L  + F   ++ Q++A  +  RSDNG ++ +S
Sbjct:  253 CDICELXKSHRASFPLILNKSPFPFMVIHSDVWGPSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFQXFHKXIETQYNAKXRVLRSDNGGEYXSS 354          

HSP 4 Score: 22.7126 bits (47), Expect = 6.845e-126
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query: 1942 DLCEEVYMELPTG 1980
            +L EEVYM+LP G
Sbjct:  733 ELSEEVYMDLPPG 745          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5AEE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029183 PE=4 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.166e-123
Identity = 122/279 (43.73%), Postives = 186/279 (66.67%), Query Frame = 3
Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMA 2837
            VC+ +KSLYGLKQ+ R W  + T+++ +  ++QS  D++LF K+  G +  L++YVDD+V+TGND    K L+  L++ F+MKDLG LKYFLG+E+ R  +GIFL+QRKYAL+L+ ++G+ G +   T +E+  KL  +E +Q          +  DK  YQRL+GRL+YL +TRPD+ Y +  +SQ+M +    H+N  +R++RY+KN+PG+GIL + +   Q I  + D+D       R+S +G+   +G +L +WK KKQN VARSSAE ++R MA
Sbjct:  668 VCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKXXGKITTLIVYVDDMVVTGNDPXERKXLQNYLSREFEMKDLGPLKYFLGIEVSRSSEGIFLSQRKYALDLLQETGMSGCQPINTSIEEGLKL-CVEPNQ----------VSTDKGRYQRLVGRLMYLAYTRPDLAYXLSVVSQYMHNXXEQHMNAVMRILRYLKNAPGKGILFAKNIDHQSIEVYTDADWXGAVDDRRSTSGYFTFVGGNLVTWKSKKQNVVARSSAEAEFRGMA 935          

HSP 2 Score: 187.963 bits (476), Expect = 1.166e-123
Identity = 139/400 (34.75%), Postives = 206/400 (51.50%), Query Frame = 2
Query:  788 GIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN--IQPNLSHL--KVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSS-------FPHDPLC-----CFSRIFKPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936
            GIIHQ+ C +TPQQNGV ERK+RHLLEV +A    +K  + +WGE + +A YLIN +PSS ++ + P + L N  + P + +L  +VFGC+ +       + K +   +  VF+GY+  +KGY  ++  T+  ++  DV FHE    F  +  +    +  ++  LD D+ HIS    S               S     +    T +P  SS          DP         +R    P +  +  T   +  S +  +  +  S+    NQL     S++  P S  EA+ +P    AM EE+ +L+ N TW +V  P  K  + C++   +KYKA   +ERFKARLVAKGY+Q  G+ Y +TF+ VAK+ TVRV+L+LA    WPL Q DV N FL
Sbjct:  250 GIIHQTTCSNTPQQNGVAERKNRHLLEVVRASVIAAKTPITYWGEAITSAAYLINRVPSSSINFQTPLQALTNAVVAPTVPNLPPRVFGCMAFVHLHKHQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHEDSMYFS-SESELXGEYHKEIXTLDYDY-HISEEDESGQSELVNQEVGELDMSGQQFGSEDVFTEIPNQSSSVEGVLNLEPDPFMKRLPHXHNRGIXKPTYEPELSTKVKYPXSNYVSNXRLSESNKSFVNQL-----STVXIPNSVXEALXDPRWKAAMNEEMKSLQKNETWELVECPPGKKPVGCRWIYTVKYKADGSIERFKARLVAKGYTQTYGIDYTETFAFVAKINTVRVLLSLAANLDWPLQQFDVKNVFL 642          

HSP 3 Score: 79.337 bits (194), Expect = 1.166e-123
Identity = 35/102 (34.31%), Postives = 60/102 (58.82%), Query Frame = 3
Query:  456 CAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761
            C +C LA+  R  F   + +S+ PF ++H D+W P ++ T SG R+F+T +DD +RMTW+ L+K                K++++A ++  RSDNG ++ +S
Sbjct:  154 CXICELAKSHRASFPLILNKSSFPFMVIHSDVWXPSKVPTLSGSRWFVTFIDDCTRMTWLCLMK---------------TKDEYNAKVRVLRSDNGREYQSS 240          

HSP 4 Score: 24.6386 bits (52), Expect = 1.166e-123
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query: 1942 DLCEEVYMELPTG 1980
            +L EEVYM+LP G
Sbjct:  645 ELSEEVYMDLPPG 657          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5B887_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018650 PE=4 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.789e-116
Identity = 121/279 (43.37%), Postives = 182/279 (65.23%), Query Frame = 3
Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMA 2837
            VC+ +KSLYGLKQ+ R W  + T+++ +  ++QS  D++L  K+Q G +  L++YVDD+V+TGND    K L+  L++ F+MKDLG LKYFLG+E+ R  +G FL+QRKYAL+L+ ++G+ G +   T +E+  KL  +E +Q          +  DK  YQRL+GRL+YL HTRPD+ YA+  +SQ+M +P+  H+N  +R++RY+KN+ G+GIL + +     I  + D D A     R+S +G+    G +L  WK KK N VA SSAE ++R MA
Sbjct:  747 VCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLLLKKQHGKITTLIVYVDDMVVTGNDPKERKTLQNYLSREFEMKDLGLLKYFLGIEVSRSSEGNFLSQRKYALDLLQETGMSGCQLVNTSIEEGLKL-CVEPNQ----------VSTDKGRYQRLVGRLMYLAHTRPDLAYALSVVSQYMHNPREQHINAVMRILRYLKNAXGKGILFAKNVDHXSIEVYTDXDWAXAVDDRRSTSGYFTFXGGNLVXWKSKKXNVVAXSSAEXEFRGMA 1014          

HSP 2 Score: 162.54 bits (410), Expect = 1.789e-116
Identity = 123/394 (31.22%), Postives = 197/394 (50.00%), Query Frame = 2
Query:  791 IIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN--IQPNLSHL--KVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSSFPHDPLCCFSRIF--KPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTH-----NQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936
            IIHQ+ C +TPQQNGV ERK+RHLLEV +A    +K  + +WGE + +  YLIN +PSS ++ + P + L N  + P + +L  +VFGC+ +       + K +   +  VF+GY+  +KGY  ++  T+  ++  DV FHE+   F     +    +  ++Q LD D+ HIS    S               S     +      +P  SS     L      F  + P+  +  I    +     +   +   +++ TH     N+ F++  S++  P S  +A+ +P    AM EE+ +L+ N TW +V  P  K  + C++              +  +LVAKGY+Q  G+ Y +TF+PVAK+ T++V+L+L     WPL Q DV NAFL
Sbjct:  343 IIHQTTCSNTPQQNGVVERKNRHLLEVVRASLIAAKTPISYWGEAITSVAYLINRVPSSSINFQTPLQALTNAVVAPTVPNLPPRVFGCVAFVHLHKHQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHENSMYFSXES-ELQGEYHKEIQTLDYDY-HISEKDESGQSELVNQEVGELDMSGQQFWSEDVFIEIPNQSSSVEGVLNLEPDPFMKRLPHRHNRGIPKPTYEPELSTKVKYPMSNYVSTHRFSESNKSFVNQLSTVTIPNSVQKALADPRWKAAMNEEMKSLQKNETWELVECPPGKKPVGCRWI-------------YTVKLVAKGYTQTYGIDYTETFAPVAKINTIQVLLSLTANLDWPLQQFDVKNAFL 721          

HSP 3 Score: 98.5969 bits (244), Expect = 1.789e-116
Identity = 49/134 (36.57%), Postives = 79/134 (58.96%), Query Frame = 3
Query:  360 LWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761
            LW+ RLGH     L  + F   F+  D     C +C LA+  R  F   + +S  PF ++H D+W P ++ T SG R+F+T +DD +RMTW+ L+K K E  L  ++F  +++ Q++A ++  RSDNG ++ +S
Sbjct:  200 LWHRRLGHASFGYLKKL-FPSLFAKSDISGFRCDICELAKSHRALFPLILNKSPFPFMVIHSDVWAPSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFQKFHKMIETQYNAKVRVLRSDNGGEYQSS 332          

HSP 4 Score: 22.7126 bits (47), Expect = 1.789e-116
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query: 1942 DLCEEVYMELPTG 1980
            +L EEVYM+LP G
Sbjct:  724 ELSEEVYMDLPPG 736          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5BQL8_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_007668 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.128e-112
Identity = 137/400 (34.25%), Postives = 208/400 (52.00%), Query Frame = 2
Query:  791 IIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN-----IQPNLSHLKVFGCLCYATQTPYK-DKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSS-------FPHDPLC-----CFSRIFKPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936
            IIHQ+ C +TPQQNGV ERK+RHLLEV +A    +K  + +WG+ + +A YLIN +PSS ++ + P + L N       PNL+  +VFGC+ +     ++  K +   +  VF+ Y+  +KGY  ++   +  ++  DV FHE +  F  +  +    +  ++Q LD D+ HIS                    S          T +P  SS          DP       C +R    P +  +  T   +  + +  ++ +F S     N+ F++  S++  P S  EA+ +P    AM EE+ +L+ N TW  V   L K S+ C++   +KYKA   +ERFKARLVAKGY+Q  G+ Y  TF+P+AK+ T+RV+L+LA    WPL Q DV NAFL
Sbjct:  205 IIHQTTCSNTPQQNGVAERKNRHLLEVVRASLIAAKTSISYWGKAITSATYLINRVPSSSINFQTPLQALTNAVVVPTVPNLT--RVFGCVAFVHLHKHQHTKLTSHALQCVFVRYALHKKGYRCYHPPIRRMYITMDVVFHEDLMYFS-SESELQGEYHKEIQTLDYDY-HISEEDEFGQSELVNQEVGELDMSGQKFGFEDVFTEIPNQSSSVEGVLNLEPDPFMKRLPHCHNRGIPKPTYEPELSTKVKYPMNNYVCNHRLFES-----NKSFVNQLSTVAIPNSVQEALDDPKWKAAMNEEMKSLQKNETWEFVECLLGKKSVGCRWIYTVKYKADGSIERFKARLVAKGYTQTYGIDYTKTFAPIAKINTIRVLLSLAANLDWPLQQFDVKNAFL 595          

HSP 2 Score: 185.652 bits (470), Expect = 1.128e-112
Identity = 108/259 (41.70%), Postives = 167/259 (64.48%), Query Frame = 3
Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWK 2777
            VC+ +KSLYGLKQ+ R W  + T+++ +  ++QS  D++LF K+Q G +  L++YVDD+V+TGND    K L+  L++ F++KDLG LKYFLG+E+ R  + IFL+QRKYAL+++ ++G+ G +   T +E+  KL  +E +Q          +  DK  YQRL+GRL+YL HTRPD+ YA+  +SQ+M +P   H+N  + ++RY+KN+ G GIL + S   Q I  + D D       R+S +G+   +G  L SW+
Sbjct:  621 VCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKQHGKITTLIVYVDDMVVTGNDPEERKALQNYLSREFEIKDLGHLKYFLGIEVSRSSEEIFLSQRKYALDILQETGMSGCQPINTLIEEGLKL-CVEPNQ----------VSTDKGRYQRLVGRLMYLAHTRPDLAYALSVVSQYMHNPGEQHMNAVMCILRYLKNARGNGILFAKSVDHQSIEVYTDVDWIGVVDDRRSTSGYFTFVGGYL-SWQ 867          

HSP 3 Score: 78.5666 bits (192), Expect = 1.128e-112
Identity = 44/136 (32.35%), Postives = 71/136 (52.21%), Query Frame = 3
Query:  360 LWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNSTV 767
            LW+ RLGH     L  + F   F+  D     C +C LA+  R  F   + +S  PF ++H D+WGP ++ T SG R+F+T +DD+             E  L  + F  +++ Q++A ++  RSDNG ++ NS +
Sbjct:   75 LWHRRLGHASFGYLKKL-FPSLFAKSDISGFRCDICELAKSHRASFLLILNKSLFPFMVIHSDVWGPSKVPTLSGSRWFVTFIDDY-------------EVNLLFQNFHKMIETQYNAKVRVLRSDNGGEYQNSNL 196          

HSP 4 Score: 23.483 bits (49), Expect = 1.128e-112
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query: 1942 DLCEEVYMELPTG 1980
            +L EEVYM+LP G
Sbjct:  598 ELSEEVYMDLPLG 610          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5C6P3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018454 PE=4 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 3.188e-111
Identity = 151/288 (52.43%), Postives = 202/288 (70.14%), Query Frame = 3
Query: 1998 NTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861
            N VC   KSLYGLKQASRQW  K + A++   F QS  D+SLF K   G  + LL+YVDD++I  N++  I +LK  LN+ FK+KDLG++KYFLGLEI +   GI ++QRKY L+L++D G  G K+A+TP+E N KL+    D+G+         L D ++Y+RL+G+LLYLT TRPDI+Y V  LSQF+  PK+ HL+ A R++RY+K +PG G+   S+S   L+ + DSD A CP SR+SVTGFC+ LGNSL SWK KKQ+ V+RSSAE +YR+MA T+ EI W
Sbjct:  890 NAVCLLHKSLYGLKQASRQWFSKFSTAIMGLGFSQSPSDHSLFIKNVDGLFIALLVYVDDVIIASNNQGAIADLKSELNKLFKLKDLGDVKYFLGLEIAKSSTGICVSQRKYVLDLLSDFGYLGCKAASTPMEANVKLSM---DEGVD--------LPDVSLYRRLLGKLLYLTLTRPDISYVVGRLSQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSELXLMAYTDSDWARCPDSRRSVTGFCVFLGNSLVSWKSKKQHIVSRSSAEAEYRAMANTSCEITW 1166          

HSP 2 Score: 167.933 bits (424), Expect = 3.188e-111
Identity = 121/323 (37.46%), Postives = 177/323 (54.80%), Query Frame = 2
Query: 1004 NIQPNLSHLKVFGCLCY-ATQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSSFP---HDPLCCFSRIFKPPNWLHDX--XXXXXXXXXXXXXXNH-----IFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFLQ 1939
            ++ P+ SHL+VFGCLCY +T    + KFSP+   +VF+GY    KGY L ++ET+S  ++R+V FHE +FPF       S   P     + SD  H                         +  N  +S+ +P   S P     P    +R+ K P++L D+        +  +   ++H     + Y  L    +LF  S S + EP S+++A + P    AM+ E+  LE N TW++V L + K  + CK+  KIK+KA   +ER+KARLVAKGY+Q+EG+ YVDTFSPVAKLVTV+++LA+A +  W L Q+DV NAFL 
Sbjct:  568 SVLPDYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIETRSISISRNVIFHEEIFPF-------SKTNPCSSPDISSDLFH------------------DRVLPCIAADNDQSSSVLPRVVSQPPLQVAPSSRXTRVSKQPSYLKDYHCSLINSVAHVETHSTSHPIQHFLSYDKLSPSYKLFSLSVSIISEPSSFAKAAEIPEWRAAMDCELEALEENKTWSIVSLXVGKHPVGCKWVYKIKHKADGTIERYKARLVAKGYTQREGIDYVDTFSPVAKLVTVKLLLAIAAVKGWHLSQLDVNNAFLH 865          

HSP 3 Score: 26.5646 bits (57), Expect = 3.188e-111
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 1
Query: 1942 DLCEEVYMELPTGF 1983
            DL EEVYM+LP G+
Sbjct:  867 DLNEEVYMKLPPGY 880          

HSP 4 Score: 129.028 bits (323), Expect = 4.845e-27
Identity = 69/160 (43.12%), Postives = 98/160 (61.25%), Query Frame = 3
Query:  348 NNTSLWYARLGHVPSSKLHHVPFLQSF--SFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNSTVLPCLLIWGLYIKAYVFTP 821
            N  SLW++RLGH   S+L  +  +  F  SFD   +  C VCPLA+Q   P+ +   R +  FDL+HLDIWGP+ + +  G+++FLTIVDD+SR+TWVY+LK+KSE   Y+  F   VK QF   +K  RSDN  + F S     L +  ++ ++ V TP
Sbjct:  410 NILSLWHSRLGHPSFSRLKGLQSVLDFDSSFD---LTPCXVCPLAKQRCLPYISLNKRCSSTFDLLHLDIWGPFSVGSVEGYKFFLTIVDDYSRVTWVYMLKNKSEVQKYIPDFFAFVKKQFGKEVKAIRSDNAPELFLSNFYHSLGV--IHYRSCVETP 564          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5AWI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032126 PE=4 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.139e-109
Identity = 107/278 (38.49%), Postives = 164/278 (58.99%), Query Frame = 3
Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSM 2834
            VC+ +KSLYGLKQ  R W  + T+++ +  ++QS  D++LF K+Q G +  L++YVDD+V+TGND    K L+  L++ F+MKDL  LKYFLG+E+ R  +GIF +QRKY L+L+ ++G+ G +   TP+E+                                        HTRPD+ YA+  +SQ+M +P   H+N  + ++RY+KN+PG+GIL + + + Q I  + D D       R+S +G+   +G +L +WK KKQN VARSSAE ++R M
Sbjct:  741 VCKLKKSLYGLKQCPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKQHGKITALIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLSPLKYFLGIEVSRSSEGIFPSQRKYILDLLQETGMSGCQPVNTPIEE---------------------------------------AHTRPDLAYALSVVSQYMHNPGELHMNAVMSILRYLKNAPGKGILFAKTVNHQSIKVYTDVDWVGAVDDRRSTSGYFTFVGCNLVTWKSKKQNVVARSSAEAEFRGM 979          

HSP 2 Score: 165.622 bits (418), Expect = 6.139e-109
Identity = 125/385 (32.47%), Postives = 197/385 (51.17%), Query Frame = 2
Query:  788 GIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN--IQPNLSHL--KVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSS-------FPHDPLCCF-----SRIFKPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFI 1891
            GIIHQ+ C +TPQQNGV ERK+RHLLEV +     +K  +  WGE + +A Y IN +PSS ++ + P + L N  I P + +L  +V GC+ +       + K +  V+  VF+GY+  +KGY  ++  T+  ++  DV FHE    F  +  +    +  ++Q LD D+ HIS  + S               S     +    T +P  SS          DP         +R    P +  +     + +  ++ +SN++    L   N+ F++  S++  P S  E + +P    AM EE+ +L+ N TW +V  P  K  + C++   +KYKA   +E+FKARLVAKGY+Q  G+ Y +TF+ VAK+ TVR  +  AF+
Sbjct:  338 GIIHQTTCXNTPQQNGVAERKNRHLLEVVRTSLIAAKTPISXWGEAITSAAYXINRVPSSSINFQTPLQALTNVVIAPTVPNLPPRVXGCMAFVHLHKHQRTKLTSHVLQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHEDSVYFS-SESELQGKYHKEIQTLDYDY-HISKENESGQSELVNQEAGELDMSGQQFGSEDVFTEIPNQSSSVEGVLNLEPDPFMKRLPHRHNRGIPKPTYEPE-----LSTKVKYPMSNYVSNHRLSKSNKSFVNQLSTVAIPNSVQEVLVDPRWKAAMNEEMKSLQKNETWELVECPPGKKPVGCRWIYTVKYKADGSIEQFKARLVAKGYTQTXGIDYTETFALVAKINTVRFDVKNAFL 715          

HSP 3 Score: 92.4337 bits (228), Expect = 6.139e-109
Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = 3
Query:  360 LWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761
            LW+ RLGH     L  + F   F+  D     C +C LA+  R  F   + +S   F ++H D+WG  ++ T SG R+F+T +DD +RMTW+ L+K K E  L  K F  +++ Q++A ++  RSDN  ++ +S
Sbjct:  196 LWHRRLGHASFGYLKKL-FPSLFAKSDIYGFRCDICELAKSHRVSFPLILNKSPFAFMVIHSDVWGSSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFKNFHKMIETQYNAKVRVLRSDNDGEYQSS 328          

HSP 4 Score: 21.557 bits (44), Expect = 6.139e-109
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1
Query: 1942 DLCEEVYMELPTG 1980
            +L E+VYM+LP G
Sbjct:  718 ELSEKVYMDLPPG 730          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5BCC7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040650 PE=4 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.888e-105
Identity = 154/288 (53.47%), Postives = 201/288 (69.79%), Query Frame = 3
Query: 1998 NTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861
            N VC+ QKSLYGLKQASRQW  KLT AL    FQQS  DYSLFT ++G  V+ LL+YVDDL++ GND  + +  K  L++ F +K+LG+LKY LG+E+ R KDG+FL+QRKYAL +I + G+ GA+    P+E+N KL                 LL D  +Y+RL+GRL+YLT TRPD+TY VH LSQFMQ P+  HL+ A RVVRY+K  PGQGI+L + +  QL  + DSD  SCP++R+S++G C+KLG S  SW+ KKQ T++RSSAE +Y SMA  ASE+ W
Sbjct:  943 NKVCKLQKSLYGLKQASRQWFAKLTTALKEYGFQQSLADYSLFTYRRGNIVMNLLVYVDDLILAGNDNKVCEAFKNFLDRKFGIKNLGQLKYILGIEVARGKDGLFLSQRKYALNIIKECGLLGARPVEFPMEENHKLAL-----------ANGRLLNDPGMYRRLVGRLIYLTVTRPDLTYXVHVLSQFMQSPREEHLDAAYRVVRYLKKGPGQGIVLKADNDLQLYCYSDSDWXSCPLTRRSISGCCVKLGTSPISWRCKKQGTISRSSAEVEYXSMAMAASELTW 1219          

HSP 2 Score: 117.472 bits (293), Expect = 2.888e-105
Identity = 66/139 (47.48%), Postives = 92/139 (66.19%), Query Frame = 2
Query: 1520 NHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936
            N++ Y+     ++ FL+  +   EP++Y EAV +    +AM +EI  LE+N TW VV LP +K +I CK+  KIKY A   +ER+KARLVA+G++Q EG+ Y + FSPVAK+ +VR  LA+    RW L QMDV NAFL
Sbjct:  783 NYVTYTKFSVGHRAFLAXINIEKEPRTYKEAVXDNRWREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFL 921          

HSP 3 Score: 27.335 bits (59), Expect = 2.888e-105
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 1
Query: 1942 DLCEEVYMELPTGF 1983
            DL EEVYM+LP GF
Sbjct:  924 DLEEEVYMKLPEGF 937          

HSP 4 Score: 151.369 bits (381), Expect = 2.101e-61
Identity = 73/150 (48.67%), Postives = 100/150 (66.67%), Query Frame = 2
Query:  770 SLFTDLGIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYNIQPNLSHLKVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPF 1216
            S +   GI+ +S  V+TPQ NG  ERKH+H+L +A+ L+FQ+ + + FWGECV TA YLIN  P+ +L  K P+EIL+  +PN  HL+VFG LCYA  ++   DKF  +     F GY   +KG+ L +LETK  F +RDV FHE++FPF
Sbjct:  525 SFYKREGILRESSLVNTPQXNGRVERKHQHILNIARTLRFQACLPIDFWGECVLTAAYLINRTPTPILDGKTPYEILFGEKPNYEHLRVFGSLCYAHKKSRSNDKFDXRSRRCXFXGYPYGKKGWKLXDLETKEQFESRDVIFHETIFPF 674          

HSP 5 Score: 115.161 bits (287), Expect = 2.101e-61
Identity = 58/143 (40.56%), Postives = 78/143 (54.55%), Query Frame = 3
Query:  342 LDNNTSLWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNSTVL 770
            ++    LW+ RLGH     L  +  L +        + C  C   +Q R  F  S  R+ + F+L+H+DIWGPYR  T SG  YFLTIVDDHSR  W+YL+K KSE    L+ F  + K QF   +K  RSDNG +F    ++
Sbjct:  382 VEEKYELWHRRLGHPSDRVLASIHSLGNNVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIFNLIHVDIWGPYRTPTTSGAHYFLTIVDDHSRGVWIYLMKEKSETKDILQNFCFMTKTQFDKPVKCIRSDNGLEFCXGQMM 524          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5AWA1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043610 PE=4 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 1.729e-104
Identity = 156/292 (53.42%), Postives = 210/292 (71.92%), Query Frame = 3
Query: 1986 QSRGNTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861
            Q   N VCR  KSLYGLKQASRQW  K ++A+ SA + QS+ DYSLFT++QG +   LLIYVDD++ITGND V I   K  L+ +F +KDLG+LKYFLG+E+   K+GIF++QRKYALE+I D+G+ GA    TP+E+  KL+           +K D LL+D+  Y+RL+GRL+YLT +RPDITYAVH LS+FM  P+ +H+  A RVVRY+KN+PGQG+  SS++  +L  +CDSD A CP++R+S TG+C+ LG SL SW+ K+Q TV+ SSAE +YR+M     E+ W
Sbjct: 1122 QGEENLVCRLHKSLYGLKQASRQWFAKFSEAIQSAGYAQSRADYSLFTRKQGKSFTALLIYVDDILITGNDPVSIATTKKFLHSHFHLKDLGDLKYFLGIEVSASKNGIFISQRKYALEIIEDAGLLGAAPIDTPMERGLKLS-----------DKSD-LLKDQGRYRRLVGRLIYLTVSRPDITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRXYCDSDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTW 1401          

HSP 2 Score: 109.383 bits (272), Expect = 1.729e-104
Identity = 63/139 (45.32%), Postives = 93/139 (66.91%), Query Frame = 2
Query: 1520 NHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936
            N++ Y       + F++  S++ EP+SYSEA  +P   KAM  E+  L++N TW++ PLP  K+ I  ++  KIK+++   +ER+KARLVAKG++Q EG+ Y DTFSP AK+++VR +LALA      + QMDV NAFL
Sbjct:  965 NYVSYHRYKPAYRSFVAQHSAVTEPRSYSEAAAHPEWQKAMRSELQALQANGTWSLTPLPAGKTPIGYRWVYKIKHRSDGSIERYKARLVAKGFTQLEGVDYQDTFSPTAKIISVRCLLALAAARGXSIHQMDVNNAFL 1103          

HSP 3 Score: 175.252 bits (443), Expect = 6.080e-70
Identity = 84/149 (56.38%), Postives = 105/149 (70.47%), Query Frame = 2
Query:  770 SLFTDLGIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYNIQPNLSHLKVFGCLCYATQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPF 1216
            S F D G+I Q  CV+TPQQNGV ERKHRH+L+VA+ALKF ++V  +FWGEC  TA ++IN L S +L  K PFE+LY   P  SHL+VFGCL YAT      KF  + +PS+F+GY   QK Y LF+L TK  F +RDVKFHE +FP+
Sbjct:  652 SFFQDNGVIFQHSCVYTPQQNGVVERKHRHILQVARALKFHAQVPTQFWGECALTAVHIINRLXSPILSFKTPFELLYLKSPXYSHLRVFGCLAYATNVHTSHKFDYRAMPSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIFPY 800          

HSP 4 Score: 119.398 bits (298), Expect = 6.080e-70
Identity = 59/135 (43.70%), Postives = 80/135 (59.26%), Query Frame = 3
Query:  348 NNTSLWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKF 752
            ++T LW++RLGH                      ++C +CPLA+Q+R PF  S   S KPF+++H DIWG YR  +  G  YFLTIVDD++R TW++L++HK EA   LK+F   V  QF   IK FRSDN  +F
Sbjct:  533 SSTDLWHSRLGHS--------------------NNACPICPLAKQSRLPFGTSAISSTKPFEIIHCDIWGRYRHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFSYVFTQFEFRIKTFRSDNXXEF 647          
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5BCQ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025518 PE=4 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 1.189e-103
Identity = 141/292 (48.29%), Postives = 198/292 (67.81%), Query Frame = 3
Query: 1986 QSRGNTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861
            Q     VCR  KSLYGLKQASR W  K +  +    F QS+ DYSLFTK  G +   +LIYVDD++ITGNDE +I  LK  L+  F++KDLG+L+YFLG+E+ R  DGI ++QRKY L+++ ++G+ GAK  +TP+E+N KL     D           LL++ + Y+RL+G+L+YLT TRP+I+Y+VH LSQFMQ P+  HL+    ++RY+K +PGQG+   +  +  L  FCD+D A C ++R+SVTG+CI L  +  SWK KKQ TV+RSS E++YR+MA+   E+ W
Sbjct: 1084 QGETPMVCRLNKSLYGLKQASRSWFRKFSATIQQDGFHQSRADYSLFTKISGNSFTAVLIYVDDMIITGNDENVIAALKESLHTKFRIKDLGQLRYFLGIEVARSTDGISISQRKYTLDILDEAGLLGAKPLSTPMEENNKLLPTVGD-----------LLKNPSTYRRLVGQLIYLTITRPEISYSVHILSQFMQEPRKPHLHAVHHLLRYLKGAPGQGLYFPAKGNLLLRGFCDADWARCSITRRSVTGYCIFLXGAXISWKTKKQTTVSRSSXESEYRAMASITCELTW 1364          

HSP 2 Score: 127.102 bits (318), Expect = 1.189e-103
Identity = 70/139 (50.36%), Postives = 95/139 (68.35%), Query Frame = 2
Query: 1520 NHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936
             +I Y+ L    + F+ + ++LVEP +Y +AV +P   +AM  E+  LE N+TWT+ PLP     I CK+  KIKY +   VER+KARLVAKG++Q+EG+ Y +TFSPVAKL TVR +LA+A +  W L QMDV NAFL
Sbjct:  927 RYISYAQLSPKYRNFVCAITTLVEPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPYGHRPIGCKWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYKETFSPVAKLTTVRCLLAIAAVRHWSLHQMDVQNAFL 1065          

HSP 3 Score: 30.0314 bits (66), Expect = 1.189e-103
Identity = 14/23 (60.87%), Postives = 15/23 (65.22%), Query Frame = 1
Query: 1942 DLCEEVYMELPTGFCSQEGTLFV 2010
            DL EEVYM+LP GF  Q  T  V
Sbjct: 1068 DLLEEVYMQLPLGFRQQGETPMV 1090          

HSP 4 Score: 163.31 bits (412), Expect = 7.608e-70
Identity = 77/147 (52.38%), Postives = 101/147 (68.71%), Query Frame = 2
Query:  788 GIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYNIQPNLSHLKVFGCLCYATQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAP 1228
            GI +   C +TPQQNGV ERKHRHLL V +AL+FQ+ + LKFWGE ++TACYLIN LP+ +L +K P+++L N  P+  HL+ FGCLCYAT      KF  +    +F+GY   QKGY +++L T  FF + DV FHE +FPFH  P
Sbjct:  678 GINYHHSCAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLPTHKFDQRARRCIFVGYPLGQKGYRVYDLXTNKFFSSXDVVFHEHIFPFHTNP 824          

HSP 5 Score: 131.339 bits (329), Expect = 7.608e-70
Identity = 64/133 (48.12%), Postives = 87/133 (65.41%), Query Frame = 3
Query:  354 TSLWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKF 752
            + LW+ RLGH  S  L  +  +    + D+  H C +CPLA+QTR  F +S   S  PFDL+H DIWGP+RI++HSG  YFLTIVDDH+R TW++L+  KSE    L+ FI  V+ QF+  IK  R+DNG++ 
Sbjct:  536 SDLWHQRLGHPSSGPLQVLAKVNPKIYFDSK-HVCDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGAXYFLTIVDDHTRYTWIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEI 667          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
POLX_TOBAC9.325e-4933.90Retrovirus-related Pol polyprotein from transposon... [more]
M810_ARATH1.245e-4438.33Uncharacterized mitochondrial protein AtMg00810 OS... [more]
COPIA_DROME1.706e-4230.07Copia protein OS=Drosophila melanogaster GN=GIP PE... [more]
YCH4_YEAST5.184e-2329.05Putative transposon Ty5-1 protein YCL074W OS=Sacch... [more]
M240_ARATH2.885e-1649.37Uncharacterized mitochondrial protein AtMg00240 OS... [more]
M820_ARATH2.323e-1540.95Uncharacterized mitochondrial protein AtMg00820 OS... [more]
back to top
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A5B460_VITVI3.386e-13245.52Putative uncharacterized protein OS=Vitis vinifera... [more]
A5ACT8_VITVI6.845e-12644.25Putative uncharacterized protein OS=Vitis vinifera... [more]
A5AEE2_VITVI1.166e-12343.73Putative uncharacterized protein OS=Vitis vinifera... [more]
A5B887_VITVI1.789e-11643.37Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BQL8_VITVI1.128e-11234.25Putative uncharacterized protein (Fragment) OS=Vit... [more]
A5C6P3_VITVI3.188e-11152.43Putative uncharacterized protein OS=Vitis vinifera... [more]
A5AWI9_VITVI6.139e-10938.49Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BCC7_VITVI2.888e-10553.47Putative uncharacterized protein OS=Vitis vinifera... [more]
A5AWA1_VITVI1.729e-10453.42Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BCQ9_VITVI1.189e-10348.29Putative uncharacterized protein OS=Vitis vinifera... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 24..106
e-value: 3.1E-7
score: 30.0
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 120..199
e-value: 2.0E-12
score: 47.3
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 117..260
score: 11.168
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 117..201
e-value: 2.9E-14
score: 52.7
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 117..211
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 17..28
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 17..28
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 64..200
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 64..200
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 218..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..217

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092022 ID=g.barbadense_cottongen_reftransV1_0092022; Name=g.barbadense_cottongen_reftransV1_0092022; organism=Gossypium barbadense; type=contig; length=2863bp
GAACAAGGTCTCCTCTGTTGATTCTTCTGCGAATATAGCAGGTATATCCC
ACTGTCTTTCTGTTTCTGAGGATTCTCCTAGTTGGATACTGGATACGGGG
GCCACAGATCACATGATATCTGATTCTCAGAGTTTAATATCTCCAATTTC
TTGTGCTAGTGGTTCTGGCTTTGTTCATCTTCCTAATGGGTCTCTTCGAT
GGAAAGATGAAGGGGATTGGTAAAGAATCTCGCGGGTTATATTTGTTTGA
TTCTTCAAGTCTAGCTTCTAGTTTGTCTTTTCCAGTTTCTTCTGGCTCTC
ATTCGTTTAATATTCATTCTATTGATTGTATGCACTCTGTGCTCGATAAT
AATACGAGTCTTTGGTATGCTCGTTTAGGGCATGTGCCTTCTTCTAAGTT
GCATCATGTTCCTTTTCTACAATCTTTCTCCTTTGATGATAATTTGATTC
ATTCTTGTGCTGTGTGTCCTTTAGCTAGACAAACTCGTCAACCTTTCTCT
AATAGTGTGACTAGGTCTGCTAAGCCTTTTGATCTAGTTCATCTTGATAT
TTGGGGCCCTTATAGAATATCAACTCATAGTGGCCATAGATATTTTCTAA
CTATTGTGGATGATCATTCTAGGATGACCTGGGTATATTTGTTGAAGCAT
AAAAGTGAAGCTCTTCTTTACCTAAAACAATTCATTCACCTAGTTAAAAA
TCAATTTTCTGCTTTTATAAAATACTTCAGAAGTGATAACGGTTCTAAAT
TCTTCAATTCAACTGTTCTTCCCTGTTTACTGATTTGGGGATTATACATC
AAAGCTTATGTGTTCACACCCCTCAGCAAAATGGGGTTACTGAGAGGAAA
CACAGGCATCTCCTTGAGGTTGCTAAAGCACTCAAGTTTCAGTCTAAAGT
ACTGCTTAAATTTTGGGGTGAGTGTGTCAAAACTGCATGTTATTTGATAA
ATTAATTACCTTCTTCTGTTCTTCATAATAAATTTCCTTTTGAGATTCTT
TACAATATACAACCAAATCTCTCTCATCTCAAAGTTTTTGGCTGTCTCTG
TTATGCCACACAAACTCCTTACAAAGACAAATTCTCTCCCAAAGTTATAC
CTTCAGTCTTTATGGGGTATTCATCCACTCAAAAGGGATACATTCTGTTC
AATCTTGAAACAAAATCTTTTTTTGTTAATAGGGATGTGAAGTTTCATGA
ATCTGTTTTCCCTTTTCATTTTGCGCCTATAGACAGTTCTGTGTTTTTTC
CACCACAGTTGCAAATCTTGGATTCTGATTTTTTACACATTTCTCCTTCA
TCTAACTCTCCTTTACCACCTACATCTCCAGCTTCTAATCCAGCCTCTAC
ACCTTCATCCACTTCACCTTCTAATCCTTCTGCTTCAACAAGTGTCCCAG
GTTGTTCTTCTTTTCCACATGATCCTCTTTGCTGTTTCTCTCGAATTTTT
AAGCCACCGAATTGGTTACATGATTTTATCACTTCTACTGTTTTTTCTTC
TAGTCAGTTTTCTATTTCAAATCATATTTTTTATTCCCATTTGCCTACCC
ATAACCAGTTGTTTTTGTCCTCCACTTCTTCTTTGGTTGAACCTAAGTCC
TACTCTGAGGCTGTTCAGAATCCAGCCTAGATCAAAGCCATGGAAGAGGA
GATTTCTACTTTAGAATCAAATAACACCTGGACTGTGGTTCCTCTGCCTC
TGAAAAAGTCCTCAATTAGTTGTAAATTTTTTTGTAAGATCAAGTACAAG
GCGTCTAGTGAGGTGGAAAGGTTTAAGGCTCGCCTTGTGGCCAAAGGTTA
TAGTCAGAAGGAAGGTATGGGCTATGTGGACACTTTCTCTCCTGTTGCTA
AACTGGTAACTGTGAGAGTTGTTTTGGCGTTAGCCTTTATTTTTCGCTGG
CCCTTATTTCAGATGGATGTGTTCAATGCCTTCCTCCAAGTGATTTGTGT
GAGGAGGTTTATATGGAGTTGCCTACTGGTTTTTGCAGTCAAGAGGGAAC
ACTGTTTGTAGATTTCAAAAGTCTCTTTATGGGTTGAAGCAGGCGTCCAG
GCAATGGAATCTGAAGTTGACACAAGCATTGGTTTCTGCTAGATTTCAGC
AAAGTAAGTATGATTACTCTTTGTTTACAAAACAACAAGGAGGTAATGTA
GTTTTGTTACTCATTTATGTTGATGATTTGGTCATAACTGGAAATGATGA
GGTTTTGATCAAAGAGTTAAAAGGGATCCTAAATCAGAATTTTAAAATGA
AAGATTTAGGTGAGTTGAAATATTTCTTAGGATTGGAAATTCTGAGATTT
AAGGATGGAATATTTCTGAATCAGAGAAAATATGCCTTAGAATTAATTGC
AGACAGTGGGATAGGGGGAGCTAAGTCTGCCACAACCCCTCTTGAGCAAA
ATACAAAACTTACAGCAATCGAGTATGATCAAGGAATAGGACAAGAAGAG
AAAGAAGATTCATTATTGCAAGACAAGACTGTTTACCAGAGGCTAATAGG
AAGATTGCTATATTTAACACACACAAGGCCGGATATAACATATGCTGTTC
ATTGCTTGAGTCAATTCATGCAACATCCTAAGGTCTCACATCTGAATACT
GCACTAAGGGTGGTCAGATATATTAAAAACAGTCCTGGGCAGGGAATTTT
ATTAAGTTCTTCAAGCTCTTGTCAACTTATTACTTTTTGTGACTCGGATT
GCGCCTCATGTCCTATGTCCCGAAAGTCGGTCACAGGTTTTTGCATAAAG
CTGGGAAATTCCTTGACTTCTTGGAAAGTAAAGAAACAAAATACAGTCGC
AAGATCATCTGCAGAAACAAAATATAGAAGTATGGCAGCTACAGCTTCAG
AAATTGTTTGGCT
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR025724GAG-pre-integrase_dom
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding