Li2

Name	Li2
Alias	N/A
GRIN ID	N/A
Type	Genetic Stock
Species	Gossypium hirsutum
Description	Ligon Lintless-2 mutant plant, homozygous dominant (Li2Li2)
Origin Country	N/A
Origin Detail	N/A
Pedigree	Mutant Texas marker-1 (TM-1) cotton plants containing the Li 2 gene were crossed with the Upland cotton variety DP5690 and F 1 progeny were backcrossed for five generations (BC 5) by SSD to DP5690 which served as the recurrent parent in each backcross. The DP5690 recurrent parent was a pure inbred line that was self- pollinated for nine generations via SSD. Progeny in each backcross were selected based on phenotype for the Li 2 short-fiber mutation.
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	Li2 x DP5690, F2
Paternal Parent of	N/A
Phenotypic Data	N/A
SSR Genotype Data	N/A
SNP Genotype Data	[view all 63056]
Map	[view all 1]
DNA Library	N/A
Sequence	N/A
Comments	image pedigree
Reference	Hinchliffe DJ, Turley RB, Naoumkina M, Kim HJ, Tang Y, Yeater KM, Li P, Fang DD. A combined functional and structural genomics approach identified an EST-SSR marker with complete linkage to the Ligon lintless-2 genetic locus in cotton (Gossypium hirsutum L.). BMC genomics. 2011.

Synonym
Ligon Lintless-2 mutant

Name	Type	PopulationType	Genome Group
Li2 x DP5690, F2 (2011)	genetic	F2	AD

Year	Publication
2011	Hinchliffe DJ, Turley RB, Naoumkina M, Kim HJ, Tang Y, Yeater KM, Li P, Fang DD. A combined functional and structural genomics approach identified an EST-SSR marker with complete linkage to the Ligon lintless-2 genetic locus in cotton (Gossypium hirsutum L.). BMC genomics. 2011. 12-445

#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0016	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0020	A/C	C
3	TAMU_SNP63K_genotype	USDA_SNP0022	T/C	T
4	TAMU_SNP63K_genotype	USDA_SNP0026	G/T	G
5	TAMU_SNP63K_genotype	USDA_SNP0027	A/G	A
6	TAMU_SNP63K_genotype	USDA_SNP0039	C/T	T
7	TAMU_SNP63K_genotype	USDA_SNP0049	A/C	M
8	TAMU_SNP63K_genotype	USDA_SNP0057	C/T	C
9	TAMU_SNP63K_genotype	USDA_SNP0064	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0070	C/T	C
11	TAMU_SNP63K_genotype	USDA_SNP0073	A/G	G
12	TAMU_SNP63K_genotype	USDA_SNP0074	A/G	A
13	TAMU_SNP63K_genotype	USDA_SNP0075	A/G	G
14	TAMU_SNP63K_genotype	USDA_SNP0076	A/C	A
15	TAMU_SNP63K_genotype	USDA_SNP0077	A/G	G
16	TAMU_SNP63K_genotype	USDA_SNP0084	A/C	-
17	TAMU_SNP63K_genotype	USDA_SNP0085	C/T	-
18	TAMU_SNP63K_genotype	USDA_SNP0092	C/T	T
19	TAMU_SNP63K_genotype	USDA_SNP0102	C/T	C
20	TAMU_SNP63K_genotype	USDA_SNP0107	A/C	A
21	TAMU_SNP63K_genotype	USDA_SNP0109	A/C	C
22	TAMU_SNP63K_genotype	USDA_SNP0111	G/T	T
23	TAMU_SNP63K_genotype	USDA_SNP0121	A/G	A
24	TAMU_SNP63K_genotype	USDA_SNP0134	A/C	C
25	TAMU_SNP63K_genotype	USDA_SNP0136	G/T	T