HAU0877, HAU0877 (genetic_marker) gossypium spp | Cottongen

Marker Overview

Marker Overview


Name	HAU0877
Alias	TA20264_3635
Genbank ID	N/A
Type	SSR
Species	Gossypium spp.
Source Type	EST
Repeat Motif	(TGTA)11
PCR Condition	Annealing temperature: 56.8
Primer 1	HAU0877_F: CGGTTAAGCTTCCAGACATT
Primer 2	HAU0877_R: AGAATCTGCAACCACATTGA
Product Length	228
Publication	[view all]
Comment	Primer data obtained in 2012

Publications


Year	Publication
2011	Yu Y, Yuan D, Liang S, Li X, Wang X, Lin Z, Zhang X. Genome structure of cotton revealed by a genome-wide SSR genetic map constructed from a BC1 population between gossypium hirsutum and G. barbadense. BMC genomics. 2011; 12:15

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)	AD_ch02_At.02	N/A	9.1	HAU0877	View
2	Yumian-1 x T586, RIL (2015)	AD_ch02_At.02	N/A	131.7	HAU0877	View
3	Yumian-1 x 7235, RIL (2015)	AD_ch02_At.02	N/A	98.4	HAU0877	View
4	CCRI 12-4 x (AD)5-7, F2 (2015)	AD_ch02_At.02	N/A	176	HAU0877	View
5	CCRI-35 x Yumian-1, RIL (2015)	AD_ch02_At.02	N/A	1.9	HAU0877	View
6	0-153 x sGK9708, RIL (2016)	AD_ch02_At.02	N/A	55.5	HAU877b	View
7	0-153 x sGK9708, RIL (2016)	AD_ch02_At.02	N/A	56.2	HAU877a	View
8	CCRI-35 x Yumian-1, RIL (2017)	AD_ch02_At.02	N/A	119.12	HAU0877	View