g.barbadense_cottongen_reftransV1_0092022, g.barbadense_cottongen_reftransV1_0092022 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 9.325e-49 Identity = 99/292 (33.90%), Postives = 160/292 (54.79%), Query Frame = 3 Query: 1998 NTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQ-QGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDG--IFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLY-LTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861 + VC+ KSLYGLKQA RQW +K + S + ++ D ++ K+ N ++LL+YVDD++I G D+ LI +LKG L+++F MKDLG + LG++I+R + ++L+Q KY ++ + AK +TPL + KL+ + EEK + K Y +G L+Y + TRPDI +AV +S+F+++P H ++RY++ + G + S L + D+D A +RKS TG+ SW+ K Q VA S+ E +Y + T E++W Sbjct: 951 HMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV--EEKGN---MAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIW 1236 HSP 2 Score: 77.0258 bits (188), Expect = 9.325e-49 Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 2 Query: 1589 EPKSYSEAVQNPA*---IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936 EP+S E + +P +KAM+EE+ +L+ N T+ +V LP K + CK+ K+K ++ R+KARLV KG+ QK+G+ + + FSPV K+ ++R +L+LA + Q+DV AFL Sbjct: 810 EPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFL 928 HSP 3 Score: 26.1794 bits (56), Expect = 9.325e-49 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 1942 DLCEEVYMELPTGF 1983 DL EE+YME P GF Sbjct: 931 DLEEEIYMEQPEGF 944 HSP 4 Score: 105.145 bits (261), Expect = 1.355e-41 Identity = 57/140 (40.71%), Postives = 79/140 (56.43%), Query Frame = 2 Query: 788 GIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYNIQPNLSHLKVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHES 1204 GI H+ TPQ NGV ER +R ++E +++ +K+ FWGE V+TACYLIN PS L + P + N + + SHLKVFGC +A + K K IP +F+GY + GY L++ K +RDV F ES Sbjct: 568 GIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRES 707 HSP 5 Score: 88.9669 bits (219), Expect = 1.355e-41 Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 3 Query: 357 SLWYARLGHVPSSKLHHVPFLQSFSF-DDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKF 752 LW+ R+GH+ L + S+ + C C +Q R F S R DLV+ D+ GP I + G++YF+T +DD SR WVY+LK K + ++F LV+ + +K RSDNG ++ Sbjct: 423 DLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEY 555
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.245e-44 Identity = 87/227 (38.33%), Postives = 136/227 (59.91%), Query Frame = 3 Query: 2187 TGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPL--EQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861 TG+ L+ L L+ F MKDLG + YFLG++I G+FL+Q KYA +++ ++G+ K +TPL + N+ ++ +Y D + ++ ++G L YLT TRPDI+YAV+ + Q M P ++ + RV+RY+K + G+ + +S + FCDSD A C +R+S TGFC LG ++ SW K+Q TV+RSS ET+YR++A TA+E+ W Sbjct: 13 TGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY--------------PDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 1.706e-42 Identity = 89/296 (30.07%), Postives = 148/296 (50.00%), Query Frame = 3 Query: 1995 GNTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGG---NXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTH-TRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQ--LITFCDSDCASCPMSRKSVTGFCIKLGN-SLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861 + VC+ K++YGLKQA+R W QAL F S D ++ +G N+ +LL D ++ TG D + K L + F+M DL E+K+F+G+ I +D I+L+Q Y ++++ + + +TPL + D+ T + LIG L+Y+ TRPD+T AV+ LS++ RV+RY+K + ++ + + + +I + DSD A + RKS TG+ K+ + +L W K+QN+VA SS E +Y ++ E +W Sbjct: 1028 SDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATG-DMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN------------TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALW 1310 HSP 2 Score: 68.5514 bits (166), Expect = 1.706e-42 Identity = 37/101 (36.63%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 1634 KAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936 +A+ E++ + NNTWT+ P K+ + ++ +KY R+KARLVA+G++QK + Y +TF+PVA++ + R +L+L + + QMDV AFL Sbjct: 908 EAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFL 1008 HSP 3 Score: 21.9422 bits (45), Expect = 1.706e-42 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 1945 LCEEVYMELPTG 1980 L EE+YM LP G Sbjct: 1012 LKEEIYMRLPQG 1023 HSP 4 Score: 97.4413 bits (241), Expect = 2.193e-34 Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = 2 Query: 788 GIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVL--HNKFPFEILYNIQPNLSHLKVFGCLCYATQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDF 1282 GI + HTPQ NGV+ER R + E A+ + +K+ FWGE V TA YLIN +PS L +K P+E+ +N +P L HL+VFG Y + KF K S+F+GY G+ L++ + F V RDV E+ A +VF + + +F Sbjct: 568 GISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNF 732 HSP 5 Score: 72.4034 bits (176), Expect = 2.193e-34 Identity = 46/157 (29.30%), Postives = 71/157 (45.22%), Query Frame = 3 Query: 315 HSIDCMHSVLDNNTSLWYARLGHVPSSKLHHVPFLQSFS---FDDNLIHSCAVCPL---ARQTRQPFSN--SVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761 +SI+ H NN LW+ R GH+ KL + FS +NL SC +C +Q R PF T +P +VH D+ GP T YF+ VD + YL+K+KS+ + F+ + F+ + Y DNG ++ ++ Sbjct: 405 YSINAKHK---NNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSN 558
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 5.184e-23 Identity = 86/296 (29.05%), Postives = 142/296 (47.97%), Query Frame = 3 Query: 1980 FLQSRG-NTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDG-IFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHT-RPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKK-QNTVARSSAETKYRSMAATASEI 2855 F+ R + V +YGLKQA WN + L F + + ++ L+ + + + +YVDDL++ + +K L + + MKDLG++ FLGL I + +G I L+ + Y + ++S I K TPL + L E L+D T YQ ++G+LL+ +T RPDI+Y V LS+F++ P+ HL +A RV+RY+ + + S S L +CD+ + S G+ L + +W KK + + S E +Y + + T EI Sbjct: 24 FVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLF-----------ETTSPHLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASETVMEI 308
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: M240_ARATH (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana GN=AtMg00240 PE=4 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.885e-16 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 2508 LYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFC 2744 +YLT TRPD+T+AV+ LSQF + + + +V+ Y+K + GQG+ S++S QL F DSD ASCP +R+SVTGFC Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFC 79
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.323e-15 Identity = 43/105 (40.95%), Postives = 70/105 (66.67%), Query Frame = 2 Query: 1571 STSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALA 1885 +T+ EPKS A+++P +AM+EE+ L N TW +VP P+ ++ + CK+ K K + ++R KARLVAKG+ Q+EG+ +V+T+SPV + T+R +L +A Sbjct: 21 TTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5B460_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012765 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 3.386e-132 Identity = 127/279 (45.52%), Postives = 191/279 (68.46%), Query Frame = 3 Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMA 2837 VC+ +KSLYGLKQ+ R W + T+++ + ++QS D++LF K+Q G + L++YVDD+V+TGND K L+ L++ F+MKDLG LKYFLG+E+ R +GIFL+QRKYAL+L+ ++G+ G + TP+E+ KL +E +Q + DK YQRL+GRL+YL HTRPD+ YA+ +SQ+M +P H+N +R++RY+KN+PG+GIL + + + Q I + D+D R+S +G+ +G +L +WK KKQN VARSSAE ++R MA Sbjct: 829 VCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKQHGKITALIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLGPLKYFLGIEVSRSSEGIFLSQRKYALDLLQETGMSGCQPVNTPIEEGLKL-CVEPNQ----------VSTDKGRYQRLVGRLMYLAHTRPDLAYALSVVSQYMHNPGEQHMNAVMRILRYLKNAPGKGILFAKNVNHQSIEVYTDADWXGAVDDRRSTSGYFTFVGGNLVTWKSKKQNVVARSSAEAEFRGMA 1096 HSP 2 Score: 187.963 bits (476), Expect = 3.386e-132 Identity = 135/394 (34.26%), Postives = 206/394 (52.28%), Query Frame = 2 Query: 791 IIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN--IQPNLSHL--KVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSSFPHDPLCCFSRIF--KPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTH-----NQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936 IIHQ+ C +TPQQNGV ERK+RHLLEV +A +K + +WGE + +A YLIN +PSS ++ + P + L N + P + +L +VFGC+ + + K + + VF+GY+ +KGY ++ T+ ++ DV FHE F + + + ++Q LD D+ HIS + S S + T +P SS L F + P+ + I + + + +++ H N+ F++ S++ P S EA+ + M EE+ +L+ N TW +V P K + C++ +KYKA +ERFKARLVAKGY+Q G+ Y TF+PVAK+ TVRV+L+LA WPL Q DV N FL Sbjct: 412 IIHQTTCSNTPQQNGVAERKNRHLLEVVRASLIAAKTPISYWGEAITSAAYLINRVPSSSINFQTPLQALTNVVVAPTVPNLPPRVFGCVAFVHLHKHQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHEDSMYFS-SESELQGEYHKEIQTLDYDY-HISKENESGQSELVNQEAGELDMSGQQFGSEDVFTEIPNQSSSVEGVLNLEPDXFMKRLPHRHNRGIPKPTYEPELSTKVKYPMSNYVSNHRLSESNKSFVNQLSTVAIPNSVQEALADXRWKAXMNEEMKSLQKNETWELVECPPGKKPVGCRWIYTVKYKADGXIERFKARLVAKGYTQTYGIDYTXTFAPVAKINTVRVLLSLAANLDWPLQQFDVKNXFL 803 HSP 3 Score: 95.5153 bits (236), Expect = 3.386e-132 Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 360 LWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761 LW+ RL H L + F F+ D C +C LA+ F + +S PF ++H D+WGP ++ T SG R+F+T +DD +RMTW+ L+K K E L + F +++ Q++A ++ RSDNG ++ +S Sbjct: 269 LWHRRLXHASFGYLKKL-FPSXFAKSDISGFRCDICELAKSHXVSFPLILNKSPFPFMVIHSDVWGPSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFQXFHKMIETQYNAKVRVLRSDNGGEYQSS 401 HSP 4 Score: 22.7126 bits (47), Expect = 3.386e-132 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 1942 DLCEEVYMELPTG 1980 +L EEVYM+LP G Sbjct: 806 ELSEEVYMDLPPG 818
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5ACT8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007488 PE=4 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 6.845e-126 Identity = 127/287 (44.25%), Postives = 190/287 (66.20%), Query Frame = 3 Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861 VC+ +KSLYGLKQ+ R W + T+++ + ++QS D++LF K+Q G + L++YVDD+V+TGND K L+ L++ F+MKDLG LKYFLG+E+ R +GIFL+QRKYAL+L+ + G+ G + TP+E+ KL +E +Q + +K YQRL+GRL+YL HTRPD+ YA+ +S +M +P H+N +R++RY+KN+PG+GIL + + Q I + D D A R+S +G+ +G +L +WK K QN VARSSAE ++R MA E +W Sbjct: 756 VCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKQHGKITXLIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLGPLKYFLGIEVSRSSEGIFLSQRKYALDLLXEXGMSGCQPVNTPIEEGMKL-CVEXNQ----------VSTBKGRYQRLVGRLMYLAHTRPDLAYALSVVSXYMHNPGEQHMNAXMRILRYLKNAPGKGILFAKNVDHQSIEXYTDXDWAGAVDDRRSTSGYFTFVGGNLVTWKSKXQNXVARSSAEAEFRGMALGLCEALW 1031 HSP 2 Score: 173.711 bits (439), Expect = 6.845e-126 Identity = 134/392 (34.18%), Postives = 203/392 (51.79%), Query Frame = 2 Query: 791 IIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN--IQPNLSHL--KVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSSFPHDPLCCF-----SRIFKPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936 IIH + C +TPQQNGV ERK+RHLLEV +A +K + +WGE + +A YLIN +PSS ++ + P + L N + P + +L +VFGC+ + + K + + VF+GY+ +KGY ++ T+ ++ DV FHE F + + + ++Q LD D+ HI S S + P+ S+SV G + DP +R P + + T + S + ++ + S+ NQL S++ P S EA+ +P +K TW +V P K + C++ +KYKA +ERFKARLVAKGY+Q G+ Y +TF+PVAK+ T+RV+L+LA WPL Q DV NAFL Sbjct: 365 IIHXTTCSNTPQQNGVAERKNRHLLEVVRASLIAAKTXISYWGEAITSAAYLINRVPSSSINFQTPLQALTNXVVAPTVPNLXPRVFGCVAFVHLHKHQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHEDSMYFS-SESELQGEYHKEIQTLDYDY-HI------SEEDESGQSELVNQEVDVFTEIPNQSSSVEGVLNLEPDPFMKRLPHRHNRGIPKPTYEPELSTKVKYPMSNYVSTHRLSESNKSFVNQL-----STVAIPNSVQEALADPRRMK-------------TWELVECPPGKKPVGCRWIYTVKYKADGSIERFKARLVAKGYTQTYGIDYTETFAPVAKINTIRVLLSLAANLDWPLQQFDVKNAFL 730 HSP 3 Score: 89.7373 bits (221), Expect = 6.845e-126 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 456 CAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761 C +C L + R F + +S PF ++H D+WGP ++ T SG R+F+T +DD +RMTW+ L+K K E L + F ++ Q++A + RSDNG ++ +S Sbjct: 253 CDICELXKSHRASFPLILNKSPFPFMVIHSDVWGPSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFQXFHKXIETQYNAKXRVLRSDNGGEYXSS 354 HSP 4 Score: 22.7126 bits (47), Expect = 6.845e-126 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 1942 DLCEEVYMELPTG 1980 +L EEVYM+LP G Sbjct: 733 ELSEEVYMDLPPG 745
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5AEE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029183 PE=4 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.166e-123 Identity = 122/279 (43.73%), Postives = 186/279 (66.67%), Query Frame = 3 Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMA 2837 VC+ +KSLYGLKQ+ R W + T+++ + ++QS D++LF K+ G + L++YVDD+V+TGND K L+ L++ F+MKDLG LKYFLG+E+ R +GIFL+QRKYAL+L+ ++G+ G + T +E+ KL +E +Q + DK YQRL+GRL+YL +TRPD+ Y + +SQ+M + H+N +R++RY+KN+PG+GIL + + Q I + D+D R+S +G+ +G +L +WK KKQN VARSSAE ++R MA Sbjct: 668 VCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKXXGKITTLIVYVDDMVVTGNDPXERKXLQNYLSREFEMKDLGPLKYFLGIEVSRSSEGIFLSQRKYALDLLQETGMSGCQPINTSIEEGLKL-CVEPNQ----------VSTDKGRYQRLVGRLMYLAYTRPDLAYXLSVVSQYMHNXXEQHMNAVMRILRYLKNAPGKGILFAKNIDHQSIEVYTDADWXGAVDDRRSTSGYFTFVGGNLVTWKSKKQNVVARSSAEAEFRGMA 935 HSP 2 Score: 187.963 bits (476), Expect = 1.166e-123 Identity = 139/400 (34.75%), Postives = 206/400 (51.50%), Query Frame = 2 Query: 788 GIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN--IQPNLSHL--KVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSS-------FPHDPLC-----CFSRIFKPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936 GIIHQ+ C +TPQQNGV ERK+RHLLEV +A +K + +WGE + +A YLIN +PSS ++ + P + L N + P + +L +VFGC+ + + K + + VF+GY+ +KGY ++ T+ ++ DV FHE F + + + ++ LD D+ HIS S S + T +P SS DP +R P + + T + S + + + S+ NQL S++ P S EA+ +P AM EE+ +L+ N TW +V P K + C++ +KYKA +ERFKARLVAKGY+Q G+ Y +TF+ VAK+ TVRV+L+LA WPL Q DV N FL Sbjct: 250 GIIHQTTCSNTPQQNGVAERKNRHLLEVVRASVIAAKTPITYWGEAITSAAYLINRVPSSSINFQTPLQALTNAVVAPTVPNLPPRVFGCMAFVHLHKHQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHEDSMYFS-SESELXGEYHKEIXTLDYDY-HISEEDESGQSELVNQEVGELDMSGQQFGSEDVFTEIPNQSSSVEGVLNLEPDPFMKRLPHXHNRGIXKPTYEPELSTKVKYPXSNYVSNXRLSESNKSFVNQL-----STVXIPNSVXEALXDPRWKAAMNEEMKSLQKNETWELVECPPGKKPVGCRWIYTVKYKADGSIERFKARLVAKGYTQTYGIDYTETFAFVAKINTVRVLLSLAANLDWPLQQFDVKNVFL 642 HSP 3 Score: 79.337 bits (194), Expect = 1.166e-123 Identity = 35/102 (34.31%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 456 CAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761 C +C LA+ R F + +S+ PF ++H D+W P ++ T SG R+F+T +DD +RMTW+ L+K K++++A ++ RSDNG ++ +S Sbjct: 154 CXICELAKSHRASFPLILNKSSFPFMVIHSDVWXPSKVPTLSGSRWFVTFIDDCTRMTWLCLMK---------------TKDEYNAKVRVLRSDNGREYQSS 240 HSP 4 Score: 24.6386 bits (52), Expect = 1.166e-123 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 1942 DLCEEVYMELPTG 1980 +L EEVYM+LP G Sbjct: 645 ELSEEVYMDLPPG 657
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5B887_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018650 PE=4 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.789e-116 Identity = 121/279 (43.37%), Postives = 182/279 (65.23%), Query Frame = 3 Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMA 2837 VC+ +KSLYGLKQ+ R W + T+++ + ++QS D++L K+Q G + L++YVDD+V+TGND K L+ L++ F+MKDLG LKYFLG+E+ R +G FL+QRKYAL+L+ ++G+ G + T +E+ KL +E +Q + DK YQRL+GRL+YL HTRPD+ YA+ +SQ+M +P+ H+N +R++RY+KN+ G+GIL + + I + D D A R+S +G+ G +L WK KK N VA SSAE ++R MA Sbjct: 747 VCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLLLKKQHGKITTLIVYVDDMVVTGNDPKERKTLQNYLSREFEMKDLGLLKYFLGIEVSRSSEGNFLSQRKYALDLLQETGMSGCQLVNTSIEEGLKL-CVEPNQ----------VSTDKGRYQRLVGRLMYLAHTRPDLAYALSVVSQYMHNPREQHINAVMRILRYLKNAXGKGILFAKNVDHXSIEVYTDXDWAXAVDDRRSTSGYFTFXGGNLVXWKSKKXNVVAXSSAEXEFRGMA 1014 HSP 2 Score: 162.54 bits (410), Expect = 1.789e-116 Identity = 123/394 (31.22%), Postives = 197/394 (50.00%), Query Frame = 2 Query: 791 IIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN--IQPNLSHL--KVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSSFPHDPLCCFSRIF--KPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTH-----NQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936 IIHQ+ C +TPQQNGV ERK+RHLLEV +A +K + +WGE + + YLIN +PSS ++ + P + L N + P + +L +VFGC+ + + K + + VF+GY+ +KGY ++ T+ ++ DV FHE+ F + + ++Q LD D+ HIS S S + +P SS L F + P+ + I + + + +++ TH N+ F++ S++ P S +A+ +P AM EE+ +L+ N TW +V P K + C++ + +LVAKGY+Q G+ Y +TF+PVAK+ T++V+L+L WPL Q DV NAFL Sbjct: 343 IIHQTTCSNTPQQNGVVERKNRHLLEVVRASLIAAKTPISYWGEAITSVAYLINRVPSSSINFQTPLQALTNAVVAPTVPNLPPRVFGCVAFVHLHKHQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHENSMYFSXES-ELQGEYHKEIQTLDYDY-HISEKDESGQSELVNQEVGELDMSGQQFWSEDVFIEIPNQSSSVEGVLNLEPDPFMKRLPHRHNRGIPKPTYEPELSTKVKYPMSNYVSTHRFSESNKSFVNQLSTVTIPNSVQKALADPRWKAAMNEEMKSLQKNETWELVECPPGKKPVGCRWI-------------YTVKLVAKGYTQTYGIDYTETFAPVAKINTIQVLLSLTANLDWPLQQFDVKNAFL 721 HSP 3 Score: 98.5969 bits (244), Expect = 1.789e-116 Identity = 49/134 (36.57%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 360 LWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761 LW+ RLGH L + F F+ D C +C LA+ R F + +S PF ++H D+W P ++ T SG R+F+T +DD +RMTW+ L+K K E L ++F +++ Q++A ++ RSDNG ++ +S Sbjct: 200 LWHRRLGHASFGYLKKL-FPSLFAKSDISGFRCDICELAKSHRALFPLILNKSPFPFMVIHSDVWAPSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFQKFHKMIETQYNAKVRVLRSDNGGEYQSS 332 HSP 4 Score: 22.7126 bits (47), Expect = 1.789e-116 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 1942 DLCEEVYMELPTG 1980 +L EEVYM+LP G Sbjct: 724 ELSEEVYMDLPPG 736
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5BQL8_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_007668 PE=4 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.128e-112 Identity = 137/400 (34.25%), Postives = 208/400 (52.00%), Query Frame = 2 Query: 791 IIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN-----IQPNLSHLKVFGCLCYATQTPYK-DKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSS-------FPHDPLC-----CFSRIFKPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936 IIHQ+ C +TPQQNGV ERK+RHLLEV +A +K + +WG+ + +A YLIN +PSS ++ + P + L N PNL+ +VFGC+ + ++ K + + VF+ Y+ +KGY ++ + ++ DV FHE + F + + + ++Q LD D+ HIS S T +P SS DP C +R P + + T + + + ++ +F S N+ F++ S++ P S EA+ +P AM EE+ +L+ N TW V L K S+ C++ +KYKA +ERFKARLVAKGY+Q G+ Y TF+P+AK+ T+RV+L+LA WPL Q DV NAFL Sbjct: 205 IIHQTTCSNTPQQNGVAERKNRHLLEVVRASLIAAKTSISYWGKAITSATYLINRVPSSSINFQTPLQALTNAVVVPTVPNLT--RVFGCVAFVHLHKHQHTKLTSHALQCVFVRYALHKKGYRCYHPPIRRMYITMDVVFHEDLMYFS-SESELQGEYHKEIQTLDYDY-HISEEDEFGQSELVNQEVGELDMSGQKFGFEDVFTEIPNQSSSVEGVLNLEPDPFMKRLPHCHNRGIPKPTYEPELSTKVKYPMNNYVCNHRLFES-----NKSFVNQLSTVAIPNSVQEALDDPKWKAAMNEEMKSLQKNETWEFVECLLGKKSVGCRWIYTVKYKADGSIERFKARLVAKGYTQTYGIDYTKTFAPIAKINTIRVLLSLAANLDWPLQQFDVKNAFL 595 HSP 2 Score: 185.652 bits (470), Expect = 1.128e-112 Identity = 108/259 (41.70%), Postives = 167/259 (64.48%), Query Frame = 3 Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWK 2777 VC+ +KSLYGLKQ+ R W + T+++ + ++QS D++LF K+Q G + L++YVDD+V+TGND K L+ L++ F++KDLG LKYFLG+E+ R + IFL+QRKYAL+++ ++G+ G + T +E+ KL +E +Q + DK YQRL+GRL+YL HTRPD+ YA+ +SQ+M +P H+N + ++RY+KN+ G GIL + S Q I + D D R+S +G+ +G L SW+ Sbjct: 621 VCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKQHGKITTLIVYVDDMVVTGNDPEERKALQNYLSREFEIKDLGHLKYFLGIEVSRSSEEIFLSQRKYALDILQETGMSGCQPINTLIEEGLKL-CVEPNQ----------VSTDKGRYQRLVGRLMYLAHTRPDLAYALSVVSQYMHNPGEQHMNAVMCILRYLKNARGNGILFAKSVDHQSIEVYTDVDWIGVVDDRRSTSGYFTFVGGYL-SWQ 867 HSP 3 Score: 78.5666 bits (192), Expect = 1.128e-112 Identity = 44/136 (32.35%), Postives = 71/136 (52.21%), Query Frame = 3 Query: 360 LWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNSTV 767 LW+ RLGH L + F F+ D C +C LA+ R F + +S PF ++H D+WGP ++ T SG R+F+T +DD+ E L + F +++ Q++A ++ RSDNG ++ NS + Sbjct: 75 LWHRRLGHASFGYLKKL-FPSLFAKSDISGFRCDICELAKSHRASFLLILNKSLFPFMVIHSDVWGPSKVPTLSGSRWFVTFIDDY-------------EVNLLFQNFHKMIETQYNAKVRVLRSDNGGEYQNSNL 196 HSP 4 Score: 23.483 bits (49), Expect = 1.128e-112 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 1942 DLCEEVYMELPTG 1980 +L EEVYM+LP G Sbjct: 598 ELSEEVYMDLPLG 610
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5C6P3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018454 PE=4 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 3.188e-111 Identity = 151/288 (52.43%), Postives = 202/288 (70.14%), Query Frame = 3 Query: 1998 NTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861 N VC KSLYGLKQASRQW K + A++ F QS D+SLF K G + LL+YVDD++I N++ I +LK LN+ FK+KDLG++KYFLGLEI + GI ++QRKY L+L++D G G K+A+TP+E N KL+ D+G+ L D ++Y+RL+G+LLYLT TRPDI+Y V LSQF+ PK+ HL+ A R++RY+K +PG G+ S+S L+ + DSD A CP SR+SVTGFC+ LGNSL SWK KKQ+ V+RSSAE +YR+MA T+ EI W Sbjct: 890 NAVCLLHKSLYGLKQASRQWFSKFSTAIMGLGFSQSPSDHSLFIKNVDGLFIALLVYVDDVIIASNNQGAIADLKSELNKLFKLKDLGDVKYFLGLEIAKSSTGICVSQRKYVLDLLSDFGYLGCKAASTPMEANVKLSM---DEGVD--------LPDVSLYRRLLGKLLYLTLTRPDISYVVGRLSQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSELXLMAYTDSDWARCPDSRRSVTGFCVFLGNSLVSWKSKKQHIVSRSSAEAEYRAMANTSCEITW 1166 HSP 2 Score: 167.933 bits (424), Expect = 3.188e-111 Identity = 121/323 (37.46%), Postives = 177/323 (54.80%), Query Frame = 2 Query: 1004 NIQPNLSHLKVFGCLCY-ATQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSSFP---HDPLCCFSRIFKPPNWLHDX--XXXXXXXXXXXXXXNH-----IFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFLQ 1939 ++ P+ SHL+VFGCLCY +T + KFSP+ +VF+GY KGY L ++ET+S ++R+V FHE +FPF S P + SD H + N +S+ +P S P P +R+ K P++L D+ + + ++H + Y L +LF S S + EP S+++A + P AM+ E+ LE N TW++V L + K + CK+ KIK+KA +ER+KARLVAKGY+Q+EG+ YVDTFSPVAKLVTV+++LA+A + W L Q+DV NAFL Sbjct: 568 SVLPDYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIETRSISISRNVIFHEEIFPF-------SKTNPCSSPDISSDLFH------------------DRVLPCIAADNDQSSSVLPRVVSQPPLQVAPSSRXTRVSKQPSYLKDYHCSLINSVAHVETHSTSHPIQHFLSYDKLSPSYKLFSLSVSIISEPSSFAKAAEIPEWRAAMDCELEALEENKTWSIVSLXVGKHPVGCKWVYKIKHKADGTIERYKARLVAKGYTQREGIDYVDTFSPVAKLVTVKLLLAIAAVKGWHLSQLDVNNAFLH 865 HSP 3 Score: 26.5646 bits (57), Expect = 3.188e-111 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 1942 DLCEEVYMELPTGF 1983 DL EEVYM+LP G+ Sbjct: 867 DLNEEVYMKLPPGY 880 HSP 4 Score: 129.028 bits (323), Expect = 4.845e-27 Identity = 69/160 (43.12%), Postives = 98/160 (61.25%), Query Frame = 3 Query: 348 NNTSLWYARLGHVPSSKLHHVPFLQSF--SFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNSTVLPCLLIWGLYIKAYVFTP 821 N SLW++RLGH S+L + + F SFD + C VCPLA+Q P+ + R + FDL+HLDIWGP+ + + G+++FLTIVDD+SR+TWVY+LK+KSE Y+ F VK QF +K RSDN + F S L + ++ ++ V TP Sbjct: 410 NILSLWHSRLGHPSFSRLKGLQSVLDFDSSFD---LTPCXVCPLAKQRCLPYISLNKRCSSTFDLLHLDIWGPFSVGSVEGYKFFLTIVDDYSRVTWVYMLKNKSEVQKYIPDFFAFVKKQFGKEVKAIRSDNAPELFLSNFYHSLGV--IHYRSCVETP 564
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5AWI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032126 PE=4 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 6.139e-109 Identity = 107/278 (38.49%), Postives = 164/278 (58.99%), Query Frame = 3 Query: 2004 VCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLI-TFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSM 2834 VC+ +KSLYGLKQ R W + T+++ + ++QS D++LF K+Q G + L++YVDD+V+TGND K L+ L++ F+MKDL LKYFLG+E+ R +GIF +QRKY L+L+ ++G+ G + TP+E+ HTRPD+ YA+ +SQ+M +P H+N + ++RY+KN+PG+GIL + + + Q I + D D R+S +G+ +G +L +WK KKQN VARSSAE ++R M Sbjct: 741 VCKLKKSLYGLKQCPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKQHGKITALIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLSPLKYFLGIEVSRSSEGIFPSQRKYILDLLQETGMSGCQPVNTPIEE---------------------------------------AHTRPDLAYALSVVSQYMHNPGELHMNAVMSILRYLKNAPGKGILFAKTVNHQSIKVYTDVDWVGAVDDRRSTSGYFTFVGCNLVTWKSKKQNVVARSSAEAEFRGM 979 HSP 2 Score: 165.622 bits (418), Expect = 6.139e-109 Identity = 125/385 (32.47%), Postives = 197/385 (51.17%), Query Frame = 2 Query: 788 GIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYN--IQPNLSHL--KVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAPIDSSVFFPPQLQILDSDFLHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGCSS-------FPHDPLCCF-----SRIFKPPNWLHDXXXXXXXXXXXXXXXNHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFI 1891 GIIHQ+ C +TPQQNGV ERK+RHLLEV + +K + WGE + +A Y IN +PSS ++ + P + L N I P + +L +V GC+ + + K + V+ VF+GY+ +KGY ++ T+ ++ DV FHE F + + + ++Q LD D+ HIS + S S + T +P SS DP +R P + + + + ++ +SN++ L N+ F++ S++ P S E + +P AM EE+ +L+ N TW +V P K + C++ +KYKA +E+FKARLVAKGY+Q G+ Y +TF+ VAK+ TVR + AF+ Sbjct: 338 GIIHQTTCXNTPQQNGVAERKNRHLLEVVRTSLIAAKTPISXWGEAITSAAYXINRVPSSSINFQTPLQALTNVVIAPTVPNLPPRVXGCMAFVHLHKHQRTKLTSHVLQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHEDSVYFS-SESELQGKYHKEIQTLDYDY-HISKENESGQSELVNQEAGELDMSGQQFGSEDVFTEIPNQSSSVEGVLNLEPDPFMKRLPHRHNRGIPKPTYEPE-----LSTKVKYPMSNYVSNHRLSKSNKSFVNQLSTVAIPNSVQEVLVDPRWKAAMNEEMKSLQKNETWELVECPPGKKPVGCRWIYTVKYKADGSIEQFKARLVAKGYTQTXGIDYTETFALVAKINTVRFDVKNAFL 715 HSP 3 Score: 92.4337 bits (228), Expect = 6.139e-109 Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 360 LWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNS 761 LW+ RLGH L + F F+ D C +C LA+ R F + +S F ++H D+WG ++ T SG R+F+T +DD +RMTW+ L+K K E L K F +++ Q++A ++ RSDN ++ +S Sbjct: 196 LWHRRLGHASFGYLKKL-FPSLFAKSDIYGFRCDICELAKSHRVSFPLILNKSPFAFMVIHSDVWGSSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFKNFHKMIETQYNAKVRVLRSDNDGEYQSS 328 HSP 4 Score: 21.557 bits (44), Expect = 6.139e-109 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 1942 DLCEEVYMELPTG 1980 +L E+VYM+LP G Sbjct: 718 ELSEKVYMDLPPG 730
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5BCC7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040650 PE=4 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 2.888e-105 Identity = 154/288 (53.47%), Postives = 201/288 (69.79%), Query Frame = 3 Query: 1998 NTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861 N VC+ QKSLYGLKQASRQW KLT AL FQQS DYSLFT ++G V+ LL+YVDDL++ GND + + K L++ F +K+LG+LKY LG+E+ R KDG+FL+QRKYAL +I + G+ GA+ P+E+N KL LL D +Y+RL+GRL+YLT TRPD+TY VH LSQFMQ P+ HL+ A RVVRY+K PGQGI+L + + QL + DSD SCP++R+S++G C+KLG S SW+ KKQ T++RSSAE +Y SMA ASE+ W Sbjct: 943 NKVCKLQKSLYGLKQASRQWFAKLTTALKEYGFQQSLADYSLFTYRRGNIVMNLLVYVDDLILAGNDNKVCEAFKNFLDRKFGIKNLGQLKYILGIEVARGKDGLFLSQRKYALNIIKECGLLGARPVEFPMEENHKLAL-----------ANGRLLNDPGMYRRLVGRLIYLTVTRPDLTYXVHVLSQFMQSPREEHLDAAYRVVRYLKKGPGQGIVLKADNDLQLYCYSDSDWXSCPLTRRSISGCCVKLGTSPISWRCKKQGTISRSSAEVEYXSMAMAASELTW 1219 HSP 2 Score: 117.472 bits (293), Expect = 2.888e-105 Identity = 66/139 (47.48%), Postives = 92/139 (66.19%), Query Frame = 2 Query: 1520 NHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936 N++ Y+ ++ FL+ + EP++Y EAV + +AM +EI LE+N TW VV LP +K +I CK+ KIKY A +ER+KARLVA+G++Q EG+ Y + FSPVAK+ +VR LA+ RW L QMDV NAFL Sbjct: 783 NYVTYTKFSVGHRAFLAXINIEKEPRTYKEAVXDNRWREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFL 921 HSP 3 Score: 27.335 bits (59), Expect = 2.888e-105 Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 1942 DLCEEVYMELPTGF 1983 DL EEVYM+LP GF Sbjct: 924 DLEEEVYMKLPEGF 937 HSP 4 Score: 151.369 bits (381), Expect = 2.101e-61 Identity = 73/150 (48.67%), Postives = 100/150 (66.67%), Query Frame = 2 Query: 770 SLFTDLGIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYNIQPNLSHLKVFGCLCYA-TQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPF 1216 S + GI+ +S V+TPQ NG ERKH+H+L +A+ L+FQ+ + + FWGECV TA YLIN P+ +L K P+EIL+ +PN HL+VFG LCYA ++ DKF + F GY +KG+ L +LETK F +RDV FHE++FPF Sbjct: 525 SFYKREGILRESSLVNTPQXNGRVERKHQHILNIARTLRFQACLPIDFWGECVLTAAYLINRTPTPILDGKTPYEILFGEKPNYEHLRVFGSLCYAHKKSRSNDKFDXRSRRCXFXGYPYGKKGWKLXDLETKEQFESRDVIFHETIFPF 674 HSP 5 Score: 115.161 bits (287), Expect = 2.101e-61 Identity = 58/143 (40.56%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 342 LDNNTSLWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKFFNSTVL 770 ++ LW+ RLGH L + L + + C C +Q R F S R+ + F+L+H+DIWGPYR T SG YFLTIVDDHSR W+YL+K KSE L+ F + K QF +K RSDNG +F ++ Sbjct: 382 VEEKYELWHRRLGHPSDRVLASIHSLGNNVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIFNLIHVDIWGPYRTPTTSGAHYFLTIVDDHSRGVWIYLMKEKSETKDILQNFCFMTKTQFDKPVKCIRSDNGLEFCXGQMM 524
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5AWA1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043610 PE=4 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 1.729e-104 Identity = 156/292 (53.42%), Postives = 210/292 (71.92%), Query Frame = 3 Query: 1986 QSRGNTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861 Q N VCR KSLYGLKQASRQW K ++A+ SA + QS+ DYSLFT++QG + LLIYVDD++ITGND V I K L+ +F +KDLG+LKYFLG+E+ K+GIF++QRKYALE+I D+G+ GA TP+E+ KL+ +K D LL+D+ Y+RL+GRL+YLT +RPDITYAVH LS+FM P+ +H+ A RVVRY+KN+PGQG+ SS++ +L +CDSD A CP++R+S TG+C+ LG SL SW+ K+Q TV+ SSAE +YR+M E+ W Sbjct: 1122 QGEENLVCRLHKSLYGLKQASRQWFAKFSEAIQSAGYAQSRADYSLFTRKQGKSFTALLIYVDDILITGNDPVSIATTKKFLHSHFHLKDLGDLKYFLGIEVSASKNGIFISQRKYALEIIEDAGLLGAAPIDTPMERGLKLS-----------DKSD-LLKDQGRYRRLVGRLIYLTVSRPDITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRXYCDSDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTW 1401 HSP 2 Score: 109.383 bits (272), Expect = 1.729e-104 Identity = 63/139 (45.32%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 1520 NHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936 N++ Y + F++ S++ EP+SYSEA +P KAM E+ L++N TW++ PLP K+ I ++ KIK+++ +ER+KARLVAKG++Q EG+ Y DTFSP AK+++VR +LALA + QMDV NAFL Sbjct: 965 NYVSYHRYKPAYRSFVAQHSAVTEPRSYSEAAAHPEWQKAMRSELQALQANGTWSLTPLPAGKTPIGYRWVYKIKHRSDGSIERYKARLVAKGFTQLEGVDYQDTFSPTAKIISVRCLLALAAARGXSIHQMDVNNAFL 1103 HSP 3 Score: 175.252 bits (443), Expect = 6.080e-70 Identity = 84/149 (56.38%), Postives = 105/149 (70.47%), Query Frame = 2 Query: 770 SLFTDLGIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYNIQPNLSHLKVFGCLCYATQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPF 1216 S F D G+I Q CV+TPQQNGV ERKHRH+L+VA+ALKF ++V +FWGEC TA ++IN L S +L K PFE+LY P SHL+VFGCL YAT KF + +PS+F+GY QK Y LF+L TK F +RDVKFHE +FP+ Sbjct: 652 SFFQDNGVIFQHSCVYTPQQNGVVERKHRHILQVARALKFHAQVPTQFWGECALTAVHIINRLXSPILSFKTPFELLYLKSPXYSHLRVFGCLAYATNVHTSHKFDYRAMPSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIFPY 800 HSP 4 Score: 119.398 bits (298), Expect = 6.080e-70 Identity = 59/135 (43.70%), Postives = 80/135 (59.26%), Query Frame = 3 Query: 348 NNTSLWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKF 752 ++T LW++RLGH ++C +CPLA+Q+R PF S S KPF+++H DIWG YR + G YFLTIVDD++R TW++L++HK EA LK+F V QF IK FRSDN +F Sbjct: 533 SSTDLWHSRLGHS--------------------NNACPICPLAKQSRLPFGTSAISSTKPFEIIHCDIWGRYRHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFSYVFTQFEFRIKTFRSDNXXEF 647
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Match: A5BCQ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025518 PE=4 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 1.189e-103 Identity = 141/292 (48.29%), Postives = 198/292 (67.81%), Query Frame = 3 Query: 1986 QSRGNTVCRFQKSLYGLKQASRQWNLKLTQALVSARFQQSKYDYSLFTKQQGGNXXXXXXXXXXXXXTGNDEVLIKELKGILNQNFKMKDLGELKYFLGLEILRFKDGIFLNQRKYALELIADSGIGGAKSATTPLEQNTKLTAIEYDQGIGQEEKEDSLLQDKTVYQRLIGRLLYLTHTRPDITYAVHCLSQFMQHPKVSHLNTALRVVRYIKNSPGQGIXXXXXXXCQLITFCDSDCASCPMSRKSVTGFCIKLGNSLTSWKVKKQNTVARSSAETKYRSMAATASEIVW 2861 Q VCR KSLYGLKQASR W K + + F QS+ DYSLFTK G + +LIYVDD++ITGNDE +I LK L+ F++KDLG+L+YFLG+E+ R DGI ++QRKY L+++ ++G+ GAK +TP+E+N KL D LL++ + Y+RL+G+L+YLT TRP+I+Y+VH LSQFMQ P+ HL+ ++RY+K +PGQG+ + + L FCD+D A C ++R+SVTG+CI L + SWK KKQ TV+RSS E++YR+MA+ E+ W Sbjct: 1084 QGETPMVCRLNKSLYGLKQASRSWFRKFSATIQQDGFHQSRADYSLFTKISGNSFTAVLIYVDDMIITGNDENVIAALKESLHTKFRIKDLGQLRYFLGIEVARSTDGISISQRKYTLDILDEAGLLGAKPLSTPMEENNKLLPTVGD-----------LLKNPSTYRRLVGQLIYLTITRPEISYSVHILSQFMQEPRKPHLHAVHHLLRYLKGAPGQGLYFPAKGNLLLRGFCDADWARCSITRRSVTGYCIFLXGAXISWKTKKQTTVSRSSXESEYRAMASITCELTW 1364 HSP 2 Score: 127.102 bits (318), Expect = 1.189e-103 Identity = 70/139 (50.36%), Postives = 95/139 (68.35%), Query Frame = 2 Query: 1520 NHIFYSHLPTHNQLFLSSTSSLVEPKSYSEAVQNPA*IKAMEEEISTLESNNTWTVVPLPLXXXXXXXXXXXXXXYKASSEVERFKARLVAKGYSQKEGMGYVDTFSPVAKLVTVRVVLALAFIFRWPLFQMDVFNAFL 1936 +I Y+ L + F+ + ++LVEP +Y +AV +P +AM E+ LE N+TWT+ PLP I CK+ KIKY + VER+KARLVAKG++Q+EG+ Y +TFSPVAKL TVR +LA+A + W L QMDV NAFL Sbjct: 927 RYISYAQLSPKYRNFVCAITTLVEPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPYGHRPIGCKWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYKETFSPVAKLTTVRCLLAIAAVRHWSLHQMDVQNAFL 1065 HSP 3 Score: 30.0314 bits (66), Expect = 1.189e-103 Identity = 14/23 (60.87%), Postives = 15/23 (65.22%), Query Frame = 1 Query: 1942 DLCEEVYMELPTGFCSQEGTLFV 2010 DL EEVYM+LP GF Q T V Sbjct: 1068 DLLEEVYMQLPLGFRQQGETPMV 1090 HSP 4 Score: 163.31 bits (412), Expect = 7.608e-70 Identity = 77/147 (52.38%), Postives = 101/147 (68.71%), Query Frame = 2 Query: 788 GIIHQSLCVHTPQQNGVTERKHRHLLEVAKALKFQSKVLLKFWGECVKTACYLIN*LPSSVLHNKFPFEILYNIQPNLSHLKVFGCLCYATQTPYKDKFSPKVIPSVFMGYSSTQKGYILFNLETKSFFVNRDVKFHESVFPFHFAP 1228 GI + C +TPQQNGV ERKHRHLL V +AL+FQ+ + LKFWGE ++TACYLIN LP+ +L +K P+++L N P+ HL+ FGCLCYAT KF + +F+GY QKGY +++L T FF + DV FHE +FPFH P Sbjct: 678 GINYHHSCAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLPTHKFDQRARRCIFVGYPLGQKGYRVYDLXTNKFFSSXDVVFHEHIFPFHTNP 824 HSP 5 Score: 131.339 bits (329), Expect = 7.608e-70 Identity = 64/133 (48.12%), Postives = 87/133 (65.41%), Query Frame = 3 Query: 354 TSLWYARLGHVPSSKLHHVPFLQSFSFDDNLIHSCAVCPLARQTRQPFSNSVTRSAKPFDLVHLDIWGPYRISTHSGHRYFLTIVDDHSRMTWVYLLKHKSEALLYLKQFIHLVKNQFSAFIKYFRSDNGSKF 752 + LW+ RLGH S L + + + D+ H C +CPLA+QTR F +S S PFDL+H DIWGP+RI++HSG YFLTIVDDH+R TW++L+ KSE L+ FI V+ QF+ IK R+DNG++ Sbjct: 536 SDLWHQRLGHPSSGPLQVLAKVNPKIYFDSK-HVCDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGAXYFLTIVDDHTRYTWIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEI 667 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 6
BLAST of g.barbadense_cottongen_reftransV1_0092022 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092022 ID=g.barbadense_cottongen_reftransV1_0092022; Name=g.barbadense_cottongen_reftransV1_0092022; organism=Gossypium barbadense; type=contig; length=2863bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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